ID:

dwi_331

 Coordinate:

scf2_1100000004382:746417-746567 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.7 -7.4 -7.3

Flybase annnotation

exon [dwil_GLEANR_10929:1]; CDS [Dwil\GK10727-cds]; intron [Dwil\GK10727-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGAGGCAATTTGCGCCAGCACCGAGAAGGATCTCGAAAAGCCACATTTAGGTGAGTTTTCAAAACTACAATTAAAACTAGTTATAAGTTTTTTAAGTAAAGAAATGCAGAAAAAAAGAAGTGGAAAAACTTTATGACAGAGCTAAAATTTCTCATCATTCTCTACCTGTACAGAAATGAGAAGAAAAATTCATGCATTTAGCTAAATTCTATTAAATAGGACTTTCTTTTTACTCTAACAACTTAGGATAC
*******************************************************************************************************************************....................((((((((..((((.((....)).)))))))))))).******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 V117
male body		 M045
female body
 M020
head
.......ATTTGCGCCAGCACCGAGAAGGATCT.......................................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0
......AATTTGCGCCAGCACCGA................................................................................................................................................................................................................................... 18 0 1 3.00 3 2 1 0 0
.................................................................................................................................................................CTACCTGTACAGAAATGAGAAGA................................................................... 23 0 1 3.00 3 3 0 0 0
.......ATTTGCGCCAGCACCGAGAAGG.............................................................................................................................................................................................................................. 22 0 1 3.00 3 3 0 0 0
..........TGCGCCAGCACCGAGAAGGATCT.......................................................................................................................................................................................................................... 23 0 1 3.00 3 2 1 0 0
........................GAAGGATCTCGAAAAGCC................................................................................................................................................................................................................. 18 0 1 3.00 3 0 0 0 3
.............GCCAGCACCGAGAAGGATCT.......................................................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0
......AATTTGCGCCAGCACCGAGAAGGAT............................................................................................................................................................................................................................ 25 0 1 2.00 2 1 0 1 0
...........GCGCCAGCACCGAGAAGGATCT.......................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0
.........................AAGGATCTCGAAAAGCCACATTTAGG........................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0
.......ATTTGCGCCAGCACCGAGAAGGAT............................................................................................................................................................................................................................ 24 0 1 2.00 2 0 2 0 0
..........TGCGCCAGCACCGAGAAGGAT............................................................................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0
...............................CTCGAAAAGCCACATTTAG......................................................................................................................................................................................................... 19 0 1 2.00 2 1 0 1 0
..........................AGGATCTCGAAAAGCCACATTTAGG........................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
....GCAATTTGCGCCAGCACCGA................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................AAAAATTCATGCATTTAGCT................................................ 20 0 1 1.00 1 1 0 0 0
................AGCACCGAGAAGGATCTCGAAAAG................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
...............................CTCGAAAAGCCACATTTAGGAT...................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0
...................ACCGAGAAGGATCTCGAAAAGC.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0
......AATTTGCGCAAGCACCGAGAAGGATCT.......................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0
...............................CTCGAAAAGCCACATTTAGGA....................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0
...............CAGCACCGAGAAGGATCTCG........................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
......AATTTGCACCAGCACCGAGAAGGATCT.......................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0
........................GAAGGATCTCGAAAAGCCACATTTAG......................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
........TTTGCGCCAGCACCGAGAAGG.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................ACCTGTACAGAAATGAGAAGA................................................................... 21 0 1 1.00 1 1 0 0 0
...........GCGCCAGCACCGAGAAGGATCTCGAA...................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
...............................................................................................................................ACTTTATGACAGAGCTAAAATTTCT................................................................................................... 25 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................TACCTGTACAGAAATGAGAAG.................................................................... 21 0 1 1.00 1 1 0 0 0
......AATTTGCGCCAGCACCGAGAAG............................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.............................................................................................................................AAACTTTATGACAGAGCTAAAAT....................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....CAATTTGCGCCAGCACCGAGAAGGA............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
.........................AAGGATCTCGAAAAGCCACATTTAGGAT...................................................................................................................................................................................................... 28 2 1 1.00 1 0 1 0 0
........TTTGCGCCAGCACCGAGAAGGAT............................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................TACCTGTACAGAAATGAGAAGA................................................................... 22 0 1 1.00 1 0 1 0 0
..AGGCAATTTGCGCCAGCACCGAGAAGG.............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0
........................GAAGGATCTCGAAAAGCCAC............................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
....................................................................................................GAAATGCAGAAAAAAAGAAGTGTAAA............................................................................................................................. 26 1 1 1.00 1 0 1 0 0
.................................CGAAAAGCCACATTTAGG........................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0
..............................................................................................................................AACTTTATGACAGAGCTAAAATT...................................................................................................... 23 0 1 1.00 1 1 0 0 0
....................................................................................................GAAATGCAGAAAAAAAGAAGT.................................................................................................................................. 21 0 1 1.00 1 0 1 0 0
..AGGCAATTTGCGCCAGCACCGAG.................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
................AGCACCGAGAAGGATCTC......................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
......................................................................................................................AGTGGAAAAACTTTATGAC.................................................................................................................. 19 0 1 1.00 1 1 0 0 0
.....CAATTTGCGCCAGCACCGAGAAG............................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
..................CACCGAGAAGGATCTCGAAAAGC.................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................CTGTACAGAAATGAGAAG.................................................................... 18 0 1 1.00 1 1 0 0 0
.............GCCAGCACCGAGAAGGAT............................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................CTACCTGTACAGAAATGAG....................................................................... 19 0 1 1.00 1 1 0 0 0
.............GCCAGCACCGAGAAGGCTCT.......................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0
...............................................................ACTACAATTAAAACTAGTTATAAGT................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..........TGCGCCAGCACCGAGAAGGATCTCG........................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0
.......................................................................................................................................................................GTACAGAAATGAGAAGAAAA................................................................ 20 0 1 1.00 1 1 0 0 0
......AATTTGCGCCAGCACCGAGA................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
......AATTTGCGCCAGCACCGAGAAGGA............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
......AATTTGCGCCAGCACCGAGAAGG.............................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
.......ATTTGCGCCAGCACCGAGA................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
......................................................................................................................................GACAGAGCTAAAATTTCT................................................................................................... 18 0 1 1.00 1 1 0 0 0
.............................ATCTCGAAAAGCCACATTTAGG........................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0
...............................CTAGAAAAGCCACATTTAGGTGA..................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0
........................GAAGGATCTCGAAAAGCCACATTTAGG........................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0
..................................................................................................................................TTATGACAGAGCTAAAATT...................................................................................................... 19 0 1 1.00 1 1 0 0 0
..................................................................................................................................TTATGACAGAGCTAAAATTTCT................................................................................................... 22 0 1 1.00 1 0 1 0 0
..........TGCGCCAGCACCGAGAAGGA............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
..................................GAAAAGCCACATTTAGGAT...................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0
..................................................................................................AAGAAGTGGAGAAAAAAAGAATT.................................................................................................................................. 23 3 13 0.08 1 0 0 1 0

Anti-sense strand reads

CCTCCGTTAAACGCGGTCGTGGCTCTTCCTAGAGCTTTTCGGTGTAAATCCACTCAAAAGTTTTGATGTTAATTTTGATCAATATTCAAAAAATTCATTTCTTTACGTCTTTTTTTCTTCACCTTTTTGAAATACTGTCTCGATTTTAAAGAGTAGTAAGAGATGGACATGTCTTTACTCTTCTTTTTAAGTACGTAAATCGATTTAAGATAATTTATCCTGAAAGAAAAATGAGATTGTTGAATCCTATG
*******************************************************************....................((((((((..((((.((....)).)))))))))))).******************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body
.....GTTCCACGCGGTTGTGGCTC.................................................................................................................................................................................................................................. 20 3 2 0.50 1 1 0
....CCTTACAGGCGGTCGTGGCT................................................................................................................................................................................................................................... 20 3 3 0.33 1 1 0
.......................................................AAAAGTTTTGCTGTGAATTT................................................................................................................................................................................ 20 2 9 0.11 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004382:746367-746617 + dwi_331 GGAGGCAATTTGCGCCAGCACCGAGAAGGATCTCGAAAAGCCACATTTAGGTGAGTTTTCAAAAC--TACAATTAAAACTAGTTAT----AAGTTTTTTAAGTAAAGAAATGCAGAAAAAAAGAAGTGGAAAAACTTTATGACAGAGCTAAAATTTCTCATCATTCTCTACCTGTACAGAAATGAGAAGAAAAATTCATGCATTTAGCTAAATTCTATTAAATAGGACTTTCTTTTTACTCTAACAACTTAGGATAC
droVir3 scaffold_12875:2790032-2790088 + GGAAGCCATTTGTGCGAGTTCCGAAAAGGAACCCGAGAAGCCGCAGTTGGGTAAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6496:22423635-22423692 - GGAAGCTATTTGCTCGAGTTCCGAAAAGGATCCGGAGAAGCCACAGCTGGGTAAGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15112:3375933-3375981 - GGAGGCAATTTGC---------GAGAAGGAGGTCGAGAAGCCGCAATTGGGTAAGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 3:19173325-19173397 + GGAGGCCATTTGTGGGAGCACCGAGAAGGATCTCGAGAAGCCGCCATTAGGTGAGTGCCCA-AAC--TATATTTA----------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_37:174314-174385 + GGAGGCCATTTGTGGGAGCACCGAGAAGGATCTCGAGAAGCCGCCATTAGGTGAGTGCCCA-AAC--TATATTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13266:14041272-14041338 + GGAGGCCATATGTTCGAGTCAGGAAAAGGATCTGGAAAAGCCGGCATTAGGTAAGTTCTTACACT--TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396759:2098209-2098290 - GGAGGCCATTTGTGCGAGTACAGAAAAGGATCTGGAAAAGCCAGCATTAGGTAAGTCCTTAAAAT--TCTAGTTA-TGCTAGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302470:950405-950489 - GGAGGCCATTTGTGCGAGCACTGAGAAGGATCTGGAGAAGCCTCCGCTAGGTGAGTTATACAAAAATGAAATATA-TAATAATTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453851:752924-752983 - GGAGGCCATTTGTGCGAGCACCGAGAAGGATCTGCAGAAGCCAGCTCTTGGTGAGTTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491214:1844027-1844091 + GGAGGCTATTTGTGCCAGCACCGAGAAGGATCTTGAAAAGCCAGCGCTGGGTGAGTTTTCTCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000759425:11610-11675 + GGAGGCCATTTGTGCCAGCACCGAGAAGGATCTGGAGAAGCCAGCACTGGGTGAGTTTCCTTGAC--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301506:1937868-1937928 - GGAGGCCATTTGCGGCAGCACCGAGAAGGATCTGGAGAAGCCAGCCTTGGGTGAGTTTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415866:329472-329531 - GGAGGCCATTTGTGGGAGCACCGAGAAGGATCTGGAGAAGCCAGCATTGGGTGAGTTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409672:2612541-2612612 + GGAGGCCATTTGTGGGAGCACCGAAAAGGATCTGGAGAAGCCAGCATTGGGTGAGTTTGCCTTAC--TACATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2R:12551010-12551069 - GGAGGCGATTTGCGGGAGCACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTAAGTCTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:13223358-13223417 - GGAGGCGATTTGCGGGAGCACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTAAGTTTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_1:10048957-10049016 - GGAGGCGATTTGCGGGAGCACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTAAGTTTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:16430251-16430338 + GGAGGCCATTTGCGGCAGCACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTGAGTTTTCCTATCA-TATATTTA----------TAAAA------------------------------------------------------------------------------------CAGAGAAAT--------------------------------------------------------------------------
droEre2 scaffold_4845:13309142-13309201 + GGAAGCCATTTGCGGGAACACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTGAGTTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GGAGGCAATTTGCGCCAGCACCGAGAAGGATCTCGAAAAGCCACATTTAGGTGAGTTTTCAAAAC--TACAATTAAAACTAGTTAT----AAGTTTTTTAAGTAAAGAAATGCAGAAAAAAAGAAGTGGAAAAACTTTATGACAGAGCTAAAATTTCTCATCATTCTCTACCTGTACAGAAATGAGAAGAAAAATTCATGCATTTAGCTAAATTCTATTAAATAGGACTTTCTTTTTACTCTAACAACTTAGGATACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......ATTTGCGCCAGCACCGAGAAGGATCT................................................................................................................................................................................................................................2614.00400040
......AATTTGCGCCAGCACCGA.........................................................................................................................................................................................................................................1813.00300120
.......................................................................................................................................................................CTACCTGTACAGAAATGAGAAGA...................................................................2313.00300030
.......ATTTGCGCCAGCACCGAGAAGG....................................................................................................................................................................................................................................2213.00300030
..........TGCGCCAGCACCGAGAAGGATCT................................................................................................................................................................................................................................2313.00300120
........................GAAGGATCTCGAAAAGCC.......................................................................................................................................................................................................................1813.00330000
.............GCCAGCACCGAGAAGGATCT................................................................................................................................................................................................................................2012.00200020
......AATTTGCGCCAGCACCGAGAAGGAT..................................................................................................................................................................................................................................2512.00201010
...........GCGCCAGCACCGAGAAGGATCT................................................................................................................................................................................................................................2212.00200020
.........................AAGGATCTCGAAAAGCCACATTTAGG..............................................................................................................................................................................................................2612.00200020
.......ATTTGCGCCAGCACCGAGAAGGAT..................................................................................................................................................................................................................................2412.00200200
..........TGCGCCAGCACCGAGAAGGAT..................................................................................................................................................................................................................................2112.00200020
...............................CTCGAAAAGCCACATTTAG...............................................................................................................................................................................................................1912.00201010
..........................AGGATCTCGAAAAGCCACATTTAGG..............................................................................................................................................................................................................2511.00100010
....GCAATTTGCGCCAGCACCGA.........................................................................................................................................................................................................................................2011.00100010
.............................................................................................................................................................................................AAAAATTCATGCATTTAGCT................................................2011.00100010
................AGCACCGAGAAGGATCTCGAAAAG.........................................................................................................................................................................................................................2411.00100010
...............................CTCGAAAAGCCACATTTAGGAT............................................................................................................................................................................................................2211.00100010
...................ACCGAGAAGGATCTCGAAAAGC........................................................................................................................................................................................................................2211.00100100
...............................CTCGAAAAGCCACATTTAGGA.............................................................................................................................................................................................................2111.00100100
...............CAGCACCGAGAAGGATCTCG..............................................................................................................................................................................................................................2011.00100010
........................GAAGGATCTCGAAAAGCCACATTTAG...............................................................................................................................................................................................................2611.00100100
........TTTGCGCCAGCACCGAGAAGG....................................................................................................................................................................................................................................2111.00100010
.........................................................................................................................................................................ACCTGTACAGAAATGAGAAGA...................................................................2111.00100010
...........GCGCCAGCACCGAGAAGGATCTCGAA............................................................................................................................................................................................................................2611.00100010
.....................................................................................................................................ACTTTATGACAGAGCTAAAATTTCT...................................................................................................2511.00100010
........................................................................................................................................................................TACCTGTACAGAAATGAGAAG....................................................................2111.00100010
......AATTTGCGCCAGCACCGAGAAG.....................................................................................................................................................................................................................................2211.00100010
...................................................................................................................................AAACTTTATGACAGAGCTAAAAT.......................................................................................................2311.00100010
.....CAATTTGCGCCAGCACCGAGAAGGA...................................................................................................................................................................................................................................2511.00100010
.........................AAGGATCTCGAAAAGCCACATTTAGGAT............................................................................................................................................................................................................2811.00100100
........TTTGCGCCAGCACCGAGAAGGAT..................................................................................................................................................................................................................................2311.00100010
........................................................................................................................................................................TACCTGTACAGAAATGAGAAGA...................................................................2211.00100100
..AGGCAATTTGCGCCAGCACCGAGAAGG....................................................................................................................................................................................................................................2711.00100010
........................GAAGGATCTCGAAAAGCCAC.....................................................................................................................................................................................................................2011.00100010
.................................CGAAAAGCCACATTTAGG..............................................................................................................................................................................................................1811.00100010
....................................................................................................................................AACTTTATGACAGAGCTAAAATT......................................................................................................2311.00100010
..........................................................................................................GAAATGCAGAAAAAAAGAAGT..................................................................................................................................2111.00100100
..AGGCAATTTGCGCCAGCACCGAG........................................................................................................................................................................................................................................2311.00100010
................AGCACCGAGAAGGATCTC...............................................................................................................................................................................................................................1811.00100010
............................................................................................................................AGTGGAAAAACTTTATGAC..................................................................................................................1911.00100010
.....CAATTTGCGCCAGCACCGAGAAG.....................................................................................................................................................................................................................................2311.00100010
..................CACCGAGAAGGATCTCGAAAAGC........................................................................................................................................................................................................................2311.00100010
...........................................................................................................................................................................CTGTACAGAAATGAGAAG....................................................................1811.00100010
.............GCCAGCACCGAGAAGGAT..................................................................................................................................................................................................................................1811.00100010
.......................................................................................................................................................................CTACCTGTACAGAAATGAG.......................................................................1911.00100010
...............................................................AC--TACAATTAAAACTAGTTAT----AAGT...................................................................................................................................................................2511.00100010
..........TGCGCCAGCACCGAGAAGGATCTCG..............................................................................................................................................................................................................................2511.00101000
.............................................................................................................................................................................GTACAGAAATGAGAAGAAAA................................................................2011.00100010
......AATTTGCGCCAGCACCGAGA.......................................................................................................................................................................................................................................2011.00100010
......AATTTGCGCCAGCACCGAGAAGGA...................................................................................................................................................................................................................................2411.00100100
......AATTTGCGCCAGCACCGAGAAGG....................................................................................................................................................................................................................................2311.00100010
.......ATTTGCGCCAGCACCGAGA.......................................................................................................................................................................................................................................1911.00100010
............................................................................................................................................GACAGAGCTAAAATTTCT...................................................................................................1811.00100010
.............................ATCTCGAAAAGCCACATTTAGG..............................................................................................................................................................................................................2211.00100010
........................GAAGGATCTCGAAAAGCCACATTTAGG..............................................................................................................................................................................................................2711.00100010
........................................................................................................................................TTATGACAGAGCTAAAATT......................................................................................................1911.00100010
........................................................................................................................................TTATGACAGAGCTAAAATTTCT...................................................................................................2211.00100100
..........TGCGCCAGCACCGAGAAGGA...................................................................................................................................................................................................................................2011.00100010
..................................GAAAAGCCACATTTAGGAT............................................................................................................................................................................................................1920.50100010
droVir3
GGAAGCCATTTGTGCGAGTTCCGAAAAGGAACCCGAGAAGCCGCAGTTGGGTAAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......CATTTGTGCGAGTTCCGAAAA......................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.......ATTTGTGCGAGTTCCGAAAAGGAACCC...............................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...................TCCGAAAAGGAACCCGAGAAGC........................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................AAAAGGAACCCGAGAAGC........................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
.GAAGCCATTTGTGCGAGTT.............................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
.........TTGTGCGAGTTCCGAAAAGGA...................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......ATTTGTGCGAGTTCCGAAAAGG....................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................AAGGAACCCGAGAAGCCGCAGT..................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................CCCGAGAAGCCGCAGTTGG...............................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
..............................ACCCGAGAAGCCGCAGTTGG...............................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
......................GAAAAGGAACCCGAGAAGCCGCAGTTG................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................AAGGAACCCGAGAAGCCGCAGTTGG...............................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
.................................CGAGAAGCCGCAGTTGGGAT............................................................................................................................................................................................................2020.501001000000000000000000000000000000000000000000000000000000000000
..................................GAGAAGCCGCAGTTGGGATG...........................................................................................................................................................................................................2080.252000000010100000000000000000000000000000000000000000000000000000
droMoj3
GGAAGCTATTTGCTCGAGTTCCGAAAAGGATCCGGAGAAGCCACAGCTGGGTAAGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............GAGTTCCGAAAAGGATCCGG..............................................................................................................................................................................................................................2011.001100000
.........................AAGGATCCGGAGAAGCCACAGCTGG...............................................................................................................................................................................................................2511.001100000
......TATTTGCTCGAGTTCCGAAAAGGATCC................................................................................................................................................................................................................................2711.001000001
................................CGGAGAAGCCACAGCTGG...............................................................................................................................................................................................................1811.001100000
droGri2
GGAGGCAATTTGC---------GAGAAGGAGGTCGAGAAGCCGCAATTGGGTAAGTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
GGAGGCCATTTGTGGGAGCACCGAGAAGGATCTCGAGAAGCCGCCATTAGGTGAGTGCCCA-AAC--TATATTTA----------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................GCACCGAGAAGGATCTCGAG............................................................................................................................................................................................................................2013.0030200100000
..................CACCGAGAAGGATCTCGAG............................................................................................................................................................................................................................1912.0020200000000
.......ATTTGTGGGAGCACCGAGAA......................................................................................................................................................................................................................................2012.0020200000000
.........................AAGGATCTCGAGAAGCCGCCATTAGGA.............................................................................................................................................................................................................2712.0020110000000
.................GCACCGAGAAGGATCTCGAGAAGC........................................................................................................................................................................................................................2411.0010100000000
....GCCATTTGTGGGAGCACCGA.........................................................................................................................................................................................................................................2011.0010100000000
..................CACCGAGAAGGATCTCGAGAAGC........................................................................................................................................................................................................................2311.0010100000000
.................GCACCGAGAAGGATCTCGA.............................................................................................................................................................................................................................1911.0010100000000
........................GAAGGATCTCGAGAAGCC.......................................................................................................................................................................................................................1811.0010100000000
..........TGTGGGAGCACCGAGAAGGATCTCGA.............................................................................................................................................................................................................................2611.0010100000000
GGAGGCCATTTGTGGGAGCACCGA.........................................................................................................................................................................................................................................2411.0010100000000
.......ATTTGTGGGAGCACCGAG........................................................................................................................................................................................................................................1811.0010100000000
........................GAAGGATCTCGAGAAGCCGC.....................................................................................................................................................................................................................2011.0010100000000
........................GAAGGATCTCGAGAAGCCGCC....................................................................................................................................................................................................................2111.0010100000000
.................................CGAGAAGCCGCCATTAGGATT...........................................................................................................................................................................................................2120.5010100000000
GGAGGCCATTTGTGGGAG...............................................................................................................................................................................................................................................1820.5010100000000
droPer2
GGAGGCCATTTGTGGGAGCACCGAGAAGGATCTCGAGAAGCCGCCATTAGGTGAGTGCCCA-AAC--TATATTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................ACCGAGAAGGATCTCGAGAAG.........................................................................................................................................................................................................................2112.002200000
......CATTTGTGGGAGCACCGAGAAGGATC.................................................................................................................................................................................................................................2611.001001000
..........................AGGATCTCGAGAAGCCGC.....................................................................................................................................................................................................................1811.001001000
..........TGTGGGAGCACCGAGAAGGATCTCGA.............................................................................................................................................................................................................................2611.001001000
......CATTTGTGGGAGCACCGA.........................................................................................................................................................................................................................................1811.001001000
.......ATTTGTGGGAGCACCGAGAAGGA...................................................................................................................................................................................................................................2311.001000001
.......ATTTGTGGGAGCACCGAGAAGGAT..................................................................................................................................................................................................................................2411.001000001
...............................CTCGAGAAGCCGCCATTAGGATT...........................................................................................................................................................................................................2311.001001000
droAna3
GGAGGCCATATGTTCGAGTCAGGAAAAGGATCTGGAAAAGCCGGCATTAGGTAAGTTCTTACACT--TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................GTCAGGAAAAGGATCTGGAAAAGCC.......................................................................................................................................................................................................................2514.004031000
......CATATGTTCGAGTCAGGAAAAGG....................................................................................................................................................................................................................................2312.002010010
...............GAGTCAGGAAAAGGATCTGGAAAAGC........................................................................................................................................................................................................................2611.001000010
.......................AAAAGGATCTGGAAAAGCCGGC....................................................................................................................................................................................................................2211.001000010
........TATGTTCGAGTCAGGAAAAG.....................................................................................................................................................................................................................................2011.001010000
...................CAGGAAAAGGATCTGGAAAAGCCGGC....................................................................................................................................................................................................................2611.001010000
.....................GGAAAAGGATCTGGAAAAGCC.......................................................................................................................................................................................................................2111.001100000
..........................AGGATCTGGAAAAGCCGGCATT.................................................................................................................................................................................................................2211.001100000
....................AGGAAAAGGATCTGGAAAAGCCGGC....................................................................................................................................................................................................................2511.001010000
......................GAAAAGGATCTGGAAAAGCCGGC....................................................................................................................................................................................................................2311.001010000
...GGCCATATGTTCGAGTCAGG..........................................................................................................................................................................................................................................2011.001010000
........TATGTTCGAGTCAGGAAAAGG....................................................................................................................................................................................................................................2111.001000010
...GGCCATATGTTCGAGTCAGGA.........................................................................................................................................................................................................................................2111.001010000
........TATGTTCGAGTCAGGAAAAGGATCT................................................................................................................................................................................................................................2511.001010000
.......ATATGTTCGAGTCAGGAAA.......................................................................................................................................................................................................................................1911.001000010
..........................AGGATCTGGAAAAGCCGGCATTAGG..............................................................................................................................................................................................................2511.001100000
.............................ATCTGGAAAAGCCGGCATTAGG..............................................................................................................................................................................................................2211.001100000
..............................TCTGGAAAAGCCGGCATTAGG..............................................................................................................................................................................................................2111.001100000
.........................AAGGATCTGGAAAAGCCGGC....................................................................................................................................................................................................................2011.001100000
..................................GAAAAGCCGGCATTAGGA.............................................................................................................................................................................................................1820.501010000
droBip1
GGAGGCCATTTGTGCGAGTACAGAAAAGGATCTGGAAAAGCCAGCATTAGGTAAGTCCTTAAAAT--TCTAGTTA-TGCTAGTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GGAGGCCATTTGTGCGAGCACTGAGAAGGATCTGGAGAAGCCTCCGCTAGGTGAGTTATACAAAAATGAAATATA-TAATAATTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GGAGGCCATTTGTGCGAGCACCGAGAAGGATCTGCAGAAGCCAGCTCTTGGTGAGTTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGAGGCTATTTGTGCCAGCACCGAGAAGGATCTTGAAAAGCCAGCGCTGGGTGAGTTTTCTCAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGAGGCCATTTGTGCCAGCACCGAGAAGGATCTGGAGAAGCCAGCACTGGGTGAGTTTCCTTGAC--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GGAGGCCATTTGCGGCAGCACCGAGAAGGATCTGGAGAAGCCAGCCTTGGGTGAGTTTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GGAGGCCATTTGTGGGAGCACCGAGAAGGATCTGGAGAAGCCAGCATTGGGTGAGTTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GGAGGCCATTTGTGGGAGCACCGAAAAGGATCTGGAGAAGCCAGCATTGGGTGAGTTTGCCTTAC--TACATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GGAGGCGATTTGCGGGAGCACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTAAGTCTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......GATTTGCGGGAGCACGGAGAAG.....................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGCGATTTGCGGGAGCACGGAG........................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACGGAGAAGGATCTGGAGAAG.........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGATTTGCGGGAGCACGGAGAAGG....................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAGGATCTGGAGAAGCCGG.....................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................CGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGGATCTGGAGAAGCCGG.....................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCACGGAGAAGGATCTGGAGA...........................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........TTGCGGGAGCACGGAGAAGGATCT................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GATTTGCGGGAGCACGGA.........................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTTGCGGGAGCACGGAGAAGGA...................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......ATTTGCGGGAGCACGGAGAAGGAT..................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACGGAGAAGGATCTGGAGA...........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......GATTTGCGGGAGCACGGAG........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGGGAGCACGGAGAAGGATCT................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCGGGAGCACGGAGAAG.....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTTGCGGGAGCACGGAGAAGG....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................GGAGAAGGATCTGGAGAAG.........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......GATTTGCGGGAGCACGGAGAAGGA...................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...GGCGATTTGCGGGAGCA.............................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GCCGGCATTGGGTAAGTCTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........TTTGCGGGAGCACGGAGAAGGAT..................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................AAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GATCTGGAGAAGCCGGCAT..................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGCACGGAGAAGGATCTGG..............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................ACGGAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GATTTGCGGGAGCACGG..........................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTGGAGAAGCCGGCATTGGGAT............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGCACGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GGAGGCGATTTGCGGGAGCACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTAAGTTTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........TGCGGGAGCACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................2615.00500000000000005000
........................GAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2112.00200200000000000000
........................GAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................1812.00201100000000000000
................AGCACGGAGAAGGATCTGGAGAAGCCGGCC...................................................................................................................................................................................................................3011.00100000000000001000
..................CACGGAGAAGGATCTGGAGAAGCCGG.....................................................................................................................................................................................................................2611.00100000000000001000
...........GCGGGAGCACGGAGAAGGATCTGGAGAT..........................................................................................................................................................................................................................2811.00100000000000001000
..........................AGGATCTGGAGAAGCCGGCATTGGGA.............................................................................................................................................................................................................2611.00100000000000010000
...................ACGGAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2611.00100000000000001000
......GATTTGCGGGAGCACGGAGAAGG....................................................................................................................................................................................................................................2311.00100010000000000000
..................CACGGAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2711.00101000000000000000
...................ACGGAGAAGGATCTGGAGAAGCCGGCA...................................................................................................................................................................................................................2711.00100000000000001000
........................GAAGGATCTGGAGAAGCCGGCATT.................................................................................................................................................................................................................2411.00100000000000010000
.......................AGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2211.00100100000000000000
.........................AAGGATCTGGAGAAGCCGGCATTGGGA.............................................................................................................................................................................................................2711.00100000000000001000
..................CACGGAGAAGGATCTGGAGA...........................................................................................................................................................................................................................2011.00100010000000000000
................AGCACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................2011.00100010000000000000
......GATTTGCGGGAGCACGGAGAAGGATCTG...............................................................................................................................................................................................................................2811.00100010000000000000
............................GATCTGGAGAAGCCGGCATTGGG..............................................................................................................................................................................................................2311.00101000000000000000
..........................AGGATCTGGAGAAGCCGGCATTGG...............................................................................................................................................................................................................2411.00101000000000000000
.........................AAGGATCTGGAGAAGCCGGCATTGGGAT............................................................................................................................................................................................................2811.00100000000000001000
..................CACGGAGAAGGATCTGGAG............................................................................................................................................................................................................................1911.00101000000000000000
.........TTGCGGGAGCACGGAGAAGGATCT................................................................................................................................................................................................................................2411.00100000000000001000
......................GAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2311.00101000000000000000
....................CGGAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2511.00100000000000001000
........................GAAGGATCTGGAGAAGCCGGCATTGGGA.............................................................................................................................................................................................................2811.00100000000000001000
droSec2
GGAGGCGATTTGCGGGAGCACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTAAGTTTCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......GATTTGCGGGAGCACGGAGAAGG....................................................................................................................................................................................................................................2314.0040310
.............................ATCTGGAGAAGCCGGCATTGGG..............................................................................................................................................................................................................2213.0030210
......GATTTGCGGGAGCACGGAGAAG.....................................................................................................................................................................................................................................2212.0021100
.................GCACGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2512.0020200
........................GAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2112.0020101
.................GCACGGAGAAGGATCTGGAGA...........................................................................................................................................................................................................................2112.0020110
................AGCACGGAGAAGGATCTGGAGAA..........................................................................................................................................................................................................................2311.0010010
.......ATTTGCGGGAGCACGGAGAAGGA...................................................................................................................................................................................................................................2311.0010100
...............................CTGGAGAAGCCGGCATTGGG..............................................................................................................................................................................................................2011.0010010
.....CGATTTGCGGGAGCACGGAG........................................................................................................................................................................................................................................2011.0010010
........................GAAGGATCTGGAGAAGCCGGCATT.................................................................................................................................................................................................................2411.0010100
......GATTTGCGGGAGCACGGAGAAGGA...................................................................................................................................................................................................................................2411.0010100
.................GCACGGAGAAGGATCTGGAG............................................................................................................................................................................................................................2011.0010100
.......ATTTGCGGGAGCACGGAGAA......................................................................................................................................................................................................................................2011.0011000
................................TGGAGAAGCCGGCATTGGGAT............................................................................................................................................................................................................2111.0010100
........................GAAGGATCTGGAGAAGCCGGCATTGGGA.............................................................................................................................................................................................................2811.0010100
.................GCACGGAGAAGGATCTGGAGAA..........................................................................................................................................................................................................................2211.0010100
.................GCACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................1911.0010100
......GATTTGCGGGAGCACGGAGAAGGAT..................................................................................................................................................................................................................................2511.0010010
...........GCGGGAGCACGGAGAAGGAT..................................................................................................................................................................................................................................2011.0010100
....GCGATTTGCGGGAGCACGGAGA.......................................................................................................................................................................................................................................2211.0010100
.......ATTTGCGGGAGCACGGAGAAGGATCT................................................................................................................................................................................................................................2611.0010010
...................ACGGAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2611.0010100
..................CACGGAGAAGGATCTGGAGA...........................................................................................................................................................................................................................2011.0010100
......GATTTGCGGGAGCACGGA.........................................................................................................................................................................................................................................1811.0010010
droYak3
GGAGGCCATTTGCGGCAGCACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTGAGTTTTCCTATCA-TATATTTA----------TAAAA------------------------------------------------------------------------------------CAGAGAAAT--------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...GGCCATTTGCGGCAGCACGGA.........................................................................................................................................................................................................................................2113.00300120000000
...................ACGGAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2612.00210100000000
........................GAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................1812.00210100000000
........................GAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2112.00200100010000
.....................GGAGAAGGATCTGGAGAAGCCGGCATTGG...............................................................................................................................................................................................................2911.00100000010000
.......ATTTGCGGCAGCACGGAGA.......................................................................................................................................................................................................................................1911.00100000010000
.....................GGAGAAGGATCTGGAGAAGC........................................................................................................................................................................................................................2011.00100000010000
.................................................................A-TATATTTA----------TAAAA------------------------------------------------------------------------------------CAGAGA.............................................................................2011.00100000010000
........................GAAGGATCTGGAGAAGCCGGCATTGG...............................................................................................................................................................................................................2611.00100000010000
.........TTGCGGCAGCACGGAGAA......................................................................................................................................................................................................................................1811.00101000000000
...............CAGCACGGAGAAGGATCTGGAGA...........................................................................................................................................................................................................................2311.00101000000000
........................GAAGGATCTGGAGAAGCCGGCATT.................................................................................................................................................................................................................2411.00100000010000
..................CACGGAGAAGGATCTGGAGG...........................................................................................................................................................................................................................2011.00110000000000
...................ACGGAGAAGGATCTGGAGAA..........................................................................................................................................................................................................................2011.00100000010000
...................ACGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2311.00100000010000
.............GGCAGCACGGAGAAGGATCTGGAGAA..........................................................................................................................................................................................................................2611.00100000010000
........TTTGCGGCAGCACGGAGAAGGATCTGG..............................................................................................................................................................................................................................2711.00100100000000
.............GGCAGCACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................2311.00100010000000
.......................AGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................1911.00100100000000
.................GCACGGAGAAGGATCTGGAGA...........................................................................................................................................................................................................................2111.00100100000000
................AGCACGGAGAAGGATCTGGAGA...........................................................................................................................................................................................................................2211.00100000010000
........................GAAGGATCTGGAGAAGCCGGCA...................................................................................................................................................................................................................2211.00100000010000
................AGCACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................2011.00100000010000
......................GAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2311.00100100000000
............................GATCTGGAGAAGCCGGCATTG................................................................................................................................................................................................................2111.00100100000000
droEre2
GGAAGCCATTTGCGGGAACACGGAGAAGGATCTGGAGAAGCCGGCATTGGGTGAGTTTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................AACACGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2614.0040300100
...........................GGATCTGGAGAAGCCGGCATTGGG..............................................................................................................................................................................................................2414.0043100000
..................CACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................1812.0020000020
................AACACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................2012.0020000110
.......ATTTGCGGGAACACGGAGA.......................................................................................................................................................................................................................................1912.0020100100
.........................AAGGATCTGGAGAAGCCGGCATTGGG..............................................................................................................................................................................................................2612.0020100010
............................GATCTGGAGAAGCCGGCATTGG...............................................................................................................................................................................................................2211.0010100000
......CATTTGCGGGAACACGGAGAA......................................................................................................................................................................................................................................2111.0010000100
.......ATTTGCGGGAACACGGAGAAGGAT..................................................................................................................................................................................................................................2411.0010000100
........................GAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2111.0010000010
.................ACACGGAGAAGGATCTGGA.............................................................................................................................................................................................................................1911.0010001000
.......................AGAAGGATCTGGAGAAGCCGGCATTG................................................................................................................................................................................................................2611.0010000100
.................ACACGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2511.0010000100
.....................GGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2111.0010100000
.......ATTTGCGGGAACACGGAGAAG.....................................................................................................................................................................................................................................2111.0010000100
...................ACGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2311.0010100000
...AGCCATTTGCGGGAACACGGAG........................................................................................................................................................................................................................................2211.0010000100
.GAAGCCATTTGCGGGAACACG...........................................................................................................................................................................................................................................2111.0010000010
......................GAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2011.0010001000
......CATTTGCGGGAACACGGAG........................................................................................................................................................................................................................................1911.0010000010
........TTTGCGGGAACACGGAGA.......................................................................................................................................................................................................................................1811.0010001000
......................GAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2311.0010100000
.................ACACGGAGAAGGATCTGGAGAA..........................................................................................................................................................................................................................2211.0010001000
................AACACGGAGAAGGATCTGG..............................................................................................................................................................................................................................1911.0010001000
............................GATCTGGAGAAGCCGGCAT..................................................................................................................................................................................................................1911.0010100000
.GAAGCCATTTGCGGGAACAC............................................................................................................................................................................................................................................2011.0010100000
.........................AAGGATCTGGAGAAGCCGGCATTGGC..............................................................................................................................................................................................................2611.0010100000
.........................AAGGATCTGGAGAAGCCGGCATTGGGA.............................................................................................................................................................................................................2711.0010100000
....................CGGAGAAGGATCTGGAGAAGCC.......................................................................................................................................................................................................................2211.0010100000
.....................GGAGAAGGATCTGGAGAAGCCGGC....................................................................................................................................................................................................................2411.0010000010
...............................CTGGAGAAGCCGGCATTGGGATG...........................................................................................................................................................................................................2320.5010010000

Generated: 05/17/2015 at 10:46 PM