ID:

dwi_368

 Coordinate:

scf2_1100000004401:804278-804428 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.7 -20.4 -20.3

Flybase annnotation

CDS [Dwil\GK10275-cds]; exon [dwil_GLEANR_10217:3]; intron [Dwil\GK10275-in]

Repeatable elements

NameClassFamilyStrand
(CAT)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCGATAGTCCATGTGGATGTCGATTATGTTAATTGCAATGATGATGATGATGCTGATGATTGTTATGATGATAATAATGTCTGTCAACAAATTTCCGCTTGACTGAAGTTTGATACCACTTTTGCCTAAAATTTTGATCACCTTCACCTTTTTTCTAATTTTGTTGATGTATTTGATTTGCTGCTGTTGTTGTATTTGCAGGCCTCTCCAAGCGGCCATTGGGGCCACCGCATCGTAAAAGCAGTCTACCA
**************************************************....(((.((((((((....))))))))))).(((((((((............(((((..((((......(((.....))).....)))).))))).............)))))))))............((((.............))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V119
head
 M020
head
 V117
male body
....................................AATGATGATGATGATGCTGATGATT.............................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
....................................AATGATGATGATGATGCTGATG................................................................................................................................................................................................. 22 0 6 1.17 7 6 0 1 0 0
....................................AATGATGATGATGATGCTGATGA................................................................................................................................................................................................ 23 0 6 1.17 7 7 0 0 0 0
.....................................................................................AACAAATTTCCGCTTGACTGAAGT.............................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
........................................................................................AAATTTCCGCTTGACTGAAG............................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
......................................................................................ACAAATTTCCGCTTGACTGAAGT.............................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................TTGGGGCCACCGCATCGTAA............. 20 0 1 1.00 1 0 0 1 0 0
.........................................................................................................................................................................................GTTTTTGTGTCTGCAGGCCTC............................................. 21 3 5 0.60 3 0 3 0 0 0
.......................................GATGATGATGATGCTGATGATTGT............................................................................................................................................................................................ 24 0 2 0.50 1 0 0 0 1 0
.......................................GATGATGATGATGCTGATGATT.............................................................................................................................................................................................. 22 0 2 0.50 1 0 1 0 0 0
....................................AATGATGATGATGATGCTGA................................................................................................................................................................................................... 20 0 8 0.25 2 2 0 0 0 0
................................................................................................GCTTGACTCTAGTTTGATA........................................................................................................................................ 19 2 5 0.20 1 0 1 0 0 0
....................................AATGATGATGATGATGCTG.................................................................................................................................................................................................... 19 0 14 0.14 2 2 0 0 0 0
....................................................................................................GATTGCAGTTTGATACCACC................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0
..................................GAAATGATGATGATGATGCTGGTGAT............................................................................................................................................................................................... 26 2 8 0.13 1 0 0 0 0 1
...............................................................................................CGCTTGACTCTAGTTTGACA........................................................................................................................................ 20 3 11 0.09 1 0 1 0 0 0
..........................................GATGATGATGCTGATGAT............................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................TTTGTTGATGTAGTTGATTA........................................................................ 20 2 20 0.05 1 1 0 0 0 0
.......................................GATGATGATGATGCTGATG................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

GGCTATCAGGTACACCTACAGCTAATACAATTAACGTTACTACTACTACTACGACTACTAACAATACTACTATTATTACAGACAGTTGTTTAAAGGCGAACTGACTTCAAACTATGGTGAAAACGGATTTTAAAACTAGTGGAAGTGGAAAAAAGATTAAAACAACTACATAAACTAAACGACGACAACAACATAAACGTCCGGAGAGGTTCGCCGGTAACCCCGGTGGCGTAGCATTTTCGTCAGATGGT
**************************************************....(((.((((((((....))))))))))).(((((((((............(((((..((((......(((.....))).....)))).))))).............)))))))))............((((.............))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
..................................................................................................................TGGTGAAAAAGGATTTTA....................................................................................................................... 18 1 3 0.33 1 0 1
........................................................................................................................................................................................ACAAAAACACAGACGTCCGGAG............................................. 22 3 3 0.33 1 1 0
.......................................................................................................................................................................................................................GGTGAGCCCGGTGGGGTAG................. 19 3 18 0.06 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004401:804228-804478 - dwi_368 CCGATAG------------TCC----ATG---TGGATGTCGATTATGTTAATTGCAAT---GATGATGATGATGCTGATGATTGTTAT---GAT---------------------------------GATAATAATGTCTGTCAACAAATTTCCGCTT------------------------GACTGAAGTTTGATACCACTTTTG------------------------------------------------CCT----------A----------AAATTTTGATCACCTT------CACCTTTTTTCTAATTTTGTTGATGT----------------------------------------------------------------ATTT----GAT------------------TTGCTGCTGT------------------TGTT---GTATTTGCAGGCCTCTCCAAGCGGCCATTGGGGCCACCGCATCGTAAAAGCAGTCTACCA
droVir3 scaffold_12928:4676432-4676669 + CCTCTG-------------CCG----GCAACAACAACAACAACA---ACAACTGCAACAAAAACAGCAGC------AAATACA-----CCC------------------------------------------------ACTTGACTGATTTCCGCCTCTCGAATATATTT-----TT-------------TTTTTGTCGT-----GTTA-----ACCGTATCTGT---------ATCTGCAACGAAATTTAGCTGTA------------------------------------------------------------------------------------------------------------------------------TGCTATACTTATCTAATTTGAGC----------------------------------TTGGAACATTTTCTCATCCGCAGGTCTCTCCAATCGGCCATTGGGCCCGCCACATCGCAAGAGCAGTCTACCA
droMoj3 scaffold_6473:13780894-13781015 - CCGATAATCGGCTTACCAC-------ATG---CTAATGCTGATAATGACAATGACGAC---GACGATGATGATGATGATGATGATTAT---AAT---------------------------------GATAATGATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATAAGCCGAGCATTTGATTAAAGTCAAATAC--
droGri2 scaffold_14853:1573370-1573718 + CCAGCG-------------TCG----TCAACAACAACA-CAACA---G------------------------------CAACA-----CCA------------------------------------------------ACTTGATA-ATTTCCGTTCCGTGAATATTTTTTATATTC-------------TTCTTTTCTG-----TTTAATGATGATGACGCCGACGTATCTGTATCCGCAACTAAATCTATATCTATATCTTATAT----------AATTTGCATCTCGCTCTTACACCTTGTTCACTTC------ATCTGCGTCTCTTCAATGATTATGTATAATTGTATCATATATATATATTTATATATGCATATTTGTTGCGATATTTAACTAAT------------------TTGCTGCTCGCTTTCCGATATTTG----TGTC---A-ACTTGCAGGTTTGTCCAATCGGCCATTGGGCCCGCCACATCGCAAGAGCAGTCTACCA
dp5 XL_group3a:1755272-1755485 + CTTGAA-------------CAACTGAGCAACGATGACA-AGACG---G------------------------------GCTCG-----AGC------------------------------------------------GCTCGACAGATTTCCGCTC---------------------------------------------------A-----AGCGCAGCTGTAGAACAAATATTGGTATCCAAATTTTTGCCT----------C----------AATTTGTGCTCCTCCCAATAACCCCACTCTCTCTATTTCTATCTGCCTCTCCCC----------------------------------------------------------------------------------------------------------------------------CTGTGAAGGTCTCTCCAAACGGCCATTGGGACCGCCACATCGTAAAAGCAGTCTACCA
droPer2 scaffold_52:43007-43220 - CTTGAA-------------CAACTGAGCAACGATGACA-AGACG---G------------------------------GCTCG-----AGC------------------------------------------------GCTCGACAGATTTCCGCTC---------------------------------------------------A-----AGCGCAGCTGTAGAACAAATATTGGTATCCAAATTTTTGCCT----------C----------AATTTGTGCTCCTCCCAATAACCCCACTCTCTCTATTTCTATCTGCCTATCCCC----------------------------------------------------------------------------------------------------------------------------CTGTGAAGGTCTCTCCAAACGGCCATTGGGACCGCCACATCGTAAAAGCAGTCTACCA
droAna3 scaffold_13117:3632631-3632683 - C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCCTCTCGAAACGTCCTCTAGGACCGCCGCACCGGAAAAGCAGTCTACCA
droBip1 scf7180000396499:73563-73628 - TTATTA-------------TACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACAGGCCTCTCGAAACGCCCTCTAGGACCGCCGCACCGGAAAAGCAGTCTACCA
droKik1 scf7180000302577:1453174-1453312 - TTTATA-------------TAA----AA------------------------------------------------ATTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTATATCCTTATATTCTCCATTTTTTTTTATAT----------------------------------------------------------------TCTTAAAAATATTAATC----------------------------------ATAGATTATT---A-TATTGCAGGCCTCTCAAAACGGCCACTGGGGCCGCCGCATCGTAAAAGCAGTCTACCA
droFic1 scf7180000454050:619164-619228 - TTTTTT-------------TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGCAGGTCTATCCAAGCGACCGATGGGCCCACCGCATCGTAAAAGCAGTCTACCA
droEle1 scf7180000491272:296460-296649 + TCGGATG------------ATG----ATGATGATGATGATGATG---ATGATGATGAT---GATGATGATGAT------GATGATGAT---GAT---------------------------------GATGATGATG---------ATGA-------T---------------------GACTCCAGGACGTTGTTAGCGCTGTTG------------------------------------------------CT-----------GCCACTTGGCTGCTTTATGTCATTGCTGGTTAAGCGATGCGTCTAATTTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGCCGAAGCTGGACGGCTCCTCCAAG
droRho1 scf7180000779914:756129-756185 + TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGGTCTCTCAAAACGACCGCTGGGGCCGCCGCATCGTAAAAGCAGTCTACCA
droBia1 scf7180000298389:319611-319667 - TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGGTCTCTCCAAGCGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCA
droTak1 scf7180000415192:245243-245300 + ACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAGGTCTCTCCAAGCGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCA
droEug1 scf7180000409110:1123642-1123698 - TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGTCTCTCAAAACGACCACTGGGCCCGCCGCATCGTAAAAGCAGTCTACCA
dm3 chrX:12720732-12720852 + CCGATG-------------ACG----ATGGGAATGCAAGCGATG---ATGAATCCAAT---GATAATGATGAT---GATGAT---------GAT---------------------------------GATGATGCAGTTCGCCAAACAAC-------T------------------------GACAGGACATCATTCGCCCATTTG------------------------------------------------GCC----------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTTGAT---------------
droSim2 x:12061546-12061867 - dsi_17698 TCGACAGGTATCCAAGTCT-------GTC---T-GGGGCAAAAAAGCATGGTGCGGGT---GGCCAAGAACATAAAGATGACACATAA---AATCCTTAGAAGCACTATCGTTAAATAACACATGGTGTGAACAGGG--------------CCCACCTATCGTATAAATTT-----CCACACATCACAAACTTTTTGACATTTCAC------------------------------------------------CT-----------ACCATT-------TTCGTGCTAATCTAACTAAGCTGAGTCATTTT-----TCGTTATA-------------------------------------------------------------------------AGATCATTTAGAAAATGAAAATTCCCGCTGA--------TATCAGTAATCGTT---C-AATCGCAGGTCTCTCCAAACGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCA
droSec2 scaffold_21:464144-464223 + TTGATA-------------ATT----ACCATGACAATGATGATGATGA--ATGATGAC---GATAACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGATGTCGATGATAAT---GATGATGATGATGA
droYak3 X:6982521-6982579 - TAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCAGGTCTCTCCAAACGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCA
droEre2 scaffold_4690:14144937-14144992 + TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGGTCTCTCCAAGCGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CCGATAG------------TCC----ATG---TGGATGTCGATTATGTTAATTGCAAT---GATGATGATGATGCTGATGATTGTTAT---GAT---------------------------------GATAATAATGTCTGTCAACAAATTTCCGCTT------------------------GACTGAAGTTTGATACCACTTTTG------------------------------------------------CCT----------A----------AAATTTTGATCACCTT------CACCTTTTTTCTAATTTTGTTGATGT----------------------------------------------------------------ATTT----GAT------------------TTGCTGCTGT------------------TGTT---GTATTTGCAGGCCTCTCCAAGCGGCCATTGGGGCCACCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................AAT---GATGATGATGATGCTGATGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200020
.......................................................AAT---GATGATGATGATGCTGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2261.17700061
.......................................................AAT---GATGATGATGATGCTGATGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2361.17700070
...............................................................................................................................................AACAAATTTCCGCTT------------------------GACTGAAGT...................................................................................................................................................................................................................................................................................................................................2411.00100010
..................................................................................................................................................AAATTTCCGCTT------------------------GACTGAAG....................................................................................................................................................................................................................................................................................................................................2011.00100010
................................................................................................................................................ACAAATTTCCGCTT------------------------GACTGAAGT...................................................................................................................................................................................................................................................................................................................................2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGGCCACCGCATCGTAA.............2011.00100001
.............................................................GATGATGATGATGCTGATGATTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50110000
.............................................................GATGATGATGATGCTGATGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000
.......................................................AAT---GATGATGATGATGCTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.25200020
.......................................................AAT---GATGATGATGATGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.14200020
................................................................GATGATGATGCTGATGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
.............................................................GATGATGATGATGCTGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100001
droVir3
CCTCTG-------------CCG----GCAACAACAACAACAACA---ACAACTGCAACAAAAACAGCAGC------AAATACA-----CCC------------------------------------------------ACTTGACTGATTTCCGCCTCTCGAATATATTT-----TT-------------TTTTTGTCGT-----GTTA-----ACCGTATCTGT---------ATCTGCAACGAAATTTAGCTGTA------------------------------------------------------------------------------------------------------------------------------TGCTATACTTATCTAATTTGAGC----------------------------------TTGGAACATTTTCTCATCCGCAGGTCTCTCCAATCGGCCATTGGGCCCGCCACATCGCAAGAGCAGTCTACCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................AACAACAACAACAACA---ACAACTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
..................................AACAACAACA---ACAACTGCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
......................................ACAACA---ACAACTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.051000000000000000000000000000000000000000000000000100000000000000
....................CG----GCAACAACAACAACAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
............................AACAACAACAACAACA---ACAACTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
..............................CAACAACAACAACA---ACAACTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.............................ACAACAACAACAACA---ACAACTGCAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000010000000000000000000000000000000000000000000000
................................ACAACAACAACA---ACAACTGCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.................................CAACAACAACA---ACAACTGCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CCGATAATCGGCTTACCAC-------ATG---CTAATGCTGATAATGACAATGACGAC---GACGATGATGATGATGATGATGATTAT---AAT---------------------------------GATAATGATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGATAAGCCGAGCATTTGATTAAAGTCAAATAC--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................ATGATGATGATGATTAT---AA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331010000
droGri2
CCAGCG-------------TCG----TCAACAACAACA-CAACA---G------------------------------CAACA-----CCA------------------------------------------------ACTTGATA-ATTTCCGTTCCGTGAATATTTTTTATATTC-------------TTCTTTTCTG-----TTTAATGATGATGACGCCGACGTATCTGTATCCGCAACTAAATCTATATCTATATCTTATAT----------AATTTGCATCTCGCTCTTACACCTTGTTCACTTC------ATCTGCGTCTCTTCAATGATTATGTATAATTGTATCATATATATATATTTATATATGCATATTTGTTGCGATATTTAACTAAT------------------TTGCTGCTCGCTTTCCGATATTTG----TGTC---A-ACTTGCAGGTTTGTCCAATCGGCCATTGGGCCCGCCACATCGCAAGAGCAGTCTACCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
CTTGAA-------------CAACTGAGCAACGATGACA-AGACG---G------------------------------GCTCG-----AGC------------------------------------------------GCTCGACAGATTTCCGCTC---------------------------------------------------A-----AGCGCAGCTGTAGAACAAATATTGGTATCCAAATTTTTGCCT----------C----------AATTTGTGCTCCTCCCAATAACCCCACTCTCTCTATTTCTATCTGCCTCTCCCC----------------------------------------------------------------------------------------------------------------------------CTGTGAAGGTCTCTCCAAACGGCCATTGGGACCGCCACATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................AACTGAGCAACGATGACA-AGACG---G------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000002
...........................................................................................................................................................................................................................................................................................GTGCTCCTCCCAATAACCCCACTCTCT............................................................................................................................................................................................................2711.0010000000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACGGCCATTGGGACCGCCACAT..................2511.0010100000000
droPer2
CTTGAA-------------CAACTGAGCAACGATGACA-AGACG---G------------------------------GCTCG-----AGC------------------------------------------------GCTCGACAGATTTCCGCTC---------------------------------------------------A-----AGCGCAGCTGTAGAACAAATATTGGTATCCAAATTTTTGCCT----------C----------AATTTGTGCTCCTCCCAATAACCCCACTCTCTCTATTTCTATCTGCCTATCCCC----------------------------------------------------------------------------------------------------------------------------CTGTGAAGGTCTCTCCAAACGGCCATTGGGACCGCCACATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCCTCTCGAAACGTCCTCTAGGACCGCCGCACCGGAAAAGCAGTCTACCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGACCGCCGCACCGGA..............1911.001001000
droBip1
TTATTA-------------TACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACAGGCCTCTCGAAACGCCCTCTAGGACCGCCGCACCGGAAAAGCAGTCTACCASizeHit CountTotal NormTotal
No Reads
droKik1
TTTATA-------------TAA----AA------------------------------------------------ATTTATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACTATATCCTTATATTCTCCATTTTTTTTTATAT----------------------------------------------------------------TCTTAAAAATATTAATC----------------------------------ATAGATTATT---A-TATTGCAGGCCTCTCAAAACGGCCACTGGGGCCGCCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotal
No Reads
droFic1
TTTTTT-------------TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGCAGGTCTATCCAAGCGACCGATGGGCCCACCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotal
No Reads
droEle1
TCGGATG------------ATG----ATGATGATGATGATGATG---ATGATGATGAT---GATGATGATGAT------GATGATGAT---GAT---------------------------------GATGATGATG---------ATGA-------T---------------------GACTCCAGGACGTTGTTAGCGCTGTTG------------------------------------------------CT-----------GCCACTTGGCTGCTTTATGTCATTGCTGGTTAAGCGATGCGTCTAATTTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGCCGAAGCTGGACGGCTCCTCCAAGSizeHit CountTotal NormTotal
No Reads
droRho1
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGGTCTCTCAAAACGACCGCTGGGGCCGCCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotal
No Reads
droBia1
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGGTCTCTCCAAGCGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotal
No Reads
droTak1
ACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAGGTCTCTCCAAGCGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotal
No Reads
droEug1
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGGTCTCTCAAAACGACCACTGGGCCCGCCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotal
No Reads
dm3
CCGATG-------------ACG----ATGGGAATGCAAGCGATG---ATGAATCCAAT---GATAATGATGAT---GATGAT---------GAT---------------------------------GATGATGCAGTTCGCCAAACAAC-------T------------------------GACAGGACATCATTCGCCCATTTG------------------------------------------------GCC----------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTTGAT---------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................TGAT---GATGAT---------GAT---------------------------------GATGATG............................................................................................................................................................................................................................................................................................................................................................................................202032.70654000000000000000005000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000800044500000410000000000000000000000000000000000000000000000000000000000000071000000000007500000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GATGATG............................................................................................................................................................................................................................................................................................................................................................................................232018.5537100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002470000000000000000010000000000000002000000060000000000000000000000000081000000000003200000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------GATGA..............................................................................................................................................................................................................................................................................................................................................................................................222016.55331000000000000000000000300000000000130000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000070004000000000000000000000000000000000000000000000000000000000000000309000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------GA.................................................................................................................................................................................................................................................................................................................................................................................................192010.1520300000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000790000000000030000004100000000000000000000000000000000000000000000000000000000000000068000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGAT---GATGAT---------GAT---------------------------------GATGA..............................................................................................................................................................................................................................................................................................................................................................................................18209.701940000000000000000000000000000027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001580000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GATGA..............................................................................................................................................................................................................................................................................................................................................................................................21208.201640000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000004000000000606000000000000000000000000000000000000000000000001040000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GATG...............................................................................................................................................................................................................................................................................................................................................................................................20206.401280000000000000000000000000000000021000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000960000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GA.................................................................................................................................................................................................................................................................................................................................................................................................18205.1010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000098000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000020000000000000000000000000000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GATGAT.............................................................................................................................................................................................................................................................................................................................................................................................22203.95790000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000002000000000000000000000000000000000000000000000000014000000000000000000000019002860000040000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000001000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GATGATGC...........................................................................................................................................................................................................................................................................................................................................................................................24173.065200000000000000000000000000000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000610191002030200010100002000000000000000000000000000000000011000000000000000000000000403000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................................................................TGAT---GATGAT---------GAT---------------------------------GATGATGC...........................................................................................................................................................................................................................................................................................................................................................................................21203.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000601300000040300005000001000000000000000000000000000000000000000000000000000000000000305000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................TGAT---GATGAT---------GAT---------------------------------GATGATGCA..........................................................................................................................................................................................................................................................................................................................................................................................2262.67160000000000000000000000000000010000400000000000000000000000000000000000000000000000000000000000000000000000000000000000040002000300000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATGAT---GATGAT---------GAT---------------------------------GATGA..............................................................................................................................................................................................................................................................................................................................................................................................19202.505000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGAT---GATGAT---------GAT---------------------------------GATGAT.............................................................................................................................................................................................................................................................................................................................................................................................19201.803600000000000000000000000000000020000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000002600000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000
.......................................................................AT---GATGAT---------GAT---------------------------------GATGATG............................................................................................................................................................................................................................................................................................................................................................................................18201.753500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002870000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GATGATGCA..........................................................................................................................................................................................................................................................................................................................................................................................2531.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GATGAT---GATGAT---------GAT---------------------------------GATGA..............................................................................................................................................................................................................................................................................................................................................................................................20201.402800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000010000000000000000000000000000000000000000000000020170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................ATGAT---GATGAT---------GAT---------------------------------GATG...............................................................................................................................................................................................................................................................................................................................................................................................18201.402800000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------GATGATG............................................................................................................................................................................................................................................................................................................................................................................................24201.352700000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000100000000000000000000000000000000000000000010000000000000000000000071500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GAT................................................................................................................................................................................................................................................................................................................................................................................................19201.302600000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000400003000000000000000050000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------GAT................................................................................................................................................................................................................................................................................................................................................................................................20201.152300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000010100000000000000001000000000
.CGATG-------------ACG----ATGGGAATGCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATTCGCCCATTTG------------------------------------------------GCC----------G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................AT---------GAT---------------------------------GATGATGCAGTTCGCC...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................18200.901800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................T---GATAATGATGAT---GATGAT---------GAT---------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................2390.8980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002010000000010001000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------GATGAT.............................................................................................................................................................................................................................................................................................................................................................................................23200.65130000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000010000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................AT---GATGAT---------GAT---------------------------------GATGATGC...........................................................................................................................................................................................................................................................................................................................................................................................19200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000002000000000000000000000000000000000000000000000000000000000000000000005100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................T---GATAATGATGAT---GATGAT---------GAT---------------------------------GA.................................................................................................................................................................................................................................................................................................................................................................................................2470.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGATGAT---GATGAT---------GAT---------------------------------GATGATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGAT---GATGAT---------GAT---------------------------------GATGATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................T---GATAATGATGAT---GATGAT---------GA.....................................................................................................................................................................................................................................................................................................................................................................................................................................21130.4660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000100000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATGAT---GATGAT---------GAT---------------------------------GATGATG............................................................................................................................................................................................................................................................................................................................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAATGATGAT---GATGAT---------GAT---------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................20200.4590000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000010000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................T---GATGAT---------GAT---------------------------------GATGATGCA..........................................................................................................................................................................................................................................................................................................................................................................................19120.4250000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GATGAT---GATGAT---------GAT---------------------------------GA.................................................................................................................................................................................................................................................................................................................................................................................................17200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAATGATGAT---GATGAT---------GAT---------------------------------GA.................................................................................................................................................................................................................................................................................................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000201000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------GATGATGCA..........................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................T---GATAATGATGAT---GATGAT---------G......................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001010000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................T---GATGAT---------GAT---------------------------------GATGATGC...........................................................................................................................................................................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGATG-------------ACG----ATGGGAATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................GATGAT---GATGAT---------GAT---------------------------------GATGAT.............................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAATGATGAT---GATGAT---------GAT---------------------------------GATGAT.............................................................................................................................................................................................................................................................................................................................................................................................25100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------GATGATGC...........................................................................................................................................................................................................................................................................................................................................................................................25110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATGAT---GATGAT---------GAT---------------------------------GATGATGCA..........................................................................................................................................................................................................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GAT---GATGAT---------GAT---------------------------------GATGATG............................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GAT---GATGAT---------GAT---------------------------------GATGATGC...........................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................T---GATAATGATGAT---GATGAT---------GAT---------------------------------GATG...............................................................................................................................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GATAATGATGAT---GATGAT---------GAT---------------------------------GATGA..............................................................................................................................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAATGATGAT---GATGAT---------GAT---------------------------------GATGATG............................................................................................................................................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATGAT---GATGAT---------GAT---------------------------------GATGATGC...........................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ATAATGATGAT---GATGAT---------GA.....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATGAT---GATGAT---------GAT---------------------------------GATGAT.............................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGATGAT---GATGAT---------GAT---------------------------------GATG...............................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AT---GATAATGATGAT---GATGAT---------GA.....................................................................................................................................................................................................................................................................................................................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAATGATGAT---GATGAT---------GAT---------------------------------GATGA..............................................................................................................................................................................................................................................................................................................................................................................................24120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GATAATGATGAT---GATGAT---------GAT---------------------------------...................................................................................................................................................................................................................................................................................................................................................................................................21130.0810000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ATAATGATGAT---GATGAT---------GAT---------------------------------GAT................................................................................................................................................................................................................................................................................................................................................................................................23130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GATGAT---------GAT---------------------------------GATGATGCA..........................................................................................................................................................................................................................................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAATGATGAT---GATGAT---------GAT---------------------------------GATG...............................................................................................................................................................................................................................................................................................................................................................................................23150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TAATGATGAT---GATGAT---------GAT---------------------------------GAT................................................................................................................................................................................................................................................................................................................................................................................................22190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATGATGAT---GATGAT---------GAT---------------------------------GATGAT.............................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................GATAATGATGAT---GATGAT---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATGATGAT---GATGAT---------GAT---------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATGATGAT---GATGAT---------GAT---------------------------------GA.................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AT---GATAATGATGAT---GATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................T---GATAATGATGAT---GATGAT---------.......................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATGATGAT---GATGAT---------GAT---------------------------------GATGA..............................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AATGATGAT---GATGAT---------GAT---------------------------------GATG...............................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCGACAGGTATCCAAGTCT-------GTC---T-GGGGCAAAAAAGCATGGTGCGGGT---GGCCAAGAACATAAAGATGACACATAA---AATCCTTAGAAGCACTATCGTTAAATAACACATGGTGTGAACAGGG--------------CCCACCTATCGTATAAATTT-----CCACACATCACAAACTTTTTGACATTTCAC------------------------------------------------CT-----------ACCATT-------TTCGTGCTAATCTAACTAAGCTGAGTCATTTT-----TCGTTATA-------------------------------------------------------------------------AGATCATTTAGAAAATGAAAATTCCCGCTGA--------TATCAGTAATCGTT---C-AATCGCAGGTCTCTCCAAACGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAACGACCGCTGGGCCC.........................1911.00110000000000000000
.................................................................................................................................................................................................................................................................................................................TCATTTT-----TCGTTATA-------------------------------------------------------------------------AGATCAT.............................................................................................................2211.00100001000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAACGACCGCTGGGC...........................1811.00110000000000000000
droSec2
TTGATA-------------ATT----ACCATGACAATGATGATGATGA--ATGATGAC---GATAACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGATGTCGATGATAAT---GATGATGATGATGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCAGGTCTCTCCAAACGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAGGTCTCTCCAAGCGACCGCTGGGCCCGCCGCATCGTAAAAGCAGTCTACCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:52 PM