ID:

dwi_358

 Coordinate:

scf2_1100000004401:308885-309035 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-0.4 0.0 0.0

Flybase annnotation

exon [dwil_GLEANR_10243:2]; CDS [Dwil\GK10303-cds]; intron [Dwil\GK10303-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-
mature
  1. dwi_358  scf2_1100000004401:308978-308997 -
  2. scf2_1100000004513:4844920-4844939 -
star
  1. dwi_358  scf2_1100000004401:309002-309022 -
  2. scf2_1100000004511:7343487-7343507 -
  3. scf2_1100000004963:4158233-4158253 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################--
TTAGCATTGATGATTCTGGTTTCTGTGTGGTAGAACAGCAACAACAACACCAACAACAACAGCATCACCAACAACAACAACAGCAGCAGCAGCATCATCATCAACAACAACAATTGCAGCCTACTCCAAGGAAACTAAAGTTGTCTACTCAGGGAACTGGCCAAAATCAATTAACACATGATTCCTCTACACCACCATCAGCTTCAGCATCAGCATCAGCATTTCCTGTTGGCGGTGAAGATAATTTAGTT
***************************************************************...................((....))..................*********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body
.............................................................................................................................................................................................................................TTTCCTGCTGGCGGTGAAGG.......... 20 2 2 0.50 1 0 1 0
........................................................................................GCAGCATCATCATCAACAAC............................................................................................................................................... 20 0 2 0.50 1 1 0 0
...............................................................ATCACCAACAACAACAACAGC....................................................................................................................................................................... 21 0 3 0.33 1 1 0 0
..................................................................................................................................................................................................................................TGCGGTCGGTGAAGATAATTT.... 21 3 4 0.25 1 0 0 1
......................................................................................CAGCAGCATCATCATCAACA................................................................................................................................................. 20 0 5 0.20 1 1 0 0
....................................................................................AGCAGCAGCATCATCATCAAC.................................................................................................................................................. 21 0 5 0.20 1 1 0 0
............................................................AGCATCACCAACAACAACA............................................................................................................................................................................ 19 0 7 0.14 1 1 0 0
.......TGATGATTCTCGGTTCTGTT................................................................................................................................................................................................................................ 20 3 20 0.05 1 1 0 0
......................................................................ACAACAACAACAGCAGCAG.................................................................................................................................................................. 19 0 20 0.05 1 0 1 0
............................................................AGCAGCACCAACAACAACAACAGCAGC.................................................................................................................................................................... 27 1 20 0.05 1 1 0 0
......................................................................ACAACAACAACAGCAGCAGCAGCA............................................................................................................................................................. 24 0 20 0.05 1 1 0 0
....................................................ACAAGAACAGAATCACCAA.................................................................................................................................................................................... 19 2 20 0.05 1 1 0 0
........................................................................AACAACAACAGCAGCAGCAG............................................................................................................................................................... 20 0 20 0.05 1 0 0 1
..............................................................................AACAGCAGCAGCAGCATCAT......................................................................................................................................................... 20 0 20 0.05 1 0 0 1

Anti-sense strand reads

AATCGTAACTACTAAGACCAAAGACACACCATCTTGTCGTTGTTGTTGTGGTTGTTGTTGTCGTAGTGGTTGTTGTTGTTGTCGTCGTCGTCGTAGTAGTAGTTGTTGTTGTTAACGTCGGATGAGGTTCCTTTGATTTCAACAGATGAGTCCCTTGACCGGTTTTAGTTAATTGTGTACTAAGGAGATGTGGTGGTAGTCGAAGTCGTAGTCGTAGTCGTAAAGGACAACCGCCACTTCTATTAAATCAA
***********************************************************************************************************************************************...................((....))..................*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M020
head
 M045
female body
 V117
male body		 V119
head
.....................................................................................................................TCGGATGAGGTTCCTTTGATT................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................................GGTAAAGGACAACCGCCACTGCTT......... 24 3 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................CGGTTTTAGATACTTGTGTA........................................................................ 20 2 4 0.25 1 1 0 0 0 0
.......ACTACTAAGAGCCAAGACAAA............................................................................................................................................................................................................................... 21 3 9 0.22 2 2 0 0 0 0
......................................................TTGTTGTCGTATTGGTTGTAATTGTTG.......................................................................................................................................................................... 27 3 5 0.20 1 0 0 0 1 0
...............................................................................................................................................................CGGTTTTAGGGAATTGTGT......................................................................... 19 2 6 0.17 1 0 0 1 0 0
......................................................................................GTCGTCGTAGTAGTAGTTG.................................................................................................................................................. 19 0 6 0.17 1 1 0 0 0 0
...................................................................................................................................................................................CTAAGGTGATGTGGTGGTCT.................................................... 20 3 6 0.17 1 0 0 0 1 0
..............................................................................................................................................................................GTGTACGAAGGAAATGTGGG......................................................... 20 3 8 0.13 1 0 0 0 1 0
...............................................................CAGTGGTTGTTGTTGGTCTCGTC..................................................................................................................................................................... 23 3 9 0.11 1 0 0 1 0 0
.......................................................................................................................................................................................GGCAATGGGGTGGTAGTCGA................................................ 20 3 10 0.10 1 0 0 1 0 0
................................................................................GTCGTCGTCGTCGTAGTAG........................................................................................................................................................ 19 0 20 0.10 2 0 2 0 0 0
.......................................................................................................................................................................................GGAAATGGGGTGGTAGTC.................................................. 18 2 11 0.09 1 0 0 1 0 0
..............................................................................................AGTAGTAGTTGTTGTGGTT.......................................................................................................................................... 19 1 20 0.05 1 0 0 0 0 1
.............................................................................................TAGTAGTAGTTGTTGTTG............................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................GGTTTTAGGGAATTGTGT......................................................................... 18 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004401:308835-309085 - dwi_358 TTAGCATTGATGA-TTCTGGTTTCT--GTGT------G----GTAGA--ACAGCAACAAC------------AACACCAACAACAACAGCATCA------CCAAC---------AACAACAACAG---------C------------------AGCAGC---------------------------------------AGCATCATCATCAAC-------AACAACAATT---------------------GCAGCCTACTC------------------------CA-------------AGG------------------------------------------------------------------------------------------AAACTAAAGTTGTCTACTCAGGGA-----------ACT--GGC--------------------------------------------------------------CAAAATCAATTAACACATGATTCCTC-----------------------------------------------------------TACACCAC------------------CATCAGCTTCAG------CATC-------------------AGCA----------TCAGCA---TTTCCTGTTGGCGGTGA----------AGATAATTTAGTT
droVir3 scaffold_13049:1083817-1084027 - CCAGCATGGAGCA-TTCGGGCGTAGTGTTGCGTAAGGACAACA---A--AAAACAGCAAC---------AGCA------ACA------ACAACAACAACAACAA------------CAGCAGCAA---------C------------------AGCAGC---------------------------------------AACAGCAGCA-------------G--ACGGCG---------------------GCAAAATCGACTAAATCGCCCAAAAATGTACACTTAAAA---------------------------------------------------------------------------------------------------------------------------------------------AATGCT--------------------------------------------------------------CAACAGC------------------------------------------------------------------------------AGCAGCCAC------------AGGAACAACAACAACAACAACAACAAC-------------------AACA----------ACAGCG------------------------------------TCT----
droMoj3 scaffold_6328:1356113-1356369 + TTATCATTGATGA-CTCGCAGCT------G------GGCCTTA---T--GGAACAGCAGC---------AACA------ACA------GCAGCACCAGCAACAAC---------AGCAGAATCAG---------C------------------AGCAGC---------------------------------------AACAGCAA-------------------ACGTT---------------------GCCGCG----------------------------------------------T------------------------------------------------------------------------------------------AAATTAAAGTATATGAACTATGGG-----------CAA--AGCCAACATCAACAGACACAGAGACTAGCAACGCCCT--TTCCGTCGCCATCACCA-----------------------TCACAACATTTG---------------------------------------------------------------------------------------GAAATAGCAA------CAAATGGAAATCCAAACTTGAGCT--------------------------TCTCTGGCGGTGA----------TGATGATCTGTTT
droGri2 scaffold_15110:7065310-7065545 - TAA-CATTGAAGCTAACTAATTTCA--GTCA------G----CTCGA--GCAGCAACAGC------------AGCAGCAGCAACAACAACAGCA------ACAAC---------AACAACAGCAG---------C------------------AGCAGC---------------------------------------AGCAGCAGCAGCAGC-------AACAACAACA---------------------ACAGTGCG------------------------------------------AGGCAACAA------------------------------------------------------------------------------------------CAGC----TGC-AAGTCAACAGTTGGCAACAG---TTGT------GCAAACA----GAG---CGGCAG-----------------------------C-AAGAAGC-----AGCCACCACAACAGC----------------------------------------------------------AACAGCAAC------------------AGTAACCGCAA------CAGT-------------------AGCA----------ACAGCA-------------------------------------------
dp5 XR_group8:3321197-3321395 - TGAGCGTGGCATGCATCACGTTTCC--CTGG------GCT------A--TCAGGGACACCAGC------ATCAGCAACAACAACAACAGCAGCA------GCAGC---------AGCAACAACAA---------C------------------AGCAGC---------------------------------------AACAGCAACAACAAC-------AACAGCAGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGCGCCAG--TGCAACCGCCGCAG----TTTGATC-TAGAGGC-----AACC---------------------------GCCTTCC-------------------------------------CACCAC------------------TGC---CAGC-------------------------------CTCGTCG-------GCATCG---GTA-------------------------------------
droPer2 scaffold_13:40645-40842 + CAA-CAA-----------------------------CATTATC---A--TCAACAACAACAGCACCATC---A------ACAACAGCAACAACA------CCAACAGCATCATCATCATCAGCTA---------C------------------AACAGCAACTGCTGCTCCAGCAACAACAACAACAGCAGCAACAGCAACTGCAGCAGCAAC-------AGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACAACAGCAATTAC---AACAGCAGCAACAGCAA------CAGC-------------------A-------------GCAACA---ACAATTGCTAATG---------------------------
droAna3 scaffold_13337:17773556-17773759 + ----------------------------------------------ACAATGTCAACAGC------------AACAGCAGCA---ACAGCAACAACAGCAA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------AACGGCAACA-------------ACA----------G----GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCAGACTGGCGACGGCATATTCCCGTGGGGAGCTGCAT------TTAAAAGGCATTTAAGCCACAAAATCTCAAGCA---ACAGTAGCTGCAGCTC-------------------------------------------------------------------------------CACC-------------------A-------------CCAACA---ATTACTGCAACAAGGGG----------AGATCATTTAG--
droBip1 scf7180000395954:117728-117948 + ----------------------------------------------A--ACAGCCACACC------------TGCAACATCAGCAGCAGCAACA------GCAAC---------AACAACAACAA---------C------------------AGCAGC---------------------------------------AGCAGACACATCAAC-------AACATATGTT---------------------GCAACA----------------------------------------------TCCGCACACG---------------------------------------------------------------------------------CATTCGCT----TCCACACGGCC----------------------------------------------------------------------------------AACAGGCACTT---CCACATCCTCACACGCATCCACATCCACATCCACAT------------CC------------CCATCCGC-ATTCGCAC------------------------------------TCGC-------------------A-------------TCCACA---CCATCTGCAGCCAGGAA----------CACCCACTCGG--
droKik1 scf7180000302351:355049-355247 + ----------------------------------------------A--GCAGCAGCAAC------------ACTCCCAGCAGCAGCAACATCT------C---------------CAGCAGCAA---------C------------------AGCAGC---------------------------------------AACTGCAGCAGCAGCACAATGCAACATCCTTT---------------------GCCG----------------------------------------------GCGCCACAGCATTGCTGCATATTAAAACCGAGCAGAAT-----------------------------------------------------------------------------------------ACTT-----------------------------------------------------------------------T--GCTTACACCGCACCAACTG----------------------------------------------------------------------------------------CAGCAGCAA------CAAC-------------------AGCAGCAGCA-CAGCT--TA---CATGTTGCAGGAGGCGG----------CAA----------
droFic1 scf7180000453495:6261-6485 - CAG-CATTGGAGAAGGTTGA----------------------TGAGA--GCAGC----CC------AGCTACAGCAGCAACAACTGCAGCAGCA------GCAGC---------AGCAGCAACAT---------C------------------AGCAGC---------------------------------------AACAATAGCATCAAC-------CACTGCAACA---------------------GAAGCA---------------------GAACATTTAAGTATTACTAACCGTAGCAATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATAGCAAAATA---------A----TTAGAGTAGATCAGCTGGCAGAGGAG----GAGCCTGCAGCAC---------TATCTG------CTGCAGC--------CAGC-------------------AGCA----------GCAGCA-------------------------------------------
droEle1 scf7180000491000:550475-550697 - ----------------------------------------------A--ATGTCAACAGC------------AGCAGCAGCAGCAACTGCAACAACAGCAA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------AACTGCAACAACAGC-------AACAACAACA-ACAG----GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCAGACTGGCGACGGCGTATTCCCGTGGGGAGCTGCAT------TTAAAAGGCATTTAAGCCACAAAATCTCAAGCAGCCACAGTAGCTGCAGCTC-------------------------------------------------------------------------------CACC-------------------A-------------GCAACA---ATTACTGCAAGTAGGGG----------AGATCATTTAA--
droRho1 scf7180000777041:7307-7498 - ----------------------------------------------A--GCAGCAGCAAC------------AACAGCAGCAGCAACAGCAGCA------ACAAC---------AGCAGCAACAG---------C------------------AGCAGC---------------------------------------AACAACAGCAGCAAC-------AACAGCAGCA---------------------GCAGCA----------------------------------------------GCAACACCAA---------------------------------------------------------------------------------CAACCACA----GC----------------------------------------------------------------------------------------------------------------AACACTTGAAGTACCAGCAACTGCAATAT------------CA---------------AATGC-AGCAGCAATATGAATACC---------AGCAGCAGCAG---CACTACC-------------------A-------------GCAGCA---GTTCC-----------------------------------
droBia1 scf7180000298389:878275-878477 + ----------------------------------------------A--GCAGCAACAGC------------AACACCAGCAATACCAGCAGCA------GCAAC---------AACAGCAGCAG---------C------------------AGCAAC---------------------------------------ACCAACAGCAGCAGC-------AGACACAGTG---------------------GCAACATCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGACAGCGACAACAGGTGCAGCTGTGGAGATGCC---------AACAAGCGTGAAAGTAG------C-------------------------------------------------------------------TGAAGACACCGC---AGCAACATCAACATCAA------CGGC-------------------A-------------GCAACA---GTAATTGCCAGTGA----------------------AG--
droTak1 scf7180000415313:163869-164092 - GTGCC--------------------------------------------ACAGCAGCAGC------------AGCAGCAGCAGCGGCAGCAGCA------ACCAC---------AACAGTAACAA---------C------------------AGCAGC---------------------------------------AACAGCAACATCAAC-------CA---------AGAA----GCAGACATATCGGGA--A----------------------------------------------ACTGCAACAG---------------------------------------------------------------------------------CAACCACA----GTCACTAAGAGAACA---AGCAACAA-------------------------------------------------------------------------------AGCCAACATAGC---AGCAGCAACAGAAGCAACA------------------------------TTAAACGC-CTCC---------------------------AAAGCAG------CAGC-------------------A-------------GCAACA---GATGTTGCTGGTGGC-------------A-ATAGCAAT--
droEug1 scf7180000409524:879578-879804 + ----------------------------------------------A--ACAACAACAGC------------AGCAGCAGCAACAGCAGCAACA------GCAGC---------AGCAGCAACAG---------C------------------AGCAGC---------------------------------------AGCAGCAGCAACAGC-------AACAACAGTT---------------------GCAACT----------------------------------------------GCAGCAACAAAATGATATTTTATTA-CGAGAGGAGATCGATGATATAGACGCCTTTCTCAATCTGTCACCCCTGCAATCCTCCATAAATC--------------------------------------------------------------------------------------------------------------------------------------------------CCTTCAGCTC---------------------------------C-AGCAGCAAT------------------AACAACTATAA------TGGT-------------------GGCA----------GCA------------------------------------ACAATAAT--
dm3 chr2L:17437522-17437772 - CAG-CAG-----------------------------GTCCTTG---C--CCAGCAGCAGCAGCATCAGC---A------GCAGCAGCAACAGCA------CCAGC------------ATCAGCACCAG------CAGCAACACCAACAGCAGCAGCAGC---------------------------------------AGCAGCAGCAGCAAC-------AGC------A---------------------ACAGT--------------------------------------------------------------------------------------------------------------------CCTTGCAATTTCATGCCAATCCCTTTGGCA----ATCCT-------------G------------------------GCGGCAATAGCTGGGAAAGTAAATTCTCGGCGGCAGC--------------------------------------------------------------------------------------------------------------TGTTGC---AGCAGCGGCAGCAACTG------CGAC-------------------A-------------GGAGCAGCACCTGCCAACGGCAATAG----------CAATAATCT----
droSim2 3l:14857271-14857486 - ----------------------------------------------ACAATGTCAACAGC------------AGCAGCAGCAAATGCAGCAGCA------GCAGC---------AGCAGCAACTG---------C------------------AGCAGC---------------------------------------AACAGCAACAACAAC-------AACA----------T----GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCAGACTGGCGACGGCATATTCCCGTGGGGAGCTGCAT------TTAAAAGGCATTTAAGCCACAAAATCTCAAGCAGCAACAGTAGCAGCAGCTC-------------------------------------------------------------------------------CACC-------------------A-------------GCCACA---ATTACTGCAAGTAGGGG----------AGATCATTTGG--
droSec2 scaffold_0:7332020-7332247 - ----------------------------------------------A--ATGTCAACAGC------------AGCAGCAGCAAATGCAGCAGCA------GCAAC---------AACAACAGCAG---------C------------------AGCAGC---------------------------------------AACTGCAGCAGCAAC-------AACAACAACATACAGACAGTCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCAGACTGGCGACGGCATATTCCCGTGGGGAGCTGCAT------TTAAAAGGCATTTAAGCCACAAAATCTCAAGCAGCAACAGTAGCAGCAGCTC-------------------------------------------------------------------------------CACC-------------------A-------------GCCACA---ATTACTGCAAGTAGGGG----------AGATCATTTGG--
droYak3 2R:12157005-12157203 + CTG----------------AGTGCT--GCGC--AG-GAGTACC---A--ACAGCATCAGC------------AGCACCAGCAACACCAGCAGCA------CCAAC---------AGCATCAACAACATCAGCAAC------ATCAGCAGC---ATCAGC---------AACAGCAGCATC------------------AGCAGCATCAGCAAC-------ATCA-------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCAGCAGCACCAGCAACATC-------------------------------------------------AGCAGCAC---------C---------AACAAC----------------------------------ATCAGCAGCATCA-GCAGCA------------GGGTGGCG----------G--------TG--
droEre2 scaffold_4690:2333193-2333381 - ----------------------------------------------A--GCAGCAGCAGC------------AACAACAGCAACAGCAGCAGGC------GCAAC---------AAGAACAGCAG---------A------------------GGCAGC---------------------------------------AACAGCAGCAGCAGC-------AACAACAGCA---------------------GCAAACCCATC------------------------CAGT--------------------------------------------------------------------------------------------------------------------------GAAACATTC---AGCATCCA--GCTC-----------TTC-CTCCACCAACAACAGC-------------------------------------------------------------------------------------------------------------------AACAGCAAC------------------ACAAACTCCAA------CAAC-------------------AGCA----------ACAGCA---------------ATAACCCGCCGGCGGCG--------A--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TTAGCATTGATGA-TTCTGGTTTCT--GTGT------G----GTAGA--ACAGCAACAAC------------AACACCAACAACAACAGCATCA------CCAAC---------AACAACAACAG---------C------------------AGCAGC---------------------------------------AGCATCATCATCAAC-------AACAACAATT---------------------GCAGCCTACTC------------------------CA-------------AGG------------------------------------------------------------------------------------------AAACTAAAGTTGTCTACTCAGGGA-----------ACT--GGC--------------------------------------------------------------CAAAATCAATTAACACATGATTCCTC-----------------------------------------------------------TACACCAC------------------CATCAGCTTCAG------CATC-------------------AGCA----------TCAGCA---TTTCCTGTTGGCGGTGA----------AGATAATTTAGTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................GC---------------------------------------AGCATCATCATCAAC-------AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100010
..........................................................................................ATCA------CCAAC---------AACAACAACAG---------C------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010
...........................................................................................................................................................CAGC---------------------------------------AGCATCATCATCAAC-------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20100010
.........................................................................................................................................................AGCAGC---------------------------------------AGCATCATCATCAAC-------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.20100010
.......................................................................................AGCATCA------CCAAC---------AACAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.14100010
.......................................................................................................AC---------AACAACAACAG---------C------------------AGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
.......................................................................................................AC---------AACAACAACAG---------C------------------AGCAGC---------------------------------------AGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..................................................................................................................AACAACAACAG---------C------------------AGCAGC---------------------------------------AG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
........................................................................................................................AACAG---------C------------------AGCAGC---------------------------------------AGCATCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
droVir3
CCAGCATGGAGCA-TTCGGGCGTAGTGTTGCGTAAGGACAACA---A--AAAACAGCAAC---------AGCA------ACA------ACAACAACAACAACAA------------CAGCAGCAA---------C------------------AGCAGC---------------------------------------AACAGCAGCA-------------G--ACGGCG---------------------GCAAAATCGACTAAATCGCCCAAAAATGTACACTTAAAA---------------------------------------------------------------------------------------------------------------------------------------------AATGCT--------------------------------------------------------------CAACAGC------------------------------------------------------------------------------AGCAGCCAC------------AGGAACAACAACAACAACAACAACAAC-------------------AACA----------ACAGCG------------------------------------TCT----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.CAGCATGGAGCA-TTCGGGCGTAGTGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC------------------------------------------------------------------------------AGCAGCCAC------------AGGAAC.......................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................G---------------------GCAAAATCGACTAAATCGCCCAAAAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC-------------------AACA----------ACAGCG------------------------------------TC.....1960.171000000001000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAC-------------------AACA----------ACAGCG------------------------------------T......2170.141000000000000000000000000000010000000000000000000000000000000000
..................................................................................................CAACAA------------CAGCAGCAA---------C------------------AGCAGC---------------------------------------AACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2890.111000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAACAACAACAACAAC........................................................................................19200.102000200000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAAC-------------------AACA----------ACA..............................................23200.051000000000000000001000000000000000000000000000000000000000000000
........................................................................................ACAACAACAACAACAA------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000010000000000000000000000000
.....................................................CAGCAAC---------AGCA------ACA------ACAACAACAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................CA------ACAACAACAACAACAA------------CAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................C------------------AGCAGC---------------------------------------AACAGCAGCA-------------G--A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTATCATTGATGA-CTCGCAGCT------G------GGCCTTA---T--GGAACAGCAGC---------AACA------ACA------GCAGCACCAGCAACAAC---------AGCAGAATCAG---------C------------------AGCAGC---------------------------------------AACAGCAA-------------------ACGTT---------------------GCCGCG----------------------------------------------T------------------------------------------------------------------------------------------AAATTAAAGTATATGAACTATGGG-----------CAA--AGCCAACATCAACAGACACAGAGACTAGCAACGCCCT--TTCCGTCGCCATCACCA-----------------------TCACAACATTTG---------------------------------------------------------------------------------------GAAATAGCAA------CAAATGGAAATCCAAACTTGAGCT--------------------------TCTCTGGCGGTGA----------TGATGATCTGTTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................CA------ACA------GCAGCACCAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.111000010
...................................................AACAGCAGC---------AACA------ACA------GCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
....................................................ACAGCAGC---------AACA------ACA------GCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
....................................................ACAGCAGC---------AACA------ACA------GCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
droGri2
TAA-CATTGAAGCTAACTAATTTCA--GTCA------G----CTCGA--GCAGCAACAGC------------AGCAGCAGCAACAACAACAGCA------ACAAC---------AACAACAGCAG---------C------------------AGCAGC---------------------------------------AGCAGCAGCAGCAGC-------AACAACAACA---------------------ACAGTGCG------------------------------------------AGGCAACAA------------------------------------------------------------------------------------------CAGC----TGC-AAGTCAACAGTTGGCAACAG---TTGT------GCAAACA----GAG---CGGCAG-----------------------------C-AAGAAGC-----AGCCACCACAACAGC----------------------------------------------------------AACAGCAAC------------------AGTAACCGCAA------CAGT-------------------AGCA----------ACAGCA-------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................AACAACAACAGCA------ACAAC---------AACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10220
dp5
TGAGCGTGGCATGCATCACGTTTCC--CTGG------GCT------A--TCAGGGACACCAGC------ATCAGCAACAACAACAACAGCAGCA------GCAGC---------AGCAACAACAA---------C------------------AGCAGC---------------------------------------AACAGCAACAACAAC-------AACAGCAGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGCGCCAG--TGCAACCGCCGCAG----TTTGATC-TAGAGGC-----AACC---------------------------GCCTTCC-------------------------------------CACCAC------------------TGC---CAGC-------------------------------CTCGTCG-------GCATCG---GTA-------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------------------CACCAC------------------TGC---CAGC-------------------------------CTCGTCG-------G................................................2212.0020200000000
...........TGCATCACGTTTCC--CTGG------GCT------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................ACAAC-------AACAGCAGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGC........................................................................................................................................................................................................................................................2111.0010100000000
..................CGTTTCC--CTGG------GCT------A--TCAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................AACAGCAGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGCGCCAG--TGC..............................................................................................................................................................................................................................................2411.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TTTGATC-TAGAGGC-----AACC---------------------------GC..........................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCC-------------------------------------CACCAC------------------TGC---CAGC-------------------------------CTCGTCG-------G................................................2611.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAG----TTTGATC-TAGAGGC-----AA.........................................................................................................................................................................................................2111.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----TTTGATC-TAGAGGC-----AACC---------------------------GCCTTCC-------------------------------------CAC.............................................................................................................................2911.0010010000000
........................................................................AGCAACAACAACAACAGCAGCA------GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020110000000
...........................................................................AACAACAACAACAGCAGCA------GCAGC---------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000200
............................................................................................CA------GCAGC---------AGCAACAACAA---------C------------------AGCAGC---------------------------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28110.0910001000000
....................................................................................................GCAGC---------AGCAACAACAA---------C------------------AGCAGC---------------------------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.0810001000000
........................................................................................................C---------AGCAACAACAA---------C------------------AGCAGC---------------------------------------AACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24130.0810100000000
...................................................................................................................GCAACAACAA---------C------------------AGCAGC---------------------------------------AACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.0710010000000
.........................................................................................................................................................................................................AGCAACAACAAC-------AACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.........................................................................GCAACAACAACAACAGCAGCA------GCAGT---------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
.....................................................................................................................AACAACAA---------C------------------AGCAGC---------------------------------------AACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
.......................................................................................................GC---------AGCAACAACAA---------C------------------AGCAGC---------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.........................................................................................CAGCA------GCAGC---------AGCAACAACAA---------C------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.........................................................................GCAACAACAACAACAGCAGCA------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..........................................................................CAACAACAACAACAGCAGCA------GCAGC---------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
..........................................................................................................................CAA---------C------------------AGCAGC---------------------------------------AACAGCAACAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
........................................................................AGCAACAACAACAACAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
CAA-CAA-----------------------------CATTATC---A--TCAACAACAACAGCACCATC---A------ACAACAGCAACAACA------CCAACAGCATCATCATCATCAGCTA---------C------------------AACAGCAACTGCTGCTCCAGCAACAACAACAACAGCAGCAACAGCAACTGCAGCAGCAAC-------AGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACAACAGCAATTAC---AACAGCAGCAACAGCAA------CAGC-------------------A-------------GCAACA---ACAATTGCTAATG---------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................GCAACAACAACAACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
..............................................................................................................................................................................AACAACAACAACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
...............................................................................................................................................................................ACAACAACAACAGCAGCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droAna3
----------------------------------------------ACAATGTCAACAGC------------AACAGCAGCA---ACAGCAACAACAGCAA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------AACGGCAACA-------------ACA----------G----GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCAGACTGGCGACGGCATATTCCCGTGGGGAGCTGCAT------TTAAAAGGCATTTAAGCCACAAAATCTCAAGCA---ACAGTAGCTGCAGCTC-------------------------------------------------------------------------------CACC-------------------A-------------CCAACA---ATTACTGCAACAAGGGG----------AGATCATTTAG--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................AACAACAGCAA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331010000
...................................................................................................AA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.153030000
.................................................................................................GCAA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153021000
..........................................................................................AACAACAGCAA---------------CAACAGCAG---------C------------------AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131010000
...................................................................................................AA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102010001
........................................................................AACAGCAGCA---ACAGCAACAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22180.061010000
...........................................................C------------AACAGCAGCA---ACAGCAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
..............................................................................................ACAGCAA---------------CAACAGCAG---------C------------------AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
....................................................................................................A---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
.....................................................CAACAGC------------AACAGCAGCA---AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
...........................................................................AGCAGCA---ACAGCAACAACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
................................................................................................AGCAA---------------CAACAGCAG---------C------------------AGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
......................................................AACAGC------------AACAGCAGCA---ACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
........................................................................AACAGCAGCA---ACAGCAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
..............................................................................................ACAGCAA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
droBip1
----------------------------------------------A--ACAGCCACACC------------TGCAACATCAGCAGCAGCAACA------GCAAC---------AACAACAACAA---------C------------------AGCAGC---------------------------------------AGCAGACACATCAAC-------AACATATGTT---------------------GCAACA----------------------------------------------TCCGCACACG---------------------------------------------------------------------------------CATTCGCT----TCCACACGGCC----------------------------------------------------------------------------------AACAGGCACTT---CCACATCCTCACACGCATCCACATCCACATCCACAT------------CC------------CCATCCGC-ATTCGCAC------------------------------------TCGC-------------------A-------------TCCACA---CCATCTGCAGCCAGGAA----------CACCCACTCGG--SizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------A--GCAGCAGCAAC------------ACTCCCAGCAGCAGCAACATCT------C---------------CAGCAGCAA---------C------------------AGCAGC---------------------------------------AACTGCAGCAGCAGCACAATGCAACATCCTTT---------------------GCCG----------------------------------------------GCGCCACAGCATTGCTGCATATTAAAACCGAGCAGAAT-----------------------------------------------------------------------------------------ACTT-----------------------------------------------------------------------T--GCTTACACCGCACCAACTG----------------------------------------------------------------------------------------CAGCAGCAA------CAAC-------------------AGCAGCAGCA-CAGCT--TA---CATGTTGCAGGAGGCGG----------CAA----------SizeHit CountTotal NormTotal
No Reads
droFic1
CAG-CATTGGAGAAGGTTGA----------------------TGAGA--GCAGC----CC------AGCTACAGCAGCAACAACTGCAGCAGCA------GCAGC---------AGCAGCAACAT---------C------------------AGCAGC---------------------------------------AACAATAGCATCAAC-------CACTGCAACA---------------------GAAGCA---------------------GAACATTTAAGTATTACTAACCGTAGCAATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATAGCAAAATA---------A----TTAGAGTAGATCAGCTGGCAGAGGAG----GAGCCTGCAGCAC---------TATCTG------CTGCAGC--------CAGC-------------------AGCA----------GCAGCA-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
----------------------------------------------A--ATGTCAACAGC------------AGCAGCAGCAGCAACTGCAACAACAGCAA---------------CAACAGCAG---------C------------------AGCAGC---------------------------------------AACTGCAACAACAGC-------AACAACAACA-ACAG----GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCAGACTGGCGACGGCGTATTCCCGTGGGGAGCTGCAT------TTAAAAGGCATTTAAGCCACAAAATCTCAAGCAGCCACAGTAGCTGCAGCTC-------------------------------------------------------------------------------CACC-------------------A-------------GCAACA---ATTACTGCAAGTAGGGG----------AGATCATTTAA--SizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------A--GCAGCAGCAAC------------AACAGCAGCAGCAACAGCAGCA------ACAAC---------AGCAGCAACAG---------C------------------AGCAGC---------------------------------------AACAACAGCAGCAAC-------AACAGCAGCA---------------------GCAGCA----------------------------------------------GCAACACCAA---------------------------------------------------------------------------------CAACCACA----GC----------------------------------------------------------------------------------------------------------------AACACTTGAAGTACCAGCAACTGCAATAT------------CA---------------AATGC-AGCAGCAATATGAATACC---------AGCAGCAGCAG---CACTACC-------------------A-------------GCAGCA---GTTCC-----------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
----------------------------------------------A--GCAGCAACAGC------------AACACCAGCAATACCAGCAGCA------GCAAC---------AACAGCAGCAG---------C------------------AGCAAC---------------------------------------ACCAACAGCAGCAGC-------AGACACAGTG---------------------GCAACATCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGACAGCGACAACAGGTGCAGCTGTGGAGATGCC---------AACAAGCGTGAAAGTAG------C-------------------------------------------------------------------TGAAGACACCGC---AGCAACATCAACATCAA------CGGC-------------------A-------------GCAACA---GTAATTGCCAGTGA----------------------AG--SizeHit CountTotal NormTotal
No Reads
droTak1
GTGCC--------------------------------------------ACAGCAGCAGC------------AGCAGCAGCAGCGGCAGCAGCA------ACCAC---------AACAGTAACAA---------C------------------AGCAGC---------------------------------------AACAGCAACATCAAC-------CA---------AGAA----GCAGACATATCGGGA--A----------------------------------------------ACTGCAACAG---------------------------------------------------------------------------------CAACCACA----GTCACTAAGAGAACA---AGCAACAA-------------------------------------------------------------------------------AGCCAACATAGC---AGCAGCAACAGAAGCAACA------------------------------TTAAACGC-CTCC---------------------------AAAGCAG------CAGC-------------------A-------------GCAACA---GATGTTGCTGGTGGC-------------A-ATAGCAAT--SizeHit CountTotal NormTotal
No Reads
droEug1
----------------------------------------------A--ACAACAACAGC------------AGCAGCAGCAACAGCAGCAACA------GCAGC---------AGCAGCAACAG---------C------------------AGCAGC---------------------------------------AGCAGCAGCAACAGC-------AACAACAGTT---------------------GCAACT----------------------------------------------GCAGCAACAAAATGATATTTTATTA-CGAGAGGAGATCGATGATATAGACGCCTTTCTCAATCTGTCACCCCTGCAATCCTCCATAAATC--------------------------------------------------------------------------------------------------------------------------------------------------CCTTCAGCTC---------------------------------C-AGCAGCAAT------------------AACAACTATAA------TGGT-------------------GGCA----------GCA------------------------------------ACAATAAT--SizeHit CountTotal NormTotal
No Reads
dm3
CAG-CAG-----------------------------GTCCTTG---C--CCAGCAGCAGCAGCATCAGC---A------GCAGCAGCAACAGCA------CCAGC------------ATCAGCACCAG------CAGCAACACCAACAGCAGCAGCAGC---------------------------------------AGCAGCAGCAGCAAC-------AGC------A---------------------ACAGT--------------------------------------------------------------------------------------------------------------------CCTTGCAATTTCATGCCAATCCCTTTGGCA----ATCCT-------------G------------------------GCGGCAATAGCTGGGAAAGTAAATTCTCGGCGGCAGC--------------------------------------------------------------------------------------------------------------TGTTGC---AGCAGCGGCAGCAACTG------CGAC-------------------A-------------GGAGCAGCACCTGCCAACGGCAATAG----------CAATAATCT----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................CCAGC------------ATCAGCACCAG------CAGCAACAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGCCAACGGCAATAG----------CAAT.........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ATGCCAATCCCTTTGGCA----ATCCT-------------G------------------------GCGGC....................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGCAGCAACTG------CGAC-------------------A-------------GGAGCAGCA........................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCCAACGGCAATAG----------CAAT.........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCA----ATCCT-------------G------------------------GCGGCAATAGCT.............................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATCCCTTTGGCA----ATCCT-------------G------------------------GCGGC....................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCTGGGAAAGTAAATTCTCGGC..........................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCCAACGGCAATAG----------CAATAATC.....2612.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGGCA----ATCCT-------------G------------------------GCGGCAATAG...............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAGCACCTGCCAACG..............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGCCAACGGCAATAG----------CA...........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................T-------------G------------------------GCGGCAATAGCTGGGAAAG......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................GC------A---------------------ACAGT--------------------------------------------------------------------------------------------------------------------CCTTGCAATTTCATGC......................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTTCATGCCAATCCCTTTGGCA----ATCCT-------------..................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTTTGGCA----ATCCT-------------G------------------------GCGGC....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCA----ATCCT-------------G------------------------GCGGCAATAGCTGG...........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................T-------------G------------------------GCGGCAATAGCTGGGAAAGTAAAA.................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..G-CAG-----------------------------GTCCTTG---C--CCAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGCCAACGGCAATA........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG------CGAC-------------------A-------------GGAGCAGCACCTGCCAACGG.............................2711.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTTGCAATTTCATGCCAATCCCTTTGGCA----A...................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATAGCTGGGAAAGTAAATTC...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TTG---C--CCAGCAGCAGCAGCATCAGC---A------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCACCTGCCAACGGCAATAG----------CAA..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG------CGAC-------------------A-------------GGAGCAGCACCTGCCAACG..............................2711.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCTGGGAAAGTAAATTC...............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------A-------------GGAGCAGCACCTGCCAACGGCAAT.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CGAC-------------------A-------------GGAGCAGCACCTG....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCTGGGAAAGTAAATTCTCGG...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTAAATTCTCGGCGGCAGC--------------------------------------------------------------------------------------------------------------TGTTGC---AGC..........................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CAGCAGCAAC-------AGC------A---------------------ACAGT--------------------------------------------------------------------------------------------------------------------CCT...................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................GCAGCAGCAACAGCA------CCAGC------------ATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
----------------------------------------------ACAATGTCAACAGC------------AGCAGCAGCAAATGCAGCAGCA------GCAGC---------AGCAGCAACTG---------C------------------AGCAGC---------------------------------------AACAGCAACAACAAC-------AACA----------T----GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCAGACTGGCGACGGCATATTCCCGTGGGGAGCTGCAT------TTAAAAGGCATTTAAGCCACAAAATCTCAAGCAGCAACAGTAGCAGCAGCTC-------------------------------------------------------------------------------CACC-------------------A-------------GCCACA---ATTACTGCAAGTAGGGG----------AGATCATTTGG--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
----------------------------------------------A--ATGTCAACAGC------------AGCAGCAGCAAATGCAGCAGCA------GCAAC---------AACAACAGCAG---------C------------------AGCAGC---------------------------------------AACTGCAGCAGCAAC-------AACAACAACATACAGACAGTCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGTCAGACTGGCGACGGCATATTCCCGTGGGGAGCTGCAT------TTAAAAGGCATTTAAGCCACAAAATCTCAAGCAGCAACAGTAGCAGCAGCTC-------------------------------------------------------------------------------CACC-------------------A-------------GCCACA---ATTACTGCAAGTAGGGG----------AGATCATTTGG--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................AGCAAATGCAGCAGCA------GCAAC---------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5011000
..............................................................................AGCAAATGCAGCAGCA------GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.4021001
..............................................................................AGCAAATGCAGCAGCA------GCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310010
..................................................TGTCAACAGC------------AGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310010
................................................................................CAAATGCAGCAGCA------GCAAC---------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410010
.................................................................................AAATGCAGCAGCA------GCAAC---------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.0910010
...........................................................................................................................................................CAGC---------------------------------------AACTGCAGCAGCAAC-------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.0610010
....................................................TCAACAGC------------AGCAGCAGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.0610010
...........................................................................................GCA------GCAAC---------AACAACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510010
droYak3
CTG----------------AGTGCT--GCGC--AG-GAGTACC---A--ACAGCATCAGC------------AGCACCAGCAACACCAGCAGCA------CCAAC---------AGCATCAACAACATCAGCAAC------ATCAGCAGC---ATCAGC---------AACAGCAGCATC------------------AGCAGCATCAGCAAC-------ATCA-------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCAGCAGCACCAGCAACATC-------------------------------------------------AGCAGCAC---------C---------AACAAC----------------------------------ATCAGCAGCATCA-GCAGCA------------GGGTGGCG----------G--------TG--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................ATC------------------AGCAGCATCAGCAAC-------ATCA-------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A..........................................................................................................................................................................................................2511.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCATCA-GCAGCA------------GGGTGGCG----------G--------T...2511.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCATCA-GCAGCA------------GGGTGGCG----------.............2611.00100010000000
...................................................................................................................................CAAC------ATCAGCAGC---ATCAGC---------AACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCA-GCAGCA------------GGGTGGC........................1811.00101000000000
....................................................................................................................................................................................................................C-------ATCA-------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCAGCAGCACCAGC.........................................................................................................................................................................................2520.50101000000000
.............................................................................................................................................................................................................................TCA-------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCAGCAGCACCAGCAACA.....................................................................................................................................................................................2720.50101000000000
..........................................................................CACCAGCAACACCAGCAGCA------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010000000
..........................................C---A--ACAGCATCAGC------------AGCACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100100000000
..................................................................................................................................GCAAC------ATCAGCAGC---ATCAGC---------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20100000010000
................................................................................................................................................................................................................GCAAC-------ATCA-------------------------------------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCAGC..................................................................................................................................................................................................2050.20100000010000
.........................................................................GCACCAGCAACACCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17101000000000
.........................................................................................................................................................................................................................................................................................................GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATCAGCAGCACCAGC.........................................................................................................................................................................................2070.14100100000000
.............................................................................................................................................................GC---------AACAGCAGCATC------------------AGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000000000
droEre2
----------------------------------------------A--GCAGCAGCAGC------------AACAACAGCAACAGCAGCAGGC------GCAAC---------AAGAACAGCAG---------A------------------GGCAGC---------------------------------------AACAGCAGCAGCAGC-------AACAACAGCA---------------------GCAAACCCATC------------------------CAGT--------------------------------------------------------------------------------------------------------------------------GAAACATTC---AGCATCCA--GCTC-----------TTC-CTCCACCAACAACAGC-------------------------------------------------------------------------------------------------------------------AACAGCAAC------------------ACAAACTCCAA------CAAC-------------------AGCA----------ACAGCA---------------ATAACCCGCCGGCGGCG--------A--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................AC---------AAGAACAGCAG---------A------------------GGCAGC---------------------------------------AACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.....................................................................................GCAGCAGGC------GCAAC---------AAGAACAGCAG---------A------------------G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------ATAACCCGCCGGCGGC............2011.0010100000
.........................................................AGC------------AACAACAGCAACAGCAGCAGGC------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
..............................................................................AGCAACAGCAGCAGGC------GCAAC---------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5011000000
.........................................................................ACAACAGCAACAGCAGCAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2011000000
.......................................................GCAGC------------AACAACAGCAACAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810000010
.........................................................AGC------------AACAACAGCAACAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.0610000010
...........................................................C------------AACAACAGCAACAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001000
...........................................................C------------AACAACAGCAACAGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000
...........................................................C------------AACAACAGCAACAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000

Generated: 05/17/2015 at 10:56 PM