ID:

dwi_3683

 Coordinate:

scf2_1100000004954:384406-384477 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.6 -19.3 -19.1

Flybase annnotation

exon [dwil_GLEANR_6387:3]; CDS [Dwil\GK23105-cds]; exon [dwil_GLEANR_6387:2]; CDS [Dwil\GK23105-cds]; intron [Dwil\GK23105-in]

No Repeatable elements found

mature
  1. scf2_1100000013053:1139-1163 -
  2. scf2_1100000005289:833-857 +
  3. scf2_1100000002883:1158-1182 +
  4. scf2_1100000003907:6866-6890 +
  5. scf2_1100000004558:1762581-1762605 -
  6. scf2_1100000004703:57502-57526 -
  7. scf2_1100000004854:63024-63048 -
  8. scf2_1100000004887:207213-207237 -
  9. dwi_3679  scf2_1100000004954:334154-334178 -
  10. dwi_3683  scf2_1100000004954:384428-384452 -
  11. scf2_1100000004954:1883256-1883280 +
  12. scf2_1100000004958:2510582-2510606 -
  13. scf2_1100000004961:3198485-3198509 -
  14. dwi_3901  scf2_1100000004961:4441914-4441938 -
  15. scf2_1100000004961:4878471-4878495 +
star

Sense Strand Reads

##################################################------------------------------------------------------------------------##################################################
CTGTGCGGGAGTTGTCGGCGGATATAGCTCTACTGAGTGAGCCCTATAGAGTAGGAGAAACTGGGTGTACAGTTGCTACCTTGCACCCAGCCTGTCACTGGAGCGTTTCGGAAGCATTGTAGACAGCATCTCGAACGACGCAAAAGGACGCCAAGGTCTCATCATCGGTGGG
**************************************************.((((.....(((((((((..((....))..)))))))))))))...(((((....)))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V118
embryo
 V117
male body
.......................................................................................................CGTTTCGGAAGCATTGTAGACAGC............................................. 24 0 4 2.25 9 6 3 0 0
..........................................................................................................TTCGGAAGCATTGTAGACAGCATC.......................................... 24 0 4 2.00 8 6 2 0 0
..........................................................................................................TTCGGAAGCATTGTAGACAGCATCT......................................... 25 0 4 1.75 7 7 0 0 0
.......................................................................................................CGTTTCGGAAGCATTGTAGACAGCA............................................ 25 0 4 1.00 4 4 0 0 0
.......................................................................................................CGTTTCGGAAGCATTGTAGACAG.............................................. 23 0 4 0.75 3 3 0 0 0
....................................................AGGGGATACTGGGTGTAC...................................................................................................... 18 2 2 0.50 1 0 0 0 1
..........................................................................................................TTCGGAAGCATTGTAGACAGCATCTCGA...................................... 28 0 4 0.50 2 2 0 0 0
.................................................AGTAGGAGAAACTGGGTGTACAGT................................................................................................... 24 0 2 0.50 1 1 0 0 0
.......................................................................................................CGTTTCGGAAGCATTGTAGACAGCATCT......................................... 28 0 4 0.50 2 2 0 0 0
....................................................AGGGGATACTGGGTGTACCG.................................................................................................... 20 3 2 0.50 1 1 0 0 0
...............................................................................................................AAGCATTGTAGACAGCATCTCGAACGA.................................. 27 0 5 0.40 2 2 0 0 0
......................................................................................................................GTAGACAGCATCTCGAACGACG................................ 22 0 5 0.40 2 2 0 0 0
................GGCGGATATAGCTCTACTGAGTGA.................................................................................................................................... 24 0 16 0.38 6 6 0 0 0
..............................TACTGAGTGAGCCCTATAGAGTAGGA.................................................................................................................... 26 0 3 0.33 1 0 0 1 0
..............................TACTGAGTGAGCCCTATAGAGTAGG..................................................................................................................... 25 0 3 0.33 1 1 0 0 0
................GGCGGATATAGCTCTACTGAGTGAGC.................................................................................................................................. 26 0 15 0.27 4 4 0 0 0
...........................................................................CTACCTTGCACCCAGCCTGTCACTG........................................................................ 25 0 15 0.27 4 4 0 0 0
......................................................................................................GCGTTTCGGAAGCATTGTAGACAGC............................................. 25 0 4 0.25 1 1 0 0 0
..........................GCTCTACTGAGTGAGCCCTATAGAGT........................................................................................................................ 26 0 4 0.25 1 1 0 0 0
.........................................................................................................TTTCGGAAGCATTGTAGACAG.............................................. 21 0 4 0.25 1 1 0 0 0
..........................................................................................................TTCGGAAGCATTGTAGACAGCAT........................................... 23 0 4 0.25 1 1 0 0 0
............................................................................................TGTCACTGGAGCGTTTCGGAAGCATTG..................................................... 27 0 4 0.25 1 1 0 0 0
..........................................................................................................TTCGGAAGCATTGTAGACAGCATCTCG....................................... 27 0 4 0.25 1 1 0 0 0
.........................................................................................................TTTCGGAAGCATTGTAGACAGCATCT......................................... 26 0 4 0.25 1 1 0 0 0
...........................................................................................CTGTCACTGGAGCGTTTCGGAAGCATTG..................................................... 28 0 4 0.25 1 1 0 0 0
...........................................................................................................TCGGAAGCATTGTAGACAGCATCT......................................... 24 0 4 0.25 1 1 0 0 0
..........................................................................................................TTCGGAAGCATTGTAGACAGCA............................................ 22 0 4 0.25 1 0 1 0 0
........................................................................................................GTTTCGGAAGCATTGTAGACAGC............................................. 23 0 4 0.25 1 1 0 0 0
................GGCGGATATAGCTCTACTGAGTGAGCCC................................................................................................................................ 28 0 13 0.23 3 3 0 0 0
...........................................................................CTACCTTGCACCCAGCCTGTCACT......................................................................... 24 0 15 0.20 3 2 0 1 0
...............................................................................................................AAGCATTGTAGACAGCATCTCGAAC.................................... 25 0 5 0.20 1 1 0 0 0
...............................................................................................................AAGCATTGTAGACAGCATCTCGA...................................... 23 0 5 0.20 1 0 0 1 0
................GGCGGATATAGCTCTACTGAGTGAGCC................................................................................................................................. 27 0 15 0.20 3 3 0 0 0
.............................................................TGGGTGTACAGTTGCTACCTTGCA....................................................................................... 24 0 5 0.20 1 1 0 0 0
.............................................................TGGGTGTACAGTTGCTACCTTGCAC...................................................................................... 25 0 5 0.20 1 1 0 0 0
..............................................................................................................GAAGCATTGTAGACAGCATCTCGA...................................... 24 0 5 0.20 1 1 0 0 0
......................................................................................................................GTAGACAGCATCTCGAACGACGC............................... 23 0 5 0.20 1 1 0 0 0
..................................................................................................TGGAGCGTTTCGGAAATA........................................................ 18 2 20 0.20 4 4 0 0 0
.................................................................................................TTGGAGCGTTTCGGAAATA........................................................ 19 3 20 0.20 4 4 0 0 0
................GGCGGATATAGCTCTACTGAGTG..................................................................................................................................... 23 0 16 0.19 3 3 0 0 0
.......................................................................................................................................................CAAGGTCTCATCATCGGTGG. 20 0 16 0.19 3 3 0 0 0
................GGCGGATATAGCTCTACTGAGTGAG................................................................................................................................... 25 0 16 0.19 3 3 0 0 0
.................GCGGATATAGCTCTACTGAGTGAGCCC................................................................................................................................ 27 0 13 0.15 2 2 0 0 0
.......................................................................................CAGCCTGTCACTGGAGTGTTTCGG............................................................. 24 1 14 0.14 2 0 0 2 0
...................................................................TACAGTTGCTACCTTGCACCCAGCCTG.............................................................................. 27 0 7 0.14 1 1 0 0 0
...........................................................................CTACCTTGCACCCAGCCTGTCACTGGAG..................................................................... 28 0 14 0.14 2 2 0 0 0
...........................................................................CTACCTTGCACCCAGCCTGTCAC.......................................................................... 23 0 15 0.13 2 2 0 0 0
...........................................................................CTACCTTGCACCCAGCCTGTCA........................................................................... 22 0 15 0.13 2 2 0 0 0
......................................................................................CCAGCCTGTCACTGGAGCGT.................................................................. 20 0 15 0.13 2 2 0 0 0
....................................................................................................................................................CGCCAAGGTCTCATCATCGGTGGG 24 0 15 0.13 2 0 0 2 0
.................GCGGATATAGCTCTACTGAGTG..................................................................................................................................... 22 0 16 0.13 2 2 0 0 0
....................................................................................................................................................CGCCAAGGTCTCATCATCGGTGG. 23 0 16 0.13 2 2 0 0 0
.............................................TTAGAGTAGGAGAAACTGTC........................................................................................................... 20 3 9 0.11 1 0 1 0 0
.................................TGAGTGAGACCTAAAGAGTAGGAGAA................................................................................................................. 26 2 11 0.09 1 0 0 1 0
............................................................................................TGTCACTGGAGTGTTTCGGAAGCATT...................................................... 26 1 12 0.08 1 1 0 0 0
.......................................................................................CAGCCTGTCACTGGAGCGTTTCGGAAG.......................................................... 27 0 13 0.08 1 1 0 0 0
......................TATAGCTCTACTGAGTGAGCCCT............................................................................................................................... 23 0 13 0.08 1 0 0 1 0
............................................................................TACCTTGCACCCAGCCTGTCACTGG....................................................................... 25 0 14 0.07 1 1 0 0 0
.........................................................................TGCTACCTTGCACCCAGCCTGTCACT......................................................................... 26 0 14 0.07 1 1 0 0 0
.......................................................................................CAGCCTGTCACTGGAGCGTTTCGGA............................................................ 25 0 14 0.07 1 1 0 0 0
............TGTCGGCGGATATAGCTCTACTGAG....................................................................................................................................... 25 0 14 0.07 1 0 0 1 0
............................................................................TACCTTGCACCCAGCCTGTCACTGGAG..................................................................... 27 0 14 0.07 1 1 0 0 0
............TGTCGTCGGATATAGCTCTACTGAGTG..................................................................................................................................... 27 1 14 0.07 1 0 0 0 1
...........................................................................CTACCTTGCACCCAGCCTGTCACTGGA...................................................................... 27 0 14 0.07 1 1 0 0 0
.......................................................................................CAGCCTGTCACTGGAGCGTTTCGG............................................................. 24 0 14 0.07 1 1 0 0 0
.........................................................................TGCTACCTTGCACCCAGCCTGTCA........................................................................... 24 0 14 0.07 1 1 0 0 0
...........................................................................CTACCTTGCACCCAGCCTGTCACTGGAGC.................................................................... 29 0 14 0.07 1 1 0 0 0
.......................................................................................................................TAGACAGCATCTCGAACGACGCAA............................. 24 0 14 0.07 1 1 0 0 0
............TGTCGGCGGATATAGCTCTACTGAGTG..................................................................................................................................... 27 0 14 0.07 1 0 0 1 0
.......................................................................................................................TAGACAGCATCTCGAACGACGCA.............................. 23 0 15 0.07 1 1 0 0 0
...........................................................................CTACCTTGCAGCCAGCCTGTCACT......................................................................... 24 1 15 0.07 1 1 0 0 0
.................GCGGATATAGCTCTACTGAGTGAGC.................................................................................................................................. 25 0 15 0.07 1 1 0 0 0
............................................................................TACCTTGCACCCAGCCTGTCACTG........................................................................ 24 0 15 0.07 1 1 0 0 0
............................................................................TACCTTGCACCCAGCCTGTCA........................................................................... 21 0 15 0.07 1 1 0 0 0
.................................................................................TGCACCCAGCCTGTCACTGGAGCGTTT................................................................ 27 0 15 0.07 1 1 0 0 0
...........................................................................CTACCTTGCACCCAGCCTGTC............................................................................ 21 0 15 0.07 1 1 0 0 0
..................................................................................................................................................GACGCCAAGGTCTCATCATCGGTGGG 26 0 15 0.07 1 1 0 0 0
.................GCGGATATAGCTCTACTGAGTGAG................................................................................................................................... 24 0 16 0.06 1 1 0 0 0
.......................................................................................................................................................CAAGGTCTCATCATCGGTG.. 19 0 16 0.06 1 1 0 0 0
.........................................................................TGCTACCTTGCACCCAGCC................................................................................ 19 0 17 0.06 1 1 0 0 0
................................................................................................................................................AGGACGCCAAGGTCTCATCATCGG.... 24 0 17 0.06 1 1 0 0 0
....................................................................................................................................................CGCCAAGGTCTCATCATCGGT... 21 0 17 0.06 1 0 0 1 0
................................................................................................CTTGGAGCGTTTCGGAAG.......................................................... 18 2 18 0.06 1 1 0 0 0

Anti-sense strand reads

GACACGCCCTCAACAGCCGCCTATATCGAGATGACTCACTCGGGATATCTCATCCTCTTTGACCCACATGTCAACGATGGAACGTGGGTCGGACAGTGACCTCGCAAAGCCTTCGTAACATCTGTCGTAGAGCTTGCTGCGTTTTCCTGCGGTTCCAGAGTAGTAGCCACCC
**************************************************.((((.....(((((((((..((....))..)))))))))))))...(((((....)))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
.........................................................................................CGGACAGTGACCTCGCAAAGCCTT........................................................... 24 0 13 5.00 65 55 10 0 0
..........................................................................................GGACAGTGACCTCGCAAAGCCTTCGT........................................................ 26 0 13 4.85 63 50 12 1 0
.........................................................................................CGGACAGTGACCTCGCAAAGCCTTCGT........................................................ 27 0 13 4.77 62 49 12 1 0
...........................................................................................GACAGTGACCTCGCAAAGCCTTCGT........................................................ 25 0 13 4.46 58 38 20 0 0
................................GACTCACTCGGGATATCTCATCCTCTT................................................................................................................. 27 0 3 4.00 12 11 1 0 0
.................................................................................................GACCTCGCAAAGCCTTCGTAACAT................................................... 24 0 4 3.75 15 10 5 0 0
.........................................................................................CGGACAGTGACCTCACAAAGCCTTCGT........................................................ 27 1 13 2.77 36 35 1 0 0
................................GACTCACTCGGGATATCTCATCCTCT.................................................................................................................. 26 0 3 2.67 8 7 1 0 0
..........................................................................................GGACAGTGACCTCACAAAGCCTTCGT........................................................ 26 1 13 2.38 31 21 10 0 0
......................................................................................................CGCAAAGCCTTCGTAACATCTGTCGT............................................ 26 0 4 2.25 9 1 8 0 0
.........................................................................................CGGACAGTGACCTCACAAAGCCTT........................................................... 24 1 13 1.77 23 22 1 0 0
........................................................CTTTGACCCACATGTCAACGATGGAACGT....................................................................................... 29 0 4 1.75 7 7 0 0 0
..............AGCCGCCTATATCGAGATGACTCACT.................................................................................................................................... 26 0 15 1.67 25 15 10 0 0
........................................................................................TCGGACAGTGACCTCGCAAAGCCTT........................................................... 25 0 13 1.62 21 16 4 1 0
..............AGCCGCCTATATCGAGATGACTCAC..................................................................................................................................... 25 0 15 1.40 21 9 12 0 0
................................GACTCACTCGGGATATCTCATCCTCTTT................................................................................................................ 28 0 3 1.33 4 3 1 0 0
.....................................................................................GGGTCGGACAGTGACCTCGCAAAGCCTT........................................................... 28 0 13 1.31 17 6 11 0 0
...................................TCACTCGGGATATCTCATCCTCTT................................................................................................................. 24 0 4 1.25 5 5 0 0 0
............................................................GACCCACATGTCAACGATGGAACGT....................................................................................... 25 0 4 1.25 5 5 0 0 0
............................................................................................ACAGTGACCTCGCAAAGCCTTCGT........................................................ 24 0 13 1.08 14 11 3 0 0
...............................................................................................................................................TTCCTGCGGTTCCAGAGTAGTAGCCA... 26 0 2 1.00 2 0 2 0 0
..........................CGAGATGACTCACTCGGGATATCT.......................................................................................................................... 24 0 5 1.00 5 4 1 0 0
............ACAGCCGCCTATATCGAGATGACTCAC..................................................................................................................................... 27 0 14 0.86 12 6 6 0 0
.......................................................................................GTCGGACAGTGACCTCGCAAAGCCTT........................................................... 26 0 13 0.85 11 8 2 0 1
...............GCCGCCTATATCGAGATGACTCACT.................................................................................................................................... 25 0 16 0.81 13 6 7 0 0
.............................................................ACCCACATGTCAACGATGGAACGT....................................................................................... 24 0 5 0.80 4 3 1 0 0
..........................................................................................GGACAGTGACCTCGCAAAGCCTT........................................................... 23 0 13 0.77 10 9 1 0 0
................................................................................................TGACCTCGCAAAGCCTTCGTAACAT................................................... 25 0 4 0.75 3 1 2 0 0
..........................................................TTGACCCACATGTCAACGATGGAACGT....................................................................................... 27 0 4 0.75 3 3 0 0 0
................................GACTCACTCGGGATATCTCATCCTC................................................................................................................... 25 0 3 0.67 2 2 0 0 0
..........................CGAGATGACTCACTCGGGATATCTCAT....................................................................................................................... 27 0 3 0.67 2 2 0 0 0
.............CAGCCGCCTATATCGAGATGACTCACT.................................................................................................................................... 27 0 14 0.64 9 7 1 0 1
......................................................................................................................................TGCTGCGTTTTCCTGCGGTTCCAGAGT........... 27 0 2 0.50 1 1 0 0 0
..................................................CATCCTCTTTGACCCACATGTCAACGA............................................................................................... 27 0 2 0.50 1 1 0 0 0
.................................................................................................GACCTCGCAAAGCCTTCGTAACATCTGT............................................... 28 0 4 0.50 2 1 1 0 0
..............................................................................................................................................TTTCCTGCGGTTCCAGAGTAGTAGCCA... 27 0 2 0.50 1 1 0 0 0
...........................................................TGACCCACATGTCAACGATGGAACGT....................................................................................... 26 0 4 0.50 2 2 0 0 0
.....GCCCTCAACAGCCGCCTATATCGAGA............................................................................................................................................. 26 0 2 0.50 1 1 0 0 0
........................................CGGGATATCTCATCCTCTTTGACCCAC......................................................................................................... 27 0 2 0.50 1 0 1 0 0
.........................................................TTTGACCCACATGTCAACGATGGAACGT....................................................................................... 28 0 4 0.50 2 1 1 0 0
................................................................................................................................AGGGCTTGCTGCGTTTTCCTGCGGTT.................. 26 1 2 0.50 1 1 0 0 0
......CCCTCAACAGCCGCCTATATCGAGAT............................................................................................................................................ 26 0 2 0.50 1 1 0 0 0
......................................................................................GGTCGGACAGTGACCTCGCAAAGCCT............................................................ 26 0 14 0.50 7 4 3 0 0
.........................................................................................CGGACAGTGACCTCGCAAAGCCTTCG......................................................... 26 0 13 0.46 6 6 0 0 0
.................................................................................................................CGTAACATCTGTCGTAGAGCTTGC................................... 24 0 5 0.40 2 0 2 0 0
...........................GAGATGACTCACTCGGGATATCT.......................................................................................................................... 23 0 5 0.40 2 0 1 0 1
.......................................................................................GTCGGACAGTGACCTCACAAAGCCTT........................................................... 26 1 13 0.38 5 3 0 0 2
......................................................................................GGTCGGACAGTGACCTCGCAAAGCCTT........................................................... 27 0 13 0.38 5 5 0 0 0
...............GCCGCCTATATCGAGATGACTCAC..................................................................................................................................... 24 0 16 0.38 6 4 2 0 0
.....................................................................................GGGTCGGACAGTGACCTCGCAAAGCCT............................................................ 27 0 14 0.36 5 2 3 0 0
.............CAGCCGCCTATATCGAGATGAC......................................................................................................................................... 22 0 14 0.36 5 5 0 0 0
...............................TGACTCACTCGGGATATCTCATCCTCT.................................................................................................................. 27 0 3 0.33 1 0 1 0 0
.............................GATGACTCACTCGGGATATCTCATCC..................................................................................................................... 26 0 3 0.33 1 1 0 0 0
.............................GATGACTCACTCGGGATATCTCATCCT.................................................................................................................... 27 0 3 0.33 1 1 0 0 0
................................GACTCACTCGGGATATCTCATCCTCTC................................................................................................................. 27 1 3 0.33 1 1 0 0 0
..........................CGAGATGACTCACTCGGGATAT............................................................................................................................ 22 0 6 0.33 2 1 1 0 0
.........................TCGAGATGACTCACTCGGGATAT............................................................................................................................ 23 0 6 0.33 2 0 2 0 0
..............................................ATCTCATCCTCTTTGACAGA.......................................................................................................... 20 2 3 0.33 1 1 0 0 0
........................................................................................TCGGACAGTGACCTCACAAAGCCTT........................................................... 25 1 13 0.31 4 4 0 0 0
...........................................................................................GACAGTGACCTCACAAAGCCTTCGT........................................................ 25 1 13 0.31 4 4 0 0 0
..........................................................................................GGACAGTGACCTCGCAAAGCCTTCG......................................................... 25 0 13 0.31 4 4 0 0 0
..........CAACAGCCGCCTATATCGAGATGACTCAC..................................................................................................................................... 29 0 14 0.29 4 4 0 0 0
.............CAGCCGCCTATATCGAGATGACTCAC..................................................................................................................................... 26 0 14 0.29 4 3 1 0 0
.......................................................................................GTCGGACAGTGACCTCGCAAAGCCT............................................................ 25 0 14 0.29 4 3 1 0 0
........................................................................AACGATGGAACGTGGGTCGGACAGT........................................................................... 25 0 7 0.29 2 0 2 0 0
....................................................................TGTCAACGATGGAACGTGGGTCGGAC.............................................................................. 26 0 7 0.29 2 0 2 0 0
........................................................................................TCGGACAGTGACCTCGCAAAGCCT............................................................ 24 0 14 0.29 4 3 1 0 0
.......................................................................CAACGATGGAACGTGGGTCGGACAGT........................................................................... 26 0 7 0.29 2 0 2 0 0
..........................................................................................GGACAGTGACCTCGCAAAGCCT............................................................ 22 0 14 0.29 4 3 1 0 0
.................................................................................................GACCTCGCAAAGCCTTCGTAACA.................................................... 23 0 4 0.25 1 1 0 0 0
.................................ACTCACTCGGGATATCTCATCCTCTTT................................................................................................................ 27 0 4 0.25 1 1 0 0 0
....................................................................................................CTCGCAAAGCCTTCGTAACATCTGT............................................... 25 0 4 0.25 1 1 0 0 0
..................................CTCACTCGGGATATCTCATCCTCTT................................................................................................................. 25 0 4 0.25 1 1 0 0 0
...........................................................TGACCCACATGTCAACGATGGAACG........................................................................................ 25 0 4 0.25 1 0 1 0 0
........................................................CTTTGACCCACATGTCAACGATGGAA.......................................................................................... 26 0 4 0.25 1 0 1 0 0
.................................ACTCACTCGGGATATCTCATCCTCTA................................................................................................................. 26 1 4 0.25 1 1 0 0 0
...............................................................................................GTGACCTCGCAAAGCCTTCGTAACAT................................................... 26 0 4 0.25 1 0 1 0 0
.......................................................................................................GCAAAACCTTCGTAACATCTGTCGT............................................ 25 1 4 0.25 1 1 0 0 0
..............................................................................................AGTGACCTCGCAAAGCCTTCGTAACA.................................................... 26 0 4 0.25 1 1 0 0 0
......................................................................................................CGCAAAGCCTTCGTAACATCTGTCTT............................................ 26 1 4 0.25 1 0 1 0 0
.................................ACTCACTCGGGATATCTCATCCT.................................................................................................................... 23 0 4 0.25 1 1 0 0 0
............................................................GACCCACATGTCATCGATGGAACG........................................................................................ 24 1 4 0.25 1 1 0 0 0
............................................................GACCCACATGTCAACGATGGAACG........................................................................................ 24 0 4 0.25 1 1 0 0 0
..................................................................................................ACCTCGCAAAGCCTTCGTAACAT................................................... 23 0 4 0.25 1 0 1 0 0
............................................................GACCCACATGTCAACGATGGAACGTG...................................................................................... 26 0 4 0.25 1 1 0 0 0
................................AACTCACTCGGGATATCTCATCCTCTT................................................................................................................. 27 1 4 0.25 1 0 1 0 0
.............................................................................................CAGTGACCTCGCAAAGCCTTCGTAACA.................................................... 27 0 4 0.25 1 1 0 0 0
...........................................................TGACCCACATGTCAACGATGGAAC......................................................................................... 24 0 4 0.25 1 1 0 0 0
..................................CTCACTCGGGATATCTCATCCTCTTT................................................................................................................ 26 0 4 0.25 1 1 0 0 0
............................................................................................ACAGTGACCTCGCAAAGCCTTCGTAACA.................................................... 28 0 4 0.25 1 1 0 0 0
...............GCCGCCTATATCGAGATGACT........................................................................................................................................ 21 0 17 0.24 4 2 2 0 0
..........................................................................................GGACAGTGACCTCACAAAGCCTT........................................................... 23 1 13 0.23 3 3 0 0 0
.........................................................................................CGGACAGTGACCTCACAAAGCCTTCG......................................................... 26 1 13 0.23 3 3 0 0 0
...........................................................................................GACAGTGACCTCGCAAAGCCTT........................................................... 22 0 13 0.23 3 1 2 0 0
............ACAGCCGCCTATATCGAGATGACTCACT.................................................................................................................................... 28 0 14 0.21 3 2 1 0 0
.........................................................................................CGGACAGTGACCTCGCAAAGCCT............................................................ 23 0 14 0.21 3 3 0 0 0
...........AACAGCCGCCTATATCGAGATGACTCAC..................................................................................................................................... 28 0 14 0.21 3 2 1 0 0
.............CAGCCGCCTATATCGAGAT............................................................................................................................................ 19 0 15 0.20 3 3 0 0 0
........................................CGGGATATCTCATCCTCTTT................................................................................................................ 20 0 5 0.20 1 1 0 0 0
.................................................................................................................CGTAACATCTGTCGTAGAGCT...................................... 21 0 5 0.20 1 1 0 0 0
...............................................................CCACATGTCAACGATGGAACGTGGG.................................................................................... 25 0 5 0.20 1 1 0 0 0
.............................................................ACCCACATGTCAACGATGGAACG........................................................................................ 23 0 5 0.20 1 1 0 0 0
........................ATCGAGATGACTCACTCGGGATATCT.......................................................................................................................... 26 0 5 0.20 1 0 1 0 0
................................................................CACATGTCAACGATGGAACGTGGGT................................................................................... 25 0 5 0.20 1 0 1 0 0
..............................................................................................................CTTCGTAACATCTGTCGTAGAGCTTGC................................... 27 0 5 0.20 1 0 0 1 0
................................GACTCACTCGGGATATCTC......................................................................................................................... 19 0 5 0.20 1 1 0 0 0
................................................................................................................................................TCCTGCGGTTCCAGAGTAGTAGCCA... 25 0 17 0.18 3 0 3 0 0
...................................................................................................................AAACATCTGTCGTAGAGCTT..................................... 20 1 6 0.17 1 1 0 0 0
..........................CGAGATGACTCACTCGGGATA............................................................................................................................. 21 0 6 0.17 1 1 0 0 0
.................................................................ACATGTCAACGATGGAACGTGGGT................................................................................... 24 0 6 0.17 1 1 0 0 0
..........................CGAGATGACTCACTCGGGATATC........................................................................................................................... 23 0 6 0.17 1 1 0 0 0
...........................GAGATGACTCACTCGGGATAT............................................................................................................................ 21 0 6 0.17 1 0 1 0 0
.........................TCGAGATGACTCACTCGGGATA............................................................................................................................. 22 0 6 0.17 1 1 0 0 0
......................ATATCGAGATGACTCACTCGGGATAT............................................................................................................................ 26 0 6 0.17 1 1 0 0 0
...............................................................................................................................TCAAGCTTGCTGCGATTTCCT........................ 21 3 6 0.17 1 0 0 1 0
........................................................................................TCGGACAGTGACCTCGCAAAGCCTTCGT........................................................ 28 0 13 0.15 2 2 0 0 0
............................................................................................ACAGTGACCTCACAAAGCCTTCGT........................................................ 24 1 13 0.15 2 2 0 0 0
.....................................................................................GGGTCGGACAGTGACCTCACAAAGCCTT........................................................... 28 1 13 0.15 2 2 0 0 0
...........................................................................................GACAGTGACCTCACAAAGCCTT........................................................... 22 1 13 0.15 2 2 0 0 0
..................GCCTATATCGAGATGACTCACTCGGGAT.............................................................................................................................. 28 0 13 0.15 2 1 0 0 1
.............................................................................................CAGTGACCTCGCAAAGCCTTCGT........................................................ 23 0 13 0.15 2 1 1 0 0
...................................................................ATGTCAACGATGGAACGTGGGTCGGAC.............................................................................. 27 0 7 0.14 1 0 1 0 0
..............................................................................GGAACGTGGGTCGGACAGTGACCT...................................................................... 24 0 14 0.14 2 1 1 0 0
........CTCAACAGCCGCCTATATCGAGATGAC......................................................................................................................................... 27 0 14 0.14 2 2 0 0 0
.......................................................................CAACGATGGAACTTGGGTCGGACAGT........................................................................... 26 1 7 0.14 1 0 1 0 0
.........TCAACAGCCGCCTATATCGAGATGAC......................................................................................................................................... 26 0 14 0.14 2 2 0 0 0
..........CAACAGCCGCCTATATCGAGATGAC......................................................................................................................................... 25 0 14 0.14 2 2 0 0 0
......................................................................ATAACGATGGAACGTGGGTCGGACAGT........................................................................... 27 2 7 0.14 1 0 1 0 0
.....................................................................GTCAACGATGGAACGTGGGTCGGAC.............................................................................. 25 0 7 0.14 1 0 1 0 0
.....................................................................................GGGTCGGACAGTGACCTCGCAAAGCC............................................................. 26 0 14 0.14 2 1 1 0 0
.........................................................................................CGGACAGTGACCTCGCAAAGC.............................................................. 21 0 14 0.14 2 2 0 0 0
..........................................................................CGATGGAACGTGGGTCGGACAGT........................................................................... 23 0 14 0.14 2 0 2 0 0
.........TCAACAGCCGCCTATATCGAGATGACT........................................................................................................................................ 27 0 14 0.14 2 2 0 0 0
..............AGCCGCCTATATCGAGATGAC......................................................................................................................................... 21 0 15 0.13 2 1 1 0 0
........CTCAACAGCCGCCTATATCGAGAT............................................................................................................................................ 24 0 15 0.13 2 2 0 0 0
..............AGCCGCCTATATCGAGATGACT........................................................................................................................................ 22 0 15 0.13 2 0 2 0 0
.........................................................................ACGATGGAACGTGGGTCGGAC.............................................................................. 21 0 16 0.13 2 2 0 0 0
.................CGCCTATATCGAGATGACTCACT.................................................................................................................................... 23 0 16 0.13 2 2 0 0 0
................CCGCCTATATCGAGATGACTCACT.................................................................................................................................... 24 0 16 0.13 2 2 0 0 0
...................................................................................................................................................TGCGGTTCCAGAGTAGTAGCCAC.. 23 0 16 0.13 2 0 2 0 0
...................................................................................................................................................TGCGGTTCCAGAGTAGTAGCCA... 22 0 17 0.12 2 0 2 0 0
.............................................................................................CAGTGACCTCGCAAAGCCTTCGTAA...................................................... 25 0 12 0.08 1 1 0 0 0
........................................................................................TCGGACAGTGACCTCACAAAGCCTTCGT........................................................ 28 1 13 0.08 1 1 0 0 0
.....................................................................................GGGTCGGACAGTGACCTCTCAAAGCCTT........................................................... 28 1 13 0.08 1 0 1 0 0
..........................................................................................GGACAGTGACCTCAGAAAGCCTTCGT........................................................ 26 2 13 0.08 1 1 0 0 0
..........................CGAGATGACTCACTCGGGA............................................................................................................................... 19 0 13 0.08 1 1 0 0 0
........................................................................................ACGGACAGTGACCCCACAAAGCCTT........................................................... 25 3 13 0.08 1 1 0 0 0
..........................................................................................GGACAGTGACCTCGCAAAGCCTTCGTC....................................................... 27 1 13 0.08 1 1 0 0 0
.................CGCCTATATCGAGATGACTCACTCGGGAT.............................................................................................................................. 29 0 13 0.08 1 1 0 0 0
.........................................................................................CGGACAGTGACCTCGCAAAGCCTTCTG........................................................ 27 2 13 0.08 1 1 0 0 0
............................................................................................ACAGTGACCTCACAAAGCCTTC.......................................................... 22 1 13 0.08 1 1 0 0 0
.........................................................................................TGGACAGTGACCTCGCAAAGCCTTCGT........................................................ 27 1 13 0.08 1 1 0 0 0
.....................................................................................GGGTCGGACAGTGACCTCGAAAAGCCTT........................................................... 28 1 13 0.08 1 0 1 0 0
..........................................................................................GGACATTGACCTCGCAAAGCCTTCGT........................................................ 26 1 13 0.08 1 0 1 0 0
.........................................................................................CGGACAGTGACCTCGCAAAGCCTTCGG........................................................ 27 1 13 0.08 1 1 0 0 0
...........................................................................................GACAGTGACCTCGCAAAGCCTTCG......................................................... 24 0 13 0.08 1 1 0 0 0
.....................................................................................CGGTCGGACAGTGACCTCGCAAAGCCTT........................................................... 28 1 13 0.08 1 0 1 0 0
.............................................................................................CAGTGACCTCACAAAGCCTTCGT........................................................ 23 1 13 0.08 1 0 1 0 0
.......................................................................................TTCGGACAGTGACCTCGCAAAGCCTT........................................................... 26 1 13 0.08 1 1 0 0 0
.........................................................................................CCGACAGTGACCTCGCAAAGCCTTCGTC....................................................... 28 2 13 0.08 1 0 1 0 0
..........................................................................................GGATAGTGACCTCGCAAAGCCTTCGT........................................................ 26 1 13 0.08 1 0 1 0 0
.........................................................................................CGGACAGTGACCTCGCAAAGCCTTC.......................................................... 25 0 13 0.08 1 1 0 0 0
.........................................................................................CGGACAGTGACCTCGAAAAGCCTTCGT........................................................ 27 1 13 0.08 1 1 0 0 0
...........................................................................................GACAGTGACCTCGCAAAGCCATCG......................................................... 24 1 13 0.08 1 1 0 0 0
...........................................................................................GACAGTGACCTCGCAGAGCCTTCGT........................................................ 25 1 13 0.08 1 0 1 0 0
..........................................................................................GGACAGTGACCTCGCAAAGCCTTC.......................................................... 24 0 13 0.08 1 0 1 0 0
............................................................................................ACAGTGACCTCGCAAAGCCTT........................................................... 21 0 13 0.08 1 1 0 0 0
...........................................................................................GACAGTGATCTCGCAAAGCCTTCGT........................................................ 25 1 13 0.08 1 0 1 0 0
............................................................................................ACAGTGACCTCGCAAAGCCTTCT......................................................... 23 1 13 0.08 1 1 0 0 0
........................................................................................ACGGACAGTGACCTCGCAAAGCCTT........................................................... 25 1 13 0.08 1 1 0 0 0
.........................................................................................CGGACAGTGACCTCACAAAGCCTTCGTA....................................................... 28 1 13 0.08 1 1 0 0 0
..........................................................................................GGACAGAGACCTCACAAAGCCTTCGT........................................................ 26 2 13 0.08 1 1 0 0 0
...........................................................................................GACAGTGACCTCGCAAAGCCTTCGTA....................................................... 26 0 13 0.08 1 0 1 0 0
..........................................................................................GGACAGTGACCTCACAAAGCCTTC.......................................................... 24 1 13 0.08 1 1 0 0 0
.............................................................................TGGAACGTGGGTCGGACAGTGACCT...................................................................... 25 0 14 0.07 1 0 1 0 0
.........................................................................................CGGACGGTGACCTCGCAAAGCCTTCGT........................................................ 27 1 14 0.07 1 1 0 0 0
..........................................................TTGACCCACATATCAACAATG............................................................................................. 21 2 14 0.07 1 1 0 0 0
...........AACAGCCGCCTATATCGAGATGACT........................................................................................................................................ 25 0 14 0.07 1 1 0 0 0
.........................................................................................CGGACAGTGACCTCGCAAAGCC............................................................. 22 0 14 0.07 1 1 0 0 0
......................................................................CTTACGATGGAACGTGGGTCGGACAGT........................................................................... 27 3 14 0.07 1 0 1 0 0
.........TCAACAGCCGCCTATATCGGGATGACT........................................................................................................................................ 27 1 14 0.07 1 1 0 0 0
..............................................................................GGACCGTGGGTCGGAGAGTGACCTCT.................................................................... 26 3 14 0.07 1 1 0 0 0
............................................................................TTGGAACGTGGGTCGGACAGTGACCT...................................................................... 26 1 14 0.07 1 0 1 0 0
.......................................................................GTACGATGGAACGTGGGTCGGACAGT........................................................................... 26 2 14 0.07 1 0 1 0 0
............TCAGCCGCCTATATCGAGATGACT........................................................................................................................................ 24 1 14 0.07 1 1 0 0 0
.........GCAACAGCCGCCTATATCGAGATGAC......................................................................................................................................... 26 1 14 0.07 1 1 0 0 0
............ACAGCCGCCTATATCGAGATGAC......................................................................................................................................... 23 0 14 0.07 1 1 0 0 0
.....................................................................................GGGTCGGACAGTGACCTCACAAAGCCT............................................................ 27 1 14 0.07 1 1 0 0 0
.....................................................................GTCTACCATGGAACGTGGGTCGGA............................................................................... 24 2 14 0.07 1 0 1 0 0
...........AACAGCCGCCTATATCGAGATGAC......................................................................................................................................... 24 0 14 0.07 1 1 0 0 0
......................................................................TATACGATGGAACGTGGGTCGGACAGT........................................................................... 27 2 14 0.07 1 1 0 0 0
.............CATCCGCCTATATCGAGATGACTCACT.................................................................................................................................... 27 1 14 0.07 1 1 0 0 0
...........AACAGCCGCCTATATCGAGATGACTCACT.................................................................................................................................... 29 0 14 0.07 1 1 0 0 0
.......................................................................................GTCGGACAGTGACCTCGCAAAGCC............................................................. 24 0 14 0.07 1 1 0 0 0
.........TCAACAGCCGCCTATATCGAGATGGC......................................................................................................................................... 26 1 14 0.07 1 0 1 0 0
...........................................................................................GACAGTGACCTCGCAAAAACTTCGT........................................................ 25 2 14 0.07 1 1 0 0 0
.......................................................................TTACGATGGAACGTGGGTCGGACAGT........................................................................... 26 2 14 0.07 1 0 1 0 0
.............CAGCCGCCTATATCGAGATGACTCA...................................................................................................................................... 25 0 14 0.07 1 1 0 0 0
.........................................................................................CGGACAGTGACCTCGCAAA................................................................ 19 0 15 0.07 1 1 0 0 0
...........................................................................GATGGAACGTGGGTCGGACAGTGAC........................................................................ 25 0 15 0.07 1 0 1 0 0
..............AGCCGCCTATATCGAGATGACTCA...................................................................................................................................... 24 0 15 0.07 1 1 0 0 0
.........TCAACAGCCGCCTATATCGAGAT............................................................................................................................................ 23 0 15 0.07 1 0 1 0 0
.........TCAACAGCCGCCTATATCGAGATGAA......................................................................................................................................... 26 1 15 0.07 1 0 1 0 0
..............................................................................GGAACGTGGGTCGGACAGT........................................................................... 19 0 15 0.07 1 0 1 0 0
.........TCAACAGCCGCCTATATCGAGA............................................................................................................................................. 22 0 15 0.07 1 1 0 0 0
.........TCAACAGCCGCCTATATCGAGATGA.......................................................................................................................................... 25 0 15 0.07 1 1 0 0 0
.........................................................................................CGGACAGTGACCTCACAAA................................................................ 19 1 15 0.07 1 1 0 0 0
.......................................................................................GTCGGACAGTGACCTCACAA................................................................. 20 1 15 0.07 1 1 0 0 0
...................................................................................................................................................TGCGGTTCCAGAGTAGTAGCCACCC 25 0 15 0.07 1 1 0 0 0
........CTCAACAGCCGCCTATATCGAG.............................................................................................................................................. 22 0 15 0.07 1 1 0 0 0
.................................................................................................................................................CCTGCGGTTCCAGAGTAGTAGCCACCC 27 0 15 0.07 1 0 1 0 0
...............GCCGCCTATATCGAGATGACTCACTCGG................................................................................................................................. 28 0 15 0.07 1 1 0 0 0
.........................................................................................CGGACAGTGACGTCGCAAAGCCT............................................................ 23 1 15 0.07 1 1 0 0 0
.............................................................................TGGAACGTGGGTCGGACAGT........................................................................... 20 0 15 0.07 1 1 0 0 0
.......TTTCAACAGCCGCCTATATCGAGATGA.......................................................................................................................................... 27 2 15 0.07 1 1 0 0 0
.............CAGCCGCCTATATCGAGATGA.......................................................................................................................................... 21 0 15 0.07 1 1 0 0 0
.........................................................................................CGGACAGTGACCTCGCAA................................................................. 18 0 15 0.07 1 1 0 0 0
.................................................................................................................................................CCTGCGGTTCCATAGTAGTAGCCAC.. 25 1 16 0.06 1 0 1 0 0
.................................................................................................................................................CCTGCGGTTCCAGAGTAGTAGCCAC.. 25 0 16 0.06 1 0 1 0 0
..........................................................................CGATGGAACGTGGGTCGGAC.............................................................................. 20 0 16 0.06 1 0 1 0 0
.................................................................................................................................................CCTGCGGTTCCAGAGTAGTAGCCACC. 26 0 16 0.06 1 0 1 0 0
.........................................................................................AGGACAGTGACCTCACAA................................................................. 18 2 16 0.06 1 0 1 0 0
................................................................................................................................................TCCTGTGGTTCCAGAGTAGTAGCCA... 25 1 17 0.06 1 0 1 0 0
.....................................................................................................................................................CGGTTCCAGAGTTGTAGC..... 18 1 17 0.06 1 0 1 0 0
.................................................................................................................................................CCTGCGGTTCCAGAGTAGTAGC..... 22 0 17 0.06 1 1 0 0 0
.................................................................................................................................................CCTGCGGTTCCAGAGTAGTAGCCA... 24 0 17 0.06 1 1 0 0 0
....................................................................................................................................................GCGGTTCCAGAGTAGTAGCCA... 21 0 17 0.06 1 1 0 0 0
...................................................................................................CCTCGAAAAACCTTCGTA....................................................... 18 2 18 0.06 1 1 0 0 0
.................................................................................ACGTGGGTCGAACAGTTA......................................................................... 18 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004954:384356-384527 - dwi_3683 CTGTGCGGGAGTTGTCGGCGGATATAGCTCTACTGAGTGAGCCCTATAGAGTA-------------------------------------------------------------------------------------------------------------------------------GGAGAAACTGGGTGTACAGTTGCTACCTTGCACCCAGCCTGTCACTGGAGCGTTTCGGAAGCATTGTAGACAGCATCTCGAACGACGCAAAAGGACGCCAAGGTCTCATCATCGGTGGG-
droVir3 scaffold_13052:226035-226249 + CTGTTAGAGAAATGCGCATCGATATTGCCATTATCAGCGAACCCTTCGACGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGTTTGTACGCGCACGATATGGCAGCCTATGGATACACAGCTGCTATCTAGCC-CGAGCATGCAGCTTAGCGAGTTTCAAGCTGCATTAGACGCATTTATAGACGACGCAAGGGGGCG---GAAGGTCATGATTGCTGGT-
droMoj3 scaffold_6679:1592-1752 - CCATTAGGGAATTATGTATAGATGTAGCTTTTCTCAGTGAGCCTCACCACTGTAGAACCAGCTGCCCTAGGACATGGTCAACAGACGTTAATGGCAAAGCTGCGTTGTGGGTATGCGGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTACTTTCGAATGTT-------------AAGTCA--TTCAATGGG-
dp5 Unknown_group_677:16398-16569 + CCCTGCA--AACTCAGCAATGTGCT---------------------------------------------------------------------------------------------------------------------------GGCAGGAGACGGATTAGTGCGCGCGAGAGCTGGCAACCTATGGGTATACAGCTGCTACCTAGCGCCCAGTCTACCCCTCGAGTCCTTCGCCCGAATCATTGAGGAACTAGCTGAAGGCGCAAGAAACCGCGGGGCAGTCCTAATCGCTG---
droPer2 scaffold_117:51673-51835 - CTCAGCA--ATGTGCT------------------------------------------------------------------------------------------------------------------------------------GGCAGGAGACGGATTAGTGCGCGCGAGAGCTGGCAACCTATGGGTATACAGCTGCTACCTAGCGCCCAGTCTACCCCTCGAGTCCTTCGCCCGAATCATTGAGGAACTAGCTGAAGGCGCAAGAAACCGCGGGGCAGTCCTAATCGCTG---
droAna3 scaffold_13165:352271-352478 - CGGTGGTCGAAGCGAGGGCAGACGTGGCCATCCTTAGCGAGCCCTACAGCGTCGGAGTGGGAGA------GGAGTGGGTGACGGATACGTCTGGAAAGGCGGGAATCTGG-------------------------------------------------------------------------------------CTATCTGTTACATAGCACCCAGCTTGTCCCTCGATGCTTTCTGTAAGGTCTTGGAAGACTTAGTGATCGACGCCAGAGGCAAGCACCCAGTGCTCATAGCAGGG-
droBip1 scf7180000395975:7438-7625 + CCGTAGGCGAGGTGAATGCTGACATAGCAATACTCATTGAGCCGTACAGCGTCGGGCCAGGCGA------GGAGTGGGCGACCAAC---------------------------------------------------------------------------------------------------------AATCAGGGCTGCTACCTAGCCCCAAGCCTCTCACTCGATGCTTACTGCAAGGCTCTAGAGGAGCTTGCGGTAGATGCCAGAGGCAAACACGCAGTGCTAATAGCAGGT-
droKik1 scf7180000298216:8549-8724 + ATGCGCCGGAGCTGCGCGACACCAA---------------------------------------------------------------------------------------------------------------------------AGCAGCGGAAGGATTCGTCCGAGCGAACATTGGCGGCATCTGGCTGTACAGCTGCTACTTGGCACCCAGTCTCTCACTGGAGGCGTTCGGCAGGATTCTGGACGAGCTGAGCAGCGATCTGCGTGGACGGAGCAACGTTGTGGTTGGCGGC-
droFic1 scf7180000454116:86445-86575 - GAGCCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGGAACACCTATATATATAGTTGCTACATACCCCCGAGAATCCCGTTGCCAGACTTCCAAATAATAATCGAGGAAATAGCTCAAGATGCAAATGAGAAATCTTCCGTCATCATCGCTGGA-
droEle1 scf7180000491313:12261-12460 - CTGTGCGGGAAATCCAAGCCGATGTGGCGATAATCAGCGAGCCGTACAAAAAGACTTCCGGGTC------GGACTTCGTACTGGATACTACTAAGTCTGCGGCGATCTTG------------------------------ACG--------------------------ATTGGGTCA-------------------------------------TTTTCGAGCAACGGTGAACGAGGTTTTAATCTGGACGAACTGATGGACGACGCAAGGGGAAGGCGGAACGTTATCATCGCTGGC-
droRho1 scf7180000761589:5407-5517 - TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTTTAGCTGCTACTTTCCACCCAGCTGGACACTAGAGGAGTTTAGCGAGACGATAGACAGCCTGGCAAACGACATAAGAGCACACTCCCCTGCGATTATTGCTGGG-
droBia1 scf7180000299321:10340-10605 - CGGTGCGCGAACTGGGTGCTGAGGTGGCGATACTCAATGAGCCCTACAGAGTTAAAAGCAGTGA------CGATTGGGCTAC-GATCGCACAGGCAAAACGGCACTGTGGCTCTGCGAAGTGGCTGCACCACCCATGCGGGACACAAGGGCAGCAGAGGGGTTCGGAC--------GTAGGCGGCACATGGCTCTACAGCTGCTACCTGATGA------------------TCTTAAGCAGGATCCTGGACGAGCTGAGCAGTGACCTGAGAGGACAAAGCAACGTAGTGATCGGAGGC-
droTak1 scf7180000415423:1146-1331 - CCGTGCGCGAAGTAGGAACAGAGGTGGCGATTCTAAGCGAGCCTTACAGGACAGGAACCAGCAG------AGAGTGGATCGCAGACCGCACAGGCAAAGCTGCTATCTGGTTGTGCGGCTTGGAAGCAACCAGACTCAGCGAAGTCTGGGCTGCAAAAGGCTTCGTGC--------G-------------------------------------------------------------------------TGGGCTGATAGACG--------------------------GGGTCTGGG-
droEug1 scf7180000407817:6525-6636 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTGTACAGCTGCTACCTAGCCCCAAGCCTCTCACTCGATGCTTACTGCAAGGCTCTAGAGGAGCTTGCGGTCGATGCCAGAGGCAAGCACCCAGTGCTAATAGCAGGTG
dm3 chr2RHet:701480-701692 + CGGTGCGTGAACGCAGAGTGGAGCTTGCGTTACTTAGCAAGCCCTACCGGACGGCTTTC------------------------GACCGCGCCAAGAAAGCAGCGATCTGGAGGTGCAGCAGCGAAGCCTTACAATTAAGCAATAATTTTTCGGACAACTG------------GTTTGTTAGGGA--------------------------------------------------AAGGTGGGCAGATGGTGTGTGTGGAGCACCATGCTAGAGGCCGCACCTAGGTACTCATAGCTGGC-
droSim2 2l:22097892-22098017 - AGGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTGTACAGCGTATACCTAGCTCCCAGCCTGACCTTAATCGCATTCAGTCGGGCATTGGATAGACTGGCAGCGGATGCTTGAGGCCGCACCCAGGTTCTCATAGCTGGC-
droSec2 scaffold_1348:33-181 + CGGTGCGTGAACGCAGAGTGGAGCTTGCGCTACTTATCGAGCCCTACCGTACGGCGGCTGGCCC------AGACTGGGCTTTCGACCG------------------------------------------------------------------------------------------------------------------------------------------------CATCAATAAAGCACTGGACAGACTGGCAGCGGATGTTAGAGGCCGCACCCAGGTTCTCATAGCGGGC-
droYak3 v2_chrUn_554:77696-77932 - CCATGCGCGAAGTCCAAGCTGACGTAGCGCTAATAAGCGAGCCGTATAAGAAAACCCCCGGGGC------AGACTACATACTGGACGGTACAAGAAGAGCCCCAATCCTG------------------------------ATC--------------------------AACGGGACAAGGCGACCTGTGCCTGTACAGCTGCTATCTACCACCACGCCATTCCCTTCAGGAATTTTCGGCAGTTATAGACGAGCTGGGTAACGACGCAAGAGGCGAGCGGAACGTGGTCATCGCTGGT-
droEre2 scaffold_4770:210067-210203 + GCGGGCTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGGTTAGAGGTGGGTGGGTGTACAGCGTATACCTAGCCCTCAGTCTGAACAAAAGCGAATTCAGCCAGGCAGTAGACAGTCTGCCGTCGGATGCTAGAGATCGCACCCCGGTCCTTATTGCTGGC-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CTGTGCGGGAGTTGTCGGCGGATATAGCTCTACTGAGTGAGCCCTATAGAGTA-------------------------------------------------------------------------------------------------------------------------------GGAGAAACTGGGTGTACAGTTGCTACCTTGCACCCAGCCTGTCACTGGAGCGTTTCGGAAGCATTGTAGACAGCATCTCGAACGACGCAAAAGGACGCCAAGGTCTCATCATCGGTGGG-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................CGTTTCGGAAGCATTGTAGACAGC..............................................2442.25936000
.........................................................................................................................................................................................................................................TTCGGAAGCATTGTAGACAGCATC...........................................2442.00826000
.........................................................................................................................................................................................................................................TTCGGAAGCATTGTAGACAGCATCT..........................................2541.75707000
......................................................................................................................................................................................................................................CGTTTCGGAAGCATTGTAGACAGCA.............................................2541.00404000
......................................................................................................................................................................................................................................CGTTTCGGAAGCATTGTAGACAG...............................................2340.75303000
.........................................................................................................................................................................................................................................TTCGGAAGCATTGTAGACAGCATCTCGA.......................................2840.50202000
.................................................AGTA-------------------------------------------------------------------------------------------------------------------------------GGAGAAACTGGGTGTACAGT....................................................................................................2420.50101000
......................................................................................................................................................................................................................................CGTTTCGGAAGCATTGTAGACAGCATCT..........................................2840.50202000
..............................................................................................................................................................................................................................................AAGCATTGTAGACAGCATCTCGAACGA...................................2750.40202000
.....................................................................................................................................................................................................................................................GTAGACAGCATCTCGAACGACG.................................2250.40202000
................GGCGGATATAGCTCTACTGAGTGA....................................................................................................................................................................................................................................................................24160.38606000
..............................TACTGAGTGAGCCCTATAGAGTA-------------------------------------------------------------------------------------------------------------------------------GGA.....................................................................................................................2630.33100010
..............................TACTGAGTGAGCCCTATAGAGTA-------------------------------------------------------------------------------------------------------------------------------GG......................................................................................................................2530.33101000
................GGCGGATATAGCTCTACTGAGTGAGC..................................................................................................................................................................................................................................................................26150.27404000
..........................................................................................................................................................................................................CTACCTTGCACCCAGCCTGTCACTG.........................................................................25150.27404000
.....................................................................................................................................................................................................................................GCGTTTCGGAAGCATTGTAGACAGC..............................................2540.25101000
..........................GCTCTACTGAGTGAGCCCTATAGAGT........................................................................................................................................................................................................................................................2640.25101000
........................................................................................................................................................................................................................................TTTCGGAAGCATTGTAGACAG...............................................2140.25101000
.........................................................................................................................................................................................................................................TTCGGAAGCATTGTAGACAGCAT............................................2340.25101000
...........................................................................................................................................................................................................................TGTCACTGGAGCGTTTCGGAAGCATTG......................................................2740.25101000
.........................................................................................................................................................................................................................................TTCGGAAGCATTGTAGACAGCATCTCG........................................2740.25101000
........................................................................................................................................................................................................................................TTTCGGAAGCATTGTAGACAGCATCT..........................................2640.25101000
..........................................................................................................................................................................................................................CTGTCACTGGAGCGTTTCGGAAGCATTG......................................................2840.25101000
..........................................................................................................................................................................................................................................TCGGAAGCATTGTAGACAGCATCT..........................................2440.25101000
.........................................................................................................................................................................................................................................TTCGGAAGCATTGTAGACAGCA.............................................2240.25110000
.......................................................................................................................................................................................................................................GTTTCGGAAGCATTGTAGACAGC..............................................2340.25101000
................GGCGGATATAGCTCTACTGAGTGAGCCC................................................................................................................................................................................................................................................................28130.23303000
..........................................................................................................................................................................................................CTACCTTGCACCCAGCCTGTCACT..........................................................................24150.20302010
..............................................................................................................................................................................................................................................AAGCATTGTAGACAGCATCTCGAAC.....................................2550.20101000
..............................................................................................................................................................................................................................................AAGCATTGTAGACAGCATCTCGA.......................................2350.20100010
................GGCGGATATAGCTCTACTGAGTGAGCC.................................................................................................................................................................................................................................................................27150.20303000
............................................................................................................................................................................................TGGGTGTACAGTTGCTACCTTGCA........................................................................................2450.20101000
............................................................................................................................................................................................TGGGTGTACAGTTGCTACCTTGCAC.......................................................................................2550.20101000
.............................................................................................................................................................................................................................................GAAGCATTGTAGACAGCATCTCGA.......................................2450.20101000
.....................................................................................................................................................................................................................................................GTAGACAGCATCTCGAACGACGC................................2350.20101000
................GGCGGATATAGCTCTACTGAGTG.....................................................................................................................................................................................................................................................................23160.19303000
......................................................................................................................................................................................................................................................................................CAAGGTCTCATCATCGGTGG..20160.19303000
................GGCGGATATAGCTCTACTGAGTGAG...................................................................................................................................................................................................................................................................25160.19303000
.................GCGGATATAGCTCTACTGAGTGAGCCC................................................................................................................................................................................................................................................................27130.15202000
..................................................................................................................................................................................................TACAGTTGCTACCTTGCACCCAGCCTG...............................................................................2770.14101000
..........................................................................................................................................................................................................CTACCTTGCACCCAGCCTGTCACTGGAG......................................................................28140.14202000
..........................................................................................................................................................................................................CTACCTTGCACCCAGCCTGTCAC...........................................................................23150.13202000
..........................................................................................................................................................................................................CTACCTTGCACCCAGCCTGTCA............................................................................22150.13202000
.....................................................................................................................................................................................................................CCAGCCTGTCACTGGAGCGT...................................................................20150.13202000
...................................................................................................................................................................................................................................................................................CGCCAAGGTCTCATCATCGGTGGG-24150.13200020
.................GCGGATATAGCTCTACTGAGTG.....................................................................................................................................................................................................................................................................22160.13202000
...................................................................................................................................................................................................................................................................................CGCCAAGGTCTCATCATCGGTGG..23160.13202000
......................................................................................................................................................................................................................CAGCCTGTCACTGGAGCGTTTCGGAAG...........................................................27130.08101000
......................TATAGCTCTACTGAGTGAGCCCT...............................................................................................................................................................................................................................................................23130.08100010
...........................................................................................................................................................................................................TACCTTGCACCCAGCCTGTCACTGG........................................................................25140.07101000
........................................................................................................................................................................................................TGCTACCTTGCACCCAGCCTGTCACT..........................................................................26140.07101000
......................................................................................................................................................................................................................CAGCCTGTCACTGGAGCGTTTCGGA.............................................................25140.07101000
............TGTCGGCGGATATAGCTCTACTGAG.......................................................................................................................................................................................................................................................................25140.07100010
...........................................................................................................................................................................................................TACCTTGCACCCAGCCTGTCACTGGAG......................................................................27140.07101000
..........................................................................................................................................................................................................CTACCTTGCACCCAGCCTGTCACTGGA.......................................................................27140.07101000
......................................................................................................................................................................................................................CAGCCTGTCACTGGAGCGTTTCGG..............................................................24140.07101000
........................................................................................................................................................................................................TGCTACCTTGCACCCAGCCTGTCA............................................................................24140.07101000
..........................................................................................................................................................................................................CTACCTTGCACCCAGCCTGTCACTGGAGC.....................................................................29140.07101000
......................................................................................................................................................................................................................................................TAGACAGCATCTCGAACGACGCAA..............................24140.07101000
............TGTCGGCGGATATAGCTCTACTGAGTG.....................................................................................................................................................................................................................................................................27140.07100010
......................................................................................................................................................................................................................................................TAGACAGCATCTCGAACGACGCA...............................23150.07101000
.................GCGGATATAGCTCTACTGAGTGAGC..................................................................................................................................................................................................................................................................25150.07101000
...........................................................................................................................................................................................................TACCTTGCACCCAGCCTGTCACTG.........................................................................24150.07101000
...........................................................................................................................................................................................................TACCTTGCACCCAGCCTGTCA............................................................................21150.07101000
................................................................................................................................................................................................................TGCACCCAGCCTGTCACTGGAGCGTTT.................................................................27150.07101000
..........................................................................................................................................................................................................CTACCTTGCACCCAGCCTGTC.............................................................................21150.07101000
.................................................................................................................................................................................................................................................................................GACGCCAAGGTCTCATCATCGGTGGG-26150.07101000
.................GCGGATATAGCTCTACTGAGTGAG...................................................................................................................................................................................................................................................................24160.06101000
......................................................................................................................................................................................................................................................................................CAAGGTCTCATCATCGGTG...19160.06101000
........................................................................................................................................................................................................TGCTACCTTGCACCCAGCC.................................................................................19170.06101000
...............................................................................................................................................................................................................................................................................AGGACGCCAAGGTCTCATCATCGG.....24170.06101000
...................................................................................................................................................................................................................................................................................CGCCAAGGTCTCATCATCGGT....21170.06100010
droVir3
CTGTTAGAGAAATGCGCATCGATATTGCCATTATCAGCGAACCCTTCGACGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGTTTGTACGCGCACGATATGGCAGCCTATGGATACACAGCTGCTATCTAGCC-CGAGCATGCAGCTTAGCGAGTTTCAAGCTGCATTAGACGCATTTATAGACGACGCAAGGGGGCG---GAAGGTCATGATTGCTGGT-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACT..............................................................................................................................................262017.153436066201000000000000002004039624222112614203300201001003000100000210000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGC...............................................242016.9533900296048100000000000000005456057002000482831010000001000000001000101001
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCAT.............................................262012.6525300001001200000000000000010300626500031700021245000000000000000000010002
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACG................................................232012.25245103300020000000000000200112433503800006005171210100000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCA................................................................................................................................................24209.9519900212122200000000000001000022390540112322312000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCATT............................................27209.6019200000220100021000000000219244257010213000095005201000000000000000002
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTC.................................................................................................................................................23206.951391019080100000200000001001401317112002000159129100000100000000000001000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTG.............................................................................................................................................27206.4512900190201000000000000000033030190103120210861000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCAC...............................................................................................................................................25206.051215046011000000200000000002130019020120461005100000000100000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATCTAGCC-C......................................................................................2935.0015001000000000000000000000032000000042111000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTA...............................................................................................21204.408800207000000210000000200234670001311890127100000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGG............................................................................................................................................28204.008000450101000000000000000003013210000071600000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGTT.........................................................................................................................................31203.657300000000000000000000000000000000000000009335011318255011001420000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATCT............................................................................................2432.678000000100000000000000000200000000001202000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATCTAGC.........................................................................................2732.678001100000000000000000000002000000021100000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGC.................................................................................................19202.50500041406100401000000010041130210000040210000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCT................................................................................................20202.45490021100050240200000000051110000010520313000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTT..................................................................................................................................................22202.3547106000000000200000000009436021015000520000000000000000000000000
..GTTAGAGAAATGCGCATCGATATTG.................................................................................................................................................................................................................................................................................25202.35470000005000000000000000020092000114008060000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATCTAG..........................................................................................2632.337005000000000000000000000000000000020000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCA..............................................25202.25450080001000010000000000030110000000092322000001000000000000100001
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGAC.................................................22202.204400000000000010000000100801212000013050000100000000000000000000000
...............................TATCAGCGAACCCTTCGACG.........................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000010001000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCATTT...........................................28201.8036000010000000200000000000060600001023330002121000000020000000001
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACC..............................................................................................................................................26201.40281509100000000000000000000000002000000001000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATCTAGCC-.......................................................................................2831.334000000000000000000000000000100001000110000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCC....................................................................................................................................................20201.3026102000000000000000000003115112140100002100000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCAA.............................................26201.2525000000000000000000000000434000000045131000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGA..................................................21201.2525000000000000000000000002068203000040000000000000000000000000000
...............................TATCAGCGAACCCTTCGACGTCATT--..................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
...........................CCATTATCAGCGAACCCTTCGA...........................................................................................................................................................................................................................................................2211.001000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATCTA...........................................................................................2531.003002000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTAT..............................................................................................2231.003000000000000000000000000000000000001200000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCC.....................................................................................................................................................19201.0020101001001000000000000002100104112001102000000000000000000000000
...............................TATCAGCGAACCCTTCGACGTT.......................................................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATT..................................................................................................................................................................................................................................................................................24201.0020000000000000000000000000207000007004000000000000000000000000000
...............................TATCAGCGAACCCTTCGACGTCA......................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
...............................TATCAGCGAACCCTTCGACGTCATT--G------------------------G........................................................................................................................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
...............................TATCAGCGAACCCTTCGACGTCATT--G------------------------.........................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
..........................GCCATTATCAGCGAACCCTTCGACGTCA......................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
...........................CCATTATCAGCGAACCCTTCGACGTC.......................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................TATCAGCGAACCCTTCGACGTCATT--G------------------------GA.......................................................................................................................................................................................................................2811.001000000000000000000000000010000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATTT.................................................................................................................................................................................................................................................................................25200.9519000000200000400000000003103000001001030100000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGTTT........................................................................................................................................32200.9519000000000000000000000000000000000000000020302140022010000200000
..GTTAGAGAAATGCGCATCGATATTGCCA..............................................................................................................................................................................................................................................................................28200.7515000000100000100000000000006000007000000000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATTA............................................................................................2430.672000000000000000000000000000000000020000000000000000000000000000
.........................................................................................................................................................................................CTATGGATACACAGCTGCTATCTAGCC-C......................................................................................2830.672001000000000000000000000001000000000000000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCAC...............................................................................................................................................26200.6513008100000000000000000000002001000000000000000000000000000001000
..GTTAGAGAAATGCGCATCGATA....................................................................................................................................................................................................................................................................................22200.5511000000200000100000000000401010002000000000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCA................................................................................................................................................25200.5511002000000000000000000000030100001000400000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCT...................................................................................................................................................21200.5511001010000000000000000001100203000001010000000000000000000000000
............................CATTATCAGCGAACCCT...............................................................................................................................................................................................................................................................1720.501000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................ACGCGCACGATATGGCAG....................................................................................................................18200.459000010002030000000000002000100000000000000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACT..............................................................................................................................................27200.459003200000000000000000000100000000000300000000000000000000000000
..GTTAGAGAAATGCGCATCGATAT...................................................................................................................................................................................................................................................................................23200.408000000000000000000000002000000111003000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCAA...............................................................................................................................................25200.408000000000000000000000000103000000003001000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAG...................................................20200.408001010000000000000002000000200000002000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGTTTG.......................................................................................................................................33200.408000000000000000000000000000000000000000011101000101000000200000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCT................................................................................................................................................24200.408002100000000000000000000011010000011000000000000000000000000000
.....................................................ATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCAC...............................................................................................................................................24200.357007000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GAGTTTCAAGCTGCATTAGACGC...............................................23200.357006000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTC...............................................................................................21200.357001001000001000000000000000000000100003000000000000000000000000
..................................................................................................................................................................................................................CC-CGAGCATGCAGCTTAG.......................................................................18200.357000000100010000000000001200100000000001000000000000000000000000
.........................................................................................................................................................................................CTATGGATACACAGCTGCTATCT............................................................................................2330.331001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATCTAGCT-.......................................................................................2830.331000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................AGCCTATGGATACACAGCTGCTATAA............................................................................................2630.331000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATCTAGA.........................................................................................2730.331000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................TGGATACACAGCTGCTATCTAGCC-C......................................................................................2530.331000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATC.............................................................................................2330.331001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TATGGATACACAGCTGCTATCTAGC.........................................................................................2530.331001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TACACAGCTGCTATCTAGCC-CGAGCAT................................................................................2730.331000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................ATGGATACACAGCTGCTATCTAGCC-C......................................................................................2630.331000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATG.............................................................................................2330.331000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTATACT...........................................................................................2530.331000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTG..................................................................................................18200.306000000211000100000000000000000000010000000000000000000000000000
.....................................................ATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACT..............................................................................................................................................25200.306005000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATT.....................................................18200.306000040000000000000000000000000010000001000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGC......................................................................................................................................................18200.255000000000000000000000002000000000000012000000000000000000000000
........................................................................................................................................................................................CCTATGGATACACAGCTGCTT...............................................................................................21200.255000000000000100000000000000000000010003000000000000000000000000
.TGTTAGAGAAATGCGCATCGATA....................................................................................................................................................................................................................................................................................23200.255000000100000000000000000000000030000010000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCC....................................................................................................................................................23200.255001000000000000000000000002000001001000000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTC.................................................................................................................................................24200.255004000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................AGCTGCTATCTAGCC-CGAGCATG...............................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATTGC................................................................................................................................................................................................................................................................................26200.255000000100000200000000000001000000000010000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGG...........................................................................................................................................29200.255005000000000000000000000000000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGA......................................................................................................................................................................................................................................................................................20200.255001000000000000000000000101000001010000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCATC............................................27200.204001000000000000000000000000120000000000000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTT..................................................................................................................................................25200.204001000000000100000000000000000001000001000000000000000000000000
.TGTTAGAGAAATGCGCATCGATATT..................................................................................................................................................................................................................................................................................25200.204000000000000000000000000001300000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCT..............................................25200.204000000000000000000000011000000001001000000000000000000000000000
.................................................................................................................................................................................................................................TTAGCGAGTTTCAAGCTGCATTAGACG................................................27200.204003000000000000000000000000000001000000000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCT...................................................................................................................................................24200.204000000000000000000000000102000000000010000000000000000000000000
..GTTAGAGAAATGCGCATCGAT.....................................................................................................................................................................................................................................................................................21200.204000000200000000000000000001000001000000000000000000000000000000
......................................................................................................................................................................................AGCCTATGGATACACAGCTGC.................................................................................................21200.204000000000000000000000000000200000010100000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTG.............................................................................................................................................28200.153002000000000000000000000000000000000100000000000000000000000000
.............................................TCGACGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCC....................................................................................................................................................27200.153001000000000000000000000010100000000000000000000000000000000000
.........................................................................................................................................................TCACTGGGTTTGTACGCGCAC..............................................................................................................................21200.153000020000000000000000000001000000000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTT.............................................................................................................................................27200.153001000000000000000000000002000000000000000000000000000000000000
......................................................................................................................................................................................AGCCTATGGATACACAGCTG..................................................................................................20200.153000000000000000000000000000200000010000000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCC.....................................................................................................................................................22200.153000000000000000000000000001200000000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCATA..............................................................................................................................................26200.153000000000000000000000000011000010000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTG.................................................................................................................................................23200.153000000000000000000000000001000000000010100000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCATAA.............................................................................................................................................27200.153000000000000000000000000102000000000000000000000000000000000000
......................................................................................................................................................................................................................................GAGTTTCAAGCTGCATTAGACGCAT.............................................25200.153001000000000000000000000001000010000000000000000000000000000000
.....................................................ATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTC.................................................................................................................................................22200.153002000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................AGTTTCAAGCTGCATTAGACG................................................21200.153001000000000000000000000010000000000001000000000000000000000000
.......................................................................................................................................................................................................................................AGTTTCAAGCTGCATTAGACGCATTT...........................................26200.102002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGAT.................................................22200.102000020000000000000000000000000000000000000000000000000000000000
................................................ACGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCA................................................................................................................................................28200.102000000000000000000000000000000001000001000000000000000000000000
...TTAGAGAAATGCGCATCGATATT..................................................................................................................................................................................................................................................................................23200.102000000000020000000000000000000000000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTCTA...........................................................................................................................................29200.102000000000000000000000000020000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATTGCCAT.............................................................................................................................................................................................................................................................................29200.102000000000000000000000000000000000000020000000000000000000000000
.................................................................................................................................................................TTTGTACGCGCACGATATGGC......................................................................................................................21200.102000000000000000000000000011000000000000000000000000000000000000
......................................................TT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGG............................................................................................................................................26200.102001000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................TTTGTACGCGCACGATATGGCAG....................................................................................................................23200.102000000000000000000000000000200000000000000000000000000000000000
.................................................................................................................................................................................................................GCC-CGAGCATGCAGCTTAG.......................................................................19200.102000000000000000000000001000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCATTTA..........................................29200.102000000000000000000000000000000000000000000000000000000000000002
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGT...............................................24200.102000000100000000000000000000000000010000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATTC.................................................................................................................................................................................................................................................................................25200.102000000100000000000000000100000000000000000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACC..............................................................................................................................................27200.102101000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTGTACGCGCACGATATGGCA.....................................................................................................................21200.102000000200000000000000000000000000000000000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTC.................................................................................................................................................26200.102000000000000000000000000010000000000000000000000000000000000001
........................................................................................................................................................................................CCTATGGATACACAGCTGT.................................................................................................19200.102000000001000100000000000000000000000000000000000000000000000000
......GAGAAATGCGCATCGATATT..................................................................................................................................................................................................................................................................................20200.102001010000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TATAGACGACGCAAGGGGGCG---G...................22200.102000000000000000000000000000200000000000000000000000000000000000
...........ATGCGCATCGATATTGCCAT.............................................................................................................................................................................................................................................................................20200.102000010000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................TTTCAAGCTGCATTAGACGCA..............................................21200.102001000000000000000000000000000000000100000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCAAA..............................................................................................................................................26200.102000000000000000000000000000100000000010000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGTT.........................................................................................................................................32200.102000000000000000000000000000000000000000000002000000000000000000
......GAGAAATGCGCATCGATATTGCCATTA...........................................................................................................................................................................................................................................................................27200.102000000000000000000000000002000000000000000000000000000000000000
.........................................................................................................................................................................................CTATGGATACACAGCTGCTA...............................................................................................20200.102000000001000000000000000000000001000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCATG..............................................................................................................................................26200.102000010000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................AGCCTATGGATACACAGCTGCT................................................................................................22200.102000000000000000000000000000000020000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATT....................................................................................................................................................................................................................................................................................22200.102000000000000000000000000000000000001001000000000000000000000000
........................................................................................CAC------------------------------------------------------AAAGCCCTTCACTGGGTT.........................................................................................................................................21200.102001000000000000000000000000100000000000000000000000000000000000
.....................................................ATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTG.............................................................................................................................................26200.102001000000000000000000000000100000000000000000000000000000000000
.....................ATATTGCCATTATCAGCGAAC..................................................................................................................................................................................................................................................................21200.102000000000000000000000000001000000001000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGTT..............................................25200.102000000000000000000000000000100000000001000000000000000000000000
..GTTAGAGAAATGCGCATCGATATTTAA...............................................................................................................................................................................................................................................................................27200.102000000000000000000000000001000000000010000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCAC...............................................................................................................................................28200.102000000100000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................TAGCC-CGAGCATGCAGCTTAG.......................................................................21200.102000010000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................TACGCGCACGATATGGCAGCCTATGG.............................................................................................................26200.102002000000000000000000000000000000000000000000000000000000000000
............TGCGCATCGATATTGCCATTATCA........................................................................................................................................................................................................................................................................24200.051000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCATG............................................27200.051000000000000000000000000000000000000010000000000000000000000000
CTGTTAGAGAAATGCGCATCGATATTGC................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTATAGACGACGCAAGGGGGCG---T...................23200.051000000000010000000000000000000000000000000000000000000000000000
................CATCGATATTGCCATTATCAGCGAAC..................................................................................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................TTGTACGCGCACGATATGGC......................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TACGCGCACGATATGGCAGCCTATG..............................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TGGGTTTGTACGCGCACGATATGGCA.....................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
.......AGAAATGCGCATCGATATTGCCATTATC.........................................................................................................................................................................................................................................................................28200.051000000000000000000000000100000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATAAAA.................................................................................................................................................................................................................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GACGACGCAAGGGGGCG---G...................18200.051000000000000000000000000100000000000000000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTT.................................................................................................................................................26200.051000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGCTA.............................................26200.051000000000000000000000000001000000000000000000000000000000000000
..........................................CCTTCGACGTCATT--G------------------------GAGAAC...................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATAAA................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
................................................ACGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCC.....................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.......................ATTGCCATTATCAGCGAACCC................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTTGTACGCGCACGATATGGCA.....................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
......................................................TT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCA................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GCGAGTTTCAAGCTGCATTAGACG................................................24200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................GCGAGTTTCAAGCTGCATTAGACGCAT.............................................27200.051000000000000000000000000000000000010000000000000000000000000000
.TGTTAGAGAAATGCGCATCGATAT...................................................................................................................................................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
...................CGATATTGCCATTATCAGCGAAC..................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000001000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCTTA..............................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGC......................................................................................................................................................21200.051000000000000000000000000000000001000000000000000000000000000000
.......................................................T--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGTT.........................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CACGATATGGCAGCCTATGGATA..........................................................................................................23200.051000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTCAAGCTGCATTAGACG................................................18200.051000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAGACGTTG.............................................26200.051000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................GCGAGTTTCAAGCTGCATTA....................................................20200.051000000000000000000000000000000000010000000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTT.................................................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GCAGCTTAGCGAGTTTCAAGC...........................................................21200.051000000000000000000000000000000000010000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGT..........................................................................................................................................30200.051000000000000000000000000000000000000000000001000000000000000000
..GTTAGAGAAATGCGCATCGATATA..................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................TTGTACGCGCACGATATGGCAA....................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................GCTGCATTAGACGCATTTATAGACGA...................................26200.051000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................GGTTTGTACGCGCACGATATG........................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
......GAGAAATGCGCATCGATATTGCCA..............................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
.TGTTAGAGAAATGCGCATCGATATTT.................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TAGACGACGCAAGGGGGCG---G...................20200.051000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................TAGACGCATTTATAGACGACGC................................22200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................TACGCGCACGATATGGCAGCCTATGGA............................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
................................................ACGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGC......................................................................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................GCTTAGCGAGTTTCAAGCTGCATTAG...................................................26200.051000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................AGTTTCAAGCTGCATTAGACGCAT.............................................24200.051000000000000000000000000001000000000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCAT...............................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
..................................................GTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCAC...............................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTTA............................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
.........................TGCCATTATCAGCGAACCC................................................................................................................................................................................................................................................................19200.051000000000000000000000000100000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATG..................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000001000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTA.............................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATTGA................................................................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
.................................................CGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCC...................................................................................................................................................24200.051000000000000100000000000000000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATAG...................................................................................................................................................................................................................................................................................23200.051000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGAGTTTCAAGCTGCATTAA...................................................20200.051000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................CCTTCACTGGGTTTGTACGCGCACGA............................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACCC.............................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
...............................................GACGTCATT--G------------------------GAGAACAC------------------------------------------------------AAAGC......................................................................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTTATAGACGACGCAAGGGGGCG---GA..................25200.051000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CGCATTTATAGACGACGCAAGG............................22200.051000000000000000000000000001000000000000000000000000000000000000
..GTTAGAGAAATGCGCATCGATATGT.................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCACTGGGTTTGTACGCGCACGA............................................................................................................................44200.051000000000000000000000000000000000000000000000000001000000000000
....................................................CATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCTTCC................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................CTAGCC-CGAGCATGCAGCTTAG.......................................................................22200.051000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTATAGACGACGCAAGGGGGCG---GAAGG...............27200.051000000000000000000000000000000000000100000000000000000000000000
.TGTTAGAGAAATGCGCATCGATATTGCC...............................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AAGCTGCATTAGACGCATT............................................19200.051000000000000000000000001000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AAGCTGCATTAGACGCAT.............................................18200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................AGCGAGTTTCAAGCTGCATTAGACG................................................25200.051000000000000000000000000100000000000000000000000000000000000000
............TGCGCATCGATATTGCCATTATCAGC......................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................AGCCTATGGATACACAGCTGT.................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
...................................................TCATT--G------------------------GAGAACAC------------------------------------------------------AAAGCCCT...................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
..........................................CCTTCGACGTCATT--G------------------------GAGAACAC------------------------------------------------------AAA........................................................................................................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................AGCC-CGAGCATGCAGCTTAGCG.....................................................................22200.051000000000000000000000000010000000000000000000000000000000000000
droMoj3
CCATTAGGGAATTATGTATAGATGTAGCTTTTCTCAGTGAGCCTCACCACTGTAGAACCAGCTGCCCTAGGACATGGTCAACAGACGTTAATGGCAAAGCTGCGTTGTGGGTATGCGGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTACTTTCGAATGTT-------------AAGTCA--TTCAATGGG-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................ACAGACGTTAATGGCAAAGCTGCGTTG.................................................................................................................................................................................................27205.7011411300001
...........................................................................................................TGGGTATGCGGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTAC..........................................28202.855737000200
..............................TTCTCAGTGAGCCTCACCACTGTAGA....................................................................................................................................................................................................................................................26201.50303000000
...........................................................................................................TGGGTATGCGGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTACT.........................................29200.306600000
...................................................................TAGGACATGGTCAACAGACGTTAAT................................................................................................................................................................................................................25200.255500000
....................................................................................................................GGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTACTTTC......................................23200.204400000
.................................................................................CAGACGTTAATGGCAAAGCTGCG....................................................................................................................................................................................................23200.153000030
...........................................................................................................TGGGTATGCGGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTAT..........................................28200.102200000
...............................................................GCCCTAGGACATGGTCAACAGACG.....................................................................................................................................................................................................................24200.102000020
....................................................................................................................GGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTACTTT.......................................22200.102000020
............................................................................................................GGGTATGCGGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CT.............................................24200.102200000
....................................................................................................................GGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTACTTTCGA....................................25200.102200000
..........................................CTCACCACTGTAGAACCAGCTGCCCT........................................................................................................................................................................................................................................26200.051000010
..............................................................TGCCCTAGGACATGGTCAACAGACGTTAA.................................................................................................................................................................................................................29200.051000010
.....................ATGTAGCTTTTCTCAGTGAGCCTCACC............................................................................................................................................................................................................................................................27200.051000010
...............................................................................................................................................................................................................................................................TACTTTCGAATGTT-------------AAGTCA--G.........21200.051100000
..............................................................................................................................................................................................................................................................TTACTTTCGAATGTT-------------AAGTCA--TTCAA.....26200.051100000
........................................................ACCAGCTGCCCTAGGACATGGTCAAC..........................................................................................................................................................................................................................26200.051100000
...................AGATGTAGCTTTTCTCAGTGAGCCTCA..............................................................................................................................................................................................................................................................27200.051100000
................................................................................ACAGACGTTAATGGCAAAGCTGCT....................................................................................................................................................................................................24200.051000001
...............................................................................................................TATGCGGCAACTCAAC--------------------------------------------------------------------G-------------------AA------------------------------------CTTAC..........................................24200.051100000
dp5
CCCTGCA--AACTCAGCAATGTGCT---------------------------------------------------------------------------------------------------------------------------GGCAGGAGACGGATTAGTGCGCGCGAGAGCTGGCAACCTATGGGTATACAGCTGCTACCTAGCGCCCAGTCTACCCCTCGAGTCCTTCGCCCGAATCATTGAGGAACTAGCTGAAGGCGCAAGAAACCGCGGGGCAGTCCTAATCGCTG---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................AGACGGATTAGTGCGCGCGAGA............................................................................................................................2211.0010100000000
..................................................................................................................................................................TAGTGCGCGCGAGAGCTGG.......................................................................................................................1911.0010100000000
................................................................................................................................................................................................TATACAGCTGCTACCTAGCGCCCA....................................................................................2431.0030300000000
............................................................................................................................................................................................TGGGTATACAGCTGCTACCTAGC.........................................................................................2360.6740400000000
.................................................................................................................................................................................................ATACAGCTGCTACCTAGCGCCCAGTCT................................................................................2730.6720200000000
................................................................................................................................................................................................TATACAGCTGCTACCTAGCGCCC.....................................................................................2330.6720200000000
................................................................................................................................................................................................TATACAGCTGCTACCTAGCGCCCAG...................................................................................2530.6720200000000
........................................................................................................................................................................................CCTATGGGTATACAGCTGCTACC.............................................................................................2370.5740400000000
...TGCA--AACTCAGCAATGTGCT---------------------------------------------------------------------------------------------------------------------------GG......................................................................................................................................................2230.3310100000000
.........AACTCAGCAATGTGCT---------------------------------------------------------------------------------------------------------------------------GGCAGG..................................................................................................................................................2230.3310100000000
............................................................................................................................................................................................TGGGTATACAGCTGCTACCTAGCGCCC.....................................................................................2730.3310100000000
......................................................................................................................................................................................................................................TCCTTCGCCCGAATCATTGAGGAAC.............................................2530.3310100000000
............................................................................................................................................................................................TGGGTATACAGCTGCTACCTAGCGC.......................................................................................2560.3320200000000
................................................................................................................................................................................................TATACAGCTGCTACCTAGCGCC......................................................................................2230.3310010000000
...........................................................................................................................................................................................................................TACCCCTCGAGTCCTTCGCCCGAAT........................................................2540.2510100000000
...........................................................................................................................................................................................................................TACCCCTCGAGTCCTTCGCCCGAATCA......................................................2740.2510100000000
...............................................................................................................................................................................................................................CCTCGAGTCCTTCGCCCGAATCA......................................................2340.2510100000000
..................................................................................................................................................................................................................................CGAGTCCTTCGCCCGAATCATTGAG.................................................2540.2510100000000
........................................................................................................................................................................................CCTATGGGTATACAGCTGCTACCTAGC.........................................................................................2760.1710100000000
........................................................................................................................................................................................CCTATGGGTATACAGCTGCTACCTAG..........................................................................................2660.1710100000000
................................................................................................................................................................................................TATACAGCTGCTACCTAGCGC.......................................................................................2160.1710100000000
............................................................................................................................................................................................TGGGTATACAGCTGCTACCTAGCGT.......................................................................................2560.1710100000000
........................................................................................................................................................................................CCTATGGGTATACAGCTGCTAC..............................................................................................2270.1410100000000
.........................................................................................................................................................................................CTATGGGTATACAGCTGCTAC..............................................................................................2170.1410100000000
droPer2
CTCAGCA--ATGTGCT------------------------------------------------------------------------------------------------------------------------------------GGCAGGAGACGGATTAGTGCGCGCGAGAGCTGGCAACCTATGGGTATACAGCTGCTACCTAGCGCCCAGTCTACCCCTCGAGTCCTTCGCCCGAATCATTGAGGAACTAGCTGAAGGCGCAAGAAACCGCGGGGCAGTCCTAATCGCTG---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................TGAGGAACTAGCTGAAGG...................................1811.001010000
..................................................................................................................................................................TAGTGCGCGCGAGAGCTGG.......................................................................................................................1911.001010000
.......................................................................................................................................................AGGAGACGGATTAGTGCGCGCG...............................................................................................................................2211.001010000
...................................................................................................................................................................................................................................................TCATTGAGGAACTAGCTGAAGGCGC................................2511.001010000
.....................................................................................................................................................................................................................CCAGTCTACCCCTCGAGTCCTTCGCC.............................................................2630.331010000
.....................................................................................................................................................................................................................CCAGTCTACCCCTCGAGTCCTTCGCCC............................................................2730.331010000
...........................................................................................................................................................................CGAGAGCTGGCAACCTATGGGTATACA......................................................................................................2740.251010000
............................................................................................................................................................................................TGGGTATACAGCTGCTACCTAGCGC.......................................................................................2590.111010000
..........................................................................................................................................................................................TATGGGTATACAGCTGCTACCT............................................................................................22110.091010000
droAna3
CGGTGGTCGAAGCGAGGGCAGACGTGGCCATCCTTAGCGAGCCCTACAGCGTCGGAGTGGGAGA------GGAGTGGGTGACGGATACGTCTGGAAAGGCGGGAATCTGG-------------------------------------------------------------------------------------CTATCTGTTACATAGCACCCAGCTTGTCCCTCGATGCTTTCTGTAAGGTCTTGGAAGACTTAGTGATCGACGCCAGAGGCAAGCACCCAGTGCTCATAGCAGGG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................TAGTGATCGACGCCAGAGGCAAG......................2333.6711911000
...............................................................................................................................................................................................................................................................TAGTGATCGACGCCAGAGGCAAGC.....................2432.337520000
.............................................................................GTGACGGATACGTCTGGAAAGGC........................................................................................................................................................................................................2312.002200000
..............................TCCTTAGCGAGCCCTACAGCGTCGGAG...................................................................................................................................................................................................................................................2712.002200000
...............................................................................................................................................................................................................................................................TAGTGATCGACGCCAGAGGCAAGCACC..................2732.006600000
............................................TACAGCGTCGGAGTGGGAGA------G.....................................................................................................................................................................................................................................2111.001100000
.............................ATCCTTAGCGAGCCCTACAGCGTCG......................................................................................................................................................................................................................................................2511.001100000
..................................TAGCGAGCCCTACAGCGTCGGAGTG.................................................................................................................................................................................................................................................2511.001100000
............................................TACAGCGTCGGAGTGGGAGA------GG....................................................................................................................................................................................................................................2211.001100000
.......................................................................................................................................................................................................................................................................GACGCCAGAGGCAAGCACCCAGTGC............2551.005050000
.............................ATCCTTAGCGAGCCCTACAGCGTCGG.....................................................................................................................................................................................................................................................2611.001100000
..............AGGGCAGACGTGGCCATCCTTAGC......................................................................................................................................................................................................................................................................2421.002200000
.............................................................................GTGACGGATACGTCTGGAAAGGCGGG.....................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................TCGACGCCAGAGGCAAGCACCCAGTGCTC..........2950.804040000
...................................................................................................................................................................................................................ACCCAGCTTGTCCCTCGATGCTT..................................................................2330.672200000
...............................................................................................................................................................................................................................................................TAGTGATCGACGCCAGAGGCAA.......................2230.672200000
.....................................................................................................................................................................................................................................................................TCGACGCCAGAGGCAAGCACCCAG...............2450.603030000
....................GACGTGGCCATCCTTAGCGAGC..................................................................................................................................................................................................................................................................2220.501010000
......................................................................................................................................................................................................................................GCTTTCTGTAAGGTCTTGGAAGACT.............................................2560.503210000
.......................................................................................................................................................................................................................................................................GACGCCAGAGGCAAGCACCCAGTGCTC..........2750.402020000
...................................................................................................................................................................................................................................................................GATCGACGCCAGAGGCAAGCACC..................2350.402020000
.....................................................................................................................................................................................................................................................................TCGACGCCAGAGGCAAGCACCCAGTGC............2750.402110000
..................................................................................................................................................................................................................................................................TGATCGACGCCAGAGGCAAGCAC...................2330.331010000
................................................................................................................................................................................................................................................................AGTGATCGACGCCAGAGGCAA.......................2130.331100000
.................................................................................................................................................................................................................................................................GTGATCGACGCCAGAGGCAAGCACC..................2530.331100000
.............................................................................................................................................................................................................................TCCCTCGATGCTTTCTGTAAGGTCTTG....................................................2730.331100000
..................................................................................................................................................................................................................................................................TGATCGACGCCAGAGGCAAGCACC..................2430.331010000
..............................................................................................................................................................................................................................................................................GAGGCAAGCACCCAGTGCTCATAGC.....25120.334040000
...............................................................................................................................................................................................................................................................TAGTGATCGACGCCAGAGGCAAGCA....................2530.331100000
..........................................................................................................................................................................................................................TTGTCCCTCGATGCTTTCTGTAAGGT........................................................2630.331010000
.............................................................................................................................................................................................................................TCCCTCGATGCTTTCTGTAAGGTC.......................................................2430.331100000
.............................................................................................................................................................................................................................TCCCTCGATGCTTTCTGTAAGGTCT......................................................2530.331100000
.............................................................................................................................................................................................................................TCCCTCGATGCTTTCTGTAAGGTCTT.....................................................2630.331100000
...........................................................................................................................................................................................................................................................GACTTAGTGATCGACGCCAGA............................2130.331100000
.......................................................................................................................................................................................................................................................................GACGCCAGAGGCAAGCACCCAGTGCTCA.........2840.251100000
.................................................................................................................................................................................................................................TCGATGCTTTCTGTAAGGTCTTGGA..................................................2540.251100000
.....................................................................................................................................................................................................................................................................TCGACGCCAGAGGCAAGCACCCAGC..............2550.201010000
.....................................................................................................................................................................................................................................................................TCGACGCCAGAGGCAAGCACCC.................2250.201010000
......TCGAAGCGAGGGCAGACGTGG.................................................................................................................................................................................................................................................................................2150.201100000
.....................................................................................................................................................................................................................................................................TCGACGCCAGAGGCAAGCACCCA................2350.201100000
...TGGTCGAAGCGAGGGCAGACGTGG.................................................................................................................................................................................................................................................................................2450.201100000
.....................................................................................................................................................................................................................................................................TCGACGCCAGAGGCAAGCACC..................2150.201010000
...................................................................................................................................................................................................................................................................GATCGACGCCAGAGGCAAG......................1950.201100000
...................................................................................................................................................................................................................................................................GATCGACGCCAGAGGCAAGCACCCA................2550.201010000
...................................................................................................................................................................................................................................................................GATCGACGCCAGAGGCAAGCAC...................2250.201010000
..........AGCGAGGGCAGACGTGGCCATC............................................................................................................................................................................................................................................................................2260.171100000
....................................................................................................................................................................................................................................ATGCTTTCTGTAAGGTCTTGG...................................................2160.171100000
.......................................................................................................................................................................................................................................CTTTCTGTAAGGTCTTGGAAGACT.............................................2460.171100000
..........AGCGAGGGCAGACGTGGC................................................................................................................................................................................................................................................................................1860.171100000
............................................................................................................................................................................................................................................................................CAGAGGCAAGCACCCAGTGCT...........21130.152020000
CGGTGGTCGAAGCGAGGGCAG.......................................................................................................................................................................................................................................................................................21200.153300000
........................................................................................................................................................................................................................................TTTCTGTAAGGTCTTGGAAGAC..............................................2270.141010000
...........................................................................................................................................................................................................................................CTGTAAGGTCTTGGAAGACT.............................................2080.131000010
CGGTGGTCGAAGCGAGGGCAGA......................................................................................................................................................................................................................................................................................22200.102200000
..........................................................................................................................................................................................................................................................................GCCAGAGGCAAGCACCCAGTGCTC..........24120.081010000
CGGTGGTCGAAGCGAGGGCA........................................................................................................................................................................................................................................................................................20200.051010000
.GGTGGTCGAAGCGAGGGCAGAC.....................................................................................................................................................................................................................................................................................22200.051100000
CGGTGGTCGAAGCGAGGGCAGG......................................................................................................................................................................................................................................................................................22200.051001000
..GTGGTCGAAGCGAGGGCAGAC.....................................................................................................................................................................................................................................................................................21200.051100000
droBip1
CCGTAGGCGAGGTGAATGCTGACATAGCAATACTCATTGAGCCGTACAGCGTCGGGCCAGGCGA------GGAGTGGGCGACCAAC---------------------------------------------------------------------------------------------------------AATCAGGGCTGCTACCTAGCCCCAAGCCTCTCACTCGATGCTTACTGCAAGGCTCTAGAGGAGCTTGCGGTAGATGCCAGAGGCAAACACGCAGTGCTAATAGCAGGT-SizeHit CountTotal NormTotal
No Reads
droKik1
ATGCGCCGGAGCTGCGCGACACCAA---------------------------------------------------------------------------------------------------------------------------AGCAGCGGAAGGATTCGTCCGAGCGAACATTGGCGGCATCTGGCTGTACAGCTGCTACTTGGCACCCAGTCTCTCACTGGAGGCGTTCGGCAGGATTCTGGACGAGCTGAGCAGCGATCTGCGTGGACGGAGCAACGTTGTGGTTGGCGGC-SizeHit CountTotal NormTotal
No Reads
droFic1
GAGCCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAGGAACACCTATATATATAGTTGCTACATACCCCCGAGAATCCCGTTGCCAGACTTCCAAATAATAATCGAGGAAATAGCTCAAGATGCAAATGAGAAATCTTCCGTCATCATCGCTGGA-SizeHit CountTotal NormTotal
No Reads
droEle1
CTGTGCGGGAAATCCAAGCCGATGTGGCGATAATCAGCGAGCCGTACAAAAAGACTTCCGGGTC------GGACTTCGTACTGGATACTACTAAGTCTGCGGCGATCTTG------------------------------ACG--------------------------ATTGGGTCA-------------------------------------TTTTCGAGCAACGGTGAACGAGGTTTTAATCTGGACGAACTGATGGACGACGCAAGGGGAAGGCGGAACGTTATCATCGCTGGC-SizeHit CountTotal NormTotal
No Reads
droRho1
TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTTTAGCTGCTACTTTCCACCCAGCTGGACACTAGAGGAGTTTAGCGAGACGATAGACAGCCTGGCAAACGACATAAGAGCACACTCCCCTGCGATTATTGCTGGG-SizeHit CountTotal NormTotal
No Reads
droBia1
CGGTGCGCGAACTGGGTGCTGAGGTGGCGATACTCAATGAGCCCTACAGAGTTAAAAGCAGTGA------CGATTGGGCTAC-GATCGCACAGGCAAAACGGCACTGTGGCTCTGCGAAGTGGCTGCACCACCCATGCGGGACACAAGGGCAGCAGAGGGGTTCGGAC--------GTAGGCGGCACATGGCTCTACAGCTGCTACCTGATGA------------------TCTTAAGCAGGATCCTGGACGAGCTGAGCAGTGACCTGAGAGGACAAAGCAACGTAGTGATCGGAGGC-SizeHit CountTotal NormTotal
No Reads
droTak1
CCGTGCGCGAAGTAGGAACAGAGGTGGCGATTCTAAGCGAGCCTTACAGGACAGGAACCAGCAG------AGAGTGGATCGCAGACCGCACAGGCAAAGCTGCTATCTGGTTGTGCGGCTTGGAAGCAACCAGACTCAGCGAAGTCTGGGCTGCAAAAGGCTTCGTGC--------G-------------------------------------------------------------------------TGGGCTGATAGACG--------------------------GGGTCTGGG-SizeHit CountTotal NormTotal
No Reads
droEug1
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTGTACAGCTGCTACCTAGCCCCAAGCCTCTCACTCGATGCTTACTGCAAGGCTCTAGAGGAGCTTGCGGTCGATGCCAGAGGCAAGCACCCAGTGCTAATAGCAGGTGSizeHit CountTotal NormTotal
No Reads
dm3
CGGTGCGTGAACGCAGAGTGGAGCTTGCGTTACTTAGCAAGCCCTACCGGACGGCTTTC------------------------GACCGCGCCAAGAAAGCAGCGATCTGGAGGTGCAGCAGCGAAGCCTTACAATTAAGCAATAATTTTTCGGACAACTG------------GTTTGTTAGGGA--------------------------------------------------AAGGTGGGCAGATGGTGTGTGTGGAGCACCATGCTAGAGGCCGCACCTAGGTACTCATAGCTGGC-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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................................................................................................................................................................................................................................................................GGAGCACCATGCTAGAGGCCG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TTGTTAGGGA--------------------------------------------------AAGGTGGGCAGA......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................TAAGCAATAATTTTTCGGACAACTG------------G...............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................CTGGAGGTGCAGCAGCGAAGC.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GA--------------------------------------------------AAGGTGGGCAGATGGTGTG...............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TGTGGAGCACCATGCTAGAGGCCGC......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................AGCCCTACCGGACGGCTTTC------------------------G........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GTGGAGCTTGCGTTACTTAGC......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
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.............................................................................................................................................................CTG------------GTTTGTTAGGGA--------------------------------------------------AAGGTG............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TAGGGA--------------------------------------------------AAGGTGGGCAGATGGTGTG...............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
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..........................................................................................................................................................CAACTG------------GTTTGTTAGGGA--------------------------------------------------AAGGTG............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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CGGTGCGTGAACGCAGAGTGGAGC....................................................................................................................................................................................................................................................................................2430.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
CGGTGCGTGAACGCAGAGTGGA......................................................................................................................................................................................................................................................................................2230.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................AAGAAAGCAGCGATCTGGAGGTGCAG......................................................................................................................................................................................26100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
AGGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTGTACAGCGTATACCTAGCTCCCAGCCTGACCTTAATCGCATTCAGTCGGGCATTGGATAGACTGGCAGCGGATGCTTGAGGCCGCACCCAGGTTCTCATAGCTGGC-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGATAGACTGGC.........................................26427.251090001005140470510000
..........................................................................................................................................................................................................................................................TAGACTGGCAGCGGATGCTTGAGGC.........................25112.001200000030108000000
..........................................................................................................................................................................................................................................TCAGTCGGGCATTGGATAGACTGGC.........................................2549.00360001000100190150000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCT................................................................................24108.408400252814300032000000
.................................................................................................................................................................................................................................TAATCGCATTCAGTCGGGCATTGGA..................................................2578.145700400012111576020000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCGGA...................................2446.50260002001210002000000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCGGGCA.......................................................2635.331600000005030080000
................................................................................................................................................................................................................................TTAATCGCATTCAGTCGGGCATTGGA..................................................2675.29370001001412512020000
......G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTGTA........................................................................................................17164.6975000000100074000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCTGA..............................................................................26104.40440000002315015000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGC..................................................................................22104.1041000500200033100000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCC.................................................................................23103.60360003140101017000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCTGAC.............................................................................27103.1031000128000002000000
AGGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGG............................................................................................................1913.00300000000002100000
..........................................................................................................................................................................................................................................................TAGACTGGCAGCGGATGCTTGAGGCCGC......................2813.00300000030000000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCTG...............................................................................25102.1021000100201017000000
...............................................................................................................................................................................................................................................................TGGCAGCGGATGCTTGAGGCCGCA.....................2412.00200000000002000000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGC......................................2141.75700000000002050000
...........................................................................................................................................................................................................................................CAGTCGGGCATTGGATAGACTGGC.........................................2441.75700000010002040000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCC.....................................................................................19121.6720000001500005000000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCGGGC........................................................2561.671000000018000010000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCCA....................................................................................23111.551700000003170060000
...............................................................................................................................................................................................................................................CGGGCATTGGATAGACTGGCAGCGGA...................................2641.50600000040000020000
...............................................................................................................................................................................................................................................................TGGCAGCGGATGCTTGAGGCCGCACC...................2611.00100010000000000000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCGGGCAT......................................................2711.00100000000000010000
..............................................................................................................................................................................................................................................................CTGGCAGCGGATGCTT..............................1611.00100000000001000000
AGGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTG..........................................................................................................2111.00100000000001000000
................................................................................................................................................................................................................................................................GGCAGCGGATGCTTGAGGC.........................1911.00100000000001000000
............................................................................................................................................................................................................................................................................TTGAGGCCGCACCCAGGTTC............2011.00100000000001000000
..........................................................................................................................................................................................................................................................TAGACTGGCAGCGGATGCTTGAG...........................2311.00100000000001000000
...............................................................................................................................................................................................................................................................TGGCAGCGGATGCTTGAGGCCGCAC....................2511.00100000000001000000
...............................................................................................................................................................................................................................................................TGGCAGCGGATGCTTGAGGCC........................2111.00100000000001000000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCGGGCATT.....................................................2811.00100000000000001000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCGT....................................2341.00400000000001030000
................................................................................................................................................................................................................................................................GGCAGCGGATGCTTGAGGCCGCAC....................2411.00100000000001000000
..........................................................................................................................................................................................................................................................TAGACTGGCAGCGGATGCTTGAGG..........................2411.00100000000001000000
.........................................................................................................................................................................................................................................................................TGCTTGAGGCCGCACCCAGGA..............2111.00100000000001000000
.....................................................................................................................................................................................................................................................TTGGATAGACTGGCAGCGGATGCTTGA............................2711.00100000010000000000
...................................................................................................................................................................................................................................................................AGCGGATGCTTGAGGCCGCACCCAGG...............2611.00100000000100000000
AGGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTAA.........................................................................................................2211.00100000000001000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCC......................................................................................18160.9415000000000015000000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCCAGA..................................................................................25100.90900000007020000000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAG.......................................2040.75300000000000030000
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGATAGA..............................................2140.75300000010002000000
....................................................................................................................................................................................................CAGCGTATACCTAGCT........................................................................................16160.6911000000000011000000
....................................................................................................................................................................................................................................TCGCATTCAGTCGGGCATTGGATAGA..............................................2630.67200000000011000000
.....................................................................................................................................................................................................................................CGCATTCAGTCGGGCATTGGATAGACT............................................2730.67200000011000000000
............................................................................................................................................................................................................................GACCTTAATCGCATTCAGTCGGGCAT......................................................2630.67200000000000020000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCCAGC..................................................................................2590.67600000005000010000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCA....................................................................................20120.58700000000205000000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGT.............................................................2070.57400000002020000000
....................................................................................................................................................................................GCAGATGGTGGGTGTA........................................................................................................16160.56900000000009000000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCGGG...................................2440.50200000000001010000
AGGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTTC.........................................................................................................2220.50100000000001000000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCGG....................................2340.50200010000000010000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCGGAT..................................2540.50200000010000010000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGATT....................................2340.50200000000000002000
....................................................................................................................................................................................................................................TCGCATTCAGTCGGGCATTGGATAG...............................................2570.43300000000003000000
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGATAGACTGGT.........................................2670.43300000000000030000
..................................................................................................................................................................................................................................AATCGCATTCAGTCGGGCATTGGA..................................................2470.43300010010001000000
....................................................................................................................................................................................................CAGCGTATACCTAGC.........................................................................................15200.40800000000008000000
...................................................................................................................................................................................................................................ATCGCATTCAGTCGGGCATTGGATAGACT............................................2930.33100000010000000000
.....................................................................................................................................................................................................................................CGCATTCAGTCGGGCATTGGATAGA..............................................2530.33100000000000010000
..............................................................................................................................................................................................................................CCTTAATCGCATTCAGTCGGGCATTGGA..................................................2830.33100000001000000000
...................................................................................................................................................................................................................................ATCGCATTCAGTCGGGCATTGGATAGA..............................................2730.33100000010000000000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCCAGCC.................................................................................2690.33300010002000000000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCC......................................................................................21150.33500000001001012000
.....................................................................................................................................................................................................................................CGCATTCAGTCGGGCATTGGATAGAC.............................................2630.33100100000000000000
...................................................................................................................................................................................................................................ATCGCATTCAGTCGGGCATTGGATAGAC.............................................2830.33100000000001000000
....................................................................................................................................................................................................................................TCGCATTCAGTCGGGCATTGGATAGAC.............................................2730.33100100000000000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCTGT..............................................................................26100.30300000000003000000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCGTT.........................................................2470.29200000001010000000
......................................................................................................................................................................................................................................GCATTCAGTCGGGCATTGGA..................................................2070.29200000000002000000
................................................................................................................................................................................................................................TTAATCGCATTCAGTCGGGCATTGG...................................................2570.29200000001100000000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCGG..........................................................2370.29200000000100010000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCC.....................................................................................22110.27300000001010010000
......................................................................................................................................................................................................................................................TGGATAGACTGGCAGCGGA...................................1980.25200000001000010000
........................................................................................................................................................................................................................................................GATAGACTGGCAGCGGA...................................1780.25200000000002000000
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGATAGACTGGCA........................................2740.25100000000000001000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCGGC...................................2440.25100000000000010000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCGGTA..................................2540.25100000000001000000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGT......................................2140.25100000000000010000
.........................................................................................................................................................................................................................................................ATAGACTGGCAGCGGA...................................1680.25200000000002000000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCG.....................................2240.25100000000000010000
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGATAGACTG...........................................2440.25100000000001000000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCAA....................................2340.25100000000000010000
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGATAGACT............................................2340.25100000000010000000
................................................................................................................................................................................................................................................GGGCATTGGATAGACTGGC.........................................1940.25100000000001000000
.............................................................................................................................................................................................................................................GTCGGGCATTGGATAGACTGGC.........................................2240.25100000000001000000
................................................................................................................................................................................................................................................GGGCATTGGATAGACTGGCAGCGGA...................................2540.25100000001000000000
....................................................................................................................................................................................................................................................ATTGGATAGACTGGCAGCGT....................................2040.25100000000001000000
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGATAGACTGG..........................................2540.25100000000001000000
......................................................................................................................................................................................................................................................TGGATAGACTGGCAGCGGATGCT...............................2340.25100000001000000000
........................................................................................................................................................................................................................................ATTCAGTCGGGCATTGGATAGACTGGC.........................................2740.25100000000001000000
......................................................................................................................................................................................................................................................TGGATAGACTGGCAGCGGAA..................................2080.25200000001000010000
....................................................................................................................................................................................................................................................ATTGGATAGACTGGCAGCGGA...................................2140.25100000001000000000
..........................................................................................................................................................................................................................................TCAGTCGGGCATTGGATAGA..............................................2040.25100000000001000000
................................................................................................................................................................................................................................................GGGCATTGGATAGACTGGCAGT......................................2240.25100000000000010000
.................................................................................................................................................................................................................................................GGCATTGGATAGACTGGCAGCGC....................................2340.25100000000000001000
............................................................................................................................................................................................................................................AGTCGGGCATTGGATAGACTG...........................................2140.25100000000001000000
........................................................................................................................................................................................................................................ATTCAGTCGGGCATTGGATAGACT............................................2440.25100100000000000000
..............................................................................................................................................................................................................................................TCGGGCATTGGATAGACTGGCAGCGG....................................2640.25100000000000010000
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGATAGAC.............................................2240.25100000000001000000
...........................................................................................................................................................................................................................................CAGTCGGGCATTGGATAGACTGGCAG.......................................2640.25100000000000010000
...GTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTG..........................................................................................................1890.22200000000002000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCC................................................................................24100.20200000000002000000
................................................................................................................................................................................................TGTACAGCGTATACCTAGCTCCCA....................................................................................24110.18200000000101000000
...........................................................................................................................................................................................GTGGGTGTACAGCGTATA...............................................................................................18180.17300000000003000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCT.................................................................................23120.17200000000101000000
.................................................................................................................................................................................................................................TAATCGCATTCAGTCGGGCATT.....................................................2270.14100000000000010000
.....................................................................................................................................................................................................................................CGCATTCAGTCGGGCATTGGATA................................................2370.14100000001000000000
................................................................................................................................................................................................................................TTAATCGCATTCAGTCGGGCATTGGATA................................................2870.14100000001000000000
.................................................................................................................................................................................................................................TAATCGCATTCAGTCGGGCATTGGATA................................................2770.14100000010000000000
........................................................................................................................................................................................................................GCCTGACCTTAATCGCATTCAGT.............................................................2370.14100000000001000000
................................................................................................................................................................................................................................TTAATCGCATTCAGTCGGGCATTG....................................................2470.14100000000000010000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCGCTT........................................................2570.14100000000010000000
.................................................................................................................................................................................................................................TAATCGCATTCAGTCGGGCATTGGT..................................................2570.14100000010000000000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCG...........................................................2270.14100000001000000000
.................................................................................................................................................................................................................................TAATCGCATTCAGTCGGGCATTG....................................................2370.14100000000100000000
.................................................................................................................................................................................................................................TAATCGCATTCAGTCGGGCATTGG...................................................2470.14100000000000010000
...........................................................................................................................................................................................................................TGACCTTAATCGCATTCAGTCGA..........................................................2370.14100000001000000000
...........................................................................................................................................................................................................................................CAGTCGGGCATTGGATA................................................1780.13100000000001000000
......G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTGT.........................................................................................................16160.13200000000002000000
............................................................................................................................................................................................................................................................GACTGGCAGCGGATGCT...............................1780.13100000000001000000
...................................................................................................................................................................................................................TCCCAGCCTGACCTTAATCGCATT.................................................................2480.13100000001000000000
.........................................................................................................................................................................................................TATACCTAGCTCCCAGCCTGACCTTAAT.......................................................................2880.13100000000100000000
...........................................................................................................................................................................................................TACCTAGCTCCCAGCCTGACCTTAAT.......................................................................2680.13100010000000000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTC.......................................................................................17160.13200000000002000000
.......................................................................................................................................................................................................................................................GGATAGACTGGCAGCGGA...................................1880.13100000000001000000
..........................................................................................................................................................................................................................................................TAGACTGGCAGCGGAT..................................1690.11100000000001000000
...............................................................................................................................................................................................................................CTTAATCGCATTCAGT.............................................................1690.11100000000100000000
.................................................................................................................................................................................................................................TAATCGCATTCAGTCGGGCA.......................................................2090.11100000000001000000
........................................................................................................................................................................................................................................ATTCAGTCGGGCATTGGA..................................................1890.11100000000001000000
...GTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGT...........................................................................................................1790.11100000000001000000
.........................................................................................................................................................................................TGGTGGGTGTACAGCGTATACCTAGC.........................................................................................26180.11200000000002000000
...........................................................................................................................................................................................GTGGGTGTACAGCGTA.................................................................................................16180.11200000000002000000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCCAGCCTGA..............................................................................2990.11100000001000000000
............................................................................................................................................................................................................................GACCTTAATCGCATTCAGTCGG..........................................................2290.11100000000000010000
..........................................................................................................................................................................................................................................................TAGACTGGCAGCGGA...................................1590.11100000000001000000
.........................................................................................................................................................................................TGGTGGGTGTACAGCGTATA...............................................................................................20180.11200000000002000000
.........................................................................................................................................................................................................................................TTCAGTCGGGCATTGGA..................................................1790.11100000000001000000
..................................................................................................................................................................................................................................AATCGCATTCAGTCGGGCA.......................................................1990.11100000000001000000
................................................................................................................................................................................................TGTACAGCGTATACCTAGCTCCCAGCA.................................................................................2790.11100000000000010000
......G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGATGGTGGGTGTG........................................................................................................17190.11200000000002000000
........................................................................................................................................................................................................GTATACCTAGCTCCCAGCCTGT..............................................................................22100.10100000000001000000
...........................................................................................................................................................................................................................................CAGTCGGGCATTGGA..................................................15100.10100000000001000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCTGACC............................................................................28100.10100010000000000000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCCAGAA.................................................................................26100.10100000001000000000
.....................................................................................................................................................................................................AGCGTATACCTAGCTCCCAGCCTGAC.............................................................................26100.10100010000000000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCTTT..............................................................................26100.10100000000001000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCTGC..............................................................................26100.10100000000001000000
.......................................................................................................................................................................................................CGTATACCTAGCTCCCAGCCTG...............................................................................22100.10100000000001000000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCCAG...................................................................................24100.10100000001000000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGCCTGACCG...........................................................................29100.10100000000001000000
.....................................................................................................................................................................................................AGCGTATACCTAGCTCCCAGCCTGA..............................................................................25100.10100010000000000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAGA..................................................................................22110.09100000000100000000
....................................................................................................................................................................................................CAGCGTATACCTAGCTCCCAG...................................................................................21110.09100000000001000000
.................................................................................................................................................................................................GTACAGCGTATACCTAGCTCCCAGCT.................................................................................26110.09100000000000010000
..........................................................................................................................................................................................................ATACCTAGCTCCCAGCCTGA..............................................................................20120.08100000000001000000
..........................................................................................................................................................................................................ATACCTAGCTCCCAGCC.................................................................................17120.08100000000001000000
..........................................................................................................................................................................................................ATACCTAGCTCCCAGCCTGT..............................................................................20120.08100000000001000000
................................................................................................................................................................................................................................TTAATCGCATTCAGTC............................................................16130.08100000010000000000
droSec2
CGGTGCGTGAACGCAGAGTGGAGCTTGCGCTACTTATCGAGCCCTACCGTACGGCGGCTGGCCC------AGACTGGGCTTTCGACCG------------------------------------------------------------------------------------------------------------------------------------------------CATCAATAAAGCACTGGACAGACTGGCAGCGGATGTTAGAGGCCGCACCCAGGTTCTCATAGCGGGC-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........CGCAGAGTGGAGCTTGCGCTACT..........................................................................................................................................................................................................................................................................23121.251515000
...........CGCAGAGTGGAGCTTGCGCTAC...........................................................................................................................................................................................................................................................................22120.6783014
...........CGCAGAGTGGAGCTTGCGCTACTT.........................................................................................................................................................................................................................................................................2490.4442011
...........CGCAGAGTGGAGCTTGCGCTACTA.........................................................................................................................................................................................................................................................................24120.4252030
...........CGCAGAGTGGAGCTTGCGCTA............................................................................................................................................................................................................................................................................21120.2533000
...........CGCAGAGTGGAGCTTGCGCTACTTA........................................................................................................................................................................................................................................................................2590.2221010
.....CGTGAACGCAGAGTGGAGCTT..................................................................................................................................................................................................................................................................................2180.1310100
...TGCGTGAACGCAGAGTGGAGCTTGC................................................................................................................................................................................................................................................................................2580.1311000
...TGCGTGAACGCAGAGTGGAGCTTGCGC..............................................................................................................................................................................................................................................................................2780.1311000
...........CGCAGAGTGGAGCTTGCGCTACTTT........................................................................................................................................................................................................................................................................2590.1111000
...TGCGTGAACGCAGAGTGGAGC....................................................................................................................................................................................................................................................................................21200.1021010
............GCAGAGTGGAGCTTGCGCTACTA.........................................................................................................................................................................................................................................................................23120.0811000
...........CGCAGAGTGGAGCTTGCGC..............................................................................................................................................................................................................................................................................19120.0810010
............GCAGAGTGGAGCTTGCGCTACT..........................................................................................................................................................................................................................................................................22120.0811000
.....................................................................................................................................................................................................................................................CTGGACAGACTGGCAGCGGAT..................................21200.0510100
......................................................................AGACTGGGCTTTCGACCG------------------------------------------------------------------------------------------------------------------------------------------------CA..................................................................20200.0510001
droYak3
CCATGCGCGAAGTCCAAGCTGACGTAGCGCTAATAAGCGAGCCGTATAAGAAAACCCCCGGGGC------AGACTACATACTGGACGGTACAAGAAGAGCCCCAATCCTG------------------------------ATC--------------------------AACGGGACAAGGCGACCTGTGCCTGTACAGCTGCTATCTACCACCACGCCATTCCCTTCAGGAATTTTCGGCAGTTATAGACGAGCTGGGTAACGACGCAAGAGGCGAGCGGAACGTGGTCATCGCTGGT-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................GGTACAAGAAGAGCCCCAATCCTG------------------------------ATC--------------------------...................................................................................................................................2719.00903000000006
............................................................................................................................................................................................................................................TCGGCAGTTATAGACGAGCTGGG.........................................2314.00404000000000
.......................................................................................................................................................................................................CTGCTATCTACCACCACGCCATTCCC...........................................................................2612.00202000000000
..........................GCGCTAATAAGCGAGCCGT...............................................................................................................................................................................................................................................................19131.9225000000000025
.......................................................................................................................................................................................................CTGCTATCTACCACCACGCCATTCCCT..........................................................................2711.00101000000000
.......................................................................................................................................................................................................CTGCTATCTACCACCACGCCATTC.............................................................................2411.00101000000000
.............................................................................................................................................TC--------------------------AACGGGACAAGGCGACCTGTGCC............................................................................................................2511.00100100000000
............................................................................................................................................................................................................................................TCGGCAGTTATAGACGAGCTGGGT........................................2411.00101000000000
.......................................................................................GTACAAGAAGAGCCCCAATCCTG------------------------------................................................................................................................................................................2311.00101000000000
.............................................................................................................................................TC--------------------------AACGGGACAAGGCGACCTGTGCCTG..........................................................................................................2711.00101000000000
............................................................................................................................................................................................................................................TCGGCAGTTATAGACGAGCTGGGTAA......................................2611.00101000000000
.............................................................................................................................................TC--------------------------AACGGGACAAGGCGACCTGTGCCT...........................................................................................................2611.00101000000000
.........................AGCGCTAATAAGCGAGCCGT...............................................................................................................................................................................................................................................................20130.7710000000000010
...........................CGCTAATAAGCGAGCCGT...............................................................................................................................................................................................................................................................18130.69900000000009
................................................................................................................................................................................................................................CTTCAGGAATTTTCGGCAGTTATAGAC.................................................2720.50110000000000
.....................................................................................................................................................................................................................................GGAATTTTCGGCAGTTATAGACGAGCT............................................2720.50101000000000
..................................................................................................................................................................................................................................TCAGGAATTTTCGGCAGTTATAGACG................................................2620.50101000000000
.......................................................................................................................................................................................................................................................................GACGCAAGAGGCGAGCGGAACGTGGT...........2620.50101000000000
....................................................................................................................................................................................................................................................................AACGACGCAAGAGGCGAGCGGAACG...............2520.50101000000000
............................................................................................................................................................................................................................................TCGGCAGTTATAGACGAGCTG...........................................2120.50101000000000
..................................................................................................................................................................................................................................................................................CGAGCGGAACGTGGTCATCGCTGG..2430.33101000000000
..................................................................................................................................................................................................................................................................................CGAGCGGAACGTGGTCATCGCT....2230.33101000000000
..............................................TAAGAAAACCCCCGGGGC------AGACTACA..............................................................................................................................................................................................................................2640.25101000000000
.........................................CCGTATAAGAAAACCCCCGGGGC------AG....................................................................................................................................................................................................................................2550.20101000000000
.................GCTGACGTAGCGCTAATAAGCGAGC..................................................................................................................................................................................................................................................................2560.17101000000000
.................GCTGACGTAGCGCTAATAAGCGAG...................................................................................................................................................................................................................................................................2460.17101000000000
................AGCTGACGTAGCGCTAATAAGCGAGCC.................................................................................................................................................................................................................................................................2760.17101000000000
................AGCTGACGTAGCGCTAATAAGCGA....................................................................................................................................................................................................................................................................2460.17101000000000
..............CAAGCTGACGTAGCGCTAATAAGCG.....................................................................................................................................................................................................................................................................2560.17100000010000
................AGCTGACGTAGCGCTAATAAGCGAG...................................................................................................................................................................................................................................................................2560.17101000000000
................AGCTGACGTAGCGCTAATAAGCGAGAA.................................................................................................................................................................................................................................................................2760.17101000000000
............TCCAAGCTGACGTAGCGCTAATAAGCT.....................................................................................................................................................................................................................................................................2770.14101000000000
.........................................CCGTATAAGAAAACCCCCGGGG.............................................................................................................................................................................................................................................2270.14101000000000
.......CGAAGTCCAAGCTGACGTAGCGC..............................................................................................................................................................................................................................................................................23110.09101000000000
.CATGCGCGAAGTCCAAGCTGACGTA..................................................................................................................................................................................................................................................................................25110.09100000010000
droEre2
GCGGGCTCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGGTTAGAGGTGGGTGGGTGTACAGCGTATACCTAGCCCTCAGTCTGAACAAAAGCGAATTCAGCCAGGCAGTAGACAGTCTGCCGTCGGATGCTAGAGATCGCACCCCGGTCCTTATTGCTGGC-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 07:57 AM