ID:

dwi_3734

 Coordinate:

scf2_1100000004954:3801267-3801417 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.2 -1.0

Flybase annnotation

exon [dwil_GLEANR_6226:3]; CDS [Dwil\GK22960-cds]; intron [Dwil\GK22960-in]; intron [Dwil\GK22960-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-37_DWil-LTRLTRGypsy+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#####---------------------------------------------
AGTACAAATTTGCAATGACTCCTAGGGGTTGCTCCAAGAACTTAGAAATCTATTCAAACAGACCACCACCTCACCTATCCACCTCGCCGCCATCCTGAATTCTCTAAAACTGTCCTATAGACACGGCTGCCTTTTTCTTTTTCTCCCATTAGAAAGCATTCCCTTAGCAACAGGAGAATATTTATTACTTCATTTGCATAGATAAAGTGAGTTTTCATATCTCTCACCCACAGAAGCTGCTCAAGAGAGGC
*****************************************************.........................................................((((.....))))******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTGC........... 27 0 1 91.00 91 35 56 0 0
...............................................................................................TGAATTCTCTAAAACTGTCCTATAGACA................................................................................................................................ 28 0 1 54.00 54 52 2 0 0
..TACAAATTTGCAATGACTCCTAGGGGT.............................................................................................................................................................................................................................. 27 0 1 53.00 53 4 49 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATA................................ 25 0 1 52.00 52 12 39 0 1
.....................................................TCAAACAGACCACCACCTCACCTA.............................................................................................................................................................................. 24 0 1 35.00 35 29 6 0 0
.............................TGCTCCAAGAACTTAGAAATCTAT...................................................................................................................................................................................................... 24 0 1 32.00 32 27 5 0 0
......................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGCTGC........... 26 0 1 25.00 25 12 13 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATAT............................... 26 0 1 21.00 21 1 20 0 0
...................................................................................................TTCTCTAAAACTGTCCTATAGACACGGC............................................................................................................................ 28 0 1 20.00 20 18 2 0 0
......................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGCTG............ 25 0 1 18.00 18 6 12 0 0
..........................................TAGAAATCTATTCAAACAGACCACCACC..................................................................................................................................................................................... 28 0 1 17.00 17 17 0 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCA.................................. 23 0 1 17.00 17 0 17 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGC.............. 24 0 1 16.00 16 10 6 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTG............ 26 0 1 16.00 16 4 12 0 0
......................................................................TCACCTATCCACCTCGCCGCCATCC............................................................................................................................................................ 25 0 1 16.00 16 16 0 0 0
...............................................................................................TGAATTCTCTAAAACTGTCCTATAGA.................................................................................................................................. 26 0 1 15.00 15 12 3 0 0
....................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGC.............. 25 0 1 14.00 14 6 8 0 0
......................TAGGGGTTGCTCCAAGAACTTAGAAAT.......................................................................................................................................................................................................... 27 0 1 13.00 13 2 11 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTGCT.......... 28 0 1 12.00 12 3 9 0 0
.................................................................................................................................................................................................TTGCATAGATAAAGTGAGTTTTCA.................................. 24 0 1 11.00 11 1 10 0 0
.....................................................................................................................................................TAGAAAGCATTCCCTTAGCAACAGGA............................................................................ 26 0 20 10.45 209 0 209 0 0
......................TAGGGGTTGCTCCAAGAACTTAGAAATC......................................................................................................................................................................................................... 28 0 1 10.00 10 6 4 0 0
........................................................................................................TAAAACTGTCCTATAGACACGGCTGCCT....................................................................................................................... 28 0 1 10.00 10 9 1 0 0
....................................................................................................TCTCTAAAACTGTCCTATAGACACGGC............................................................................................................................ 27 0 1 7.00 7 7 0 0 0
...............................................................CACCACCTCACCTATCCACCTCGCCG.................................................................................................................................................................. 26 0 1 7.00 7 3 4 0 0
...............TGACTCCTAGGGGTTGCTCCAAGAACT................................................................................................................................................................................................................. 27 0 1 7.00 7 7 0 0 0
..................................................................CACCTCACCTATCCACCTCGCCGCCA............................................................................................................................................................... 26 0 1 7.00 7 6 1 0 0
...............................................................................................TGAATTCTCTAAAACTGTCCTATAGAC................................................................................................................................. 27 0 1 7.00 7 7 0 0 0
....................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGCTG............ 27 0 1 7.00 7 1 6 0 0
.................................................................................................................................................................................................TTGCATAGATAAAGTGAGTTTTCATA................................ 26 0 1 7.00 7 0 7 0 0
................................TCCAAGAACTTAGAAATCTATTCAAAC................................................................................................................................................................................................ 27 0 1 6.00 6 6 0 0 0
............................................................................................TCCTGAATTCTCTAAAACTGTCCTA...................................................................................................................................... 25 0 1 6.00 6 5 1 0 0
......................TAGGGGTTGCTCCAAGAACTTAGAAA........................................................................................................................................................................................................... 26 0 1 6.00 6 2 4 0 0
............................TTGCTCCAAGAACTTAGAAATCTAT...................................................................................................................................................................................................... 25 0 1 6.00 6 6 0 0 0
...............................................................CACCACCTCACCTATCCACCTCGCCGC................................................................................................................................................................. 27 0 1 6.00 6 4 2 0 0
......................................................................TCACCTATCCACCTCGCCGCCATC............................................................................................................................................................. 24 0 1 6.00 6 6 0 0 0
....................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGCTGC........... 28 0 1 6.00 6 0 6 0 0
...............................................................................................TGAATTCTCTAAAACTGTCCTATA.................................................................................................................................... 24 0 1 5.00 5 5 0 0 0
......AATTTGCAATGACTCCTAGGGGT.............................................................................................................................................................................................................................. 23 0 1 5.00 5 1 3 1 0
.............................TGCTCCAAGAACTTAGAAATCTATT..................................................................................................................................................................................................... 25 0 1 5.00 5 3 2 0 0
...................................................................................................................................................................................................................TTTTCATATCTCTCACCCACAGAAGC.............. 26 0 1 5.00 5 4 1 0 0
......................................................CAAACAGACCACCACCTCACCTA.............................................................................................................................................................................. 23 0 1 5.00 5 5 0 0 0
.....................................................TCAAACAGACCACCACCTCACCTAT............................................................................................................................................................................. 25 0 1 5.00 5 3 2 0 0
.....................................................TCAAACAGACCACCACCTCACCTATCC........................................................................................................................................................................... 27 0 1 5.00 5 5 0 0 0
.....................................................TCAAACAGACCACCACCTCACCTATC............................................................................................................................................................................ 26 0 1 5.00 5 5 0 0 0
.......................................................................................CGCCATCCTGAATTCTCTAAAACTGTCC........................................................................................................................................ 28 0 1 5.00 5 5 0 0 0
................................................................................................................................................................................................................................CACCCACAGAAGCTGCTCAAGAGAGGC 27 0 20 4.20 84 19 65 0 0
.......................................................................CACCTATCCACCTCGCCGCCATCCTGAA........................................................................................................................................................ 28 0 1 4.00 4 4 0 0 0
..................................................................CACCTCACCTATCCACCTCGCCGC................................................................................................................................................................. 24 0 1 4.00 4 1 3 0 0
..........TGCAATGACTCCTAGGGGTTGCTCCAAG..................................................................................................................................................................................................................... 28 0 1 4.00 4 4 0 0 0
.....AAATTTGCAATGACTCCTAGGGGT.............................................................................................................................................................................................................................. 24 0 1 4.00 4 0 4 0 0
......................................................................TCACCTATCCACCTCGCCGCCA............................................................................................................................................................... 22 0 1 4.00 4 4 0 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCT............. 25 0 1 4.00 4 2 2 0 0
..TACAAATTTGCAATGACTCCTAGGGG............................................................................................................................................................................................................................... 26 0 1 4.00 4 3 1 0 0
................................................................ACCACCTCACCTATCCACCTCGCCGC................................................................................................................................................................. 26 0 1 4.00 4 2 2 0 0
......................................................................TCACCTATCCACCTCGCCGCCAT.............................................................................................................................................................. 23 0 1 4.00 4 4 0 0 0
...............................................................................................TGAATTCTCTAAAACTGTCCTATAG................................................................................................................................... 25 0 1 4.00 4 4 0 0 0
..................................................................................................................................................................................................................................CCCACAGAAGCTGCTCAAGAGAGGC 25 0 20 3.55 71 7 62 0 2
....................................................TTCAAACAGACCACCACCTCACCTA.............................................................................................................................................................................. 25 0 1 3.00 3 1 2 0 0
.......................................................................CACCTATCCACCTCGCCGCCAT.............................................................................................................................................................. 22 0 1 3.00 3 3 0 0 0
...................................................................................TCGCCGCCATCCTGAATTCTCTAAAACTG........................................................................................................................................... 29 0 1 3.00 3 3 0 0 0
......................................................................TCACCTATCCACCTCGCCGCCATCCT........................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0
.........................................................................................................AAAACTGTCCTATAGACACGGCTGCCT....................................................................................................................... 27 0 1 3.00 3 2 1 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATATC.............................. 27 0 1 3.00 3 1 2 0 0
......................................................................TCACCTATCCACCTCGCCGCCATCCTGAA........................................................................................................................................................ 29 0 1 3.00 3 3 0 0 0
......................................AACTTAGAAATCTATTCAAACAGACCAC......................................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0
...................................................................ACCTCACCTATCCACCTCGCCGC................................................................................................................................................................. 23 0 1 3.00 3 2 1 0 0
..........................................................................................CATCCTGAATTCTCTAAAACTGTCC........................................................................................................................................ 25 0 1 3.00 3 3 0 0 0
....................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGCT............. 26 0 1 3.00 3 1 2 0 0
.....................................................................................................................................................TAGAAAGCATTCCCTTAGCAACAGGAGA.......................................................................... 28 0 20 2.50 50 0 50 0 0
...............................................................................................................................................................................................................................TCACCCACAGAAGCTGCTCAAGAGAGGC 28 0 20 2.25 45 7 37 1 0
...................................................................................................TTCTCTAAAACTGTCCTATAGACACGG............................................................................................................................. 27 0 1 2.00 2 1 1 0 0
............................................................................................TCCTGAATTCTCTAAAACTGTCCTATA.................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
..........................................TAGAAATCTATTCAAACAGACCACCAC...................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
.....................................................TCAAACAGACCACCACCTCACCTATCCA.......................................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0
......................................................CAAACAGACCACCACCTCACCTATCCA.......................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
................................................................ACCACCTCACCTATCCACCTCGCCG.................................................................................................................................................................. 25 0 1 2.00 2 1 1 0 0
.......................................................................CACCTATCCACCTCGCCGCCATCCTGA......................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
...............................................................CACCACCTCACCTATCCACCTCGC.................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAATCTGC........... 27 1 1 2.00 2 0 2 0 0
................................................................................................GAATTCTCTAAAACTGTCCTATAGACA................................................................................................................................ 27 0 1 2.00 2 2 0 0 0
......................................................CAAACAGACCACCACCTCACCTATCCACC........................................................................................................................................................................ 29 0 1 2.00 2 2 0 0 0
......................................................................................................TCTAAAACTGTCCTATAGACACGGC............................................................................................................................ 25 0 1 2.00 2 2 0 0 0
............................................................GACCACCACCTCACCTATCCACCTC...................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0
...............TGACTCCTAGGGGTTGCTCCAAGAA................................................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0
......................................AACTTAGAAATCTATTCAAACAGACC........................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0
.............................TGCTCCAAGAACTTAGAAATCTATTCA................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
......................................................................................................TCTAAAACTGTCCTATAGACACGGCT........................................................................................................................... 26 0 1 2.00 2 1 1 0 0
......................................................................................................................................................................................................TAGATAAAGTGAGTTTTCATATCT............................. 24 0 1 2.00 2 0 2 0 0
......................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGC.............. 23 0 1 2.00 2 2 0 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCAACAGAAGCTGC........... 27 1 1 2.00 2 0 2 0 0
..................................................TATTCAAACAGACCACCACCTCACCTA.............................................................................................................................................................................. 27 0 1 2.00 2 1 1 0 0
........................................................................................................TAAAACTGTCCTATAGACACGGCTGCC........................................................................................................................ 27 0 1 2.00 2 1 1 0 0
...................................................................................................................TATAGACACGGCTGCCTTTTTCTTTTTC............................................................................................................ 28 0 1 2.00 2 2 0 0 0
............................................................GACCACCACCTCACCTATCCACCTCG..................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0
.....................................................TCAAACAGACCACCACCTCACCTATCCAC......................................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0
....................................................................................................TCTCTAAAACTGTCCTATAGACACGG............................................................................................................................. 26 0 1 2.00 2 2 0 0 0
......................................................................................................................................................................................................TAGATAAAGTGAGTTTTCATATCTCT........................... 26 0 1 2.00 2 0 1 1 0
..........TGCAATGACTCCTAGGGGTTGCTC......................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0
...................................................................................................................TATAGACACGGCTGCCTTTTTCTTTT.............................................................................................................. 26 0 1 2.00 2 2 0 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCAT................................. 24 0 1 2.00 2 0 2 0 0
............................TTGCTCCAAGAACTTAGAAATCTATT..................................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0
................................................................................................................................................................................................TTTGCATAGATAAAGTGAGTTTTCA.................................. 25 0 1 2.00 2 0 2 0 0
..............................................................................................CTGAATTCTCTAAAACTGTCCTATAGACA................................................................................................................................ 29 0 1 2.00 2 2 0 0 0
...ACAAATTTGCAATGACTCCTAGGGGT.............................................................................................................................................................................................................................. 26 0 1 2.00 2 0 2 0 0
...........................................................................................................................CGGCTGCCTTTTTCTTTTTCTCCCA....................................................................................................... 25 0 1 2.00 2 2 0 0 0
......................................................................................................................................................................................................TAGATAAAGTGAGTTTTCATATCTCTCA......................... 28 0 1 2.00 2 0 2 0 0
.......................................................................................CGCCATCCTGAATTCTCTAAAACTGT.......................................................................................................................................... 26 0 1 2.00 2 1 1 0 0
.......................................................................CACCTATCCACCTCGCCGCCATCCTG.......................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0
.......................................................................................................................................................................................................................CATATCTCTCACCCACAGAAGC.............. 22 0 1 2.00 2 2 0 0 0
......................................................................TCACCTATCCACCTCGCCGCCATCCTG.......................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0
....................................................................................................................................................................................................................GTTCATATCTCTCACCCACAGAAGCTGC........... 28 1 1 2.00 2 2 0 0 0
......................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGCTGCT.......... 27 0 1 2.00 2 0 2 0 0
.......................................................................CACCTATCCACCTCGCCGCCATCCT........................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0
.....................................................TCAAACAGACCACCACCTCACCT............................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0
....................................................................................................TCTCTAAAACTGTCCTATAGACACGGCT........................................................................................................................... 28 0 1 2.00 2 2 0 0 0
..........................................TAGAAATCTATTCAAACAGACCACCACCT.................................................................................................................................................................................... 29 0 1 2.00 2 2 0 0 0
....................................................................CCTCACCTATCCACCTCGCCGCCATCC............................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0
....................................................................................................................................................................................................................................CACAGAAGCTGCTCAAGAGAGGC 23 0 20 1.95 39 6 33 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCATAGAAGCTGC........... 27 1 1 1.00 1 0 1 0 0
............................................................................................TCCTGAATTCTCTAAAACTGTCCTAT..................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..TACAAATTTGCAATGACTCCTAGGCGT.............................................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0
..TACAAACTTGCAATGACTCCTAGGGGT.............................................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0
..............................................................................................................TGTCCTATAGACACGGCTGCCTTTT.................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..TACAAATTTGCAATGACTCCTAGGTGT.............................................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTC............ 26 1 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCCCAGAAGCTCC........... 27 2 1 1.00 1 0 1 0 0
.......................................................................................................CTAAAACTGTCCTATAGACACGGCTGCCT....................................................................................................................... 29 0 1 1.00 1 1 0 0 0
................GACTCCTAGGGGTTACTCCAAGAACT................................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0
...........................................AGAAATCTATTCAAACAGACCACCACC..................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................CTGCATAGATAAAGTGAGTTTTCATATC.............................. 28 1 1 1.00 1 1 0 0 0
......................................................................GCACCTATCCACCTCGCCGCCATCCTG.......................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................TGAGTTTTCATATCTCTCACCCACAGAAG............... 29 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................TTCATATCTCTGACCCACAGAAGC.............. 24 1 1 1.00 1 1 0 0 0
.....................................GAACTTAGAAATCTATTCAAACAGACC........................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
..........................................................CAGACCACCACCTCACCTATCCACCTCGC.................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0
........................GGGGTTGCTCCAAGAACTTAGAAAT.......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
............CAATGACTCCTAGGGGTTGCTCCAAG..................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................TGAGTTTTCATATCTCTCACCCACA................... 25 0 1 1.00 1 1 0 0 0
......................................................CAAACAGACCACCACCTCACC................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0
.......................................................................................................CTAAAACTGTCCTATAGACAC............................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................GAACTTAGAAATCTATTCAAACAGACCA.......................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
.................................................................CCACCTCACCTATCCACCTCGCCGCC................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0
.............AATCACTCCTAGGGGTTGCTCCAAGA.................................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0
...............TGACTCCTAGGGGTTGCTCCAAGAAC.................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
.........................................TTAGAAATCTATTCAAACAGACCACCACC..................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0
..........................................................................................................................ACGGCTGCCTTTTTCTTTTTCTCCCAT...................................................................................................... 27 0 1 1.00 1 1 0 0 0
.......................AGGGGTTGCTCCAAGAACTTAGAAAT.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
..........................GAGTGCTCCAAGAACTTAGAAATCTAT...................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0
..................................................................................................ATTCTCTAAAACTGTCCTAT..................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
...........................................................AGACCACCACCTCACCTATCCACCTC...................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
......................................................................TCACCTATCCACCTCGCCGCCATCTGA.......................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0
...................TCCTAGGGGTTGCTCCAAGAACTTAG.............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
.....................................................................................................CTCTAAAACTGTCCTATA.................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................TTATATCTCTCACCCACATAAGCTGCTA......... 28 3 1 1.00 1 0 1 0 0
.......................................................................................CGCCATCCTGACTTCTCTAAAACTGTCC........................................................................................................................................ 28 1 1 1.00 1 1 0 0 0
......................................................................................................................AGACACGGCTGCCTTTTTCTTTTTCTCCT........................................................................................................ 29 1 1 1.00 1 0 1 0 0
...............................................................CACCACCTCACCTATCCACCTCG..................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
..........TGCAATGACTCCTAGGGGTTGCTCC........................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATATCTC............................ 29 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATATCT............................. 28 0 1 1.00 1 1 0 0 0
.......................................................AAACAGACCACCACCTCACCTATCCACC........................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0
........................................................................................................TAAAACTGTCCTATAGACACGGATGCCT....................................................................................................................... 28 1 1 1.00 1 0 1 0 0
.................................................................................................................................................................................................TTGCATAGATAAAGTGAGTTTTCAT................................. 25 0 1 1.00 1 0 1 0 0
..........................................TAGAAATCTATACAAACAGACCACCACC..................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0
...................TCCTAGGGGTTGCTCCAAGAACTT................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0
......................................................CAAACAGACCACCACCTCACCTAT............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
......................TAGGGGTTGCTCCAAGAACT................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
...................................................................................................TTCTCTAAAACTGTCCTATAGACAC............................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.................................................CTATTCAAACAGACCACCACCTCACCTA.............................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0
..................................................................CACCTCACCTATCCACCTCGCCG.................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0
............................TTGTTCCAAGAACTTAGAAATCTAT...................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0
......................TAGGGGTTGCTGCAAGAACTTAGAAATC......................................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0
......................................................................TCACCTATCCACCTCGCCGCCATCCTGA......................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0
................GACTCCTAGGGGTTGCTCCAAGAACT................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................AGTTTTCATATCTCTCACCCACAGAAGC.............. 28 0 1 1.00 1 1 0 0 0
................................................................................................................TCCTATAGACACGGCTGCCTTTTTCTT................................................................................................................ 27 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTGCA.......... 28 1 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACACACAGAAGCTGC........... 27 1 1 1.00 1 0 1 0 0
.......................................................AAACAGACCACCACCTCACCTA.............................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCGCAGAAGCTGC........... 27 1 1 1.00 1 0 1 0 0
............................................................................................TCCTGAATTCTCTAAGACTGTCCTA...................................................................................................................................... 25 1 1 1.00 1 0 1 0 0
.........TTGCAATGACTCCTAGGGGT.............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0
............................................................GACCACCACCTCACCTATCCACCTCGC.................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
................................TCCAAGAACTTAGAAATCTATTCAAACA............................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
.......................AGGGGTTGCTCCAAGAACTTAGAAATCT........................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0
..................................................................CACCTCACCTATCCACCTCGCCGCCATC............................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0
..........................................TAGAAATCTATGCAAACAGACCACCACC..................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0
.....................................................TCAAACAGACCACCACCTCACC................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0
...................................................................ACCTCACCTATCCACCTCGCCGCCA............................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..............................................................CCACCACCTCACCTATCCACCTCGC.................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..............................GCTCCAAGAACTTAGAAATCTATTCAAA................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0
...........................AGTGCTCCAAGAACTTAGAAATCTAT...................................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0
..............................................................................................................TGTCCTATAGACACGGCTGCC........................................................................................................................ 21 0 1 1.00 1 1 0 0 0
...................................................ATTCAAACAGACCACCACCTCACC................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0
...............................................................................................TGAATTCTCTAAAACTGTCCTATAGACAC............................................................................................................................... 29 0 1 1.00 1 1 0 0 0
..........................................................................CTATCCACCTCGCCGCCAT.............................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
...........................................................AGACCACCACCTCACCTATCCACCTCG..................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
...............TGACTCCTAGGGGTTGCTCCAAGA.................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
.......................................................................CACCTATCCACCTCGCCGCCATCCTGT......................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0
..........................................................................................CATCCTGAATTCTCTAAAACTGTCCTA...................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
.........................GGGTTGCTCCAAGAACTTAGAAATCTAT...................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
..............................................................................................................TGTCCTATAGACACGGCTGCCTTTTTCTT................................................................................................................ 29 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................CATATCTCTCACCCACAGAAGCT............. 23 0 1 1.00 1 1 0 0 0
................................................................ACCACTTCACCTATCCACCTCGCCGC................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0
.............................................................................................................CTGTCCTATAGACACGGCTGCCTTT..................................................................................................................... 25 0 1 1.00 1 1 0 0 0
................................................................ACCACCTCACCTATCCACCTCGCCGCCA............................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................................................TAAAGTGAGTTTTCATATCTCTCACC....................... 26 0 1 1.00 1 1 0 0 0
.............................................................................................CCTGAATTCTCTAAAACTGTCCTAT..................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.......ATTTGCAATGACTCCTAGGGGTTGC........................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0
..............................................................................................................TGTCCTATAGACACGGCTGCCTTT..................................................................................................................... 24 0 1 1.00 1 1 0 0 0
.............................................................................................CCTGAATTCTCTAAAACTGTCCTA...................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
..TACAAATTTGTAATGACTCCTAGGGGT.............................................................................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0
..........................................................GAGACCACCACCTCACCTATCCACCT....................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0
......................................................................TCACCTATCCACCTCGCCGCCATTGTA.......................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0
..................................................................................................................CTATAGACACGGCTGCCTTTTTCT................................................................................................................. 24 0 1 1.00 1 1 0 0 0
....................................................TTCAAACAGACCACCACCTCACCTATCC........................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
............................TTGCTCCAAGAACTTAGAAATCTATA..................................................................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0
........................................................................................................TAAAACTGTCCTATAGACACGGCTG.......................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.................................................................CCACCTCACCTATCCACCTCGCCG.................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................TCATATCTCTCACCCACAGAA................ 21 0 1 1.00 1 1 0 0 0
...............................................................................................TGAATTCTCTAAAACTGTCCTAT..................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...............................................................CACCACCTCACCTATCCACCTCGCCGCCA............................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................TCATATCTCTCACCCACAGACGCTG............ 25 1 1 1.00 1 0 1 0 0
.CTACAAATTTGCAATGACTCCTAGGGGT.............................................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0
............................................................GACCACCACCTCACCTATCCACCTCGCCG.................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................CATTTGCATAGATAAAGTGAGTTTTCA.................................. 27 0 1 1.00 1 0 1 0 0
................................................................................................................................................................................................TTTGCATAGATAAAGTGAGTTTTCATA................................ 27 0 1 1.00 1 1 0 0 0
..............................GCTCCAAGAACTTAGAAATCTAT...................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................TTCATGTCTCTCACCCACAGAAGC.............. 24 1 1 1.00 1 1 0 0 0
...........................ATTGCTCCAAGAACTTAGAAATCTAT...................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACA................... 19 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGGGTTTTCA.................................. 23 1 1 1.00 1 0 1 0 0
.....................................................TCAAACAGACGACCACCTCACCTATCCA.......................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................GCATAGATAAAGTGAGTTTTCATA................................ 24 0 1 1.00 1 1 0 0 0
........................................................................................................TAAAACTGTCCTATAGACACGGCTGCCTT...................................................................................................................... 29 0 1 1.00 1 1 0 0 0
.......................................................................CACCTATCCACCTCGCCGCCT............................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0
.......................................................................................CGCCATCCTGAATTCTCTAAAACTG........................................................................................................................................... 25 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTTC........... 27 1 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGCT............. 24 0 1 1.00 1 0 1 0 0
..........TGCAATGACTCCTAGGGGTTGCTCCA....................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
......................................AACTTAGAAATCTATTCAAACAGACCA.......................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
..............................................................CCACCACCTCACCTATCCACCTCG..................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
....................................................................................................................................................................................................................CTTCATATCTCTCACCCACAGAAGCTG............ 27 1 1 1.00 1 0 1 0 0
.................................................................CCACCTCACCTATCCACCTCGCCGC................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................TGAGTTTTCATATCTCTCACCCACAG.................. 26 0 1 1.00 1 1 0 0 0
.........TTGCAATGACTCCTAGGGGTTGCTC......................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................TTGCATAGATAAAGTGAGTTTTCATAT............................... 27 0 1 1.00 1 0 1 0 0
...............................................................................................TGAATTCTCTAGAACTGTCCTATAGACA................................................................................................................................ 28 1 1 1.00 1 1 0 0 0
.......................................................................CACCTATCCACCTCGCCGCCATCC............................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0
..TACAAATTTGCAATGACTCCTAGGG................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0
..................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATAA............................... 26 1 1 1.00 1 0 1 0 0
.............................................................................................CCTGAATTCTCTAAAACTGTCCTATAGA.................................................................................................................................. 28 0 1 1.00 1 1 0 0 0
...........................................AGAAATCTATTCAAACAGACCACCACCT.................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGCA............. 26 1 1 1.00 1 1 0 0 0
.........TTGCAATGACTCCTAGGGGTTGCT.......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
......................TAGGGGTTGCTCCAAGAACTTAGAA............................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
.......................................ACTTAGAAATCTATTCAAACAGAC............................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0
...............................................................CACCACCTCACCTATCCACCTCGCCGT................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0
.......................................................................................CGCCATCCTGAATTCTCTAAAACTGTC......................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
.................................................CTATTCAAACAGACCACCACCTCACC................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................TAGCAACAGGAGAATATTTATTACT.............................................................. 25 0 20 0.80 16 4 12 0 0
...................................................................................................................................................................................................................................CCACAGAAGCTGCTCAAGAGAGGC 24 0 20 0.75 15 0 15 0 0
.................................................................................................................................................................................................................................ACCCACAGAAGCTGCTCAAGAGAGGC 26 0 20 0.60 12 0 12 0 0
.............................................................................TCCACCTCGCCGCCATCCTGAATTCTC................................................................................................................................................... 27 0 15 0.60 9 9 0 0 0
.........................................................................................................................................................................................TACTTCATTTGCATAGATAAAGTGAGT....................................... 27 0 17 0.53 9 4 5 0 0
................................................................................................................................................................................................................................CACCCACAGAAGCTGCTCAAGAGAGG. 26 0 20 0.40 8 0 7 1 0
...................................................................................................................................................................TTAGCAACAGGAGAATATTTATTACT.............................................................. 26 0 20 0.40 8 1 7 0 0
..................................................................................................................................................................................TATTTATTACTTCATTTGCATAGA................................................. 24 0 19 0.37 7 3 4 0 0
....................................................................................................................................................TTAGAAAGCATTCCCTTAGCAACAGGA............................................................................ 27 0 20 0.35 7 6 0 1 0
.........................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTGCTCAAG...... 28 0 20 0.35 7 5 2 0 0
...................................................................................TCGCCGCCATCCTGAATTCTCTAAAAC............................................................................................................................................. 27 0 15 0.33 5 5 0 0 0
......................................................................................................................................................................................TATTACTTCATTTGCATAGATAAAG............................................ 25 0 19 0.32 6 2 4 0 0
...............................................................................................................................................................................................................................TCACCCACAGAAGCTGCTCAAGAGAGG. 27 0 20 0.30 6 1 5 0 0
....................................................................................CGCCGCCATCCTGAATTCTCTAAAAC............................................................................................................................................. 26 0 15 0.27 4 4 0 0 0
.....................................................................................................................................................................................TTATTACTTCATTTGCATAGATAAAG............................................ 26 0 19 0.26 5 4 1 0 0
...................................................................................................................................TTTTTCTTTTTCTCCCATTAGAAAGCA............................................................................................. 27 0 4 0.25 1 0 1 0 0
...............................................................................................................................TGCCTTTTTCTTTTTCTCCCATTAGAA................................................................................................. 27 0 4 0.25 1 1 0 0 0
...............................................................................................................................TGCCTTTTTCTTTTTCTCCCATT..................................................................................................... 23 0 4 0.25 1 1 0 0 0
......................................................................................................................................TTCTTTTTCTCCCATTAGAAAGCAT............................................................................................ 25 0 4 0.25 1 1 0 0 0
.....................................................................................................................................TTTCTTTTTCTCCCATTAGA.................................................................................................. 20 0 4 0.25 1 1 0 0 0
.........................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTGCTCAAGA..... 29 0 20 0.20 4 4 0 0 0
...........................................................................................................................................................................................................................TCTCTCACCCACAGAAGCTGCTCAAGA..... 27 0 20 0.20 4 4 0 0 0
...........................................................................................................................................................................................................................TCTCTCACCCACAGAAGCTGCTCAAG...... 26 0 20 0.20 4 2 2 0 0
....................................................................................................................................................................................TTTATTACTTCATTTGCATAGATAAAG............................................ 27 0 18 0.17 3 3 0 0 0
..........TGCAATGACTCCTAGGAA............................................................................................................................................................................................................................... 18 2 6 0.17 1 0 1 0 0
..................................................................................................................................................................................TATTTATTACTTCATTTGCATAGAT................................................ 25 0 19 0.16 3 2 1 0 0
.........................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTGCT.......... 24 0 20 0.15 3 2 1 0 0
.....................................................................................................................................................TAGAAAGCATTCCCTTAGCAACAGGAG........................................................................... 27 0 20 0.15 3 0 0 2 1
.........................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTGCTCAA....... 27 0 20 0.15 3 2 0 1 0
....................................................................................................................................................................................................................................CACAGAAGCTGCTCAAGAGAGG. 22 0 20 0.15 3 1 2 0 0
.........................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTG............ 22 0 20 0.15 3 2 1 0 0
..................................................................................................................................................................................................................................CCCACAGAAGCTGCTCAAGAGAGG. 24 0 20 0.15 3 0 3 0 0
...........................................................................TATCCACCTCGCCGCCATCCTGAA........................................................................................................................................................ 24 0 15 0.13 2 1 1 0 0
.............................................................................TCCACCTCGCCGCCATCCTGAATTCTCT.................................................................................................................................................. 28 0 15 0.13 2 2 0 0 0
...........................................................................TATCCACCTCGCCGCCATCCTGAATT...................................................................................................................................................... 26 0 15 0.13 2 2 0 0 0
...........................................................................TATCCACCTCGCCGCCATCCTGAATTCT.................................................................................................................................................... 28 0 15 0.13 2 2 0 0 0
...............................................................................CACCTCGCCGCCATCCTGAATTCTCT.................................................................................................................................................. 26 0 15 0.13 2 2 0 0 0
..................................................................................................................................................................................................................................CCCACAGAAGCTGCTCAAGAGA... 22 0 20 0.10 2 2 0 0 0
.......................................................................................................................................................GAAAGCATTCCCTTAGCAACAGGAGAA......................................................................... 27 0 20 0.10 2 2 0 0 0
..........................................................................................................................................TTTTCTCCCATTAGAAAGCATTCCCT....................................................................................... 26 0 20 0.10 2 2 0 0 0

Anti-sense strand reads

TCATGTTTAAACGTTACTGAGGATCCCCAACGAGGTTCTTGAATCTTTAGATAAGTTTGTCTGGTGGTGGAGTGGATAGGTGGAGCGGCGGTAGGACTTAAGAGATTTTGACAGGATATCTGTGCCGACGGAAAAAGAAAAAGAGGGTAATCTTTCGTAAGGGAATCGTTGTCCTCTTATAAATAATGAAGTAAACGTATCTATTTCACTCAAAAGTATAGAGAGTGGGTGTCTTCGACGAGTTCTCTCCG
********************************************************************************************************************************.........................................................((((.....))))***************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body
.................TGAGGATCCCCAACGAGGTTCT.................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0
.................................................................................................TTAAGAGATTTTGACAGGATA..................................................................................................................................... 21 0 1 1.00 1 1 0 0
..............................CGAGGTTCTTGAATCTTTAGATAAGT................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0
........................................................................................................................................GAAAAAGAGGGTAATCTTTCGTA............................................................................................ 23 0 20 0.65 13 8 3 2
.......................................................................................................................................AGAAAAAGAGGGTAATCTTTCGTA............................................................................................ 24 0 20 0.60 12 7 5 0
...................................................................................................................................................................................................................................GGTGTCTTCGACGAGTTCTCTCC. 23 0 20 0.45 9 8 1 0
.................................................................................GGAGCGGCGGTAGGACTTAAGAGA.................................................................................................................................................. 24 0 15 0.40 6 5 1 0
.......................................................................GTAGTTAGGTGGAGCGGC.................................................................................................................................................................. 18 2 3 0.33 1 0 0 1
......................................................................................................................................AAGAAAAAGAGGGTAATCTTTCGTA............................................................................................ 25 0 4 0.25 1 0 1 0
.....................................................................................CGGCGGTAGGACTTAAGAGA.................................................................................................................................................. 20 0 15 0.20 3 1 2 0
..................................................................................GAGCGGCGGTAGGACTTAAGAGA.................................................................................................................................................. 23 0 15 0.20 3 3 0 0
................................................................................................................................CGGAAAAAGAAAAAGTTGGTA...................................................................................................... 21 2 6 0.17 1 0 1 0
......................................................................................GGCGGTAGGACTTAAGAGA.................................................................................................................................................. 19 0 15 0.13 2 1 0 1
.............................................................................................................................................................................................................................AGAGTGGGTGTCTTCGACGAGTTCT..... 25 0 20 0.10 2 1 1 0
...................................................................................AGCGGCGGTAGGACTTAAGAGA.................................................................................................................................................. 22 0 15 0.07 1 1 0 0
..................................................................................GAGCGGCGGTAGGACTTAAGAG................................................................................................................................................... 22 0 15 0.07 1 1 0 0
..................................................................................................................................................................................ATAAATAATGAAGTAAACGTATCTAT............................................... 26 0 19 0.05 1 1 0 0
..........................................................................................................................................................................GTCCTCTTATAAATAATGAAGTAAA........................................................ 25 0 19 0.05 1 1 0 0
..........................................................................................................................................................................GTCCTCTTATAAATAATGAAGTAA......................................................... 24 0 19 0.05 1 1 0 0
.................................................................................................................................................................................................................................TGGGTGTCTTCGACGAGTTCTCTCC. 25 0 20 0.05 1 1 0 0
.................................................................................................................................................................................................................................TGGGTGTCTTCGACGAGTTCTC.... 22 0 20 0.05 1 1 0 0
.........................................................................................................................................AAAAAGAGGGTAATCTTTCGTA............................................................................................ 22 0 20 0.05 1 1 0 0
..................................................................................................................................................................................................................................GGGTGTCTTCGACGAGTTCT..... 20 0 20 0.05 1 0 1 0
.......................................................................................GCGGTAGGACTTCGGTGAT................................................................................................................................................. 19 3 20 0.05 1 1 0 0
...................................................................................................................................................................................................................................GGTGTCTTCGACGAGTTCTCTCCG 24 0 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................AGTGGGTGTCTTCGACGAGTTCT..... 23 0 20 0.05 1 0 1 0
.............................................................................................................................................AGAGGGTAATCTTTCGTA............................................................................................ 18 0 20 0.05 1 1 0 0
................................................................TGGTGGAGTGGATCGGATG........................................................................................................................................................................ 19 3 20 0.05 1 0 0 1
..................................................................................................................................................................................................................................GGGTGTCTTCGACGAGTTCTC.... 21 0 20 0.05 1 0 1 0
.....................................................................................CGGCGGTAGGACTTTAGT.................................................................................................................................................... 18 2 20 0.05 1 0 0 1
....................................................................................................................................AAAAGAAAAGGACGGTAAT.................................................................................................... 19 2 20 0.05 1 1 0 0
.............................................................................................................................................AGAGGGTAATCTTTCGTAAGGGAAT..................................................................................... 25 0 20 0.05 1 0 0 1
...............................................................................................................................................AGGGTAATCTTTCGTAAGGGAATCG................................................................................... 25 0 20 0.05 1 1 0 0
................................................................................................................................................................................................AAACGTATCTATTTCACTCA....................................... 20 0 20 0.05 1 1 0 0
..............................................................................................................................................................................................................................GAGTGGGTGTCTTCGACGAGTTCT..... 24 0 20 0.05 1 1 0 0
.............................................................................................................................................................................................................................AGAGTGGGTGTCTTCGACGAGTTCTC.... 26 0 20 0.05 1 1 0 0
.........................................................................................................................................................................................................................TTAGAGAGTGGGTGTCTTCGAC............ 22 1 20 0.05 1 0 1 0
..............................................................................GGTGGAGCGGCGGTAGGA........................................................................................................................................................... 18 0 20 0.05 1 1 0 0
..................................................................................................................................................................GAATCGTTGTCCTCTTATAAATAATG............................................................... 26 0 20 0.05 1 1 0 0
................................................................................................................................................................................................................................GTGGGTGTCTTCGACGAGTTCTCTCC. 26 0 20 0.05 1 0 1 0
...............................................................................................................................................................AGGGAATCGTTGTCCTCTTATAAAT................................................................... 25 0 20 0.05 1 0 1 0
....................................................................................................................................................................................................................................GTGTCTTCGACGAGTTCTCTCC. 22 0 20 0.05 1 1 0 0
............................................................................................................................................................................................................................TAGAGTGGGTGTCTTCGACGAGT........ 23 1 20 0.05 1 0 1 0
................................AGGTTTTTGAATCATTAG......................................................................................................................................................................................................... 18 2 20 0.05 1 0 1 0
..............................................................................................................................................................................................................................GAGTGGGTGTCTTCGACGAGTTCTCTCC. 28 0 20 0.05 1 1 0 0
...............................................................................................................................................AGGGTAATCTTTCGTAAGGGAATCGTT................................................................................. 27 0 20 0.05 1 1 0 0
.................................................................................................................................................GGTAATCTTTCGTAAGGGAATCGT.................................................................................. 24 0 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004954:3801217-3801467 - dwi_3734 AGTACAAATTTGCAATGACTCCTAGGGGTTGCTCCAAGA---ACTTAGAAATCTATTCAAACAGACCACCACCTCACCTATCCA-CCTCGCCGCCATCCTGAATTCTCTAAAACTGTCCTATAGACACGGCTGCCTTTTTCTTTTTCTCCC---------ATTAGAAAGCATTCCCTTAGCAACAGGAGAATATTTATTACTTCATTTGCATAGATAAAGTGAGTTTTCATATCTCTCACCCACAGAAGCTGCTCAAGAG--A-------GG----C
droMoj3 scaffold_6540:8836946-8837000 - ATTGTTTTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGTATAAGGTTTTTTTTCATATCTAACATTTATAAAA----------------------AT----T
droGri2 scaffold_14624:773224-773273 - TTTTTCTTTTTT-----------------------------------------------------------------------------------------------------------------------------------------AT---------ATAGGAAAGCATTTCTCTACAAATGAGAAAACA-----------------------------------------------------------------------------TT----T
dp5 Unknown_group_29:22726-22778 - TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTCATTCCCTAAAGCTGCTGA---------------A----G
droPer2 scaffold_359:2091-2151 + TTAGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTCATTCCCTAAAGCTGCTGAAGTTATT-------GG----C
droAna3 scaffold_13228:141955-142055 + ATTATGGATTTTAAATTGGTCT-------------AAGC---ATTTA--AGTC----TTGCAATAAGACAATCTCGTCTTCCCAGCCTACCATCCATTGCTGGCTCT-----------------------------------------------------------------------------GTGAAAACG-----------------------------------------------------------------------------TTTTACA
droBip1 scf7180000395854:5762-5814 - TACTTTCTCCCT-----------------------------------------------------------------------------------------------------------------------------------TTCCTCCTGGAGAAAGAACTAGAAGGCATTCCCTTAGC-----------------------------------------------------------------------------------------AA----C
droKik1 scf7180000302461:937539-937624 + CAGCTCACTA-------------------------------------------------------------ATTCATTTATGCA-AATCCCCGGCCTGTCAATTTCTTAACAACTTTTCTTTAAACACAGCCAGCTCTTTCTTTC-----------------------------------------------------------------------------------------------------------------------------TT----T
droEle1 scf7180000490640:376743-376784 - GCCATCCTGA--------------------------------------------------------------------------------------------AGCCGCTGAA--------------------------------------------------------GCGGT--------------------------------------------------------------------------------CCTACAA---CCGCGGACG----C
droRho1 scf7180000779985:340672-340736 - AGGGCAAATTTGCATTTATTACTTGGCGTTGTTTTTGGATATTTTTAAATATTTATTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-TAGA
droBia1 scf7180000302155:1783672-1783682 + AAAAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----T
droTak1 scf7180000415862:319118-319162 + ATTAGGGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------AATTACCCTAAAAACAGGAAAATATTTCTTATT--------------------------------------------------------------------TC----A
droEug1 scf7180000408936:241805-241855 - CTTTAGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTAAATATTTATTATTAAATATAAATAAATAAAATA------------------------------------------------AA----T
dm3 chrX:22061870-22061920 + GAGCAGAT-TTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTCATTTGGCTAGATGAGATGTATTTTTGTA--------------------------------------TC----T
droYak3 v2_chrX_random_005:800-845 + CCACTCTA----------------------------------------------------CCGCACTACCACTCCACCTCTCCG-CCGCCCCGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----C
droEre2 scaffold_4512:349515-349588 - TATTTGGTTCTT-----------------------------------------------------------------------------------------------------------------------------------TACTAT----------------------------------------------------------CATAGGAATAAAGAAGGTTATTATGCCTGGCACCAATTGAAGCTGTTCTAGAC----------AG----G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AGTACAAATTTGCAATGACTCCTAGGGGTTGCTCCAAGA---ACTTAGAAATCTATTCAAACAGACCACCACCTCACCTATCCA-CCTCGCCGCCATCCTGAATTCTCTAAAACTGTCCTATAGACACGGCTGCCTTTTTCTTTTTCTCCC---------ATTAGAAAGCATTCCCTTAGCAACAGGAGAATATTTATTACTTCATTTGCATAGATAAAGTGAGTTTTCATATCTCTCACCCACAGAAGCTGCTCAAGAG--A-------GG----CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTGC........................27191.00910350560
...................................................................................................TGAATTCTCTAAAACTGTCCTATAGACA......................................................................................................................................................28154.0054052020
..TACAAATTTGCAATGACTCCTAGGGGT........................................................................................................................................................................................................................................................27153.0053040490
...............................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATA.............................................25152.00520120391
........................................................TCAAACAGACCACCACCTCACCTA.....................................................................................................................................................................................................24135.0035029060
.............................TGCTCCAAGA---ACTTAGAAATCTAT.............................................................................................................................................................................................................................24132.0032027050
...................................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGCTGC........................26125.00250120130
...............................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATAT............................................26121.0021010200
.......................................................................................................TTCTCTAAAACTGTCCTATAGACACGGC..................................................................................................................................................28120.0020018020
...................................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGCTG.........................25118.0018060120
.............................................TAGAAATCTATTCAAACAGACCACCACC............................................................................................................................................................................................................28117.0017017000
...............................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCA...............................................23117.0017000170
..................................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGC...........................24116.0016010060
..................................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTG.........................26116.0016040120
.........................................................................TCACCTATCCA-CCTCGCCGCCATCC..................................................................................................................................................................................25116.0016016000
...................................................................................................TGAATTCTCTAAAACTGTCCTATAGA........................................................................................................................................................26115.0015012030
.................................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGC...........................25114.001406080
......................TAGGGGTTGCTCCAAGA---ACTTAGAAAT.................................................................................................................................................................................................................................27113.0013020110
..................................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTGCT.......................28112.001203090
..............................................................................................................................................................................................................TTGCATAGATAAAGTGAGTTTTCA...............................................24111.0011010100
..................................................................................................................................................................TAGAAAGCATTCCCTTAGCAACAGGA.........................................................................................262010.452090002090
......................TAGGGGTTGCTCCAAGA---ACTTAGAAATC................................................................................................................................................................................................................................28110.001006040
............................................................................................................TAAAACTGTCCTATAGACACGGCTGCCT.............................................................................................................................................28110.001009010
........................................................................................................TCTCTAAAACTGTCCTATAGACACGGC..................................................................................................................................................2717.00707000
..................................................................CACCACCTCACCTATCCA-CCTCGCCG........................................................................................................................................................................................2617.00703040
...............TGACTCCTAGGGGTTGCTCCAAGA---ACT........................................................................................................................................................................................................................................2717.00707000
.....................................................................CACCTCACCTATCCA-CCTCGCCGCCA.....................................................................................................................................................................................2617.00706010
...................................................................................................TGAATTCTCTAAAACTGTCCTATAGAC.......................................................................................................................................................2717.00707000
.................................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGCTG.........................2717.00701060
..............................................................................................................................................................................................................TTGCATAGATAAAGTGAGTTTTCATA.............................................2617.00700070
................................TCCAAGA---ACTTAGAAATCTATTCAAAC.......................................................................................................................................................................................................................2716.00606000
................................................................................................TCCTGAATTCTCTAAAACTGTCCTA............................................................................................................................................................2516.00605010
......................TAGGGGTTGCTCCAAGA---ACTTAGAAA..................................................................................................................................................................................................................................2616.00602040
............................TTGCTCCAAGA---ACTTAGAAATCTAT.............................................................................................................................................................................................................................2516.00606000
..................................................................CACCACCTCACCTATCCA-CCTCGCCGC.......................................................................................................................................................................................2716.00604020
.........................................................................TCACCTATCCA-CCTCGCCGCCATC...................................................................................................................................................................................2416.00606000
.................................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGCTGC........................2816.00600060
...................................................................................................TGAATTCTCTAAAACTGTCCTATA..........................................................................................................................................................2415.00505000
......AATTTGCAATGACTCCTAGGGGT........................................................................................................................................................................................................................................................2315.00501130
.............................TGCTCCAAGA---ACTTAGAAATCTATT............................................................................................................................................................................................................................2515.00503020
................................................................................................................................................................................................................................TTTTCATATCTCTCACCCACAGAAGC...........................2615.00504010
.........................................................CAAACAGACCACCACCTCACCTA.....................................................................................................................................................................................................2315.00505000
........................................................TCAAACAGACCACCACCTCACCTAT....................................................................................................................................................................................................2515.00503020
........................................................TCAAACAGACCACCACCTCACCTATCC..................................................................................................................................................................................................2715.00505000
........................................................TCAAACAGACCACCACCTCACCTATC...................................................................................................................................................................................................2615.00505000
...........................................................................................CGCCATCCTGAATTCTCTAAAACTGTCC..............................................................................................................................................................2815.00505000
.............................................................................................................................................................................................................................................CACCCACAGAAGCTGCTCAAGAG--A-------GG----C27204.20840190650
..........................................................................CACCTATCCA-CCTCGCCGCCATCCTGAA..............................................................................................................................................................................2814.00404000
.....................................................................CACCTCACCTATCCA-CCTCGCCGC.......................................................................................................................................................................................2414.00401030
..........TGCAATGACTCCTAGGGGTTGCTCCAAG...............................................................................................................................................................................................................................................2814.00404000
.....AAATTTGCAATGACTCCTAGGGGT........................................................................................................................................................................................................................................................2414.00400040
.........................................................................TCACCTATCCA-CCTCGCCGCCA.....................................................................................................................................................................................2214.00404000
..................................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCT..........................2514.00402020
..TACAAATTTGCAATGACTCCTAGGGG.........................................................................................................................................................................................................................................................2614.00403010
...................................................................ACCACCTCACCTATCCA-CCTCGCCGC.......................................................................................................................................................................................2614.00402020
.........................................................................TCACCTATCCA-CCTCGCCGCCAT....................................................................................................................................................................................2314.00404000
...................................................................................................TGAATTCTCTAAAACTGTCCTATAG.........................................................................................................................................................2514.00404000
...............................................................................................................................................................................................................................................CCCACAGAAGCTGCTCAAGAG--A-------GG----C25203.5571070622
.......................................................TTCAAACAGACCACCACCTCACCTA.....................................................................................................................................................................................................2513.00301020
..........................................................................CACCTATCCA-CCTCGCCGCCAT....................................................................................................................................................................................2213.00303000
.......................................................................................TCGCCGCCATCCTGAATTCTCTAAAACTG.................................................................................................................................................................2913.00303000
.........................................................................TCACCTATCCA-CCTCGCCGCCATCCT.................................................................................................................................................................................2613.00303000
.............................................................................................................AAAACTGTCCTATAGACACGGCTGCCT.............................................................................................................................................2713.00302010
...............................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATATC...........................................2713.00301020
.........................................................................TCACCTATCCA-CCTCGCCGCCATCCTGAA..............................................................................................................................................................................2913.00303000
......................................A---ACTTAGAAATCTATTCAAACAGACCAC................................................................................................................................................................................................................2813.00303000
......................................................................ACCTCACCTATCCA-CCTCGCCGC.......................................................................................................................................................................................2313.00302010
..............................................................................................CATCCTGAATTCTCTAAAACTGTCC..............................................................................................................................................................2513.00303000
.................................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGCT..........................2613.00301020
..................................................................................................................................................................TAGAAAGCATTCCCTTAGCAACAGGAGA.......................................................................................28202.5050000500
............................................................................................................................................................................................................................................TCACCCACAGAAGCTGCTCAAGAG--A-------GG----C28202.2545071370
.......................................................................................................TTCTCTAAAACTGTCCTATAGACACGG...................................................................................................................................................2712.00201010
................................................................................................TCCTGAATTCTCTAAAACTGTCCTATA..........................................................................................................................................................2712.00202000
.............................................TAGAAATCTATTCAAACAGACCACCAC.............................................................................................................................................................................................................2712.00202000
........................................................TCAAACAGACCACCACCTCACCTATCCA-................................................................................................................................................................................................2812.00202000
.........................................................CAAACAGACCACCACCTCACCTATCCA-................................................................................................................................................................................................2712.00202000
...................................................................ACCACCTCACCTATCCA-CCTCGCCG........................................................................................................................................................................................2512.00201010
..........................................................................CACCTATCCA-CCTCGCCGCCATCCTGA...............................................................................................................................................................................2712.00202000
..................................................................CACCACCTCACCTATCCA-CCTCGC..........................................................................................................................................................................................2412.00202000
....................................................................................................GAATTCTCTAAAACTGTCCTATAGACA......................................................................................................................................................2712.00202000
.........................................................CAAACAGACCACCACCTCACCTATCCA-CC..............................................................................................................................................................................................2912.00202000
..........................................................................................................TCTAAAACTGTCCTATAGACACGGC..................................................................................................................................................2512.00202000
...............................................................GACCACCACCTCACCTATCCA-CCTC............................................................................................................................................................................................2512.00202000
...............TGACTCCTAGGGGTTGCTCCAAGA---A..........................................................................................................................................................................................................................................2512.00202000
......................................A---ACTTAGAAATCTATTCAAACAGACC..................................................................................................................................................................................................................2612.00202000
.............................TGCTCCAAGA---ACTTAGAAATCTATTCA..........................................................................................................................................................................................................................2712.00202000
..........................................................................................................TCTAAAACTGTCCTATAGACACGGCT.................................................................................................................................................2612.00201010
...................................................................................................................................................................................................................TAGATAAAGTGAGTTTTCATATCT..........................................2412.00200020
...................................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGC...........................2312.00202000
.....................................................TATTCAAACAGACCACCACCTCACCTA.....................................................................................................................................................................................................2712.00201010
............................................................................................................TAAAACTGTCCTATAGACACGGCTGCC..............................................................................................................................................2712.00201010
.......................................................................................................................TATAGACACGGCTGCCTTTTTCTTTTTC..................................................................................................................................2812.00202000
...............................................................GACCACCACCTCACCTATCCA-CCTCG...........................................................................................................................................................................................2612.00202000
........................................................TCAAACAGACCACCACCTCACCTATCCA-C...............................................................................................................................................................................................2912.00202000
........................................................................................................TCTCTAAAACTGTCCTATAGACACGG...................................................................................................................................................2612.00202000
...................................................................................................................................................................................................................TAGATAAAGTGAGTTTTCATATCTCT........................................2612.00200110
..........TGCAATGACTCCTAGGGGTTGCTC...................................................................................................................................................................................................................................................2412.00202000
.......................................................................................................................TATAGACACGGCTGCCTTTTTCTTTT....................................................................................................................................2612.00202000
...............................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCAT..............................................2412.00200020
............................TTGCTCCAAGA---ACTTAGAAATCTATT............................................................................................................................................................................................................................2612.00200020
.............................................................................................................................................................................................................TTTGCATAGATAAAGTGAGTTTTCA...............................................2512.00200020
..................................................................................................CTGAATTCTCTAAAACTGTCCTATAGACA......................................................................................................................................................2912.00202000
...ACAAATTTGCAATGACTCCTAGGGGT........................................................................................................................................................................................................................................................2612.00200020
...............................................................................................................................CGGCTGCCTTTTTCTTTTTCTCCC---------A....................................................................................................................2512.00202000
...................................................................................................................................................................................................................TAGATAAAGTGAGTTTTCATATCTCTCA......................................2812.00200020
...........................................................................................CGCCATCCTGAATTCTCTAAAACTGT................................................................................................................................................................2612.00201010
..........................................................................CACCTATCCA-CCTCGCCGCCATCCTG................................................................................................................................................................................2612.00202000
....................................................................................................................................................................................................................................CATATCTCTCACCCACAGAAGC...........................2212.00202000
.........................................................................TCACCTATCCA-CCTCGCCGCCATCCTG................................................................................................................................................................................2712.00202000
...................................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGCTGCT.......................2712.00200020
..........................................................................CACCTATCCA-CCTCGCCGCCATCCT.................................................................................................................................................................................2512.00202000
........................................................TCAAACAGACCACCACCTCACCT......................................................................................................................................................................................................2312.00202000
........................................................................................................TCTCTAAAACTGTCCTATAGACACGGCT.................................................................................................................................................2812.00202000
.............................................TAGAAATCTATTCAAACAGACCACCACCT...........................................................................................................................................................................................................2912.00202000
.......................................................................CCTCACCTATCCA-CCTCGCCGCCATCC..................................................................................................................................................................................2712.00202000
.................................................................................................................................................................................................................................................CACAGAAGCTGCTCAAGAG--A-------GG----C23201.9539060330
................................................................................................TCCTGAATTCTCTAAAACTGTCCTAT...........................................................................................................................................................2611.00101000
..................................................................................................................TGTCCTATAGACACGGCTGCCTTTT..........................................................................................................................................2511.00101000
..................................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTC.........................2611.00100010
...........................................................................................................CTAAAACTGTCCTATAGACACGGCTGCCT.............................................................................................................................................2911.00101000
..............................................AGAAATCTATTCAAACAGACCACCACC............................................................................................................................................................................................................2711.00101000
............................................................................................................................................................................................................................TGAGTTTTCATATCTCTCACCCACAGAAG............................2911.00101000
.....................................GA---ACTTAGAAATCTATTCAAACAGACC..................................................................................................................................................................................................................2711.00101000
.............................................................CAGACCACCACCTCACCTATCCA-CCTCGC..........................................................................................................................................................................................2911.00101000
........................GGGGTTGCTCCAAGA---ACTTAGAAAT.................................................................................................................................................................................................................................2511.00101000
............CAATGACTCCTAGGGGTTGCTCCAAG...............................................................................................................................................................................................................................................2611.00101000
............................................................................................................................................................................................................................TGAGTTTTCATATCTCTCACCCACA................................2511.00101000
.........................................................CAAACAGACCACCACCTCACC.......................................................................................................................................................................................................2111.00101000
...........................................................................................................CTAAAACTGTCCTATAGACAC.....................................................................................................................................................2111.00101000
.....................................GA---ACTTAGAAATCTATTCAAACAGACCA.................................................................................................................................................................................................................2811.00101000
....................................................................CCACCTCACCTATCCA-CCTCGCCGCC......................................................................................................................................................................................2611.00101000
...............TGACTCCTAGGGGTTGCTCCAAGA---AC.........................................................................................................................................................................................................................................2611.00101000
............................................TTAGAAATCTATTCAAACAGACCACCACC............................................................................................................................................................................................................2911.00101000
..............................................................................................................................ACGGCTGCCTTTTTCTTTTTCTCCC---------AT...................................................................................................................2711.00101000
.......................AGGGGTTGCTCCAAGA---ACTTAGAAAT.................................................................................................................................................................................................................................2611.00100010
......................................................................................................ATTCTCTAAAACTGTCCTAT...........................................................................................................................................................2011.00101000
..............................................................AGACCACCACCTCACCTATCCA-CCTC............................................................................................................................................................................................2611.00101000
.........................................................................TCACCTATCCA-CCTCGCCGCCATCTGA................................................................................................................................................................................2711.00101000
...................TCCTAGGGGTTGCTCCAAGA---ACTTAG.....................................................................................................................................................................................................................................2611.00101000
.........................................................................................................CTCTAAAACTGTCCTATA..........................................................................................................................................................1811.00101000
..........................................................................................................................AGACACGGCTGCCTTTTTCTTTTTCTCCT---------.....................................................................................................................2911.00100010
..................................................................CACCACCTCACCTATCCA-CCTCG...........................................................................................................................................................................................2311.00101000
..........TGCAATGACTCCTAGGGGTTGCTCC..................................................................................................................................................................................................................................................2511.00101000
...............................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATATCTC.........................................2911.00101000
...............................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATATCT..........................................2811.00101000
..........................................................AAACAGACCACCACCTCACCTATCCA-CC..............................................................................................................................................................................................2811.00101000
..............................................................................................................................................................................................................TTGCATAGATAAAGTGAGTTTTCAT..............................................2511.00100010
...................TCCTAGGGGTTGCTCCAAGA---ACTT.......................................................................................................................................................................................................................................2411.00100010
.........................................................CAAACAGACCACCACCTCACCTAT....................................................................................................................................................................................................2411.00101000
......................TAGGGGTTGCTCCAAGA---ACT........................................................................................................................................................................................................................................2011.00101000
.......................................................................................................TTCTCTAAAACTGTCCTATAGACAC.....................................................................................................................................................2511.00101000
....................................................CTATTCAAACAGACCACCACCTCACCTA.....................................................................................................................................................................................................2811.00100010
.....................................................................CACCTCACCTATCCA-CCTCGCCG........................................................................................................................................................................................2311.00100010
.........................................................................TCACCTATCCA-CCTCGCCGCCATCCTGA...............................................................................................................................................................................2811.00100010
................GACTCCTAGGGGTTGCTCCAAGA---ACT........................................................................................................................................................................................................................................2611.00101000
..............................................................................................................................................................................................................................AGTTTTCATATCTCTCACCCACAGAAGC...........................2811.00101000
....................................................................................................................TCCTATAGACACGGCTGCCTTTTTCTT......................................................................................................................................2711.00100010
..................................................................................................................................................................................................................................TTCATATCTCTCACCCACAGAAGCTGCA.......................2811.00100010
..........................................................AAACAGACCACCACCTCACCTA.....................................................................................................................................................................................................2211.00101000
.........TTGCAATGACTCCTAGGGGT........................................................................................................................................................................................................................................................2011.00100010
...............................................................GACCACCACCTCACCTATCCA-CCTCGC..........................................................................................................................................................................................2711.00101000
................................TCCAAGA---ACTTAGAAATCTATTCAAACA......................................................................................................................................................................................................................2811.00101000
.......................AGGGGTTGCTCCAAGA---ACTTAGAAATCT...............................................................................................................................................................................................................................2811.00101000
.....................................................................CACCTCACCTATCCA-CCTCGCCGCCATC...................................................................................................................................................................................2811.00101000
........................................................TCAAACAGACCACCACCTCACC.......................................................................................................................................................................................................2211.00101000
......................................................................ACCTCACCTATCCA-CCTCGCCGCCA.....................................................................................................................................................................................2511.00101000
.................................................................CCACCACCTCACCTATCCA-CCTCGC..........................................................................................................................................................................................2511.00101000
..............................GCTCCAAGA---ACTTAGAAATCTATTCAAA........................................................................................................................................................................................................................2811.00101000
..................................................................................................................TGTCCTATAGACACGGCTGCC..............................................................................................................................................2111.00101000
......................................................ATTCAAACAGACCACCACCTCACC.......................................................................................................................................................................................................2411.00101000
...................................................................................................TGAATTCTCTAAAACTGTCCTATAGACAC.....................................................................................................................................................2911.00101000
.............................................................................CTATCCA-CCTCGCCGCCAT....................................................................................................................................................................................1911.00101000
..............................................................AGACCACCACCTCACCTATCCA-CCTCG...........................................................................................................................................................................................2711.00101000
...............TGACTCCTAGGGGTTGCTCCAAGA---...........................................................................................................................................................................................................................................2411.00101000
..........................................................................CACCTATCCA-CCTCGCCGCCATCCTGT...............................................................................................................................................................................2711.00100010
..............................................................................................CATCCTGAATTCTCTAAAACTGTCCTA............................................................................................................................................................2711.00100010
.........................GGGTTGCTCCAAGA---ACTTAGAAATCTAT.............................................................................................................................................................................................................................2811.00101000
..................................................................................................................TGTCCTATAGACACGGCTGCCTTTTTCTT......................................................................................................................................2911.00101000
....................................................................................................................................................................................................................................CATATCTCTCACCCACAGAAGCT..........................2311.00101000
.................................................................................................................CTGTCCTATAGACACGGCTGCCTTT...........................................................................................................................................2511.00101000
...................................................................ACCACCTCACCTATCCA-CCTCGCCGCCA.....................................................................................................................................................................................2811.00101000
.......................................................................................................................................................................................................................TAAAGTGAGTTTTCATATCTCTCACC....................................2611.00101000
.................................................................................................CCTGAATTCTCTAAAACTGTCCTAT...........................................................................................................................................................2511.00101000
.......ATTTGCAATGACTCCTAGGGGTTGC.....................................................................................................................................................................................................................................................2511.00100010
..................................................................................................................TGTCCTATAGACACGGCTGCCTTT...........................................................................................................................................2411.00101000
.................................................................................................CCTGAATTCTCTAAAACTGTCCTA............................................................................................................................................................2411.00101000
......................................................................................................................CTATAGACACGGCTGCCTTTTTCT.......................................................................................................................................2411.00101000
.......................................................TTCAAACAGACCACCACCTCACCTATCC..................................................................................................................................................................................................2811.00101000
............................TTGCTCCAAGA---ACTTAGAAATCTATA............................................................................................................................................................................................................................2611.00100010
............................................................................................................TAAAACTGTCCTATAGACACGGCTG................................................................................................................................................2511.00101000
....................................................................CCACCTCACCTATCCA-CCTCGCCG........................................................................................................................................................................................2411.00101000
...................................................................................................................................................................................................................................TCATATCTCTCACCCACAGAA.............................2111.00101000
...................................................................................................TGAATTCTCTAAAACTGTCCTAT...........................................................................................................................................................2311.00101000
..................................................................CACCACCTCACCTATCCA-CCTCGCCGCCA.....................................................................................................................................................................................2911.00101000
...............................................................GACCACCACCTCACCTATCCA-CCTCGCCG........................................................................................................................................................................................2911.00101000
...........................................................................................................................................................................................................CATTTGCATAGATAAAGTGAGTTTTCA...............................................2711.00100010
.............................................................................................................................................................................................................TTTGCATAGATAAAGTGAGTTTTCATA.............................................2711.00101000
..............................GCTCCAAGA---ACTTAGAAATCTAT.............................................................................................................................................................................................................................2311.00101000
..................................................................................................................................................................................................................................TTCATATCTCTCACCCACA................................1911.00101000
................................................................................................................................................................................................................GCATAGATAAAGTGAGTTTTCATA.............................................2411.00101000
............................................................................................................TAAAACTGTCCTATAGACACGGCTGCCTT............................................................................................................................................2911.00101000
..........................................................................CACCTATCCA-CCTCGCCGCCT.....................................................................................................................................................................................2111.00101000
...........................................................................................CGCCATCCTGAATTCTCTAAAACTG.................................................................................................................................................................2511.00100010
...................................................................................................................................................................................................................................TCATATCTCTCACCCACAGAAGCT..........................2411.00100010
..........TGCAATGACTCCTAGGGGTTGCTCCA.................................................................................................................................................................................................................................................2611.00101000
......................................A---ACTTAGAAATCTATTCAAACAGACCA.................................................................................................................................................................................................................2711.00101000
.................................................................CCACCACCTCACCTATCCA-CCTCG...........................................................................................................................................................................................2411.00100010
....................................................................CCACCTCACCTATCCA-CCTCGCCGC.......................................................................................................................................................................................2511.00101000
............................................................................................................................................................................................................................TGAGTTTTCATATCTCTCACCCACAG...............................2611.00101000
.........TTGCAATGACTCCTAGGGGTTGCTC...................................................................................................................................................................................................................................................2511.00101000
..............................................................................................................................................................................................................TTGCATAGATAAAGTGAGTTTTCATAT............................................2711.00100010
..........................................................................CACCTATCCA-CCTCGCCGCCATCC..................................................................................................................................................................................2411.00101000
..TACAAATTTGCAATGACTCCTAGGG..........................................................................................................................................................................................................................................................2511.00100010
...............................................................................................................................................................................................................TGCATAGATAAAGTGAGTTTTCATAA............................................2611.00100010
.................................................................................................CCTGAATTCTCTAAAACTGTCCTATAGA........................................................................................................................................................2811.00101000
..............................................AGAAATCTATTCAAACAGACCACCACCT...........................................................................................................................................................................................................2811.00101000
.................................................................................................................................................................................................................................TTTCATATCTCTCACCCACAGAAGCA..........................2611.00101000
.........TTGCAATGACTCCTAGGGGTTGCT....................................................................................................................................................................................................................................................2411.00100010
......................TAGGGGTTGCTCCAAGA---ACTTAGAA...................................................................................................................................................................................................................................2511.00101000
..........................................ACTTAGAAATCTATTCAAACAGAC...................................................................................................................................................................................................................2411.00101000
..................................................................CACCACCTCACCTATCCA-CCTCGCCGT.......................................................................................................................................................................................2711.00100010
...........................................................................................CGCCATCCTGAATTCTCTAAAACTGTC...............................................................................................................................................................2711.00100010
....................................................CTATTCAAACAGACCACCACCTCACC.......................................................................................................................................................................................................2611.00101000
.................................................................................................................................................................................TAGCAACAGGAGAATATTTATTACT...........................................................................25200.8016040120
................................................................................................................................................................................................................................................CCACAGAAGCTGCTCAAGAG--A-------GG----C24200.7515000150
..............................................................................................................................................................................................................................................ACCCACAGAAGCTGCTCAAGAG--A-------GG----C26200.6012000120
................................................................................TCCA-CCTCGCCGCCATCCTGAATTCTC.........................................................................................................................................................................27150.60909000
......................................................................................................................................................................................................TACTTCATTTGCATAGATAAAGTGAGT....................................................27170.53904050
.............................................................................................................................................................................................................................................CACCCACAGAAGCTGCTCAAGAG--A-------GG----.26200.40800170
................................................................................................................................................................................TTAGCAACAGGAGAATATTTATTACT...........................................................................26200.40801070
...............................................................................................................................................................................................TATTTATTACTTCATTTGCATAGA..............................................................24190.37703040
.................................................................................................................................................................TTAGAAAGCATTCCCTTAGCAACAGGA.........................................................................................27200.35706100
......................................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTGCTCAAG...................28200.35705020
.......................................................................................TCGCCGCCATCCTGAATTCTCTAAAAC...................................................................................................................................................................27150.33505000
...................................................................................................................................................................................................TATTACTTCATTTGCATAGATAAAG.........................................................25190.32602040
............................................................................................................................................................................................................................................TCACCCACAGAAGCTGCTCAAGAG--A-------GG----.27200.30601050
........................................................................................CGCCGCCATCCTGAATTCTCTAAAAC...................................................................................................................................................................26150.27404000
..................................................................................................................................................................................................TTATTACTTCATTTGCATAGATAAAG.........................................................26190.26504010
.......................................................................................................................................TTTTTCTTTTTCTCCC---------ATTAGAAAGCA..........................................................................................................2740.25100010
...................................................................................................................................TGCCTTTTTCTTTTTCTCCC---------ATTAGAA..............................................................................................................2740.25101000
...................................................................................................................................TGCCTTTTTCTTTTTCTCCC---------ATT..................................................................................................................2340.25101000
..........................................................................................................................................TTCTTTTTCTCCC---------ATTAGAAAGCAT.........................................................................................................2540.25101000
.........................................................................................................................................TTTCTTTTTCTCCC---------ATTAGA...............................................................................................................2040.25101000
......................................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTGCTCAAGA..................29200.20404000
........................................................................................................................................................................................................................................TCTCTCACCCACAGAAGCTGCTCAAGA..................27200.20404000
........................................................................................................................................................................................................................................TCTCTCACCCACAGAAGCTGCTCAAG...................26200.20402020
.................................................................................................................................................................................................TTTATTACTTCATTTGCATAGATAAAG.........................................................27180.17303000
..........TGCAATGACTCCTAGGAA.........................................................................................................................................................................................................................................................1860.17100010
...............................................................................................................................................................................................TATTTATTACTTCATTTGCATAGAT.............................................................25190.16302010
......................................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTGCT.......................24200.15302010
..................................................................................................................................................................TAGAAAGCATTCCCTTAGCAACAGGAG........................................................................................27200.15300201
......................................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTGCTCAA....................27200.15302100
.................................................................................................................................................................................................................................................CACAGAAGCTGCTCAAGAG--A-------GG----.22200.15301020
......................................................................................................................................................................................................................................TATCTCTCACCCACAGAAGCTG.........................22200.15302010
...............................................................................................................................................................................................................................................CCCACAGAAGCTGCTCAAGAG--A-------GG----.24200.15300030
..............................................................................TATCCA-CCTCGCCGCCATCCTGAA..............................................................................................................................................................................24150.13201010
................................................................................TCCA-CCTCGCCGCCATCCTGAATTCTCT........................................................................................................................................................................28150.13202000
..............................................................................TATCCA-CCTCGCCGCCATCCTGAATT............................................................................................................................................................................26150.13202000
..............................................................................TATCCA-CCTCGCCGCCATCCTGAATTCT..........................................................................................................................................................................28150.13202000
..................................................................................CA-CCTCGCCGCCATCCTGAATTCTCT........................................................................................................................................................................26150.13202000
...............................................................................................................................................................................................................................................CCCACAGAAGCTGCTCAAGAG--A-------.......22200.10202000
....................................................................................................................................................................GAAAGCATTCCCTTAGCAACAGGAGAA......................................................................................27200.10202000
..............................................................................................................................................TTTTCTCCC---------ATTAGAAAGCATTCCCT....................................................................................................26200.10202000
droMoj3
ATTGTTTTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTGTATAAGGTTTTTTTTCATATCTAACATTTATAAAA----------------------AT----TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTTTTCTTTTTT-----------------------------------------------------------------------------------------------------------------------------------------AT---------ATAGGAAAGCATTTCTCTACAAATGAGAAAACA-----------------------------------------------------------------------------TT----TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTCATTCCCTAAAGCTGCTGA---------------A----GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................TGCAAAACTCTCATTCCCTAAAGC...........................24111.731901340000110
..................................................................................................................................................................................................................................TGCAAAACTCTCATTCCCTAAAGCTGC........................27110.8290800000100
............................................................................................................................................................................................................................TGAGTCTGCAAAACTCTCATTCCC.................................24110.6470700000000
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGC................................................24120.5870700000000
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCT..................................................22120.5060500001000
................................................................................................................................................................................................................................TCTGCAAAACTCTCATTCCCTAAAGC...........................26110.4550210000020
........GGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTC.........................................23120.4250500000000
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTG.................................................23120.3340400000000
.................................................................................................................................................................................................................................CTGCAAAACTCTCATTCCCTAAAGC...........................25110.2730300000000
.......................................................................................................................................................................................................................................AACTCTCATTCCCTAAAGCTGCTGA---------------A----G27110.2730300000000
..........................................................................................................................................................................................................................................TCTCATTCCCTAAAGCTGCTGA---------------A----G24110.2730300000000
........GGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCT........................................24120.2530300000000
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCA...............................................25120.2530300000000
....................................................................................................................................................................................................................................CAAAACTCTCATTCCCTAAAGCTGC........................25110.1820200000000
................................................................................................................................................................................................................................................TCCCTAAAGCTGCTGA---------------A----G18110.1820200000000
..............................................................................................................................................................................................................................................ATTCCCTAAAGCTGCTGA---------------A----G20110.1820000000020
.....................................................................................................................................................................................................................................AAAACTCTCATTCCCTAAAGCTGC........................24110.1820200000000
.TTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGC................................................23120.1720200000000
........GGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTC.......................................25120.1720200000000
......GAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTC.........................................25120.1720200000000
.TTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCA...............................................24120.1720200000000
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTC...................................................21120.1720200000000
..........T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTC.........................................21130.1521100000000
...GAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACT..........................................27130.1520200000000
...GAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAA.............................................24140.1420200000000
....AAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGC................................................20140.1420200000000
....AAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAA.............................................23140.1420100001000
...GAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCA...............................................22140.1420200000000
.............................................................................................................................................................................................................................................CATTCCCTAAAGCTGCTGA---------------A----.20110.0910000001000
.....................................................................................................................................................................................................................................AAAACTCTCATTCCCTAAAGC...........................21110.0910100000000
............................................................................................................................................................................................................................................TCATTCCCTAAAGCTGCTGA---------------A----G22110.0910100000000
............................................................................................................................................................................................................................TGAGTCTGCAAAACTCTCATTCCCT................................25110.0910100000000
..................................................................................................................................................................................................................................TGCAAAACTCTCATTCCCTAAAG............................23110.0910100000000
....................................................................................................................................................................................................................................CAAAACTCTCATTCCCTAAAGCTGCT.......................26110.0910100000000
...............................................................................................................................................................................................................................GTCTGCAAAACTCTCATTCCCTAAAGC...........................27110.0910100000000
.............................................................................................................................................................................................................................GAGTCTGCAAAACTCTCATTCCC.................................23110.0910100000000
..................................................................................................................................................................................................................................TGCAAAACTCTCATTCCCTAAAGCTG.........................26110.0910100000000
....................................................................................................................................................................................................................................CAAAACTCTCATTCCCTAAAGC...........................22110.0910100000000
..........................................................................................................................................................................................................................................TCTCATTCCCTAAAGCTGCTG......................21110.0910100000000
.........................................................................................................................................................................................................................................CTCTCATTCCCTAAAGCTGCTGA---------------A----G25110.0910100000000
.......................................................................................................................................................................................................................................AACTCTCATTCCCTAAAGCTGCTGA---------------A----.26110.0910100000000
..................................................................................................................................................................................................................................TGCAAAACTCTCATTCCCTAAA.............................22110.0910100000000
........................................................................................................................................................................................................................TGAGTGAGTCTGCAAAACTCTCATTCCC.................................28110.0910100000000
.............................................................................................................................................................................................................................................CATTCCCTAAAGCTGCTGA---------------A----G21110.0910100000000
.....................................................................................................................................................................................................................................AAAACTCTCATTCCCTAAAGCTGCTGA---------------A----G29110.0910100000000
.......................................................................................................................................................................................................................................AACTCTCATTCCCTAAAGCTG.........................21110.0910100000000
..............................................................................................................................................................................................................................AGTCTGCAAAACTCTCATTCCC.................................22110.0910100000000
.......................................................................................................................................................................................................................................AACTCTCATTCCCTAAAGCTGCTG......................24110.0910100000000
..TGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTA.................................................21120.0810100000000
........GGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTCAT.....................................27120.0810100000000
...GAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTC.........................................28120.0810100000000
..TGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCT..................................................20120.0810000001000
.........GT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTC.........................................22120.0810100000000
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGT....................................................20120.0810100000000
..........................................................................................................................................................................................................................................TCTCATTCCCTAAAGCTGC........................19120.0810000100000
..TGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAA..............................................24120.0810100000000
..TGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCA...............................................23120.0810100000000
.TTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGT....................................................19120.0810100000000
........GGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTCATT....................................28120.0810100000000
.TTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAA............................................27120.0810100000000
.TTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAA.............................................26120.0810100000000
..TGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGC................................................22120.0810000001000
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAA.............................................27120.0810000000010
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAA..............................................26120.0810100000000
........GGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTCA......................................26120.0810100000000
TTTGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAA............................................28120.0810100000000
........................................................................................................................................................................................................................TGAGTGAGTCTGCAAAACTCTCATT....................................25130.0810100000000
........................................................................................................................................................................................................................TGAGTGAGTCTGCAAAACTC.........................................20130.0810100000000
..........T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTC.......................................23130.0810100000000
....AAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACT..........................................26130.0810000001000
........GGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACT..........................................22130.0810100000000
..........T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCT........................................22130.0810100000000
........GGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAAC...........................................21140.0710100000000
...GAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCT...............................................22140.0710100000000
....AAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTG.................................................19140.0710100000000
.........GT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAAC...........................................20140.0710000001000
...GAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTC...................................................18140.0710100000000
droPer2
TTAGAAGAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTGAGTCTGCAAAACTCTCATTCCCTAAAGCTGCTGAAGTTATT-------GG----CSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................TGCAAAACTCTCATTCCCTAAAGCTGC........................27200.102020000
droAna3
ATTATGGATTTTAAATTGGTCT-------------AAGC---ATTTA--AGTC----TTGCAATAAGACAATCTCGTCTTCCCAGCCTACCATCCATTGCTGGCTCT-----------------------------------------------------------------------------GTGAAAACG-----------------------------------------------------------------------------TTTTACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................TC----TTGCAATAAGACAATCTCGTCTTCC...................................................................................................................................................................................................27201.40280280000
...............................................................TAAGACAATCTCGTCTTCCCAGCCTAC...........................................................................................................................................................................................27200.357700000
..........................................................TGCAATAAGACAATCTCGTCTTCCC..................................................................................................................................................................................................25200.153030000
...............................................................TAAGACAATCTCGTCTTCCCAGCCT.............................................................................................................................................................................................25200.102200000
..............................................................................TTCCCAGCCTACCATCCATTGCTGGC.............................................................................................................................................................................26200.051010000
..............................................................................................CATTGCTGGCTCT-----------------------------------------------------------------------------GTGAAAACG-----------------------------------------------------------------------------TTT....25200.051010000
.............................................................AATAAGACAATCTCGTCTTCCCAGCC..............................................................................................................................................................................................26200.051100000
.............................................................................................CCATTGCTGGCTCT-----------------------------------------------------------------------------GTGAAAACG-----------------------------------------------------------------------------TT.....25200.051100000
droBip1
TACTTTCTCCCT-----------------------------------------------------------------------------------------------------------------------------------TTCCTCCTGGAGAAAGAACTAGAAGGCATTCCCTTAGC-----------------------------------------------------------------------------------------AA----CSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCTCACTA-------------------------------------------------------------ATTCATTTATGCA-AATCCCCGGCCTGTCAATTTCTTAACAACTTTTCTTTAAACACAGCCAGCTCTTTCTTTC-----------------------------------------------------------------------------------------------------------------------------TT----TSizeHit CountTotal NormTotal
No Reads
droEle1
GCCATCCTGA--------------------------------------------------------------------------------------------AGCCGCTGAA--------------------------------------------------------GCGGT--------------------------------------------------------------------------------CCTACAA---CCGCGGACG----CSizeHit CountTotal NormTotal
No Reads
droRho1
AGGGCAAATTTGCATTTATTACTTGGCGTTGTTTTTGGATATTTTTAAATATTTATTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT-TAGASizeHit CountTotal NormTotal
No Reads
droBia1
AAAAATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT----TSizeHit CountTotal NormTotal
No Reads
droTak1
ATTAGGGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------AATTACCCTAAAAACAGGAAAATATTTCTTATT--------------------------------------------------------------------TC----ASizeHit CountTotal NormTotal
No Reads
droEug1
CTTTAGAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTAAATATTTATTATTAAATATAAATAAATAAAATA------------------------------------------------AA----TSizeHit CountTotal NormTotal
No Reads
dm3
GAGCAGAT-TTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTCATTTGGCTAGATGAGATGTATTTTTGTA--------------------------------------TC----TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................TTTGGCTAGATGAGATGTATT...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......T-TTAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTCATTTGGCTAGATGAG..........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ATTTGGCTAGATGAGATGTATTTTT................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................TATTTCATTTGGCTAGATGAGATGTA.....................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CATTTGGCTAGATGAGATGTATTT..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTTCATTTGGCAG................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
droYak3
CCACTCTA----------------------------------------------------CCGCACTACCACTCCACCTCTCCG-CCGCCCCGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----CSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TATTTGGTTCTT-----------------------------------------------------------------------------------------------------------------------------------TACTAT----------------------------------------------------------CATAGGAATAAAGAAGGTTATTATGCCTGGCACCAATTGAAGCTGTTCTAGAC----------AG----GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 08:04 AM