ID:

dwi_3406

 Coordinate:

scf2_1100000004943:9903565-9903715 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.8 -10.6 -10.5

Flybase annnotation

exon [dwil_GLEANR_14461:3]; CDS [Dwil\GK14144-cds]; intron [Dwil\GK14144-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-
mature
  1. scf2_1100000003584:5822-5845 +
  2. scf2_1100000003715:1384-1407 +
  3. scf2_1100000002404:1773-1796 +
  4. scf2_1100000004542:84726-84749 +
  5. scf2_1100000004585:468646-468669 +
  6. scf2_1100000004762:5508939-5508962 +
  7. scf2_1100000004852:175817-175840 +
  8. scf2_1100000004943:661428-661451 +
  9. scf2_1100000004943:3675320-3675343 +
  10. scf2_1100000004943:5790744-5790767 +
  11. scf2_1100000004943:7973195-7973218 +
  12. scf2_1100000004921:4424918-4424941 +
  13. scf2_1100000004921:4451921-4451944 +
  14. scf2_1100000004936:1169961-1169984 +
  15. scf2_1100000004949:354953-354976 +
  16. scf2_1100000004949:1042028-1042051 +
  17. scf2_1100000004958:1974045-1974068 +
  18. scf2_1100000004961:2765505-2765528 +
  19. scf2_1100000004967:4240706-4240729 +
  20. scf2_1100000012620:553-576 +
  21. scf2_1100000002566:1342-1365 +
  22. scf2_1100000002460:2076-2099 +
  23. scf2_1100000000815:4038-4061 +
  24. scf2_1100000004513:827280-827303 +
  25. scf2_1100000004585:4827756-4827779 +
  26. scf2_1100000004884:1177122-1177145 +
  27. scf2_1100000004943:847094-847117 +
  28. scf2_1100000004943:1245155-1245178 +
  29. scf2_1100000004943:2988444-2988467 +
  30. scf2_1100000004943:2990087-2990110 +
  31. scf2_1100000004943:5628301-5628324 +
  32. scf2_1100000004943:7266058-7266081 +
  33. scf2_1100000004943:8590655-8590678 +
  34. dwi_3406  scf2_1100000004943:9903572-9903595 +
  35. scf2_1100000004902:10383554-10383577 +
  36. scf2_1100000004949:1450489-1450512 +
  37. scf2_1100000004954:4311078-4311101 +
  38. scf2_1100000004954:4946951-4946974 +
  39. scf2_1100000004961:3771871-3771894 +
  40. scf2_1100000012546:1243-1266 +
star
  1. scf2_1100000002460:2122-2148 +
  2. scf2_1100000002404:1819-1845 +
  3. scf2_1100000000815:4084-4110 +
  4. scf2_1100000004513:827326-827352 +
  5. scf2_1100000004521:8648855-8648881 +
  6. scf2_1100000004585:4827802-4827828 +
  7. scf2_1100000004620:265371-265397 +
  8. scf2_1100000004884:1177168-1177194 +
  9. scf2_1100000004943:1245201-1245227 +
  10. scf2_1100000004943:7266104-7266130 +
  11. scf2_1100000004943:7973241-7973267 +
  12. dwi_3406  scf2_1100000004943:9903618-9903644 +
  13. scf2_1100000004943:10599340-10599366 +
  14. scf2_1100000004921:4424964-4424990 +
  15. scf2_1100000004936:1170007-1170033 +
  16. scf2_1100000004949:354999-355025 +
  17. scf2_1100000004949:1042074-1042100 +
  18. scf2_1100000004958:1974091-1974117 +
  19. scf2_1100000004961:2765551-2765577 +
  20. scf2_1100000012546:1289-1315 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAAAACGCGTACGCACCGACGGACAGACGGACATGGCTATATCGACTTAGCTTCTCATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTGCGTTACAAACATCTGACCAATTTTATAATACCCTCTGCAAGGGTATAAAAAGTCGATCAAAATGTATTTCATAATAAATATTGTATTTGTAGGACAACTTTCTGCCGCCAGATCAGCGTTGCAGCTATGAGTGCACCAAAGA
*********************************************************.............................((((((((((((..........))))).......)))))))...************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 V118
embryo
 M045
female body
 M020
head
 V119
head
.........................................................TGCTGATCAAGAATATATATACTT.......................................................................................................................................................................... 24 0 20 1.40 28 0 28 0 0 0
..........................................................................................................................................................................................................................ACATCAGCGTTGCAGCTATGAGTGCACCA.... 29 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................GATCAGCGTTGCAGCTATGAGT.......... 22 0 1 1.00 1 1 0 0 0 0
.....................................................................ATATATATACTTTATGGGGTC................................................................................................................................................................. 21 0 20 0.15 3 0 3 0 0 0
.......................................TATCGACTTAGCTTCTCATGCTGA............................................................................................................................................................................................ 24 0 20 0.10 2 0 2 0 0 0
.......................................................................................................TCTGTGCGTTACAAACATCTGACCAAT......................................................................................................................... 27 0 20 0.10 2 0 0 2 0 0
.......................................TATCGACTTAGCTTCTCATGCTG............................................................................................................................................................................................. 23 0 20 0.10 2 0 0 2 0 0
........................................................................................................CTGTGCGTTACAAACATCTGACCAATTT....................................................................................................................... 28 0 20 0.10 2 0 0 2 0 0
.........TACGCACCGACGGACAGACGGACATG........................................................................................................................................................................................................................ 26 0 15 0.07 1 0 1 0 0 0
TAAAACGCGTACGCACCGACGGACAGA................................................................................................................................................................................................................................ 27 0 20 0.05 1 0 1 0 0 0
...................CGGACAGACGGACATGGCTA.................................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0
.......................CAGACGGACATGGCTATATCG............................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1
................CGACGGACAGACGGACATGGCTT.................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 1 0
.........................................TCGACTTAGCTTCTCATGCTGATC.......................................................................................................................................................................................... 24 0 20 0.05 1 0 0 1 0 0
.........................................TCGACTTAGCTTCTCATGC............................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0
...............................................................................................................TTACAAACATCTGACCAATTT....................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
......................................................................................................TTCTGTGCGTTACAAACATCTGACCAAT......................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
.........................................................................ATATACTTTATGGGGTCGGAA............................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

ATTTTGCGCATGCGTGGCTGCCTGTCTGCCTGTACCGATATAGCTGAATCGAAGAGTACGACTAGTTCTTATATATATGAAATACCCCAGCCTTTGCAGAGGAAGACACGCAATGTTTGTAGACTGGTTAAAATATTATGGGAGACGTTCCCATATTTTTCAGCTAGTTTTACATAAAGTATTATTTATAACATAAACATCCTGTTGAAAGACGGCGGTCTAGTCGCAACGTCGATACTCACGTGGTTTCT
*************************************************************************************************************************.............................((((((((((((..........))))).......)))))))...********************************************************* 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 V119
head
 V117
male body		 M045
female body
................................................................................................CAGAGGAAGACACGCAATGTT...................................................................................................................................... 21 0 20 0.35 7 7 0 0 0
...............................................................................................................................................GACGTTCCCATATTTCTCAG........................................................................................ 20 1 9 0.11 1 0 1 0 0
.................................................................................................................TGTTTGTAGACTGGTTAAAATATTAT................................................................................................................ 26 0 20 0.10 2 0 2 0 0
.............GTGGCTGCCTGTCTGCCTGTACCGAT.................................................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0
....................................................................................................................................................................................................................AGGCGGTCTAGTCGGAGCG.................... 19 3 15 0.07 1 0 0 0 1
...................GCCTGTCTGCCTGTACCGATATAGCTGA............................................................................................................................................................................................................ 28 0 20 0.05 1 0 0 0 1
.............................................................................................................................................GAGACGTTCCCATATTTTTC.......................................................................................... 20 0 20 0.05 1 0 0 1 0
................GCTGCCTGTCTGCCTGTACC....................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0
.............................................................................................................................GGTTAAAATATTATGGGAGACGTTCC.................................................................................................... 26 0 20 0.05 1 1 0 0 0
...............................................................................................GCAGAGGAAGACACGCAATGTT...................................................................................................................................... 22 0 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004943:9903515-9903765 + dwi_3406 TAAAACG------------CGTACGCACCGACGGACAGACGGAC---A-TGGCTATATCGACTTAGCTTCTCATGCTGATCAAGAATAT----ATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTG----------CGTTACAAAC----------------ATC-------TGACCAATTTTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAAGT---------CG-------------------------------------------------------------------------------------ATCAAAATG--------------TAT---------------TTCAT--AATAAATATTGTA-----------TTT------GTAGG------------------ACAAC---------------------TTTCTGC-----------CG---------------------------------------CCAGATCAGCGTTGCAGCTATGAGT-----GCACCA---AAGA
droVir3 scaffold_12815:337703-337962 - TAGTTCGCATAGAAACAGACAGACGGACAGACGGACTGACGGAC---A-TGGCTATATCGGCTCGGCTGTTGATGCTGATTAAGAATAT----ATATACTTTATGGGGTCGGAGATGTCTCCTTCTATG----------CGTTACACAT----------------TTC-------ACGGCAAAATTATAATACCCTC-------------T----------GA-----AAGGGTATAAAAAGA---------AG--ACAAC--A---------------------------------------------------------------------------------AA----------------------C----------------------------------------------------------------------------------GCGCCTGCAACAAGAT-ATTCTGGCGGCAG-----CGACG---ACACCAGA----AGACCGACAG--------------------CGCTACAT---AGAGC-----GCATCA---AAGA
droMoj3 scaffold_6496:26568913-26569171 - TTTTGCT------------CATACGGACGGACGGACAGACGGAC---A-GGGCTATATCGACTCAGCTCGTCGTCCTGATCAAGAATAT----ATATACTTTATGGGGTCTGCGATGATTGCTTCTGCC----------TGTTACATAC----------------TTT-------TCA-CAAAACCATTATACCCTGATTTCCCATTTTCA----------ATGGGTTCAGGGTATAAAAAAT---------TA-AGAAAT--C----------------------------------------------------------------------------------------------------A--ATCGT-------------------------------------------------------------------------------ATTGC-----------------AAC---CATCATTGCAAAA---AC--------------TGACACCGTTTTTGCACCCACATCAGCATGGCAGGCATGT------------------GT
droGri2 scaffold_15110:9303926-9304224 - AACTA-CCATAA----GAACAGACAAACAGACGGACGGACAGAT---GGTGATAAAGCCATCTCGGCTACTGATGCTGATCAAGGATA------TATACTTGATGGGGTCAGAGACATCTCCTTTCCTAGAAAATCAGCCATTACAAAAATAACAAACTCAACAAATCGACTTTTGC-----------AATTC-----------------CACAATTGAAAAC-------------GAAAAAA----------------CTGCAGATCATCATCAAGTGATGAGCCAA----------------------TAGATGATGCCCAAGT-------------------------------------------------------------------------------------TTA--------GAAAG-----------------CAACTGTTCTGCTTG-------------CAAC-----------AAGAG---ATTCGGCC------------------------------------TTGTACCAATGAAAGGTGTGCAAC------AA
dp5 Unknown_group_854:2904-3170 - AGACGGA------------CGGACGGACAGACGGACAGACAGAC---A-TGGCTCAATCGACACGGCTATTGATGCTGATCAAGAATAT----ATATACTTTATGGGGTCGGAAACGATTCCTTCTGGA----------CGTTACACAC----------------ATCCACTTTTACCACAAATCTAATATACCCCGATA-------CTCA--------AAATGAGTATCGGGTATAAAAATG---------TT------------------------------------------------------------------------------------GACGAAAAAT--------------TATTACTGGCTGCATAAAATT-----------------TAAATATTACTTTT----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----ATAAAT-----GCATC-------A
droPer2 scaffold_125:31855-32121 + AGACGGA------------CGGACGGACAGACGGACAGACAGAC---A-TGGCTCAATCGACACGGCTATTGATGCTGATCAAGAATAT----ATATACTTTAGGGGGTCGGAAACGATTCCTTCTGGA----------CGTTACACAC----------------ATCCACTTTTACCACAAATCTAATATACCCCGATA-------CTCA--------AAACGAGTATCGGGTATAAAAATG---------TT------------------------------------------------------------------------------------GACGAAAAAT--------------TATTACTGGCTGCATAAAATT-----------------TAAATATTACTTTT----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----ATAATT-----GCATC-------A
droAna3 scaffold_13417:5893245-5893467 + AAAACTA------------GTTTCGTAGAAACCGACAGACGGAC---A-TTCTCATGTCGACTCAGGAGGTGATTCTGATCAAGAATAT----ATATACTTTAGAGGCTCGGAGATGTCTCCTTCTCTG----------CGTTGCACAC----------------TTT-------CGACCAAAATTATAATACCCTC-------------A----------GC-----AAGGGTGTAAAAATA---------GGGAAAAAT------------------------------------------------------------------------------------GTG--------------T------ATT----------A-T--CACAACT-----------------TTC---------GA------------------AAAAC---------------------TTCC-CT----------------------------------------------------CCACAG--T----TCAT---------------GTCAC--AGCT
droBip1 scf7180000393701:8749-8976 + TA-----------------GAAACAGACAGACGGACAGACGGAC---A-TGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATAT----ATATACTTTATAGGGTCGGAGATGTCTCCTTCACTG----------CGTTGCACAC----------------TTT-------TGGACAAAATTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAATTAATA-----------------------------------ATCGAAAAT-------------TATTAAT--------------------------------------------------------------------AATT---------------TA--ATTAT-------------------------------------CAAC---------------------CTTCTGT----------CCGAAT---AG----------------------------------------AGCCGCGGTTTCAATT-----CCACC--------
droKik1 scf7180000299576:6600-6829 + TAGTTTGCGTA--------GAAACGGACAGACGGACAGACGGAC---A-TTGCTAGATCGACTCGGCTATTGATGCTGATCGAGAATAT----TTATACTTTATAGGGTCGGAAACGTCTCCTTCACTG----------CGTTGCAAAC----------------TTC-------TGACTGAAATTATAATACCCT-------------------------GC-----AAGGGTATAAAAATG---------AG--------------------------------------------------------------------------------------CGAGAATTTAGGGGAAAAA-----------------------------------------------------------------AAATACCG---------------C-------ATAG-------------CAAC-----------AGCAGACAAAGCCGCC------------------------GCCATAA-----------------------------A---AGTA
droFic1 scf7180000454069:7717-7958 + A----------------------TGGACAGACGGACAGATGTAC---A-TACATATTTCGCTTCAGATTGTGATGCTGATCAAGAATATACATATATACTTTGTGGGGTCTAAGGTGTCTCCTTCACTG----------CGTTGCAAAC----------------TTC-------TGGCCAAAATTATAATACCCTT-TG-------CTCT----------GC-----AAGGGTATAAAAAAA---------TC--GTAAT--A------------------GACAGAAGT-------------TCTAAATAAATTGAGTATAAGT-------------------------------------------------------------------------------------TTC----------------------------------------GACAG-------------CA-A-----------CGGCT-----------------------------------------------GCGTAGTTATGAGTAG---CAACCA---AATA
droEle1 scf7180000491025:69298-69546 + TAGTTTG------------CGTAGAAACGGACGGACAGACGGAC---A-TAGCTAGGTCGACTCGCCTAGTGATGCTGATCAAGAATAC----ATATACTTTATAGGGTCGGAGATGTCTCCTTCATTG----------CGTTGCAAAC----------------TTC-------TGACTGAAATTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAAAC---------CA-AA-----------------------------------------------------------------------------------GGAAAA------------AAAATAT---------------TTAGTAAAAT--ATAT--------TATTTCCTTT---------------------GGTTTCAA-CAAC---------------------TTTTTGC-----------AAG-----------------------------------------------CGTCGCGGTACTGAAT-----CGACCA-----AA
droRho1 scf7180000763309:602-883 - ACAGAC----------GGACAGACGGACAGGCGGACAGACGGAC---A-TGGCTATATCGACTCCCCTATTGATCCTGATCAAGAATAT----ATATACTTTATAGGGTCGGAAACGTCTCCTTCACTG----------CGTTACAAAC----------------TTC-------TGACCAAAATTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAAGTATGC-----------------------------------GTACA------------------------------------AGTTTCAAAATTGTTTAATAAAGGT--------------ACTTAATTCTAGTA------------------------------TT----TAATAGGAAGTGGGGTACCCCTTTCTTTTAA-TAGT---------------------TTCATTT-----------AAA-----------------------------------------------CGTTTTGGCAATTATT-----GCACC------AA
droBia1 scf7180000297315:4813-5048 - TAGTTTG------------CGTAGAAACGGACGGACAGACGGAC---A-TAGTTAGATCGACTCGTCTAGTGACGCTGATCAAGAATAA----ATATACGTTATGGGGTGGGAAACGTTTCCTTCAATG----------TGTTGCAAAC----------------TTC-------TGA-CGAAATCATTATACCCTC-------------T----------GC-----AAGAGTATAAAAAGTATATATAAAGT-----------------------------------ATTACTATACATATAC-----------------------------------------------------------------------------T------TAAATTTTGTA-----------T------T-GTGGT------------------ATATC---------------------TTAC-------------------------------------------------------CCAAAT--GCGATGCGGTCG---------------------TG
droTak1 scf7180000414464:7114-7355 + TAGTTCGCATA--------GAAACGGACAGACGGACAGACGGAC---A-TGACTAGATAGACTCGGCTATTGGTGCTGATCAAGAATAT----ATATACTTTATGTGGTCGGAAACGTCTCCTTCACTG----------CGTTGCAAAC----------------ATC-------TGACTGAAATTATAATACCCTC-------------T----------AC-----AAGGGTATAAAACAA---------TA-AA---------------------------------------------------------------------------------------AA------------G-----------------GGGACTGATAGAATAAATGTTGTC-----------T--------------------------TTTAATAATC---------------------TTTAGTT-----------CAG-----------------------------------------------CGTTACAAAGGTTAGT-------ACCA---CAGA
droEug1 scf7180000409759:728004-728216 + --------------------------ACAGACGGACAGACGGAC---A-TGGGTATATCGACTCCCCTATTGATCCTGATCAAGAATAT----ATATACTTTATGGGGTCGGAAACGTCTCCTTTGCTG----------CGTTAAAAAC----------------TTC-------TGACCAAAATTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAAGTAATC-----------------------------------ATACGA--------------------------------------------------------------------------------TGGGTGCAT-------------------------TTTTT-----AT----------------------------------------CACTTCTACAAAAGCTAGTTGC-----------CT---------------------------------------TCAGAT----------------------------CAAATTCGC
dm3 chr2R:1380241-1380475 + CGAGAC----------GTTCATATGGACAGTCGGAGAGACGGAT---A-TGGCCAGATCGACTCGGCTATTGATCCTGATCCTGA-TAT----ATATACTTTATATGGTCGGAAACGCTTCCTTCTGCC----------TGTTACA--------------------TT-------TGAACGAATCTAGTATAACCACTTA-------ATCT----------ACGAGTAACGGGTATAAATATA---------GA------------------------------------------------------------------------------------AACAATAATT--------------T-C---------------TTT-----------------TTAATATT----TTCAATTATGTTG------------------AAAAC---------------------TTTCCAA-----------TG----------------------------------------------------GCAGGTAGTC-----------------GTT
droSim2 3l:20690345-20690571 + ATA----------------CGGACGGACAAACAGATAAATGGAC---A-TGTCCAGACCGACTTGGCTAGTGATCCTCTTCAAGAATAT----AAATACGTTTTAGGGTGGAAAACGATACCATCTAAC----------TGTTGCACAC----------------TTT-------TCAACGAATCTCGTATACCCAT-TA-------CTCT----------GGGAGTATAGGGTATAAAATGG---------GT--------------------------------------------------C-----------------------------------------------------------------------------T-----------------TAAATAT-----TT----------------------------------------CAATT-------------GTGC-----------CGGCC---------------------------------------AAACAGAATGGAAGCCATGAGA-----CCTCAA---CAGA
droSec2 scaffold_8:2213299-2213532 + TT-----------------CATACGGACAGACAGACGGATGGACCAAA-TCGCCAGTACGACTCGGCTATTGATCCTGATCAAGAATAT----ATATACTTAATATGGTCCAAAACGCTTTCTTCTACC----------TGTTAC--------------------TTT-------CGAACGAATCGAGTATACCCTTCTA-------CTCA----------ACGAATAACGGGTATAAAAATGTTTT-----------------------------------ACAGAATTT-------------CC-----------------------------------------------------------------------------------TAAATTTGTTA----------------------------------------------------------T-------------TTGC-----------AAACA---TGCCAACTTTGAAGA-----------------CACAGAT----------------------------CAACTGTGC
droYak3 v2_chrUn_4266:5311-5567 - TCATAC----------GGACGGACAGACAGACGGACAGACGGAC---A-TGGTCATATCGACTCGGCTATTGGTCCTGATCAAGAATAT----ATATACTTTATATGGTCGGAAACCCTTCCTTTTGCC----------TGTTACATAC----------------TTT-------TCAACGAATCTAGTATACCCTTTTA-------CTCT----------ACGAGTAACGGGTATAAAAACG---------AA--GCTAT--A----------------------------------------------------------------------------------------------------T--ATGGTAGTA------------------------------TA----TGCTAGTAAAAGGAGTA-----------------CCTTCCCTGCTTG-------------TAGT-----------CGGCG-----------------------------------------------ATGCAGTTG-GAGT-----CATCCC---AGGA
droEre2 scaffold_4690:8461310-8461553 + ATCG----------------AGGCGTTCAGACAGACACACGGAC---G-TGGCCAGAAGGACTCGGCTATTGATCCTGGTCAAGAACAT----A-ATACTTGATATGGTCGGAAACGCTTCCTTCTG-C----------TGTTACATAC----------------TCT-------TCAACGAAGCTAGAACACCCTTTCA-------CTCT----------ACGAGTAGCGGGTATAAATGGA---------AG----------------------------------------------------------------------------------------AAAAA-----------A-----------------GAAAATGGGAAAACGACTGTTGTA-----------AAC-------CAG---------------------AGC-----TGCTCG-------------CTC------------CGTG---------------------------------------A-GTGACCGCTGCAGGTACGA-----------------GCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TAAAACG------------CGTACGCACCGACGGACAGACGGAC---A-TGGCTATATCGACTTAGCTTCTCATGCTGATCAAGAATAT----ATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTG----------CGTTACAAAC----------------ATC-------TGACCAATTTTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAAGT---------CG-------------------------------------------------------------------------------------ATCAAAATG--------------TAT---------------TTCAT--AATAAATATTGTA-----------TTT------GTAGG------------------ACAAC---------------------TTTCTGC-----------CG---------------------------------------CCAGATCAGCGTTGCAGCTATGAGT-----GCACCA---AAGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................TGCTGATCAAGAATAT----ATATACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.4028000280
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCGTTGCAGCTATGAGT-----.............2211.00100100
.....................................................................................ATAT----ATATACTTTATGGGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15300030
.......................................................TATCGACTTAGCTTCTCATGCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200020
...........................................................................................................................TCTGTG----------CGTTACAAAC----------------ATC-------TGACCAAT....................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000
.......................................................TATCGACTTAGCTTCTCATGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
............................................................................................................................CTGTG----------CGTTACAAAC----------------ATC-------TGACCAATTT..................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
.....................TACGCACCGACGGACAGACGGAC---A-TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26150.07100010
TAAAACG------------CGTACGCACCGACGGACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
...............................CGGACAGACGGAC---A-TGGCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
...................................CAGACGGAC---A-TGGCTATATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
............................CGACGGACAGACGGAC---A-TGGCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05110000
.........................................................TCGACTTAGCTTCTCATGCTGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.........................................................TCGACTTAGCTTCTCATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
.............................................................................................................................................TTACAAAC----------------ATC-------TGACCAATTT..................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..........................................................................................................................TTCTGTG----------CGTTACAAAC----------------ATC-------TGACCAAT....................................................................................................................................................................................................................................................................................................................................................................................................28200.05100010
.............................................................................................ATATACTTTATGGGGTCGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000
droVir3
TAGTTCGCATAGAAACAGACAGACGGACAGACGGACTGACGGAC---A-TGGCTATATCGGCTCGGCTGTTGATGCTGATTAAGAATAT----ATATACTTTATGGGGTCGGAGATGTCTCCTTCTATG----------CGTTACACAT----------------TTC-------ACGGCAAAATTATAATACCCTC-------------T----------GA-----AAGGGTATAAAAAGA---------AG--ACAAC--A---------------------------------------------------------------------------------AA----------------------C----------------------------------------------------------------------------------GCGCCTGCAACAAGAT-ATTCTGGCGGCAG-----CGACG---ACACCAGA----AGACCGACAG--------------------CGCTACAT---AGAGC-----GCATCA---AAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................ACGGACTGACGGAC---A-TGGCTATATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000100000000000000000000000000000000
....................................TGACGGAC---A-TGGCTATATCGGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
....................................TGACGGAC---A-TGGCTATATCGGCTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
................................................................................TAAGAATAT----ATATACTTTATGGGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.55110010000000000000000000000100000000000000000000000000000000000000
...TTCGCATAGAAACAGACAGACGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.306000000000000000000000000060000000000000000000000000000000000000
...TTCGCATAGAAACAGACAGACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.204000000000000000000000000000040000000000000000000000000000000000
.............................................................................................................................................TTACACAT----------------TTC-------ACGGCAAAATTAT...............................................................................................................................................................................................................................................................................................................................................................................................2450.201000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................TTACACAT----------------TTC-------ACGGCAAAA...................................................................................................................................................................................................................................................................................................................................................................................................2060.171000000000000000000000000000000000000010000000000000000000000000
...TTCGCATAGAAACAGACAGACGGACAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.153300000000000000000000000000000000000000000000000000000000000000
...............................................................................TTAAGAATAT----ATATACTTTATGGGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000000000003000000000000000000000000000000
.........................................................................................................................CTTCTATG----------CGTTACACAT----------------TTC-------ACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................2670.141000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................TTACACAT----------------TTC-------ACGGCAAAATTATC..............................................................................................................................................................................................................................................................................................................................................................................................2580.131000000000000000000000000000010000000000000000000000000000000000
TAGTTCGCATAGAAACAGACAGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000020000000000000000000000000000000
.............................................................................................................................................TTACACAT----------------TTC-------ACGGCAAAATTAA...............................................................................................................................................................................................................................................................................................................................................................................................24110.091000000000000000000000000000010000000000000000000000000000000000
.......................................................................................AT----ATATACTTTATGGGGTCGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000100000000000000000000000000000000
...................................................................TGTTGATGCTGATTAAGAATAT----ATATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000010000000000000000000000000000000
......................................................................................TAT----ATATACTTTATGGGGTCGGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.........TAGAAACAGACAGACGGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
........................................................................................T----ATATACTTTATGGGGTCGGAGATGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000100000000000000000000000000000000000000000000000000000000
.............................................................................................ATATACTTTATGGGGTCGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................ACTTTATGGGGTCGGAGATGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
................................................................................................TACTTTATGGGGTCGGAGATGTCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................GATGCTGATTAAGAATAT----ATATACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................CTGTTGATGCTGATTAAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
TTTTGCT------------CATACGGACGGACGGACAGACGGAC---A-GGGCTATATCGACTCAGCTCGTCGTCCTGATCAAGAATAT----ATATACTTTATGGGGTCTGCGATGATTGCTTCTGCC----------TGTTACATAC----------------TTT-------TCA-CAAAACCATTATACCCTGATTTCCCATTTTCA----------ATGGGTTCAGGGTATAAAAAAT---------TA-AGAAAT--C----------------------------------------------------------------------------------------------------A--ATCGT-------------------------------------------------------------------------------ATTGC-----------------AAC---CATCATTGCAAAA---AC--------------TGACACCGTTTTTGCACCCACATCAGCATGGCAGGCATGT------------------GTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................TTTATGGGGTCTGCGATGATTGCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................26410.254112130178
...................................................................................................TTTATGGGGTCTGCGATGATTGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2542.7511510032
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---CATCATTGCAAAA---AC--------------TGACACCGTT..................................................2722.004200020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---CATCATTGCAAAA---AC--------------TGACACCGTTT.................................................2822.004200020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---CATCATTGCAAAA---AC--------------TGACACC.....................................................2421.503000030
..........................................................................................................................................................................................................................................ATAAAAAAT---------TA-AGAAAT--C----------------------------------------------------------------------------------------------------A--ATCGT-------------------------------------------------------------------------------A.......................................................................................................................2511.001100000
...........................................................................................................................................................................................................................................TAAAAAAT---------TA-AGAAAT--C----------------------------------------------------------------------------------------------------A--ATCGT-------------------------------------------------------------------------------ATTGC-----------------..................................................................................................2811.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---CATCATTGCAAAA---AC--------------TGACACCGTT..................................................2620.501100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTGCAAAA---AC--------------TGACACCGC...................................................2320.501000010
...................................................................................................TTTATGGGGTCTGCGATGATTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.502110000
...................................................................................................TTTATGGGGTCTGCGATGATTGCTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.502110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---CATCATTGCAAAA---AC--------------TGACACCGT...................................................2620.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCACATCAGCATGGCAGGCATGT------------------GT2730.331100000
....................................................................................................TTATGGGGTCTGCGATGATTGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.251010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCACCCACATCAGCATGGCAGGCATG.....................2840.251000010
...................................................................................................TTTATGGGGTCTGCGATGATTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.251000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGCACCCACATCAGCAT...............................21200.204400000
...................................................................................................TTTATGGGGTCTGCGATGATTGCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.111000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCACATCAGCATGGCAG..........................20200.102200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCACCCACATCAGCATGG.............................22200.102200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAAA---AC--------------TGACACCG....................................................19110.091100000
.....CT------------CATACGGACGGACGGACAGACGGAC---A-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
.....................TACGGACGGACGGACAGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
.................................................................................................................................................ATAC----------------TTT-------TCA-CAAAACCATTATACC.........................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCACCCACATCAGCATGGC............................21200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCACCCACATCAGCATGGCAGG.........................26200.051010000
.TTTGCT------------CATACGGACGGACGGACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
droGri2
AACTA-CCATAA----GAACAGACAAACAGACGGACGGACAGAT---GGTGATAAAGCCATCTCGGCTACTGATGCTGATCAAGGATA------TATACTTGATGGGGTCAGAGACATCTCCTTTCCTAGAAAATCAGCCATTACAAAAATAACAAACTCAACAAATCGACTTTTGC-----------AATTC-----------------CACAATTGAAAAC-------------GAAAAAA----------------CTGCAGATCATCATCAAGTGATGAGCCAA----------------------TAGATGATGCCCAAGT-------------------------------------------------------------------------------------TTA--------GAAAG-----------------CAACTGTTCTGCTTG-------------CAAC-----------AAGAG---ATTCGGCC------------------------------------TTGTACCAATGAAAGGTGTGCAAC------AASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
AGACGGA------------CGGACGGACAGACGGACAGACAGAC---A-TGGCTCAATCGACACGGCTATTGATGCTGATCAAGAATAT----ATATACTTTATGGGGTCGGAAACGATTCCTTCTGGA----------CGTTACACAC----------------ATCCACTTTTACCACAAATCTAATATACCCCGATA-------CTCA--------AAATGAGTATCGGGTATAAAAATG---------TT------------------------------------------------------------------------------------GACGAAAAAT--------------TATTACTGGCTGCATAAAATT-----------------TAAATATTACTTTT----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----ATAAAT-----GCATC-------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................TCGGAAACGATTCCTTCTGGA----------CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................23203.056100000006100
..ACGGA------------CGGACGGACAGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20201.302600000002600
.....GA------------CGGACGGACAGACGGACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.052100000002100
.....................GACGGACAGACGGACAGACAGAC---A-TGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28201.052100000000210
......................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTTT----------------------------------------GACTT-------------TTGC-----------CGACG---AGAC........................................................................2611.0010100000000
......A------------CGGACGGACAGACGGACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.601200000000120
.......................................CAGAC---A-TGGCTCAATCGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------TTG.............................2660.5030300000000
......................................ACAGAC---A-TGGCTCAATCGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----ATA.....................2550.4020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----ATAA....................2650.4020200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----........................2360.3320100100000
.............................................................................................ATATACTTTATGGGGTCGGAAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.3060600000000
................................................................................................................AAACGATTCCTTCTGGA----------CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.3066000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------TTGC-----------CGACG---AGACCACC------------------------------------TTG.............................2170.2920200000000
...........................CAGACGGACAGACAGAC---A-TGGCTCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2550000000050
...................................CAGACAGAC---A-TGGCTCAATCGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
.......................................................................................................................................................................................TCTAATATACCCCGATA-------CTCA--------................................................................................................................................................................................................................................................................................................................................................................2180.2520200000000
....................................................................................................................................................................................AAATCTAATATACCCCGATA-------C...........................................................................................................................................................................................................................................................................................................................................................................2190.2220200000000
.............................................................................................................................................................................TTACCACAAATCTAATATACCCCGATA-------C...........................................................................................................................................................................................................................................................................................................................................................................2850.2010100000000
..............................................................................................................................................................................TACCACAAATCTAATATACCCCGATA-------CT..........................................................................................................................................................................................................................................................................................................................................................................2850.2010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----........................2750.2010100000000
.....................................................................................................TATGGGGTCGGAAACGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2040000400000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC-----------CGACG---AGACCACC------------------------------------TTGT----ATA.....................2450.2010100000000
......................................................................................................................................................................................................TA-------CTCA--------AAATGAGTATCGGG..................................................................................................................................................................................................................................................................................................................................................2050.2010100000000
.............................................................................................................................................................................TTACCACAAATCTAATATACCCCGATA-------CT..........................................................................................................................................................................................................................................................................................................................................................................2950.2010100000000
.............................................................................................................................................................................TTACCACAAATCTAATATACCCCGAT....................................................................................................................................................................................................................................................................................................................................................................................2650.2010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------T...............................24100.2020200000000
.............................................................................................................................................................................TTACCACAAATCTAATATACCCCGA.....................................................................................................................................................................................................................................................................................................................................................................................2550.2010010000000
..............................ACGGACAGACAGAC---A-TGGCTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000400
.............................................................................................................................................................................TTACCACAAATCTAATATACCCCGATA-------............................................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCA......................................................................21120.1720200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCAC.....................................................................22120.1720100100000
..........................................AC---A-TGGCTCAATCGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----........................2260.1710000100000
............................AGACGGACAGACAGAC---A-TGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000003
.....................GACGGACAGACGGACAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000003
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC-----------CGACG---AGACCACC------------------------------------TTG.............................2070.1410100000000
.......................................................................................................................................................................................TCTAATATACCCCGATA-------CTC.........................................................................................................................................................................................................................................................................................................................................................................2090.1110100000000
.....................................................................................................................................................................................AATCTAATATACCCCGATA-------CT..........................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
.....................................................................................................................................................................................AATCTAATATACCCCGATA-------CTC.........................................................................................................................................................................................................................................................................................................................................................................2290.1110100000000
......................................................................................................................................................................................ATCTAATATACCCCGATA-------CTC.........................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
.......................CGGACAGACGGACAGACAGAC---A-TGGCTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.1020000000020
..............................................................................ATCAAGAATAT----ATATACTTTATGGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020020000000
..........................................................................................................................TTCTGGA----------CGTTACACAC----------------ATCC..................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020020000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------C...............................24100.1010010000000
.......................CGGACAGACGGACAGACAGAC---A-TGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------TT..............................25100.1010100000000
..........................................................................................................GGTCGGAAACGATTCCTTCTGGA----------CGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020020000000
......................ACGGACAGACGGACAGACAGAC---A-TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000002
........................GGACAGACGGACAGACAGAC---A-TGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000002000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC-----------CGACG---AGACCACC------------------------------------T...............................18110.0910100000000
.....................................................................................ATAT----ATATACTTTATGGGGTCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
..ACGGA------------CGGACGGACAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
.....................................................................................................................ATTCCTTCTGGA----------CGTTACACAC----------------AT....................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
........................GGACAGACGGACAGACAGAC---A-TGGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
................................................................................................TACTTTATGGGGTCGGAAACGATTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
......................ACGGACAGACGGACAGACAGAC---A-TGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000010
droPer2
AGACGGA------------CGGACGGACAGACGGACAGACAGAC---A-TGGCTCAATCGACACGGCTATTGATGCTGATCAAGAATAT----ATATACTTTAGGGGGTCGGAAACGATTCCTTCTGGA----------CGTTACACAC----------------ATCCACTTTTACCACAAATCTAATATACCCCGATA-------CTCA--------AAACGAGTATCGGGTATAAAAATG---------TT------------------------------------------------------------------------------------GACGAAAAAT--------------TATTACTGGCTGCATAAAATT-----------------TAAATATTACTTTT----------------------------------------GACTT-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----ATAATT-----GCATC-------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................TTCTGGA----------CGTTACACAC----------------ATC...................................................................................................................................................................................................................................................................................................................................................................................................................20200.357700000
..............................ACGGACAGACAGAC---A-TGGCTCAATCGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2960.171100000
..................................ACAGACAGAC---A-TGGCTCAATCGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.141010000
......................................ACAGAC---A-TGGCTCAATCGACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------TTGC-----------CGACG---AGACCACC------------------------------------TTGT----ATA.....................2590.111010000
........................GGACAGACGGACAGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000002
................................................................................................................AAACGATTCCTTCTGGA----------CG..............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
............................................................................................................................................GTTACACAC----------------ATCCACTTTTACCACAAAT...................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
...................................................................................................................CGATTCCTTCTGGA----------CGTTACACAC----------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000
droAna3
AAAACTA------------GTTTCGTAGAAACCGACAGACGGAC---A-TTCTCATGTCGACTCAGGAGGTGATTCTGATCAAGAATAT----ATATACTTTAGAGGCTCGGAGATGTCTCCTTCTCTG----------CGTTGCACAC----------------TTT-------CGACCAAAATTATAATACCCTC-------------A----------GC-----AAGGGTGTAAAAATA---------GGGAAAAAT------------------------------------------------------------------------------------GTG--------------T------ATT----------A-T--CACAACT-----------------TTC---------GA------------------AAAAC---------------------TTCC-CT----------------------------------------------------CCACAG--T----TCAT---------------GTCAC--AGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................CAACT-----------------TTC---------GA------------------AAAAC---------------------TTCC-CT----------------------------------------------------CCACAG--T----T.............................2911.001100000
........................................................GTCGACTCAGGAGGTGATTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................TTCGTAGAAACCGACAGACGGAC---A-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.331010000
...................................................................................................................TGTCTCCTTCTCTG----------CGTTGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204400000
...................................................CTCATGTCGACTCAGGAGGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111001000
.................................................................................................................GATGTCTCCTTCTCTG----------CGTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
...................................................................................................................TGTCTCCTTCTCTG----------CGTTGCACAC----------------T.....................................................................................................................................................................................................................................................................................................................................................................................................................25180.061100000
....................................................................................................................GTCTCCTTCTCTG----------CGTTGCACAC----------------......................................................................................................................................................................................................................................................................................................................................................................................................................23190.051100000
.....................................................................................................................TCTCCTTCTCTG----------CGTTGCACAC----------------TT....................................................................................................................................................................................................................................................................................................................................................................................................................24190.051100000
...............................................................................................................GAGATGTCTCCTTCTCTG----------CGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
..................................................................................................................ATGTCTCCTTCTCTG----------CGTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
...................................................................................................................TGTCTCCTTCTCTG----------CGTTGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
..................................................................................................................ATGTCTCCTTCTCTG----------CGTTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
...................................................................................................................TGTCTCCTTCTCTG----------CGTTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
........................GTAGAAACCGACAGACGGAC---A-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
droBip1
TA-----------------GAAACAGACAGACGGACAGACGGAC---A-TGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATAT----ATATACTTTATAGGGTCGGAGATGTCTCCTTCACTG----------CGTTGCACAC----------------TTT-------TGGACAAAATTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAATTAATA-----------------------------------ATCGAAAAT-------------TATTAAT--------------------------------------------------------------------AATT---------------TA--ATTAT-------------------------------------CAAC---------------------CTTCTGT----------CCGAAT---AG----------------------------------------AGCCGCGGTTTCAATT-----CCACC--------SizeHit CountTotal NormTotal
No Reads
droKik1
TAGTTTGCGTA--------GAAACGGACAGACGGACAGACGGAC---A-TTGCTAGATCGACTCGGCTATTGATGCTGATCGAGAATAT----TTATACTTTATAGGGTCGGAAACGTCTCCTTCACTG----------CGTTGCAAAC----------------TTC-------TGACTGAAATTATAATACCCT-------------------------GC-----AAGGGTATAAAAATG---------AG--------------------------------------------------------------------------------------CGAGAATTTAGGGGAAAAA-----------------------------------------------------------------AAATACCG---------------C-------ATAG-------------CAAC-----------AGCAGACAAAGCCGCC------------------------GCCATAA-----------------------------A---AGTASizeHit CountTotal NormTotal
No Reads
droFic1
A----------------------TGGACAGACGGACAGATGTAC---A-TACATATTTCGCTTCAGATTGTGATGCTGATCAAGAATATACATATATACTTTGTGGGGTCTAAGGTGTCTCCTTCACTG----------CGTTGCAAAC----------------TTC-------TGGCCAAAATTATAATACCCTT-TG-------CTCT----------GC-----AAGGGTATAAAAAAA---------TC--GTAAT--A------------------GACAGAAGT-------------TCTAAATAAATTGAGTATAAGT-------------------------------------------------------------------------------------TTC----------------------------------------GACAG-------------CA-A-----------CGGCT-----------------------------------------------GCGTAGTTATGAGTAG---CAACCA---AATASizeHit CountTotal NormTotal
No Reads
droEle1
TAGTTTG------------CGTAGAAACGGACGGACAGACGGAC---A-TAGCTAGGTCGACTCGCCTAGTGATGCTGATCAAGAATAC----ATATACTTTATAGGGTCGGAGATGTCTCCTTCATTG----------CGTTGCAAAC----------------TTC-------TGACTGAAATTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAAAC---------CA-AA-----------------------------------------------------------------------------------GGAAAA------------AAAATAT---------------TTAGTAAAAT--ATAT--------TATTTCCTTT---------------------GGTTTCAA-CAAC---------------------TTTTTGC-----------AAG-----------------------------------------------CGTCGCGGTACTGAAT-----CGACCA-----AASizeHit CountTotal NormTotal
No Reads
droRho1
ACAGAC----------GGACAGACGGACAGGCGGACAGACGGAC---A-TGGCTATATCGACTCCCCTATTGATCCTGATCAAGAATAT----ATATACTTTATAGGGTCGGAAACGTCTCCTTCACTG----------CGTTACAAAC----------------TTC-------TGACCAAAATTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAAGTATGC-----------------------------------GTACA------------------------------------AGTTTCAAAATTGTTTAATAAAGGT--------------ACTTAATTCTAGTA------------------------------TT----TAATAGGAAGTGGGGTACCCCTTTCTTTTAA-TAGT---------------------TTCATTT-----------AAA-----------------------------------------------CGTTTTGGCAATTATT-----GCACC------AASizeHit CountTotal NormTotal
No Reads
droBia1
TAGTTTG------------CGTAGAAACGGACGGACAGACGGAC---A-TAGTTAGATCGACTCGTCTAGTGACGCTGATCAAGAATAA----ATATACGTTATGGGGTGGGAAACGTTTCCTTCAATG----------TGTTGCAAAC----------------TTC-------TGA-CGAAATCATTATACCCTC-------------T----------GC-----AAGAGTATAAAAAGTATATATAAAGT-----------------------------------ATTACTATACATATAC-----------------------------------------------------------------------------T------TAAATTTTGTA-----------T------T-GTGGT------------------ATATC---------------------TTAC-------------------------------------------------------CCAAAT--GCGATGCGGTCG---------------------TGSizeHit CountTotal NormTotal
No Reads
droTak1
TAGTTCGCATA--------GAAACGGACAGACGGACAGACGGAC---A-TGACTAGATAGACTCGGCTATTGGTGCTGATCAAGAATAT----ATATACTTTATGTGGTCGGAAACGTCTCCTTCACTG----------CGTTGCAAAC----------------ATC-------TGACTGAAATTATAATACCCTC-------------T----------AC-----AAGGGTATAAAACAA---------TA-AA---------------------------------------------------------------------------------------AA------------G-----------------GGGACTGATAGAATAAATGTTGTC-----------T--------------------------TTTAATAATC---------------------TTTAGTT-----------CAG-----------------------------------------------CGTTACAAAGGTTAGT-------ACCA---CAGASizeHit CountTotal NormTotal
No Reads
droEug1
--------------------------ACAGACGGACAGACGGAC---A-TGGGTATATCGACTCCCCTATTGATCCTGATCAAGAATAT----ATATACTTTATGGGGTCGGAAACGTCTCCTTTGCTG----------CGTTAAAAAC----------------TTC-------TGACCAAAATTATAATACCCTC-------------T----------GC-----AAGGGTATAAAAAGTAATC-----------------------------------ATACGA--------------------------------------------------------------------------------TGGGTGCAT-------------------------TTTTT-----AT----------------------------------------CACTTCTACAAAAGCTAGTTGC-----------CT---------------------------------------TCAGAT----------------------------CAAATTCGCSizeHit CountTotal NormTotal
No Reads
dm3
CGAGAC----------GTTCATATGGACAGTCGGAGAGACGGAT---A-TGGCCAGATCGACTCGGCTATTGATCCTGATCCTGA-TAT----ATATACTTTATATGGTCGGAAACGCTTCCTTCTGCC----------TGTTACA--------------------TT-------TGAACGAATCTAGTATAACCACTTA-------ATCT----------ACGAGTAACGGGTATAAATATA---------GA------------------------------------------------------------------------------------AACAATAATT--------------T-C---------------TTT-----------------TTAATATT----TTCAATTATGTTG------------------AAAAC---------------------TTTCCAA-----------TG----------------------------------------------------GCAGGTAGTC-----------------GTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...................................................................................................TTTATATGGTCGGAAACGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3570000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000200000000000000000000000000000002000000000000000000000
................................................................................................................................................................................................................TCT----------ACGAGTAACGGGTATAA.............................................................................................................................................................................................................................................................................................................................................20200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTCCTTCTGCC----------TGTTACA--------------------TT-------............................................................................................................................................................................................................................................................................................................................................................................................................2060.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AT---A-TGGCCAGATCGACTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GGAT---A-TGGCCAGATCGACTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................TATATGGTCGGAAACGCTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000100000000000000000000002000000000000000000000
...............................................................................................ATACTTTATATGGTCGGAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000001000000000000000000000000000000000000000000000000000000000001000000000000000000002000000000000000000000
....................................................................................................TTATATGGTCGGAAACGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................T----ATATACTTTATATGGTCGGAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................T---A-TGGCCAGATCGACTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................AACGCTTCCTTCTGCC----------TGTTACA--------------------TT-------............................................................................................................................................................................................................................................................................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CT----------ACGAGTAACGGGTATAAA............................................................................................................................................................................................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000
...........................................................................................................GTCGGAAACGCTTCCTTCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000
....................................................................................A-TAT----ATATACTTTATATGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
.................................................................................................ACTTTATATGGTCGGAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000
.......................................................................................................TATGGTCGGAAACGCTTCCTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTATATGGTCGGAAACGCTTCCTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................A-------ATCT----------ACGAGTAACGGGTATA..............................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................TATACTTTATATGGTCGGAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T----ATATACTTTATATGGTCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030000000000000000000000000000000000000000000000000000
................................................................................................TACTTTATATGGTCGGAAACGCTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000002000000000000000010000000000000000000000000
............................................................................................................TCGGAAACGCTTCCTTCTGCC----------................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ACGCTTCCTTCTGCC----------TGTTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
........................................................ATCGACTCGGCTATTGATCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
......................................................................................................ATATGGTCGGAAACGCTTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
......................................................................................TAT----ATATACTTTATATGGTCGGAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ACGAGTAACGGGTATAAATAT.........................................................................................................................................................................................................................................................................................................................................21110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
.......................................CGGAT---A-TGGCCAGATCGACTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACGGAT---A-TGGCCAGATCGACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTA-------ATCT----------ACGAGTAACGGGTC................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................TCT----------ACGAGTAACGGGTATAAATA..........................................................................................................................................................................................................................................................................................................................................23130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TTTATATGGTCGGAAACGCTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000
..............................................................................................TATACTTTATATGGTCGGAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................................................................................................AAACGCTTCCTTCTGCC----------TGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATCGACTCGGCTATTGATCCTGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................CTCGGCTATTGATCCTGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TGGTCGGAAACGCTTCCTTCTGCC----------................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................ATCGACTCGGCTATTGATCCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000001000000000000000000000000000000000000000000
........................................................................................T----ATATACTTTATATGGTCGGAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................CTCGGCTATTGATCCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TACTTTATATGGTCGGAAACGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ATATACTTTATATGGTCGGAAACGCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ACTTTATATGGTCGGAAACGCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
.....................................................CAGATCGACTCGGCTATTGATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................T---A-TGGCCAGATCGACTCGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GAT---A-TGGCCAGATCGACTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................TCT----------ACGAGTAACGGGTATAAATAT.........................................................................................................................................................................................................................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................GCCAGATCGACTCGGCTATTGATCCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AACGCTTCCTTCTGCC----------TGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTATATGGTCGGAAACGCTTCCTTCTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AT----ATATACTTTATATGGTCGGAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ACTTTATATGGTCGGAAACGCTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................A-TGGCCAGATCGACTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................ATACTTTATATGGTCGGAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
....................................................CCAGATCGACTCGGCTATTGATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...................................................GCCAGATCGACTCGGCTATTGATCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATA----------------CGGACGGACAAACAGATAAATGGAC---A-TGTCCAGACCGACTTGGCTAGTGATCCTCTTCAAGAATAT----AAATACGTTTTAGGGTGGAAAACGATACCATCTAAC----------TGTTGCACAC----------------TTT-------TCAACGAATCTCGTATACCCAT-TA-------CTCT----------GGGAGTATAGGGTATAAAATGG---------GT--------------------------------------------------C-----------------------------------------------------------------------------T-----------------TAAATAT-----TT----------------------------------------CAATT-------------GTGC-----------CGGCC---------------------------------------AAACAGAATGGAAGCCATGAGA-----CCTCAA---CAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................TT-------TCAACGAATCTCGTATACCC........................................................................................................................................................................................................................................................................................................................................................................................22105.3053002051000000000000
......................................................................................................................................................................TT-------TCAACGAATCTCGTATAC..........................................................................................................................................................................................................................................................................................................................................................................................20114.6451000051000000000000
......................................................................................................................................................................TT-------TCAACGAATCTCGTATACCCAT-.....................................................................................................................................................................................................................................................................................................................................................................................2411.00100001000000000000
......................................................................................................................................................................TT-------TCAACGAATCTCGTATA...........................................................................................................................................................................................................................................................................................................................................................................................19110.09100000000001000000
......................................................................................................................................................................TT-------TCAACGAATCTCGTATACC.........................................................................................................................................................................................................................................................................................................................................................................................21110.09100000000001000000
......................................................................................................................................................................TT-------TCAACGAATCTCGT..............................................................................................................................................................................................................................................................................................................................................................................................16130.08100000000001000000
.....................................................................................................................................................................TTT-------TCAACGAATCTCGT..............................................................................................................................................................................................................................................................................................................................................................................................17130.08100000000001000000
droSec2
TT-----------------CATACGGACAGACAGACGGATGGACCAAA-TCGCCAGTACGACTCGGCTATTGATCCTGATCAAGAATAT----ATATACTTAATATGGTCCAAAACGCTTTCTTCTACC----------TGTTAC--------------------TTT-------CGAACGAATCGAGTATACCCTTCTA-------CTCA----------ACGAATAACGGGTATAAAAATGTTTT-----------------------------------ACAGAATTT-------------CC-----------------------------------------------------------------------------------TAAATTTGTTA----------------------------------------------------------T-------------TTGC-----------AAACA---TGCCAACTTTGAAGA-----------------CACAGAT----------------------------CAACTGTGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................GACTCGGCTATTGATCCTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010
droYak3
TCATAC----------GGACGGACAGACAGACGGACAGACGGAC---A-TGGTCATATCGACTCGGCTATTGGTCCTGATCAAGAATAT----ATATACTTTATATGGTCGGAAACCCTTCCTTTTGCC----------TGTTACATAC----------------TTT-------TCAACGAATCTAGTATACCCTTTTA-------CTCT----------ACGAGTAACGGGTATAAAAACG---------AA--GCTAT--A----------------------------------------------------------------------------------------------------T--ATGGTAGTA------------------------------TA----TGCTAGTAAAAGGAGTA-----------------CCTTCCCTGCTTG-------------TAGT-----------CGGCG-----------------------------------------------ATGCAGTTG-GAGT-----CATCCC---AGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................GACGGAC---A-TGGTCATATCGACTCGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.25500500000000
.........................................................................................................................................................................................TAGTATACCCTTTTA-------CTCT----------ACGAGT........................................................................................................................................................................................................................................................................................................................................................25200.10202000000000
.............................................................................................................................................................................................ATACCCTTTTA-------CTCT----------ACGAGTAACG....................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
....................................................................ATTGGTCCTGATCAAGAATAT----A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
...TAC----------GGACGGACAGACAGACGGACAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100100000000
.....C----------GGACGGACAGACAGACGGACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05110000000000
................................................................................................................................................................................................CCCTTTTA-------CTCT----------ACGAGTAACG....................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
....................................................TCATATCGACTCGGCTATTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
ATCG----------------AGGCGTTCAGACAGACACACGGAC---G-TGGCCAGAAGGACTCGGCTATTGATCCTGGTCAAGAACAT----A-ATACTTGATATGGTCGGAAACGCTTCCTTCTG-C----------TGTTACATAC----------------TCT-------TCAACGAAGCTAGAACACCCTTTCA-------CTCT----------ACGAGTAGCGGGTATAAATGGA---------AG----------------------------------------------------------------------------------------AAAAA-----------A-----------------GAAAATGGGAAAACGACTGTTGTA-----------AAC-------CAG---------------------AGC-----TGCTCG-------------CTC------------CGTG---------------------------------------A-GTGACCGCTGCAGGTACGA-----------------GCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/18/2015 at 07:04 AM