ID:

dwi_372

 Coordinate:

scf2_1100000004401:1062781-1062931 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dwil\GK10356-cds]; exon [dwil_GLEANR_10292:2]; intron [Dwil\GK10356-in]

No Repeatable elements found

mature
  1. dwi_4847  scf2_1100000003102:971-998 +
  2. dwi_372  scf2_1100000004401:1062894-1062921 +
  3. dwi_4224  scf2_1100000004511:1442619-1442646 +
  4. dwi_4577  scf2_1100000004521:8871096-8871123 -
  5. dwi_5251  scf2_1100000004577:851654-851681 +
  6. dwi_5313  scf2_1100000004762:5162798-5162825 +
  7. dwi_4712  scf2_1100000004762:5841724-5841751 +
  8. dwi_4860  scf2_1100000004943:4202002-4202029 -
  9. dwi_4894  scf2_1100000004943:4745443-4745470 +
  10. scf2_1100000004909:148004-148031 +
  11. dwi_4474  scf2_1100000004909:241563-241590 +
  12. scf2_1100000004913:37102-37129 +
  13. dwi_4426  scf2_1100000004949:652823-652850 +
  14. dwi_4762  scf2_1100000004953:935921-935948 +
  15. dwi_4595  scf2_1100000004954:4734208-4734235 -
  16. dwi_5218  scf2_1100000004956:824801-824828 +
  17. dwi_5255  scf2_1100000004958:226868-226895 +
  18. dwi_4566  scf2_1100000004961:4006048-4006075 +
  19. scf2_1100000004967:2358062-2358089 +
  20. scf2_1100000004968:1329761-1329788 +
  21. dwi_4788  scf2_1100000004762:6029412-6029439 -
  22. scf2_1100000004909:210187-210214 -
  23. dwi_4777  scf2_1100000004909:1780112-1780139 -
  24. dwi_4998  scf2_1100000004513:4515416-4515443 -
  25. dwi_5070  scf2_1100000004913:112189-112216 -
  26. scf2_1100000004965:783373-783400 -
star
  1. dwi_4224  scf2_1100000004511:1442540-1442560 +
  2. dwi_4525  scf2_1100000004512:769267-769287 +
  3. dwi_4398  scf2_1100000004521:1598887-1598907 +
  4. dwi_5313  scf2_1100000004762:5162720-5162740 +
  5. dwi_5036  scf2_1100000004768:2411532-2411552 +
  6. dwi_5203  scf2_1100000004888:519924-519944 +
  7. dwi_5220  scf2_1100000004888:889879-889899 +
  8. scf2_1100000004909:209963-209983 +
  9. dwi_4540  scf2_1100000004909:518192-518212 +
  10. dwi_5400  scf2_1100000004913:111965-111985 +
  11. dwi_4426  scf2_1100000004949:652745-652765 +
  12. dwi_4557  scf2_1100000004949:1347446-1347466 +
  13. scf2_1100000004953:1032819-1032839 +
  14. dwi_5218  scf2_1100000004956:824723-824743 +
  15. dwi_5255  scf2_1100000004958:226789-226809 +
  16. scf2_1100000004958:2026542-2026562 +
  17. dwi_4566  scf2_1100000004961:4005970-4005990 +
  18. scf2_1100000004961:5228072-5228092 +
  19. dwi_4222  scf2_1100000004965:374728-374748 +
  20. dwi_5067  scf2_1100000004968:211579-211599 +
  21. dwi_372  scf2_1100000004401:1062816-1062836 +
  22. dwi_4774  scf2_1100000004762:6029188-6029208 +
  23. dwi_4584  scf2_1100000004943:1244352-1244372 +
  24. scf2_1100000004909:147925-147945 +
  25. scf2_1100000004913:37024-37044 +
  26. dwi_4579  scf2_1100000004954:4733984-4734004 +
  27. dwi_4236  scf2_1100000004511:1442850-1442870 -
  28. dwi_4415  scf2_1100000004521:1599215-1599235 -
  29. dwi_5259  scf2_1100000004577:851885-851905 -
  30. dwi_4677  scf2_1100000004762:5163029-5163049 -
  31. dwi_4732  scf2_1100000004762:5841955-5841975 -
  32. dwi_5048  scf2_1100000004768:2411841-2411861 -
  33. scf2_1100000004947:1103886-1103906 -
  34. dwi_4554  scf2_1100000004909:518501-518521 -
  35. scf2_1100000004913:37333-37353 -
  36. scf2_1100000004913:38310-38330 -
  37. dwi_5070  scf2_1100000004913:112275-112295 -
  38. dwi_4445  scf2_1100000004949:653073-653093 -
  39. dwi_4780  scf2_1100000004953:936152-936172 -
  40. dwi_4632  scf2_1100000004954:4835493-4835513 -
  41. dwi_4589  scf2_1100000004961:4006279-4006299 -
  42. dwi_4160  scf2_1100000004963:4376606-4376626 -
  43. dwi_4238  scf2_1100000004965:375038-375058 -
  44. scf2_1100000004965:783459-783479 -
  45. scf2_1100000004967:2358293-2358313 -
  46. scf2_1100000004967:2958484-2958504 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAAATGTCTCCGAAATCAATGTCGAGAAATTCAAGCATTGCTAGTGAAAGGTAAGTCAATACATATATTTTTTGGGTACATGTCATAACGCCCAGTGTCATAAGGCCCTTGGGCCTTATGACACACATTTTGCGACATAAAGCCCACGGGCGCAATGACACTTTTAAATGTGACATAAAGCACGCCGGACTTTATTTCACTTTTTTATGGGCGTTATGACACGATTAAAGGGCAAACAATTACATTTTTTA
*************************************************************************************...(((((.(((((((((((((....))))))))))))).......((........))....)))))..(((.(((........))).)))...............************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V119
head
 V117
male body		 M020
head
........................................................................................................................................................................................................................TGACACGATTAAAGGGCAAACAAT........... 24 0 20 1.60 32 17 15 0 0 0
...............................................................................................................................................................................................TTATTTCACTTTTTTATGGGCGTTA................................... 25 0 20 1.40 28 16 12 0 0 0
...................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGGACT............................................................ 28 0 20 0.95 19 16 2 0 0 1
...........................................................................................................................................................................................................................CACGATTAAAGGGCAAACAATTACATT..... 27 0 20 0.80 16 8 8 0 0 0
...................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGG............................................................... 25 0 20 0.65 13 12 1 0 0 0
...................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGGAC............................................................. 27 0 20 0.60 12 9 3 0 0 0
................................................................................................................................................................................................................................TTAAAGGGCAAACAATTACATTTTT.. 25 0 20 0.55 11 10 1 0 0 0
.................................................................................................................................................................................................................................TAAAGGGCAAACAATTACATTTTT.. 24 0 20 0.40 8 5 3 0 0 0
...........................................................................................................................................................................................................................CACGATTAAAGGGCAAACAATTACAT...... 26 0 20 0.30 6 5 0 0 1 0
..............................................................................................................................................................................................................................GATTAAAGGGCAAACAATTACATT..... 24 0 20 0.25 5 0 5 0 0 0
................................................................................................................................................................................................TATTTCACTTTTTTATGGGCGTTA................................... 24 0 20 0.20 4 0 4 0 0 0
...................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGGA.............................................................. 26 0 20 0.20 4 4 0 0 0 0
..............................................................................................................................................................................................................................GATTAAAGGGCAAACAATTACATTTTT.. 27 0 20 0.20 4 4 0 0 0 0
...........................................................................................................................................................................................................................CACGATTAAAGGGCAAACAATTACA....... 25 0 20 0.20 4 1 3 0 0 0
................................................................................................................................................................................................TATTTCACTTTTTTATGGGCGTTATG................................. 26 0 20 0.20 4 2 2 0 0 0
........................................................................................................................................................................................CCGGACTTTATTTCACTTTTTTATGGG........................................ 27 0 20 0.20 4 0 1 0 0 3
.........................................................................................................................................................................................................................GACACGATTAAAGGGCAAACAATTACATT..... 29 0 20 0.20 4 4 0 0 0 0
................................................................................................................................................................................................TATTTCACTTTTTTATGGGCGTTAT.................................. 25 0 20 0.20 4 1 3 0 0 0
........................................................................................................................................................................................................................TGACACGATTAAAGGGCAAACAATTACAT...... 29 0 20 0.20 4 4 0 0 0 0
.....................................................................................TAACGCCCAGTGTCATAAGGC................................................................................................................................................. 21 0 20 0.15 3 0 0 0 3 0
...............................................................................................................................................................................................TTATTTCACTTTTTTATGGGCGTT.................................... 24 0 20 0.15 3 1 2 0 0 0
....................................................................................................................................................................TAAATGTGACATAAAGCACGCCGGACT............................................................ 27 0 20 0.15 3 2 1 0 0 0
................................................................................................................................TTTGCGACATAAAGCCCACGGGCGCAA................................................................................................ 27 0 20 0.15 3 3 0 0 0 0
..................................................................................................................................................................................................TTTCACTTTTTTATGGGCGTTATGACA.............................. 27 0 20 0.15 3 3 0 0 0 0
..................................................................................................................................................................................................TTTCACTTTTTTATGGGCGTTATGA................................ 25 0 20 0.15 3 1 2 0 0 0
...........................................................................................................................................................................................GACTTTATTTCACTTTTTTATGGGCG...................................... 26 0 20 0.15 3 1 2 0 0 0
..............................................................................CATGTCATAACGCCCAGTGTC........................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0
..........................................................................................................................................................................................................TTTTATGGGCGTTATGACACGAT.......................... 23 0 20 0.10 2 1 0 0 1 0
..........................................................................................................................................................................................................TTTTATGGGCGTTATGACA.............................. 19 0 20 0.10 2 0 1 0 0 1
.............................................................................................AGTGTCATACAGCCCTTGGA.......................................................................................................................................... 20 3 20 0.10 2 2 0 0 0 0
.........................................................................................................................................................................................CGGACTTTATTTCACTTTTTTATGGGCG...................................... 28 0 20 0.10 2 2 0 0 0 0
..............................................................................................................................................................................................TTTATTTCACTTTTTTATGGGCGTT.................................... 25 0 20 0.10 2 2 0 0 0 0
.............................................................................................AGTGTCATAAGGCCCTTGGGC......................................................................................................................................... 21 0 20 0.10 2 0 0 2 0 0
..........................................................................................................................................................................................GGACTTTATTTCACTTTTTTATGGGCG...................................... 27 0 20 0.10 2 2 0 0 0 0
....................................................................................................................TATGACACACATTTTGCGACATAAAG............................................................................................................. 26 0 20 0.10 2 2 0 0 0 0
................................................................................TGTCATAACGCCCAGTGTCATAAGG.................................................................................................................................................. 25 0 20 0.10 2 0 2 0 0 0
.........................................................................................................................................................................................................TTTTTATGGGCGTTATGACACGAT.......................... 24 0 20 0.10 2 0 2 0 0 0
...............................................................................................................................TTTTGCGACATAAAGCCCACGGGCGCA................................................................................................. 27 0 20 0.10 2 1 1 0 0 0
..................................................................................................................................................................TTTAAATGTGACATAAAGCACGCCGGAC............................................................. 28 0 20 0.10 2 2 0 0 0 0
.........................................................................................................................................................................................................................GACACGATTAAAGGGCAAACAATTACAT...... 28 0 20 0.10 2 2 0 0 0 0
...................................................................................CATAACGCCCAGTGTCATAAGGCCCT.............................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0
.............................................................................................................TGGGCCTTATGACACACATTTTGCGAC................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0
....................................................................................................................................................................TAAATGTGACATAAAGCACGCCGGACTT........................................................... 28 0 20 0.10 2 2 0 0 0 0
......................................................................................................................................................CGCAATGACACTTTTAAATGTGACA............................................................................ 25 0 20 0.10 2 0 2 0 0 0
............................................................................................CAGTGTCATAAGGCCCTTGGGCC........................................................................................................................................ 23 0 20 0.10 2 0 1 1 0 0
.................................................................................................................................................................TTTTAAATGTGACATAAAGCACGCCG................................................................ 26 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................................TATTTCACTTTTTTATGGGCGTTATGA................................ 27 0 20 0.10 2 0 2 0 0 0
.....................................................................................................................................................................................................................TTATGACACGATTAAAGGGCAAACAAT........... 27 0 20 0.10 2 0 0 2 0 0
...................................................................................................................................................................................................TTCACTTTTTTATGGGCGTTATGACA.............................. 26 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................................................................TTAAAGGGCAAACAATTACATTTTTT. 26 0 20 0.10 2 1 1 0 0 0
..............................................................................................................................................................................................TTTATTTCACTTTTTTATGGGCGT..................................... 24 0 20 0.10 2 2 0 0 0 0
........................................................................................................................................................................................................................TGACACGATTAAAGGGCAAACAATTAC........ 27 0 20 0.10 2 2 0 0 0 0
..................................................................................................................................TGCGACATAAAGCCCACGGGCG................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................CACGGGCGCAATGACACTTTTAAATG................................................................................. 26 0 20 0.05 1 0 1 0 0 0
...............................................................................ATGTCATAACGCCCAGTG.......................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................TTTTGCGACATAAAGCCCACGGGCGCAA................................................................................................ 28 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................TATTTCACTTTTTTATGGG........................................ 19 0 20 0.05 1 0 1 0 0 0
....................................................................................................................TATGACACACATTTTGCGACATAAAGCC........................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................ACTTTATTTCACTTTTTTATGGGCG...................................... 25 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................AGCACGCCGGACTTTATTTCACTT................................................. 24 0 20 0.05 1 0 0 0 0 1
...........................................................................................................................................................................................GACTTTATTTCACTTTTTTATGGGCGA..................................... 27 1 20 0.05 1 1 0 0 0 0
................................................................................TGCCATAACGCCCAGTGTCATAAGG.................................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
.....................................................................................TAACGCCCAGTGTCATAAGG.................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................................................................................TTAAAGGGCAAACAATTAC........ 19 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................................TTATGACACGATTAAAGGGCAA................ 22 0 20 0.05 1 1 0 0 0 0
.....................................................................................TAACGCCCAGTGTCATAAGGCC................................................................................................................................................ 22 0 20 0.05 1 0 0 0 0 1
.................................................................................................................................................................................................................................TAAAGGGCAAACAATTACATTTTTT. 25 0 20 0.05 1 0 1 0 0 0
...................................................................................CATAACGCCCAGTGTCATAAGGCCCTTG............................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................CTTTGTTATGGGCGTCTTGAC............................... 21 3 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................TGACATAAAGCACGCCGGACTTTATT....................................................... 26 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................TGACACGATTAAAGGGCAAACAATTACA....... 28 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................................................GTAAAGGGCAAACAATTACATTTTT.. 25 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................TATGGGCGTTATGACACGATTAAAGT.................... 26 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................TGCGACATAAAGCCCACGGGCGCAA................................................................................................ 25 0 20 0.05 1 0 1 0 0 0
......................................................................................AACGCCCAGTGTCATAAGGCC................................................................................................................................................ 21 0 20 0.05 1 0 0 1 0 0
............................................................................................................................................AGCCCACGGGCGCAATGACACTTT....................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................TTATGACACGATTAAAGGGCAAACA............. 25 0 20 0.05 1 1 0 0 0 0
.....................................................................................TGACGCCCAGTGTCATGGGG.................................................................................................................................................. 20 3 20 0.05 1 0 0 1 0 0
.................................................................................................................................TTGCGACATAAAGCCCACGGGCGCA................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
...................................................................................................................TTATGACACACATTTTGCGACA.................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................TTGCGACATAAAGCCCACGGGCGCAAG............................................................................................... 27 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................TAAATGTGACATAAAGCACGCCGGAC............................................................. 26 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................TTTCACTTTTTTATGGGCGTTATGACAC............................. 28 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................CACTTTTTTATGGGCGTTATGACACGA........................... 27 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................................ACACGATTAAAGGGCAAACAATTACC....... 26 1 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................AAAGGGCAAACAATTGCATTTTT.. 23 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................TTATTTCACTTTTTTATGGGCGTTATGA................................ 28 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................TTTATTTCACTTTTTTATGGGCGTTATG................................. 28 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................................TTCACTTTTTTATGGGCGTTATGACAC............................. 27 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................................GACACGATTAAAGGGCAAA............... 19 0 20 0.05 1 1 0 0 0 0
..................................................................................TCATAACGCCCAGTGTCATAAG................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0
.............................................................................................AGTGTCATAAGGCCCTTGG........................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................ACTTTATTTCACTTTTTTATGGGCGT..................................... 26 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................TGCCACGATTAAAGGGCAAACAAT........... 24 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................TTTAAATGTGACATAAAGCACGCCGGACT............................................................ 29 0 20 0.05 1 1 0 0 0 0
...................................................................................................................TTATGACACACATTTTGCGACATAAAGC............................................................................................................ 28 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................AGCACGCCGGACTTTATTTCACTTT................................................ 25 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................ATGGGCGTTATGACACGAT.......................... 19 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................................................TATTTCACTTTTTTATGGGCGTT.................................... 23 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................TTTAAATGTGACATAAAGCACGCCG................................................................ 25 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................................CACGATTAAAGGGCAAACAATTACATTT.... 28 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................ACATAAAGCCCACGGGCGCAATGA............................................................................................. 24 0 20 0.05 1 1 0 0 0 0
.............................................................................................AGTGTCATAAGGCCCTTGGGCC........................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................TTTCACTTTTTAATGGGCGTTATGA................................ 25 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................CACACATTTTGCGACATAAAGCCCACG....................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
...............................................................................ATGTCAGAACGCGCAGAGT......................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0
........................................................................................................................................................................................................................TGACACGATTAAAGGGCAAACAATT.......... 25 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................TATGACACGATTAAAGGGCAAACA............. 24 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................GACTTTATTTCACTTTTTTATGGGCGTTA................................... 29 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................AAAGGGCAAACAATTACATTTTTT. 24 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................TGACACGATTAAAGGGCAAACAAC........... 24 1 20 0.05 1 0 0 0 1 0
....................................................................................................................................................................TAAATGTGACATAAAGCACGCCGG............................................................... 24 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................TTATGACACGATTAAAGGGCAAACAA............ 26 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................TTTCACTTTTTTATGGGCGTTATGAC............................... 26 0 20 0.05 1 0 1 0 0 0
........................................................................TGGGTACATGTCATAACGCCCAGT........................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................TTTTTATGGGCGTTATGACACGA........................... 23 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................TGTGACATAAAGCACGCCGGACTTTA......................................................... 26 0 20 0.05 1 1 0 0 0 0
......................................................................................AACGCCCAGTGTCATACGG.................................................................................................................................................. 19 1 20 0.05 1 0 0 1 0 0
...............................................................................................................................................................................................................TGGGCGTTATGACACGATTAAAGGGCA................. 27 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................................ACACGATTAAAGGGCAAACAATTACA....... 26 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................TGACACGATTAAAGGGCCAACAAT........... 24 1 20 0.05 1 0 1 0 0 0
................................................................................TGTCATAACGCCCAGTGTCATA..................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................TTTTTATGGGCGTTATGACACG............................ 22 0 20 0.05 1 0 0 1 0 0
............................................................................................................................................................................................................TTATGGGCGTTATGACACGATTAAAG..................... 26 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................................CACGATTAACGGGCAAACAATTACAT...... 26 1 20 0.05 1 0 1 0 0 0
................................................................................................................................TTTGCGACATAAAGCCCACGGGCGCAATG.............................................................................................. 29 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................................................................................TTAAAGCGCAAACAATTACATTTTT.. 25 1 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................CATAAAGCACGCCGGACTTT.......................................................... 20 0 20 0.05 1 0 0 0 1 0
................................................................................................................................................................................................................................TTAAAGGGCAAACAATTACATTTTTTA 27 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................TTGCGACATAAAGCCCACGGGCGCAAT............................................................................................... 27 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................TTTATGGGCGTTATGACACGATTAAAGG.................... 28 0 20 0.05 1 0 0 0 1 0
............................................................................TACATGTCATAACGCCCAGTGT......................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
...............................................................................................TGTCATAAGGCCCTTGGGC......................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................ATTAAAGGGCAAACAATTACATTTTT.. 26 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................TTCACTTTTTTATGGGCGTTATGAC............................... 25 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................................GTTATGACACGATTAAAGGGC.................. 21 0 20 0.05 1 0 1 0 0 0
..............................................................................................GTGTCATAAGGCCCTTGGGCCTT...................................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0
.........................................................................................................................................................................................................TTTTTATGGGCGTTATGACAC............................. 21 0 20 0.05 1 0 1 0 0 0
................................................................................TGTCATAACGCCCAGTGTCAT...................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................TTTTTTATGGGCGTTATGACACG............................ 23 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................TTTATTTCACTTTTTTATGGGCGTTAT.................................. 27 0 20 0.05 1 0 1 0 0 0
.....................................................................................TAACGCCCAGTGTCATAAGGCCCT.............................................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................GACTTTATTTCACTTTTTTATGGGCGT..................................... 27 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

CTTTACAGAGGCTTTAGTTACAGCTCTTTAAGTTCGTAACGATCACTTTCCATTCAGTTATGTATATAAAAAACCCATGTACAGTATTGCGGGTCACAGTATTCCGGGAACCCGGAATACTGTGTGTAAAACGCTGTATTTCGGGTGCCCGCGTTACTGTGAAAATTTACACTGTATTTCGTGCGGCCTGAAATAAAGTGAAAAAATACCCGCAATACTGTGCTAATTTCCCGTTTGTTAATGTAAAAAAT
************************************************************...(((((.(((((((((((((....))))))))))))).......((........))....)))))..(((.(((........))).)))...............************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body		 V119
head
 M020
head
.............................................................................TGTACAGTATTGCGGGTCACAGTATT.................................................................................................................................................... 26 0 20 0.95 19 19 0 0 0 0
.............................................................................TGTACAGTATTGCGGGTCACAGTAT..................................................................................................................................................... 25 0 20 0.45 9 9 0 0 0 0
.............................................................................................................................................CGGGTGCCCGCGTTACTGTGAAAAT..................................................................................... 25 0 20 0.40 8 8 0 0 0 0
..............................................................................GTACAGTATTGCGGGTCACAGTAT..................................................................................................................................................... 24 0 20 0.35 7 0 7 0 0 0
.....CAGAGGCTTCAGGTACAGCTA................................................................................................................................................................................................................................. 21 3 4 0.25 1 0 0 1 0 0
........................................................................ACCCATGTACAGTATTGCGGGTCACAGT....................................................................................................................................................... 28 0 20 0.20 4 3 1 0 0 0
............................................................................................................................................TCGGGTGCCCGCGTTACTGTGA......................................................................................... 22 0 20 0.15 3 0 3 0 0 0
.....................................................................................................................................................................................................................AATACTGTGCTAATTTCCCGTTTGT............. 25 0 20 0.15 3 0 3 0 0 0
..............................................................................................................................................GGGTGCCCGCGTTACTGTGAAAATT.................................................................................... 25 0 20 0.15 3 3 0 0 0 0
.........................................................................TCCATGTACAGTATTGCGGGTCACAGT....................................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0
.................................................................................................................................................................................................................CCGCAATACTGTGCTAATTTCCCGTT................ 26 0 20 0.10 2 0 2 0 0 0
..........................................................................CCATGTACAGTATTGCGGGTCACAGTATT.................................................................................................................................................... 29 0 20 0.10 2 0 2 0 0 0
.................................................................................................................................................................................CTCGTGCGGCCTGAAATAAAGTG................................................... 23 1 20 0.10 2 0 2 0 0 0
......................................................................................................................ACTGTGTGTAAAACGCTGTATTTCGGGT......................................................................................................... 28 0 20 0.10 2 1 1 0 0 0
....................................................................................................................................................................................................................CAATACTGTGCTAATTTCCCGTT................ 23 0 20 0.10 2 0 2 0 0 0
.................................................................................................................................................................................TTCGTGCGGCCTGAAATAAAGTGA.................................................. 24 0 20 0.05 1 0 0 1 0 0
...................................................................................................................................................................................CGTGCGGCCTGAAATAAAGTGAA................................................. 23 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................................CTGTGCTAATTTCCCGTTTGTTAAT......... 25 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................GAGTGAAAAACGCTGTATGTC............................................................................................................. 21 3 20 0.05 1 0 1 0 0 0
...............................................................................................................CCGGAATACTGTGTGTAAAACGCTGT.................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
.........................................................................CCCATGTACAGTATTGCGGGTCAAAGT....................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
.........................................................................CCCATGTACAGTATTGCGGGTCACAGT....................................................................................................................................................... 27 0 20 0.05 1 0 0 0 1 0
.....................................................................................................................................CTGTATTTCGGGTGCCCGCGTTA............................................................................................... 23 0 20 0.05 1 0 0 0 1 0
........................................................................................GCGGGTCACAGTGTTCCGGGA.............................................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................TTCGGGTGCCCGCGTTACTGTGAAAAT..................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................GCTAATTTCCCGTTTGTTAATG........ 22 0 20 0.05 1 0 1 0 0 0
..........................................................................CCATGTACAGTATTGCGGGTCACAG........................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................GTGCGGCCTGAAATAAAGTGA.................................................. 21 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................................CCCGCAATACTGTGCTAATTTCCCGT................. 26 0 20 0.05 1 0 1 0 0 0
..............................................................................GTACAGTATTGCGGGCCACAGTATT.................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................ATTTCGTGCGGCCTGAAATAAAGT.................................................... 24 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................TCGGGTGCCCGCGTTACTGTGAAAATT.................................................................................... 27 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................ACACTGTATTTCGTGCGGCCTGAAAT......................................................... 26 0 20 0.05 1 1 0 0 0 0
................................................................................................................CCGAATACTGTGTGTAAAA........................................................................................................................ 19 1 20 0.05 1 1 0 0 0 0
........................................................................................................CGGGAACCCGGAATACTGTGTGTAA.......................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
.......................................................................................................................................GTATTTCGGGTGCCCGCGTTACTGT........................................................................................... 25 0 20 0.05 1 0 1 0 0 0
.........................................................................................CGGGTCACAGTATTCCGGGA.............................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 1
.................................................................................................................................................................................TTCGTGCGGCCTGAAATAAAGT.................................................... 22 0 20 0.05 1 0 1 0 0 0
.........................................................................CCCATGTACAGTATTGCGGGT............................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................GGGTGCCCGCGTTACTGTGAAAAT..................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.........................................................................CCCATGTACAGTATTGCGGGTCAC.......................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
..........................................................................CCATGTACAGTATTGCCGGTCACAGTAT..................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
............................................................................ATGTACAGTATTGCGGGTCGC.......................................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0
................................................................................................................................................................................TTTCGTGCGGCCTGAAATAAAGTG................................................... 24 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................CGTGCGGCCTGAAATAAAGTGA.................................................. 22 0 20 0.05 1 0 0 1 0 0
.........................................................................................CGGGTCACAGTATTCCGGGAA............................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004401:1062731-1062981 + dwi_372 GAAATGTCTCCGA---AATCAATGTCGAGAAATTCAAGCATTGCTAGTGAAAGGTAAGTCAAT-ACATATATTTTTTGGGTACATGT---------CATAACGCCCAGTGTCATAAGGCCCTTGGGCCTTATGACACACATT-TTGCGACATAAAGCCCACGGGCGCAATGACACTT-TTAAATGTGACATAAAGCACGCCGGACTT--TATTTCACTTTT-TTATGGGCGTTATGACACGATTAAAGGGC-------------------AAACAATTACATTTTTTA
droVir3 scaffold_12963:5900326-5900408 + GACATGTCGCTGCATGCAATCCAATCAGTAAATCTCTGCA-CTCCAATTAAAGGTAAGTTCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------ACATATACCTTCTGTCTATAT---------------------------------------------
droMoj3 scaffold_6482:632414-632623 - CATATACTATAAG---GGT--------------------------------------------------------------ACATGT---------CATAACGCCCAGTGTCATAAGGCCCATGGGCGCTAAGACACACATTTTTGCGACATAAAGCCCACGGGCGCAATGACACTT-TTAAATGTGACATAAAGCACGCCGGACTT--TATTTCACTTTT-TTACGGGCGTTATGACACGATTAAAGGGCTTTAAAAAATATGAAAACAAAACAATTACATTTTTAA
droGri2 scaffold_14853:4398983-4399038 + GAGATGTCACCAA---AGTCAATGTCCAGGAACTCAAGCATTGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_98:13247-13373 + GGT------------------------------------------------------------------------------ACATTT---------CATAACGCCCAGTGTCATAACGCCCACGG--------------------------------------GTCTTATGACACTT-TTAAAAGGGAC--AGCGCCCGCGG--CGTTATATGTCACTTTT--TTTGGGCGTTATAACACTATAAGACCCT-------------------AAACGATT----------
droPer2 scaffold_85:224445-224572 + GGT------------------------------------------------------------------------------ACATTT---------CATAACGCCCAGTGTCATAACGCCCACGG--------------------------------------GTCTTATGACACTT-TTAAAAGTGAC--AGCGCCCGCGG--CGTTATATGTCACTTTT-TTTTGGGCGTTATAACACTATAAGACCCT-------------------AAACGATT----------
droAna3 scaffold_12883:563-692 + TTTGTAT--------------------------------------------------------------------------GTATATC---AAATATATAACGCCCAGTGTCATAGCACCCACGG--------------------------------------GCCTTCCGTCACTTTTTGAAAGTGTCATATCGCCCGCGG-GCGC--TATTTCATTTT-CTTGTGGGCCTTATGACACTATGAGAAG---------------------------------------
droBip1 scf7180000392337:10052-10167 - GGG-----------------------------------------------------------------------------TGCATGG---------CATAACGCCCAGTGTCATAGCGCCCGCGG--------------------------------------GCGTTCCGTCACTTTTTAAAAGTGACATATCGCCCGCGG-GCGC--------ATTTTTCTTGTGGGCTTTATGACACTATGAGAAG---------------------------------------
droKik1 scf7180000299893:10423-10582 - GGG-----------------------------------------------------------------------------TGCATGG---------CATAACGCCCAGTGTCATAGCGCCCACGGGCGCTATGACACAAACATTTGTGTCATAGCGCCCGCGGGCGTTCCGACTCTTTTTGAAAGTGTCATATCGCCCGCGG-GCGC--TATATCATTTTTCTTGTGGGCCTTACGACATTATGAAAAG---------------------------------------
droFic1 scf7180000454069:12337-12506 + TGTGTGTG--CTG---GG--------------------------------------------------------------TGCATGG---------CATAACGCCCAGTGTCATAGCGCCCACGGGCGCTATGACACGAACAATTGTGTCATTGCGCCCGCGGGCGTTCCGTCACTTTTTGAAAGTGTCATATCGCCCGCGG-GCGC--TATGTCATTTTTCTTGTGGGCCTTATGATACTATGAGAAG---------------------------------------
droEle1 scf7180000490996:397086-397141 + GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000763590:2420-2497 - CAACTAGTGACAGT--GAAACATAAACCAAAAAATATAAAGTGCAAGT---------------------------------GCAGGT---------CAAAGCACTCAATTACATAGTGCTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302126:1985939-1985995 - GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------
droTak1 scf7180000416008:526427-526628 - AAAATGTGTCCTG---CGCCCACATCTTTAAAGATTTCCG-AGAAGTATAAATGCAATTTTGTT--GT-------------GTATATTTAGGG--------------GTG-CATAACGCCCGCGGGCGTTATGACACACTCAAAAGAGTCATAGGGCCCGTGGGTCTTCTGACACAC-TCAAAAGTGTCATAACGCCCGCAG-GCGC--TATGTCACTTTTTTTGAGGGCCTTATGACAC------------------------------------------------
droEug1 scf7180000408012:3019-3146 - TTCATCGGG-----------------------------------------------------------------------TGCATGG---------CATAATGCCCAGTGTCATAGCGCCCACGG--------------------------------------GCGTTCCGTCACTTTTTGAAAGTGTCATATCGCCCGCGG-GCGC--TATGTCATTTTTCTTGTGGGCCTTATGACACTATGAGAAG---------------------------------------
dm3 chr3R:11703935-11704053 + GGG-----------------------------------------------------------------------------TACGTGT---------CTTAACGCCTGTTGTTATAATGCTCATGGCCGATGTGCCACCCATTTTTGATTCAAAAGACCCATGGGCGTTATTTCACTT-TTGAAAGTGTCACAACACCCTGCTGACT----------------------------------------------------------------------------------
droSim2 x:2969578-2969633 + GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_10:2921610-2921665 + GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:5167177-5167232 - GAGATGTCGCCAA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:626238-626293 + GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GAAATGTCTCCGA---AATCAATGTCGAGAAATTCAAGCATTGCTAGTGAAAGGTAAGTCAAT-ACATATATTTTTTGGGTACATGT---------CATAACGCCCAGTGTCATAAGGCCCTTGGGCCTTATGACACACATT-TTGCGACATAAAGCCCACGGGCGCAATGACACTT-TTAAATGTGACATAAAGCACGCCGGACTT--TATTTCACTTTT-TTATGGGCGTTATGACACGATTAAAGGGC-------------------AAACAATTACATTTTTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................TGACACGATTAAAGGGC-------------------AAACAAT...........24201.60320170150
..............................................................................................................................................................................................................T--TATTTCACTTTT-TTATGGGCGTTA......................................................25201.40280160120
..................................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGGACT..................................................................................28200.9519116020
.............................................................................................................................................................................................................................................CACGATTAAAGGGC-------------------AAACAATTACATT.....27200.801608080
..................................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGG.....................................................................................25200.6513012010
..................................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGGAC...................................................................................27200.601209030
..................................................................................................................................................................................................................................................TTAAAGGGC-------------------AAACAATTACATTTTT..25200.5511010010
...................................................................................................................................................................................................................................................TAAAGGGC-------------------AAACAATTACATTTTT..24200.40805030
.............................................................................................................................................................................................................................................CACGATTAAAGGGC-------------------AAACAATTACAT......26200.30605100
................................................................................................................................................................................................................................................GATTAAAGGGC-------------------AAACAATTACATT.....24200.25500050
.................................................................................................................................................................................................................TATTTCACTTTT-TTATGGGCGTTA......................................................24200.20400040
..................................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGGA....................................................................................26200.20404000
................................................................................................................................................................................................................................................GATTAAAGGGC-------------------AAACAATTACATTTTT..27200.20404000
.............................................................................................................................................................................................................................................CACGATTAAAGGGC-------------------AAACAATTACA.......25200.20401030
.................................................................................................................................................................................................................TATTTCACTTTT-TTATGGGCGTTATG....................................................26200.20402020
.......................................................................................................................................................................................................CCGGACTT--TATTTCACTTTT-TTATGGG...........................................................27200.20430010
...........................................................................................................................................................................................................................................GACACGATTAAAGGGC-------------------AAACAATTACATT.....29200.20404000
.................................................................................................................................................................................................................TATTTCACTTTT-TTATGGGCGTTAT.....................................................25200.20401030
..........................................................................................................................................................................................................................................TGACACGATTAAAGGGC-------------------AAACAATTACAT......29200.20404000
..................................................................................................TAACGCCCAGTGTCATAAGGC.........................................................................................................................................................................21200.15300300
..............................................................................................................................................................................................................T--TATTTCACTTTT-TTATGGGCGTT.......................................................24200.15301020
...................................................................................................................................................................................TAAATGTGACATAAAGCACGCCGGACT..................................................................................27200.15302010
.............................................................................................................................................T-TTGCGACATAAAGCCCACGGGCGCAA.......................................................................................................................27200.15303000
...................................................................................................................................................................................................................TTTCACTTTT-TTATGGGCGTTATGACA.................................................27200.15303000
...................................................................................................................................................................................................................TTTCACTTTT-TTATGGGCGTTATGA...................................................25200.15301020
..........................................................................................................................................................................................................GACTT--TATTTCACTTTT-TTATGGGCG.........................................................26200.15301020
..................................................................................CATGT---------CATAACGCCCAGTGTC................................................................................................................................................................................21200.10202000
...........................................................................................................................................................................................................................TT-TTATGGGCGTTATGACACGAT.............................................23200.10201100
...........................................................................................................................................................................................................................TT-TTATGGGCGTTATGACA.................................................19200.10210010
........................................................................................................................................................................................................CGGACTT--TATTTCACTTTT-TTATGGGCG.........................................................28200.10202000
.............................................................................................................................................................................................................TT--TATTTCACTTTT-TTATGGGCGTT.......................................................25200.10202000
..........................................................................................................AGTGTCATAAGGCCCTTGGGC.................................................................................................................................................................21200.10200002
.........................................................................................................................................................................................................GGACTT--TATTTCACTTTT-TTATGGGCG.........................................................27200.10202000
.................................................................................................................................TATGACACACATT-TTGCGACATAAAG....................................................................................................................................26200.10202000
....................................................................................TGT---------CATAACGCCCAGTGTCATAAGG..........................................................................................................................................................................25200.10200020
..........................................................................................................................................................................................................................TTT-TTATGGGCGTTATGACACGAT.............................................24200.10200020
............................................................................................................................................TT-TTGCGACATAAAGCCCACGGGCGCA........................................................................................................................27200.10201010
................................................................................................................................................................................T-TTAAATGTGACATAAAGCACGCCGGAC...................................................................................28200.10202000
...........................................................................................................................................................................................................................................GACACGATTAAAGGGC-------------------AAACAATTACAT......28200.10202000
................................................................................................CATAACGCCCAGTGTCATAAGGCCCT......................................................................................................................................................................26200.10202000
..........................................................................................................................TGGGCCTTATGACACACATT-TTGCGAC..........................................................................................................................................27200.10200020
...................................................................................................................................................................................TAAATGTGACATAAAGCACGCCGGACTT--...............................................................................28200.10202000
....................................................................................................................................................................CGCAATGACACTT-TTAAATGTGACA..................................................................................................25200.10200020
.........................................................................................................CAGTGTCATAAGGCCCTTGGGCC................................................................................................................................................................23200.10200011
...............................................................................................................................................................................TT-TTAAATGTGACATAAAGCACGCCG......................................................................................26200.10202000
.................................................................................................................................................................................................................TATTTCACTTTT-TTATGGGCGTTATGA...................................................27200.10200020
.......................................................................................................................................................................................................................................TTATGACACGATTAAAGGGC-------------------AAACAAT...........27200.10200002
....................................................................................................................................................................................................................TTCACTTTT-TTATGGGCGTTATGACA.................................................26200.10202000
..................................................................................................................................................................................................................................................TTAAAGGGC-------------------AAACAATTACATTTTTT.26200.10201010
.............................................................................................................................................................................................................TT--TATTTCACTTTT-TTATGGGCGT........................................................24200.10202000
..........................................................................................................................................................................................................................................TGACACGATTAAAGGGC-------------------AAACAATTAC........27200.10202000
................................................................................................................................................TGCGACATAAAGCCCACGGGCG..........................................................................................................................22200.05101000
..............................................................................................................................................................CACGGGCGCAATGACACTT-TTAAATG.......................................................................................................26200.05100010
...................................................................................ATGT---------CATAACGCCCAGTG..................................................................................................................................................................................18200.05101000
............................................................................................................................................TT-TTGCGACATAAAGCCCACGGGCGCAA.......................................................................................................................28200.05101000
.................................................................................................................................................................................................................TATTTCACTTTT-TTATGGG...........................................................19200.05100010
.................................................................................................................................TATGACACACATT-TTGCGACATAAAGCC..................................................................................................................................28200.05101000
...........................................................................................................................................................................................................ACTT--TATTTCACTTTT-TTATGGGCG.........................................................25200.05101000
.................................................................................................................................................................................................AGCACGCCGGACTT--TATTTCACTT.....................................................................24200.05110000
..........................................................................................................................................................................................................GACTT--TATTTCACTTTT-TTATGGGCGA........................................................27200.05101000
..................................................................................................TAACGCCCAGTGTCATAAGG..........................................................................................................................................................................20200.05100010
..................................................................................................................................................................................................................................................TTAAAGGGC-------------------AAACAATTAC........19200.05100010
.......................................................................................................................................................................................................................................TTATGACACGATTAAAGGGC-------------------AA................22200.05101000
..................................................................................................TAACGCCCAGTGTCATAAGGCC........................................................................................................................................................................22200.05110000
...................................................................................................................................................................................................................................................TAAAGGGC-------------------AAACAATTACATTTTTT.25200.05100010
................................................................................................CATAACGCCCAGTGTCATAAGGCCCTTG....................................................................................................................................................................28200.05101000
.........................................................................................................................................................................................TGACATAAAGCACGCCGGACTT--TATT...........................................................................26200.05101000
..........................................................................................................................................................................................................................................TGACACGATTAAAGGGC-------------------AAACAATTACA.......28200.05101000
...............................................................................................................................................................................................................................TATGGGCGTTATGACACGATTAAAGT.......................................26200.05100010
................................................................................................................................................TGCGACATAAAGCCCACGGGCGCAA.......................................................................................................................25200.05100010
...................................................................................................AACGCCCAGTGTCATAAGGCC........................................................................................................................................................................21200.05100001
..........................................................................................................................................................AGCCCACGGGCGCAATGACACTT-T.............................................................................................................24200.05101000
.......................................................................................................................................................................................................................................TTATGACACGATTAAAGGGC-------------------AAACA.............25200.05101000
...............................................................................................................................................TTGCGACATAAAGCCCACGGGCGCA........................................................................................................................25200.05101000
................................................................................................................................TTATGACACACATT-TTGCGACA.........................................................................................................................................22200.05101000
...............................................................................................................................................TTGCGACATAAAGCCCACGGGCGCAAG......................................................................................................................27200.05101000
...................................................................................................................................................................................TAAATGTGACATAAAGCACGCCGGAC...................................................................................26200.05101000
...................................................................................................................................................................................................................TTTCACTTTT-TTATGGGCGTTATGACAC................................................28200.05100010
......................................................................................................................................................................................................................CACTTTT-TTATGGGCGTTATGACACGA..............................................27200.05100010
............................................................................................................................................................................................................................................ACACGATTAAAGGGC-------------------AAACAATTACC.......26200.05101000
..............................................................................................................................................................................................................T--TATTTCACTTTT-TTATGGGCGTTATGA...................................................28200.05101000
.............................................................................................................................................................................................................TT--TATTTCACTTTT-TTATGGGCGTTATG....................................................28200.05100010
....................................................................................................................................................................................................................TTCACTTTT-TTATGGGCGTTATGACAC................................................27200.05100010
...........................................................................................................................................................................................................................................GACACGATTAAAGGGC-------------------AAA...............19200.05101000
......................................................................................T---------CATAACGCCCAGTGTCATAAG...........................................................................................................................................................................22200.05100010
..........................................................................................................AGTGTCATAAGGCCCTTGG...................................................................................................................................................................19200.05101000
...........................................................................................................................................................................................................ACTT--TATTTCACTTTT-TTATGGGCGT........................................................26200.05101000
................................................................................................................................................................................T-TTAAATGTGACATAAAGCACGCCGGACT..................................................................................29200.05101000
................................................................................................................................TTATGACACACATT-TTGCGACATAAAGC...................................................................................................................................28200.05101000
.................................................................................................................................................................................................AGCACGCCGGACTT--TATTTCACTTT....................................................................25200.05101000
................................................................................................................................................................................................................................ATGGGCGTTATGACACGAT.............................................19200.05100010
.................................................................................................................................................................................................................TATTTCACTTTT-TTATGGGCGTT.......................................................23200.05101000
................................................................................................................................................................................T-TTAAATGTGACATAAAGCACGCCG......................................................................................25200.05101000
.............................................................................................................................................................................................................................................CACGATTAAAGGGC-------------------AAACAATTACATTT....28200.05101000
....................................................................................................................................................ACATAAAGCCCACGGGCGCAATGA....................................................................................................................24200.05101000
..........................................................................................................AGTGTCATAAGGCCCTTGGGCC................................................................................................................................................................22200.05101000
......................................................................................................................................CACACATT-TTGCGACATAAAGCCCACG..............................................................................................................................27200.05101000
..........................................................................................................................................................................................................................................TGACACGATTAAAGGGC-------------------AAACAATT..........25200.05101000
........................................................................................................................................................................................................................................TATGACACGATTAAAGGGC-------------------AAACA.............24200.05100010
..........................................................................................................................................................................................................GACTT--TATTTCACTTTT-TTATGGGCGTTA......................................................29200.05101000
....................................................................................................................................................................................................................................................AAAGGGC-------------------AAACAATTACATTTTTT.24200.05101000
..........................................................................................................................................................................................................................................TGACACGATTAAAGGGC-------------------AAACAAC...........24200.05100100
...................................................................................................................................................................................TAAATGTGACATAAAGCACGCCGG.....................................................................................24200.05101000
.......................................................................................................................................................................................................................................TTATGACACGATTAAAGGGC-------------------AAACAA............26200.05101000
...................................................................................................................................................................................................................TTTCACTTTT-TTATGGGCGTTATGAC..................................................26200.05100010
............................................................................TGGGTACATGT---------CATAACGCCCAGT...................................................................................................................................................................................24200.05100010
..........................................................................................................................................................................................................................TTT-TTATGGGCGTTATGACACGA..............................................23200.05101000
.......................................................................................................................................................................................TGTGACATAAAGCACGCCGGACTT--TA.............................................................................26200.05101000
.................................................................................................................................................................................................................................TGGGCGTTATGACACGATTAAAGGGC-------------------A.................27200.05101000
............................................................................................................................................................................................................................................ACACGATTAAAGGGC-------------------AAACAATTACA.......26200.05101000
....................................................................................TGT---------CATAACGCCCAGTGTCATA.............................................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................TTT-TTATGGGCGTTATGACACG...............................................22200.05100001
..............................................................................................................................................................................................................................TTATGGGCGTTATGACACGATTAAAG........................................26200.05100010
.............................................................................................................................................T-TTGCGACATAAAGCCCACGGGCGCAATG.....................................................................................................................29200.05100010
............................................................................................................................................................................................CATAAAGCACGCCGGACTT--T..............................................................................20200.05100100
..................................................................................................................................................................................................................................................TTAAAGGGC-------------------AAACAATTACATTTTTTA27200.05100010
...............................................................................................................................................TTGCGACATAAAGCCCACGGGCGCAAT......................................................................................................................27200.05101000
............................................................................................................................................................................................................................T-TTATGGGCGTTATGACACGATTAAAGG.......................................28200.05100100
................................................................................TACATGT---------CATAACGCCCAGTGT.................................................................................................................................................................................22200.05101000
............................................................................................................TGTCATAAGGCCCTTGGGC.................................................................................................................................................................19200.05101000
.................................................................................................................................................................................................................................................ATTAAAGGGC-------------------AAACAATTACATTTTT..26200.05101000
....................................................................................................................................................................................................................TTCACTTTT-TTATGGGCGTTATGAC..................................................25200.05100010
......................................................................................................................................................................................................................................GTTATGACACGATTAAAGGGC-------------------..................21200.05100010
...........................................................................................................GTGTCATAAGGCCCTTGGGCCTT..............................................................................................................................................................23200.05100001
..........................................................................................................................................................................................................................TTT-TTATGGGCGTTATGACAC................................................21200.05100010
....................................................................................TGT---------CATAACGCCCAGTGTCAT..............................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................TTTT-TTATGGGCGTTATGACACG...............................................23200.05101000
.............................................................................................................................................................................................................TT--TATTTCACTTTT-TTATGGGCGTTAT.....................................................27200.05100010
..................................................................................................TAACGCCCAGTGTCATAAGGCCCT......................................................................................................................................................................24200.05100010
..........................................................................................................................................................................................................GACTT--TATTTCACTTTT-TTATGGGCGT........................................................27200.05101000
droVir3
GACATGTCGCTGCATGCAATCCAATCAGTAAATCTCTGCA-CTCCAATTAAAGGTAAGTTCAT---------------------------------------------------------------------------------------------------------------------------------------------------------------ACATATACCTTCTGTCTATAT---------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CATATACTATAAG---GGT--------------------------------------------------------------ACATGT---------CATAACGCCCAGTGTCATAAGGCCCATGGGCGCTAAGACACACATTTTTGCGACATAAAGCCCACGGGCGCAATGACACTT-TTAAATGTGACATAAAGCACGCCGGACTT--TATTTCACTTTT-TTACGGGCGTTATGACACGATTAAAGGGCTTTAAAAAATATGAAAACAAAACAATTACATTTTTAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................TATGAAAACAAAACAATTACATTTT...25121.00211400070
...................................................................................................................................................................................................................TTTCACTTTT-TTACGGGCGTTATG....................................................24113.00131300000
...................................................................................................................................................................................................................TTTCACTTTT-TTACGGGCGTTATGACAC................................................28110.0010600013
...................................................................................................................................................................................................................TTTCACTTTT-TTACGGGCGTTATGA...................................................2517.007410002
...................................................................................................................................................................................................................TTTCACTTTT-TTACGGGCGTTATGAC..................................................2617.007210013
...................................................................................................................................................................................................................TTTCACTTTT-TTACGGGCGTTATGACA.................................................2716.006500010
....................................................................................................................................................................................................................................................................TATGAAAACAAAACAATTACATTT....2415.005100040
....................................................................................................................................................................................................................................................................TATGAAAACAAAACAATTACATTTTTA.2713.003300000
....................................................................................................................................................................................................................TTCACTTTT-TTACGGGCGTTATGACAC................................................2713.003100002
...................................................................................................................................................................................................................TTTCACTTTT-TTACGGGCGTTATGACACG...............................................2913.003300000
..TATACTATAAG---GGT--------------------------------------------------------------ACATGT---------CATAACGCC.......................................................................................................................................................................................2912.002000020
.........................................................................................................................................................................TGACACTT-TTAAATGTGACATAAAGC............................................................................................2622.004400000
.........................................................................................................................................................................TGACACTT-TTAAATGTGACATAAAGCA...........................................................................................2722.004400000
....................................................................................................................................................................................................................................................................TATGAAAACAAAACAATTACATTTTC..2612.002100010
......................................................................................T---------CATAACGCCCAGTGTCATAAGGCCCA......................................................................................................................................................................2742.008701000
.....................................................................................................................................................................................................................................................................ATGAAAACAAAACAATTACATTT....2312.002200000
......................................................................................T---------CATAACGCCCAGTGTCATAAGGCC........................................................................................................................................................................2541.757110050
......................................................................................................................................................................................................................................................................TGAAAACAAAACAATTACATTTTT..2411.001100000
.............................................................................................................................................................................................................TT--TATTTCACTTTT-TTACGGGCGTT.......................................................2511.001100000
...................................................................................................................................................................................................................TTTCACTTTT-TTACGGGC..........................................................1811.001000010
.....................................................................................................................................................................................................................................................................ATGAAAACAAAACAATTACATTTT...2411.001100000
.........................................................................................................................................................................TGACACTT-TTAAATGTGACATAAAGCAC..........................................................................................2821.002200000
.ATATACTATAAG---GGT--------------------------------------------------------------ACATG..........................................................................................................................................................................................................2011.001100000
.................................................................................................................................................................................................................TATTTCACTTTT-TTACGGGCGTTA......................................................2411.001000010
.........................................................................................................................................................................TGACACTT-TTAAATGTGACATAAAG.............................................................................................2521.002100010
....................................................................................TGT---------CATAACGCCCAGTGTCATAAGGCC........................................................................................................................................................................2741.004010030
.............................................................................................................................................................................................................TT--TATTTCACTTTT-TTACGGGCGTTA......................................................2611.001100000
....................................................................................................................................................................................................................................................................TATGAAAACAAAACAATTACATC.....2311.001000010
...................................................................................................................................................................................................................TTTCACTTTT-TTACGGGCGTTATTG...................................................2511.001100000
......................................................................................T---------CATAACGCCCAGTGTCATAAGGCCC.......................................................................................................................................................................2640.753200010
.....................................................................................................................................ACACACATTTTTGCGACATAAAGCC..................................................................................................................................2540.753000030
......................................................................................................................................................................................ATGTGACATAAAGCACGCCGG.....................................................................................2120.501100000
..................................................................................................................................................................................TTAAATGTGACATAAAGCACGCCGG.....................................................................................2520.501100000
.......................................................................................................................................ACACATTTTTGCGACATAAAGCCC.................................................................................................................................2440.502000020
.....................................................................................................................................ACACACATTTTTGCGACATAAAGCCCA................................................................................................................................2740.502200000
..........................................................................................................................................................................GACACTT-TTAAATGTGACATAAAGC............................................................................................2520.501100000
...........................................................................................................................................................................ACACTT-TTAAATGTGACATAAAGCA...........................................................................................2520.501100000
.......................................................................................................................................ACACATTTTTGCGACATAAAGCCCACG..............................................................................................................................2740.251100000
......................................................................................T---------CATAACGCCCAGTGTCATAAGGC.........................................................................................................................................................................2440.251000001
.....................................................................................................................................ACACACATTTTTGCGACATAAAGCCCAC...............................................................................................................................2840.251100000
......................................................................................T---------CATAACGCCCAGTGTCATAAGGCCCAT.....................................................................................................................................................................2840.251100000
....................................................................................TGT---------CATAACGCCCAGTGTCATAAGG..........................................................................................................................................................................2540.251100000
..........................................................................................................................................CATTTTTGCGACATAAAGCCC.................................................................................................................................2140.251100000
......................................................................................................................................CACACATTTTTGCGACATAAAGCCCA................................................................................................................................2640.251100000
.................................................................................................................................TAAGACACACATTTTTGCGACATAAA.....................................................................................................................................2640.251100000
................................................................................................................................................TGCGACATAAAGCCCACGGGCGCAATG.....................................................................................................................2740.251100000
.....................................................................................................................................ACACACATTTTTGCGACATAAAGCCC.................................................................................................................................2640.251000010
.................................................................................................................................TAAGACACACATTTTTGCGACATAAAG....................................................................................................................................2740.251100000
....................................................................................TGT---------CATAACGCCCAGTGTCATAAGGCCCA......................................................................................................................................................................2940.251100000
............................................................................................................................................TTTTTGCGACATAAAGCCCACGGGCGC.........................................................................................................................2750.201000010
.............................................................................................................................................TTTTGCGACATAAAGCCCACGGGCGCA........................................................................................................................2750.201000001
...............................................................................................................................GCTAAGACACACATTTTTGCGACA.........................................................................................................................................2450.201100000
..................................................................................................TAACGCCCAGTGTCATAAGGCCCATGGGC.................................................................................................................................................................2950.201100000
...............................................................................................................................................TTGCGACATAAAGCCCACGGGCGCA........................................................................................................................2550.201100000
.............................................................................................................................................TTTTGCGACATAAAGCCCACGGG............................................................................................................................2350.201000010
...............................................................................................................................................TTGCGACATAAAGCCCACGGGCGCAA.......................................................................................................................2650.201100000
droGri2
GAGATGTCACCAA---AGTCAATGTCCAGGAACTCAAGCATTGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........AA---AGTCAATGTCCAGGAACTCA............................................................................................................................................................................................................................................................2211.00101
dp5
GGT------------------------------------------------------------------------------ACATTT---------CATAACGCCCAGTGTCATAACGCCCACGG--------------------------------------GTCTTATGACACTT-TTAAAAGGGAC--AGCGCCCGCGG--CGTTATATGTCACTTTT--TTTGGGCGTTATAACACTATAAGACCCT-------------------AAACGATT----------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GGT------------------------------------------------------------------------------ACATTT---------CATAACGCCCAGTGTCATAACGCCCACGG--------------------------------------GTCTTATGACACTT-TTAAAAGTGAC--AGCGCCCGCGG--CGTTATATGTCACTTTT-TTTTGGGCGTTATAACACTATAAGACCCT-------------------AAACGATT----------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TTTGTAT--------------------------------------------------------------------------GTATATC---AAATATATAACGCCCAGTGTCATAGCACCCACGG--------------------------------------GCCTTCCGTCACTTTTTGAAAGTGTCATATCGCCCGCGG-GCGC--TATTTCATTTT-CTTGTGGGCCTTATGACACTATGAGAAG---------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................TATATAACGCCCAGTGTCATAGCACC........................................................................................................................................................................2617.007070000
..............................................................................................TATATAACGCCCAGTGTCATAGCACCCAC.....................................................................................................................................................................2913.003030000
..............................................................................................TATATAACGCCCAGTGTCATAGCACCCA......................................................................................................................................................................2812.002020000
................................................................................................TATAACGCCCAGTGTCATAGCACCC.......................................................................................................................................................................2511.001100000
......................................................................................TC---AAATATATAACGCCCAGTGTCATAGC...........................................................................................................................................................................2811.001010000
............................................................................................................................................................................................................CGC--TATTTCATTTT-CTTGTGGGCCT........................................................2511.001010000
..............................................................................................................TCATAGCACCCACGG--------------------------------------GCCTTCCGTC...................................................................................................................2511.001010000
.........................................................................................................CAGTGTCATAGCACCCACGG--------------------------------------GCCTT........................................................................................................................2511.001010000
..TGTAT--------------------------------------------------------------------------GTATATC---AAATATATAACGCC.......................................................................................................................................................................................2611.001010000
.................................................................................................................................................................................................................TATTTCATTTT-CTTGTGGG...........................................................1911.001010000
...................................................................................................AACGCCCAGTGTCATAGCACCCACGG--------------------------------------.............................................................................................................................2611.001100000
............................................................................................................TGTCATAGCACCCACGG--------------------------------------GCCTTCCG.....................................................................................................................2511.001010000
..........................................................................................................AGTGTCATAGCACCCACGG--------------------------------------GCCTTC.......................................................................................................................2511.001010000
.........................................................................................................................ACGG--------------------------------------GCCTTCCGTCACTTTTTGAAAG.......................................................................................................2611.001010000
......T--------------------------------------------------------------------------GTATATC---AAATATATAACGCCCAGT...................................................................................................................................................................................2611.001010000
.....................................................................................................CGCCCAGTGTCATAGCACCCACGG--------------------------------------G............................................................................................................................2511.001010000
..............................................................................................................TCATAGCACCCACGG--------------------------------------GCCTTCCGTCAC.................................................................................................................2711.001100000
............................................................................................AATATATAACGCCCAGTGTCATAGC...........................................................................................................................................................................2511.001010000
...................................................................................................AACGCCCAGTGTCATAGCACCCACGG--------------------------------------G............................................................................................................................2711.001010000
..............................................................................................TATATAACGCCCAGTGTCATAGC...........................................................................................................................................................................2311.001010000
..................................................................................................TAACGCCCAGTGTCATAGCACC........................................................................................................................................................................2211.001010000
.................................................................................................................TAGCACCCACGG--------------------------------------GCCTTCCGTCA..................................................................................................................2311.001100000
..................................................................................................TAACGCCCAGTGTCATAGCACCCAC.....................................................................................................................................................................2511.001010000
.......................................................................................C---AAATATATAACGCCCAGTGTCATAGC...........................................................................................................................................................................2711.001001000
.........................................................................................................................................................................................................G-GCGC--TATTTCATTTT-CTTGTGGGCCT........................................................2711.001010000
.TTGTAT--------------------------------------------------------------------------GTATATC---AAATATATAACGCCC......................................................................................................................................................................................2811.001010000
....TAT--------------------------------------------------------------------------GTATATC---AAATATATAACGCCCAG....................................................................................................................................................................................2711.001010000
....................................................................................................................................................................................GAAAGTGTCATATCGCCCGCG.......................................................................................2140.251100000
.........................................................................................................................................................................................TGTCATATCGCCCGCGG-GCGC--TA.............................................................................2340.251010000
................................................................................................................................................................................TTTTGAAAGTGTCATATCGCCCGCG.......................................................................................2540.251001000
................................................................................................................................................................................TTTTGAAAGTGTCATATCGCCCGCGG-.....................................................................................2640.251001000
.....................................................................................................................................................................................AAAGTGTCATATCGCCCGCGG-.....................................................................................2140.251001000
..................................................................................................................................................................................TTGAAAGTGTCATATCGCCCG.........................................................................................2140.251010000
droBip1
GGG-----------------------------------------------------------------------------TGCATGG---------CATAACGCCCAGTGTCATAGCGCCCGCGG--------------------------------------GCGTTCCGTCACTTTTTAAAAGTGACATATCGCCCGCGG-GCGC--------ATTTTTCTTGTGGGCTTTATGACACTATGAGAAG---------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GGG-----------------------------------------------------------------------------TGCATGG---------CATAACGCCCAGTGTCATAGCGCCCACGGGCGCTATGACACAAACATTTGTGTCATAGCGCCCGCGGGCGTTCCGACTCTTTTTGAAAGTGTCATATCGCCCGCGG-GCGC--TATATCATTTTTCTTGTGGGCCTTACGACATTATGAAAAG---------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGTGTGTG--CTG---GG--------------------------------------------------------------TGCATGG---------CATAACGCCCAGTGTCATAGCGCCCACGGGCGCTATGACACGAACAATTGTGTCATTGCGCCCGCGGGCGTTCCGTCACTTTTTGAAAGTGTCATATCGCCCGCGG-GCGC--TATGTCATTTTTCTTGTGGGCCTTATGATACTATGAGAAG---------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAACTAGTGACAGT--GAAACATAAACCAAAAAATATAAAGTGCAAGT---------------------------------GCAGGT---------CAAAGCACTCAATTACATAGTGCTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-----------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAAATGTGTCCTG---CGCCCACATCTTTAAAGATTTCCG-AGAAGTATAAATGCAATTTTGTT--GT-------------GTATATTTAGGG--------------GTG-CATAACGCCCGCGGGCGTTATGACACACTCAAAAGAGTCATAGGGCCCGTGGGTCTTCTGACACAC-TCAAAAGTGTCATAACGCCCGCAG-GCGC--TATGTCACTTTTTTTGAGGGCCTTATGACAC------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TTCATCGGG-----------------------------------------------------------------------TGCATGG---------CATAATGCCCAGTGTCATAGCGCCCACGG--------------------------------------GCGTTCCGTCACTTTTTGAAAGTGTCATATCGCCCGCGG-GCGC--TATGTCATTTTTCTTGTGGGCCTTATGACACTATGAGAAG---------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GGG-----------------------------------------------------------------------------TACGTGT---------CTTAACGCCTGTTGTTATAATGCTCATGGCCGATGTGCCACCCATTTTTGATTCAAAAGACCCATGGGCGTTATTTCACTT-TTGAAAGTGTCACAACACCCTGCTGACT----------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................CATTTTTGATTCAAAAGACC..................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TGCCACCCATTTTTGATTCAAA.......................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................TCCCGAAACTCAAGCATCGCTAGCGAA.............................................................................................................................................................................................................................................2711.00100000000000010000
droSec2
GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................CCATGTCCCGAAACTCAAGCAT.......................................................................................................................................................................................................................................................2211.0010010
droYak3
GAGATGTCGCCAA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......CGCCAA---AGTCCATGTCCCGA..................................................................................................................................................................................................................................................................2011.00101000000000
droEre2
GAGATGTCGCCCA---AGTCCATGTCCCGAAACTCAAGCATCGCTAGCGAAAGGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:59 PM