dwi_3588

exon [dwil_GLEANR_8072:2]; CDS [Dwil\GK24056-cds]; intron [Dwil\GK24056-in]; Antisense to intron [Dwil\GK24068-in]

Name	Class	Family	Strand
BEL-14_DWil-LTR	LTR	Pao	-

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CAATTGTAGCTACATCGGGTGTGCATCGCTGTGTCTTTGGCCCCCATCTCTACCTTTGTATTCTCACTCCGATGTCCACCTAATTTATGTGTTGGTTGGGACAACCTTTAGTCACTGGTTTATGTGCTAGTGCCTATTTACATATATAAACAAATAAACATTAAATAAATTCAAGAAATACTAATGTCTTTCATTGACCAGCAATATTGCCGGGGTCTCATCGTACCTGTACGAGGTGATATGGAGCTTAT ************************************************....(((((((...........(((((..(((((......)))))...))))).....(((.(((((((......))))))).))).......)))))))....................((((((((.((....)).)))).))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M045 female body	V118 embryo	M020 head
................................................................................................................................................................................................................................ACCTGTACGAGGTGATATGGAGC....	23	0	6	0.33	2	2	0	0
.............................................................................................................................................................................................................................CGTACCTGTACGAGGTGATATGGAGC....	26	0	6	0.33	2	2	0	0
.............................................................................................................................................................................................................................CGTACCTGTACGAGGTGATATGGAG.....	25	0	6	0.33	2	2	0	0
............................................................................................................................................................................................................................TCGTACCTGTACGAGGTGATATGGAG.....	26	0	6	0.17	1	0	1	0
.............................................................................................................................................................................................................................CGTACCTGTACGAGGTGATATGG.......	23	0	6	0.17	1	1	0	0
...............................................................................................................................................................................................................................TACCTGTACGAGGTGATATGGAGCTT..	26	0	6	0.17	1	1	0	0
.............................................................................................................................................................................................................................CGTACCTGTACGAGGTGATATG........	22	0	6	0.17	1	1	0	0
..............TCGGGTGTGCATCGCTGTGTCTT......................................................................................................................................................................................................................	23	0	20	0.15	3	3	0	0
.................................................................................................................................................................................................................................CTTGCACGAGGTGATATGGAC.....	21	3	9	0.11	1	0	0	1
......................................................................................................................................................................................TATGCCCTTCATTGACCAGC.................................................	20	3	10	0.10	1	1	0	0
.........................................................................................................................................................................................................CAAGATTGCCGGTGTCTCC...............................	19	3	12	0.08	1	1	0	0
...............CGGGTGTGCATCGCTGTGTCTTTG....................................................................................................................................................................................................................	24	0	20	0.05	1	1	0	0
...........ACAACGAGTGTGCATCGCTGTGTCT.......................................................................................................................................................................................................................	25	2	20	0.05	1	1	0	0
...................TGTGCATCGCTGTGTCTTTGGCCCCCA.............................................................................................................................................................................................................	27	0	20	0.05	1	1	0	0
...........ACATCGGGTGTGCATCGCTGTG..........................................................................................................................................................................................................................	22	0	20	0.05	1	1	0	0

GTTAACATCGATGTAGCCCACACGTAGCGACACAGAAACCGGGGGTAGAGATGGAAACATAAGAGTGAGGCTACAGGTGGATTAAATACACAACCAACCCTGTTGGAAATCAGTGACCAAATACACGATCACGGATAAATGTATATATTTGTTTATTTGTAATTTATTTAAGTTCTTTATGATTACAGAAAGTAACTGGTCGTTATAACGGCCCCAGAGTAGCATGGACATGCTCCACTATACCTCGAATA ************************************************....(((((((...........(((((..(((((......)))))...))))).....(((.(((((((......))))))).))).......)))))))....................((((((((.((....)).)))).))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M045 female body	V118 embryo	V117 male body	V119 head
..................................GAAACCGGGGGTAGAGATGGAAACAT...............................................................................................................................................................................................	26	0	20	1.95	39	39	0	0	0
.................................AGAAACCGGGGGTAGAGATGGAAACAT...............................................................................................................................................................................................	27	0	20	0.80	16	16	0	0	0
.........................................GGGGTAGAGATGGAAACATAAGAGT.........................................................................................................................................................................................	25	0	3	0.67	2	1	1	0	0
........................................................................................................................................................................................................CGATATGACGGCCCCAGA.................................	18	2	3	0.67	2	2	0	0	0
.......................................................AACATAAGAGTGAGGATA..................................................................................................................................................................................	18	1	2	0.50	1	1	0	0	0
............................................................................................................................................................................................................................AGCATGGACATGCTCCACTATACCT......	25	0	6	0.50	3	3	0	0	0
............................................................................................................................................................TTGTAATTTATTTAAGTTCTTTATGAT....................................................................	27	0	9	0.44	4	4	0	0	0
...................................AAACCGGGGGTAGAGATGGAAACAT...............................................................................................................................................................................................	25	0	20	0.35	7	0	7	0	0
.................................................................................................................................................................................................................GGCCCCAGAGTAGCATGGACATGCTCCA..............	28	0	3	0.33	1	1	0	0	0
..........................................GGGTAGAGATGGAAACATAAGAGT.........................................................................................................................................................................................	24	0	3	0.33	1	0	1	0	0
............GTAGCCCACACGTAGCGACACAGAAAC....................................................................................................................................................................................................................	27	0	20	0.30	6	0	6	0	0
..........................GCGACACAGAAACCGGGGGTAGAGAT.......................................................................................................................................................................................................	26	0	20	0.20	4	0	4	0	0
..........................................................................................................................ACACGATCACGGATAAATGTATAT.........................................................................................................	24	0	20	0.20	4	4	0	0	0
......................................CCGGGGGTAGAGATGGAAACATA..............................................................................................................................................................................................	23	0	5	0.20	1	0	0	1	0
..TAACATCGATGTAGCCCACACGTAGC...............................................................................................................................................................................................................................	26	0	20	0.20	4	4	0	0	0
........................................................................................................................................................TTATTTGTAATTTATTTAAGTTCTT..........................................................................	25	0	11	0.18	2	2	0	0	0
.....................................................................................................GTTGGAAATCAGTGACCAAATACA..............................................................................................................................	24	0	20	0.15	3	0	3	0	0
...............................ACAGAAACCGGGGGTAGAGAT.......................................................................................................................................................................................................	21	0	20	0.15	3	3	0	0	0
.........................AGCGACACAGAAACCGGGGGTAGAGA........................................................................................................................................................................................................	26	0	20	0.15	3	3	0	0	0
.....................................................................................................GTTGGAAATCAGTGACCAAATACAC.............................................................................................................................	25	0	20	0.10	2	1	1	0	0
..........................................................................................................................ACACGATCACGGATAAATGTATA..........................................................................................................	23	0	20	0.10	2	2	0	0	0
....................CACGTAGCGACACAGAAACCGGGGGTA............................................................................................................................................................................................................	27	0	20	0.05	1	0	1	0	0
.TTAACATCGATGTAGCCCACACGT..................................................................................................................................................................................................................................	24	0	20	0.05	1	1	0	0	0
........................TAGCGACACAGAAACCGGGGGTAGAGAT.......................................................................................................................................................................................................	28	0	20	0.05	1	1	0	0	0
......................................................................................................................CAATACACGATCACGGATAAATGT.............................................................................................................	24	1	20	0.05	1	1	0	0	0
........................TAGCGACACAGAAACCGGGGGTAGA..........................................................................................................................................................................................................	25	0	20	0.05	1	0	1	0	0
..........................................................................................................................ACACGATCACGGATAAATGT.............................................................................................................	20	0	20	0.05	1	1	0	0	0
..............................CACAGAAACCGGGGGTAGAGA........................................................................................................................................................................................................	21	0	20	0.05	1	1	0	0	0
..................CACACGTAGCGACACAGAAAC....................................................................................................................................................................................................................	21	0	20	0.05	1	1	0	0	0
........CGATGTAGCCCACGCGTAGCGACACA.........................................................................................................................................................................................................................	26	1	20	0.05	1	1	0	0	0
.............TAGCCCACACGTAGCGACACAGAAAC....................................................................................................................................................................................................................	26	0	20	0.05	1	0	1	0	0
...........................................................................................................................CACGATCACGGATAAATGTAT...........................................................................................................	21	0	20	0.05	1	1	0	0	0
........................................TGGGGTAGAGATGGAAACAT...............................................................................................................................................................................................	20	1	20	0.05	1	0	0	0	1
.............TTGCTCACACGTAGCGACAC..........................................................................................................................................................................................................................	20	2	20	0.05	1	1	0	0	0
..........................................................................................................................ACACGATCACTGATAAATGTATA..........................................................................................................	23	1	20	0.05	1	1	0	0	0
.....................................ACCGGGGGTAGAGATGGAAACA................................................................................................................................................................................................	22	0	20	0.05	1	1	0	0	0
........CGATGTAGCCCACGCGTAGCGACAC..........................................................................................................................................................................................................................	25	1	20	0.05	1	0	1	0	0
...........TGTAGCCCACACGTAGCGACACAGAAA.....................................................................................................................................................................................................................	27	0	20	0.05	1	1	0	0	0
.....CATCGATGTAGCCCACACGT..................................................................................................................................................................................................................................	20	0	20	0.05	1	0	1	0	0
.........................AGCGACACAGAAACCGGGGGTAGAG.........................................................................................................................................................................................................	25	0	20	0.05	1	0	1	0	0
........................................................................................................GGAAATCAGTGACCAAATACACGAT..........................................................................................................................	25	0	20	0.05	1	1	0	0	0
................CCCACACGTAGCGACACAGAA......................................................................................................................................................................................................................	21	0	20	0.05	1	1	0	0	0

Species	Coordinate	ID	Alignment
droWil2	scf2_1100000004947:641030-641280 -	dwi_3588	CAATTGTAGCTACATCGGGTGTGCATCGCTGTGTCTTTGGCCCCCATCTCT----------------ACCTTTGTATT------CTCA-CTCCGA-TGTCCACCTAATT-TATGTGTTGGTTGGGACAACCT-TTAGTCACTGGTTTATGTGCTAGTGCCTA-TTTACATATATAAACAAATAAACATTAAATAAATTCAAGAA----ATACTAATGTCTTTCATTGACCAGCAATATTGCCGGGGTCTCATCGTACCTGTACGAGGTGATATGGAGCTTAT
droVir3	scaffold_8507:129-237 +		ACACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACACAAAAACGCCTTTAACACAGCCAGGT-----GGGACAAAATTTTGGATGCATTGTCGACGTTC--CGCGTGACATATTATCTTCAGGAGACGATACGCAGCTACT
droMoj3	scaffold_5865:134-267 -		TACTTGAAAATAG-----------ATCAACGAGTCT--------CGTCTTT---------------CACCATTTGATA------CTCATCTCCGT-TGTCCAACTGGTT-CAAGTACTTGTTGCGACGCCC--GTAGTCACT-GGTTCTGTACTAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------TAAACACAAATA
droGri2	scaffold_8260:453-550 -		TCGCT------------------------------------------------------------------------------------CTCCGTAAGTCCAACTAGTTACAAGTGCTAGTTGCGACGCCTT-TTAGTAGTCAGTTTATGTGCTGACTGCTTCCCTTCAAA---------------------------------------------------------------------------------------------------TATACACAAACA
dp5	XL_group1e:906473-906501 +		GTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAGCAGACGGGACAAAGCTACT
droPer2	scaffold_7159:454-616 +		CATCAGGGGCT-------------GTCGCCGTGTCTTCAGA-------------TCCTCCCTTGCGCACCGTAGGATA------CCCA-CTCCGC-AGTCCAACTGGTT-CAAGTTCTAGTTGCGACGCCCAAACTGTAGACGGTTTATGTACCGAATGCAACCC------------------AGCTTCCTACACAC------------------------------------------------------------------ACACATACACACATTAACA
droAna3	scaffold_9655:4697-4752 +		AGCCATA--------------------------TTCTTGG-----------------------------------------------------------------------------------------------------------------------------------------CA---------------------------------------------------------------GGAACCCCGGTATACCTGCAGCGGATAATATCCAGCTACC
droBip1	scf7180000393098:5592-5627 +		GGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGGCGTACCTGTTGAAGATGGTG---GACTACT
droKik1	scf7180000299898:1020-1047 -		TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGGAGATGGTGAGAAGTTTCT
droEle1	scf7180000490987:66127-66296 -		CGAGT---------------GAGCATCGCTGTGTCTTTGGCCCTCA----------------T--------------ATGCATGATTTTCTCCG--AGTTAAACCAATT-CAAGTGTTGGTTTAG-CGTCCT-ACTGTCACTAGATTATGTTCTAGGGGCAACC--ACATATATAAATAGTAAAAAATC-AATAAACCTACA-A----ACACCAAT----TTTATC-------------------------------------------------GACT-AG
droRho1	scf7180000764964:12524-12691 -		CGAGT---------------GAGCATCGCTGTGTCTTTGGCCCTCA----------------T--------------ACGCATGATCC-CTCCG--AGTTAAACCAATT-TAAGTGTTGGTTTAGC-AACCT-ATCGTCTCTAGAGTATGTTCTAGGGGCAACCA--TTCCTATAAATAATAAAAAAT-----AAAACTACA-AACAAGTACCATAACCTTC-------------------------------------------------------CTTTG
droTak1	scf7180000414490:23606-23734 +		GCTGT---------------------CGCTCT------------AGTCTTCAGATCC----------------TCATATG------CA-ATCCTT-AGTCCAACTGGTT-CAAGTTCTAGTTGCGACGACTT-TAGGCAGACAGTTTATGTACTGTACGCCAGGC-ATCTAAG---------------------------------------------------------------------------------------------CCAAGCAATAAACATT
droEug1	scf7180000409779:34785-34834 +		AATAT------------------------------------------------------------------------------------CTC-----------------------------------------------------------------------CTTATATATATAAATAATTA-----------------------------------------------------------------------------AAGGAAAAATAAATTAATTAAA
dm3	chrU:2551362-2551402 -		CAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTAGTCAGGATCATCCGCAGCTTTT
droSim2	2r:1418023-1418063 -		CGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCCAGCCTACCTAGTCAGGATTATTCGCAGCTACT
droSec2	scaffold_7912:1522-1584 -		ATCCTAGAAGC-------------ATTAATGGGCTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGTCCCAGCCTACCTAGTCAGGATCATCCGCAGCTA-T
droYak3	v2_chrUn_6728:27852-27900 +		ACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAACAAAAAAGCATTATACAAAATCAACA-----ATAAAA--------------------------------------------------------------ATGTTT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droWil2

CAATTGTAGCTACATCGGGTGTGCATCGCTGTGTCTTTGGCCCCCATCTCT----------------ACCTTTGTATT------CTCA-CTCCGA-TGTCCACCTAATT-TATGTGTTGGTTGGGACAACCT-TTAGTCACTGGTTTATGTGCTAGTGCCTA-TTTACATATATAAACAAATAAACATTAAATAAATTCAAGAA----ATACTAATGTCTTTCATTGACCAGCAATATTGCCGGGGTCTCATCGTACCTGTACGAGGTGATATGGAGCTTAT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...............................................................................................................................................................................................................................................................ACCTGTACGAGGTGATATGGAGC....	23	6	0.33	2	0	2	0	0	0
............................................................................................................................................................................................................................................................CGTACCTGTACGAGGTGATATGGAGC....	26	6	0.33	2	0	2	0	0	0
............................................................................................................................................................................................................................................................CGTACCTGTACGAGGTGATATGGAG.....	25	6	0.33	2	0	2	0	0	0
...........................................................................................................................................................................................................................................................TCGTACCTGTACGAGGTGATATGGAG.....	26	6	0.17	1	0	0	0	1	0
............................................................................................................................................................................................................................................................CGTACCTGTACGAGGTGATATGG.......	23	6	0.17	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................TACCTGTACGAGGTGATATGGAGCTT..	26	6	0.17	1	0	1	0	0	0
............................................................................................................................................................................................................................................................CGTACCTGTACGAGGTGATATG........	22	6	0.17	1	0	1	0	0	0
..............TCGGGTGTGCATCGCTGTGTCTT.....................................................................................................................................................................................................................................................	23	20	0.15	3	0	3	0	0	0
...............CGGGTGTGCATCGCTGTGTCTTTG...................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
...................TGTGCATCGCTGTGTCTTTGGCCCCCA............................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
...........ACATCGGGTGTGCATCGCTGTG.........................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0

droVir3

ACACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACACAAAAACGCCTTTAACACAGCCAGGT-----GGGACAAAATTTTGGATGCATTGTCGACGTTC--CGCGTGACATATTATCTTCAGGAGACGATACGCAGCTACT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTAC.	24	20	11.25	225	0	0	0	0	12	0	8	0	62	0	4	2	2	1	0	0	0	0	0	0	0	0	0	17	5	26	6	4	0	0	0	0	5	0	15	8	3	5	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGC....	21	20	9.05	181	0	0	2	0	10	1	13	1	13	0	1	10	11	12	0	0	0	0	0	0	0	0	0	17	0	18	4	2	0	4	0	0	8	1	23	9	0	5	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTA..	23	20	4.35	87	0	0	0	0	0	0	8	0	8	0	0	1	0	1	0	0	0	0	0	0	0	0	0	10	0	14	4	3	0	0	0	0	6	0	13	1	0	11	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCT...	22	20	2.55	51	0	0	0	0	3	0	1	0	2	0	0	2	15	8	0	0	0	0	0	0	0	0	0	4	0	6	2	0	0	0	0	0	2	0	2	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTT..	23	20	1.95	39	0	0	0	0	0	0	0	0	12	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	1	4	3	2	0	0	1	0	4	0	3	1	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTACT	25	20	1.60	32	0	0	0	0	2	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	6	2	5	4	0	0	0	0	0	0	0	0	2	1	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................TTTGGATGCATTGTCGACGTTC--........................................	22	7	1.00	7	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................TTTGGATGCATTGTCGACGTTC--C.......................................	23	7	0.71	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCA......	19	20	0.60	12	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAG.....	20	20	0.50	10	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................TGCATTGTCGACGTTC--CGCGTGA.................................	23	7	0.43	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................T-----GGGACAAAATTTTGGATGCATTG...................................................	24	12	0.33	4	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................TGCATTGTCGACGTTC--CGCGTGACA...............................	25	7	0.29	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGACA....................................................................	23	20	0.25	5	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TATTATCTTCAGGAGACGATACGCAGC....	27	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTTT.	24	20	0.25	5	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGAC.....................................................................	22	20	0.25	5	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGACAAAA.................................................................	26	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGC.......	18	20	0.20	4	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................TCTTCAGGAGACGATACGCAGCTAC.	25	20	0.20	4	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGA......................................................................	21	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTAA.	24	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTAT.	24	20	0.15	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTC..	23	20	0.15	3	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAA.....	20	20	0.15	3	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................TTTGGATGCATTGTCGACGTTC--CGC.....................................	25	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................TTTGGATGCATTGTCGACGT............................................	20	7	0.14	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCGACGTTC--CGCGTGACATATTATC........................	25	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................ATTTTGGATGCATTGTCGACGTTC--........................................	24	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................TTTGGATGCATTGTCGACGTA...........................................	21	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................TGCATTGTCGACGTTC--CGCGTGAC................................	24	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................TGCATTGTCGACGTTC--CGCGTGACC...............................	25	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GCCAGGT-----GGGACAAAATTTTGG...........................................................	22	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................CCAGGT-----GGGACAAAATTTTGGATGC.......................................................	25	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ATCTTCAGGAGACGATACGCAGCTACT	27	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TATCTTCAGGAGACGATACGCAGCTAC.	27	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGACAAAAT................................................................	27	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAC.....	20	20	0.10	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ATCTTCAGGAGACGATACGCAGC....	23	20	0.10	2	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTTG.	24	20	0.10	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TATCTTCAGGAGACGATACG........	20	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTTA.	24	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ATCTTCAGGAGACGATACGCA......	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTTTC	25	20	0.10	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ATCTTCAGGAGACGATACGCAGCTAC.	26	20	0.10	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TATTATCTTCAGGAGACGATAC.........	22	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGACAAA..................................................................	25	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................AACGCCTTTAACACAGCCAGGT-----GGGAC.....................................................................	27	20	0.10	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ATCTTCAGGAGACGATACGC.......	20	20	0.10	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................T-----GGGACAAAATTTTGGATGCATTGTC.................................................	26	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................T-----GGGACAAAATTTTGGATGCATT....................................................	23	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................ATATTATCTTCAGGAGACGATAC.........	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGA.......	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ATCTTCAGGAGACGATACGCAGCTA..	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ATCTTCAGGAGACGATACGCAG.....	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGACAAAAA................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CAGCCAGGT-----GGGACAAAAT................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................TTTAACACAGCCAGGT-----GGGAC.....................................................................	21	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTATCTTCAGGAGACGATACGCA......	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TTCAGGAGACGATACGCAGC....	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................ATCTTCAGGAGACGATACG........	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TATCTTCAGGAGACGATACGCAGC....	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................ATATTATCTTCAGGAGACGAT...........	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TATCTTCAGGAGACGATACGCAGCT...	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................TCTTCAGGAGACGATACGCAG.....	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................TTTAACACAGCCAGGT-----GGGACAAAA.................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................AACGCCTTTAACACAGCCAG.................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TATCTTCAGGAGACGATACGCAG.....	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TTCAGGAGACGATACGCAGCTAC.	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................ACGCCTTTAACACAGCCAGGT-----GGGA......................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................TCTTCAGGAGACGATACGCAGC....	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTCT.	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TATTATCTTCAGGAGACGATA..........	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................ATATTATCTTCAGGAGACGATA..........	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTCTG	25	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................CAGGAGACGATACGCAGC....	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTATCTTCAGGAGACGATAC.........	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGAA.....................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTATCTTCAGGAGACGATACGCAGCT...	26	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................AACGCCTTTAACACAGCCAGGT-----GGGA......................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................AACGCCTTTAACACAGCCAGGT-----GGGACA....................................................................	28	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAT.....	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................TCTTCAGGAGACGATACGCAGCT...	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CTTCAGGAGACGATACGCAGCTATG	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACAGCCAGGT-----GGGACAAAAT................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................AAACGCCTTTAACACAGCCAGG................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................GGAGACGATACGCAGCTAC.	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTAACACAGCCAGGT-----GGGACAA...................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................CGCCTTTAACACAGCCAGG................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TACTTGAAAATAG-----------ATCAACGAGTCT--------CGTCTTT---------------CACCATTTGATA------CTCATCTCCGT-TGTCCAACTGGTT-CAAGTACTTGTTGCGACGCCC--GTAGTCACT-GGTTCTGTACTAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------TAAACACAAATA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
........................................................................TTGATA------CTCATCTCCGT-TGTCCAACTGG...............................................................................................................................................................................	28	20	5.20	104	104	0	0	0	0	0
........................................................................TTGATA------CTCATCTCCGT-TGTCCAAC..................................................................................................................................................................................	25	20	1.45	29	29	0	0	0	0	0
........................................................................TTGATA------CTCATCTCCGT-TGTCC.....................................................................................................................................................................................	22	20	1.00	20	14	0	0	0	6	0
........................................................................TTGATA------CTCATCTCCGT-TGTCCAACTG................................................................................................................................................................................	27	20	0.75	15	14	0	0	0	1	0
........................................................................TTGATA------CTCATCTCCGT-TGTCCAA...................................................................................................................................................................................	24	20	0.50	10	9	0	0	0	1	0
.........................................................................TGATA------CTCATCTCCGT-TGTCCAACTGG...............................................................................................................................................................................	27	20	0.45	9	9	0	0	0	0	0
...........................................................................................................TT-CAAGTACTTGTTGCGACGCCC--GTAG.................................................................................................................................................	27	20	0.20	4	4	0	0	0	0	0
.........................................................................TGATA------CTCATCTCCGT-TGTCCA....................................................................................................................................................................................	22	20	0.20	4	4	0	0	0	0	0
........................................................................TTGATA------CTCATCTCCGT-TGTCCAACTGGT..............................................................................................................................................................................	29	20	0.15	3	3	0	0	0	0	0
.........................................................................TGATA------CTCATCTCCGT-TGTCC.....................................................................................................................................................................................	21	20	0.15	3	3	0	0	0	0	0
.................................................................................................................................................TTCTGTACTAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------TA..........	24	20	0.10	2	2	0	0	0	0	0
.................................................................................................................................................TTCTGTACTAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------T...........	23	20	0.10	2	2	0	0	0	0	0
........................................................................TTGATA------CTCATCTCCGT-TGTC......................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	2	0
........................................................................TTGATA------CTCATCTCCGT-TGTCCA....................................................................................................................................................................................	23	20	0.10	2	0	0	0	0	2	0
.................................................................................................................................................TTCTGTACTAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------TAAACA......	28	19	0.05	1	0	0	0	0	1	0
..................................................................................................................................................TCTGTACTAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------TAT.........	24	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................TTCTGTACTAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------TAAAC.......	27	20	0.05	1	0	0	0	0	1	0
..................................................................................................TCCAACTGGTT-CAAGTACTTGT.................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................TAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------TAAACAC.....	21	20	0.05	1	1	0	0	0	0	0
........................................................................TTGATA------CTCATCTCCGT-TGTCCAACTGGA..............................................................................................................................................................................	29	20	0.05	1	1	0	0	0	0	0
........................................................................TTGATA------CTCATCTCCGT-TGTCCATTA.................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
.....................................................................................TCATCTCCGT-TGTCCAACTGGTT-C...........................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0
.......................................................................TTTGATA------CTCATCTCCGT-TGTCCA....................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................TTCTGTACTAGAGGCTTA----...................................................................................................................	18	20	0.05	1	1	0	0	0	0	0
........................................................................................................TGGTT-CAAGTACTTGTTGCGA............................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
............................................................................................CGT-TGTCCAACTGGTT-CAAGTACTTG..................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
............................................................................................................T-CAAGTACTTGTTGCGACGCCC--GTAG.................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
..............................................................................................T-TGTCCAACTGGTT-CAAGTAC.....................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................TTCTGTACTAGAGGCTTA----CAAT---------------------------------------------------------------------------------------------------TAAA........	26	20	0.05	1	1	0	0	0	0	0
..........................................................................GATA------CTCATCTCCGT-TGTCCAACT.................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
......................................................................................CATCTCCGT-TGTCCAACTGG...............................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
......................................................................ATTTGATA------CTCATCTCCGT-TGTCCAT...................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0

droGri2

TCGCT------------------------------------------------------------------------------------CTCCGTAAGTCCAACTAGTTACAAGTGCTAGTTGCGACGCCTT-TTAGTAGTCAGTTTATGTGCTGACTGCTTCCCTTCAAA---------------------------------------------------------------------------------------------------TATACACAAACA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dp5

GTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTACAGCAGACGGGACAAAGCTACT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
......................................................................................................................................................................................................................................................................GCAGACGGGACAAAGCTACT	20	1	1.00	1	0	0	0	0	0	0	0	0	0	1

droPer2

CATCAGGGGCT-------------GTCGCCGTGTCTTCAGA-------------TCCTCCCTTGCGCACCGTAGGATA------CCCA-CTCCGC-AGTCCAACTGGTT-CAAGTTCTAGTTGCGACGCCCAAACTGTAGACGGTTTATGTACCGAATGCAACCC------------------AGCTTCCTACACAC------------------------------------------------------------------ACACATACACACATTAACA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
............................................................................................................T-CAAGTTCTAGTTGCGACG..........................................................................................................................................................	19	20	0.10	2	0	2	0	0	0	0
...........................................................................................................................................................................................TCCTACACAC------------------------------------------------------------------ACACATACACACA......	23	13	0.08	1	0	1	0	0	0	0
.............................CGTGTCTTCAGA-------------TCCTCCCTTGCGC.......................................................................................................................................................................................................................	25	17	0.06	1	0	1	0	0	0	0
...................................................................................................................................................................CC------------------AGCTTCCTACACAC------------------------------------------------------------------ACACAT.............	22	20	0.05	1	0	1	0	0	0	0

droAna3

AGCCATA--------------------------TTCTTGG-----------------------------------------------------------------------------------------------------------------------------------------CA---------------------------------------------------------------GGAACCCCGGTATACCTGCAGCGGATAATATCCAGCTACC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
............................................................................................................................................................................................................................................................TATACCTGCAGCGGATAATATCCAGC....	26	2	0.50	1	0	1	0	0	0	0
.....TA--------------------------TTCTTGG-----------------------------------------------------------------------------------------------------------------------------------------CA---------------------------------------------------------------GGAACCCCGGTATAC.........................	26	12	0.08	1	0	1	0	0	0	0
.....TA--------------------------TTCTTGG-----------------------------------------------------------------------------------------------------------------------------------------CA---------------------------------------------------------------GGAACCCCGGTA............................	23	13	0.08	1	1	0	0	0	0	0

droBip1

GGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGGCGTACCTGTTGAAGATGGTG---GACTACT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCTGGAGATGGTGAGAAGTTTCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CGAGT---------------GAGCATCGCTGTGTCTTTGGCCCTCA----------------T--------------ATGCATGATTTTCTCCG--AGTTAAACCAATT-CAAGTGTTGGTTTAG-CGTCCT-ACTGTCACTAGATTATGTTCTAGGGGCAACC--ACATATATAAATAGTAAAAAATC-AATAAACCTACA-A----ACACCAAT----TTTATC-------------------------------------------------GACT-AG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CGAGT---------------GAGCATCGCTGTGTCTTTGGCCCTCA----------------T--------------ACGCATGATCC-CTCCG--AGTTAAACCAATT-TAAGTGTTGGTTTAGC-AACCT-ATCGTCTCTAGAGTATGTTCTAGGGGCAACCA--TTCCTATAAATAATAAAAAAT-----AAAACTACA-AACAAGTACCATAACCTTC-------------------------------------------------------CTTTG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GCTGT---------------------CGCTCT------------AGTCTTCAGATCC----------------TCATATG------CA-ATCCTT-AGTCCAACTGGTT-CAAGTTCTAGTTGCGACGACTT-TAGGCAGACAGTTTATGTACTGTACGCCAGGC-ATCTAAG---------------------------------------------------------------------------------------------CCAAGCAATAAACATT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

AATAT------------------------------------------------------------------------------------CTC-----------------------------------------------------------------------CTTATATATATAAATAATTA-----------------------------------------------------------------------------AAGGAAAAATAAATTAATTAAA	Size	Hit Count	Total Norm	Total
No Reads

dm3

CAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTAGTCAGGATCATCCGCAGCTTTT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
CAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTAGT....................	21	12	4.42	53	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	1	9	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	1	1	0	1	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	10	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TACCTAGTCAGGATCATCCGCAGC....	24	7	4.14	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	1	2	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	4	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTAGTC...................	21	11	1.64	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TCCCAGCCTACCTAGTCAGGATCATC..........	26	7	1.57	11	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................CCAGCCTACCTAGTCAGGATCATCCGCA......	28	7	1.14	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTAG.....................	20	12	0.83	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTAGTCAG.................	23	11	0.73	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................AGCCTACCTAGTCAGGATCATCCGCA......	26	7	0.71	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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CAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTA......................	19	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.AGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTAGTA...................	21	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
CAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAGCCTACCTAGTCAA.................	24	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

CGGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGCCAGCCTACCTAGTCAGGATTATTCGCAGCTACT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
......................................................................................................................................................................................................................................................TGCCAGCCTACCTAGTCAGGATTAT...........	25	2	1.50	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TACCTAGTCAGGATTATTCGCAGC....	24	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TGCCAGCCTACCTAGTCAGGATTATTC.........	27	2	0.50	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................CCTACCTAGTCAGGATTATT..........	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................CTACCTAGTCAGGATTA............	17	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TACCTAGTCAGGATTATTCGCAGCTAC.	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................TGCCAGCCTACCTAGTCAGGATTA............	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................AGCCTACCTAGTCAGGATTATTCGC.......	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................GCCTACCTAGTCAGGAT..............	17	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

ATCCTAGAAGC-------------ATTAATGGGCTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCGTCCCAGCCTACCTAGTCAGGATCATCCGCAGCTA-T	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
......................................................................................................................................................................................................................................................TCCCAGCCTACCTAGTCAGGATCA............	24	20	0.20	4	4	0	0	0
..................................................................................................................................................................................................................................................AGCGTCCCAGCCTACCTAGTCAGGATCA............	28	20	0.10	2	2	0	0	0
.....................................................................................................................................................................................................................................................GTCCCAGCCTACCTAGTCAGGATCATC..........	27	20	0.10	2	2	0	0	0
..................................................................................................................................................................................................................................................AGCGTCCCAGCCTACCTAGTCAGGATA.............	27	20	0.10	2	2	0	0	0
.............................................................................................................................................................................................................................................................CTACCTAGTCAGGATCATCCGCAGCT...	26	20	0.05	1	1	0	0	0
........................................................................................................................................................................................................................................................CCAGCCTACCTAGTCAGGATCATCCGC.......	27	20	0.05	1	1	0	0	0

droYak3

ACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAACAAAAAAGCATTATACAAAATCAACA-----ATAAAA--------------------------------------------------------------ATGTTT

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

dwi_3588

scf2_1100000004947:641080-641230 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads