ID:

dwi_3289

 Coordinate:

scf2_1100000004943:5836032-5836182 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.7 -3.1 -3.0 -2.9

Flybase annnotation

exon [dwil_GLEANR_13702:3]; CDS [Dwil\GK13394-cds]; intron [Dwil\GK13394-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCTCTGGAAATTTGCCCGGTGGCACCAAATACCGCCACTTCTCGTACCATGTCTAAATGGACATAACCTAGTGTTGTCTATCCAGACCTGAATAACCCCTAATTAAACACTAATACCCCATAACTCTTCTCTATATGAATAATAATTGAAAATTGATTTAATTTAACAATGAATGTATGACGTTATTCGCTGCTCATCTACATGAATATGATGTGAATTGTTTTTGACTTGACTAATCAACTAATGATCAA
*************************************************************************......((.((....(((((......(((((..............((((...........)))).............))))).....)))))....)).))***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M020
head
 M045
female body
 V117
male body		 V119
head
........................................................................................................................................................................................................................ATTGTTTTTGACTTGACT................. 18 0 1 3.00 3 1 2 0 0 0
.............................................................................................................................................................................................................ATATGATGTGAATTGTTTTTGACT...................... 24 0 1 2.00 2 2 0 0 0 0
.................................................................................................................................................................................................................GATGTGAATTGTTTTTGACTTGACT................. 25 0 1 2.00 2 0 2 0 0 0
...............................................................................................................................................................................................................ATGATGTGAATTGTTTTTGACTT..................... 23 0 1 2.00 2 1 0 0 1 0
.........................................................................TTGTCTATCCAGACCTGAATAACCCCT....................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0
.....................................CTTCTCGTACCATGTCTAAATGGAC............................................................................................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0
.............................................................................................................................................................................................................ATATGATGTGAATTGTTTTT.......................... 20 0 1 1.00 1 1 0 0 0 0
....................................................TTAAATGGACATAACCTAGTGTTGT.............................................................................................................................................................................. 25 1 1 1.00 1 0 0 0 1 0
..............................................................ATAACCTAGTGTTGTCTATCCA....................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
....................................................CTAAATGGACATAACCTAGTGTT................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................ATGATGTGAATTGTTTTTGAC....................... 21 0 1 1.00 1 0 0 0 0 1
.............................................................CATAACCTAGTGTTGTCTATCC........................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................ATGATGTGAATTGTTTTTGACT...................... 22 0 1 1.00 1 0 0 0 0 1
.........................................................................................................................................................TGATTTAATTTAACAATGAAT............................................................................. 21 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................................................................ATATGATGTGAATTGTTTTTG......................... 21 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................ATTCGCTGCTCATCTACATGAATATG......................................... 26 0 1 1.00 1 0 0 1 0 0
................................................................................................CCCTAATTAAACACTAATACCCCATA................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................................TTAACAATGAATGTATGACGTT................................................................... 22 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................GAATATGATGTGAATTGTTTT........................... 21 0 1 1.00 1 0 0 0 1 0
................................................................AACCTAGTGTTGTCTATCCAGA..................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
....................................................CTAAATGGACATAACCTAGTGTTGT.............................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................................................................................TCTGACTTGACTAATCAACT......... 20 1 1 1.00 1 0 0 1 0 0
........................................................................................................................................................................................................CATGAATATGATGTGAATTGTT............................. 22 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................ATTTAACAATGAATGTATGAC...................................................................... 21 0 1 1.00 1 0 1 0 0 0
........................................................................................TGAATAACCCCTAATTAAACACTAATACC...................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0
..........................................................................TGTCTATCCAGACCTGAATAACCCC........................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................GAATGTATGACGTTATTCGCTGCTC........................................................ 25 0 1 1.00 1 1 0 0 0 0
.......................................................AATGGACATAACCTAGGGTTGT.............................................................................................................................................................................. 22 1 1 1.00 1 0 0 0 1 0
.......................................................AATGGACATAACCTAGTGT................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0
.................................................................................................................................................................................TGACGTTATTCGCTGCTCATCTA................................................... 23 0 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................................................................GACTTGACTAATCAACTAATG..... 21 0 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................CTTAACAATGAATGTATGACGTTATT................................................................ 26 1 1 1.00 1 0 0 0 1 0
.....................................................................................................................................................................................GTTATTCGCTGCTCATCTACATGAAT............................................ 26 0 1 1.00 1 0 0 1 0 0
...............................................................TAACCTAGTGTTGTCTATCCAGACCT.................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1
...............................CCGCCACTTCTCGTACCATG........................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
.....................................................TAAATGGACATAACCTAGTGTTGT.............................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0
CCTCTGGAAATTTGCCCGGT....................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0
........................................................................................................................................................................................ATTCTCTGCTCATCTACATGAAT............................................ 23 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................AATGAATGTATGACGTTATTC............................................................... 21 0 1 1.00 1 0 0 1 0 0
....TGGAAATTTGCCCGGTGG..................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
..............................ACCGCCACTTCTCGTACCATGT....................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................ATATGATGTGAATTGTTTT........................... 19 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................................................................................ATGTGAATTGTTTTTGACT...................... 19 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................TTAACAATGAATGTATGAC...................................................................... 19 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................TTGACTTGACTAATCAACTAATG..... 23 0 1 1.00 1 1 0 0 0 0
...............................................................TAACCTAGTGTTGTCTATCCA....................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................CTACATGAATATGATGTGAATTGTTT............................ 26 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................CTTCTCTATATGAATAATAATTGA...................................................................................................... 24 0 1 1.00 1 0 0 1 0 0
..TCTGGAAATTTGCCCGGTGGC.................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................CTCTATATGAATAATAATTGA...................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................................GTATGACGTTATTCGCTGC.......................................................... 19 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................GATGTGAATTGTTTTTGACTTGACC................. 25 1 1 1.00 1 0 1 0 0 0
.................................GCCACTTCTCGTACCATGT....................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................TGTATGACGTTATTCGCTGCT......................................................... 21 0 1 1.00 1 0 1 0 0 0
....................................................................................GACCTGAATAACCCCTAA..................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................TCTCATCTACATGAATAT.......................................... 18 1 3 0.33 1 1 0 0 0 0
..........................................................................................................ATGCTAATACCGCATAAC............................................................................................................................... 18 3 20 0.20 4 0 0 4 0 0

Anti-sense strand reads

GGAGACCTTTAAACGGGCCACCGTGGTTTATGGCGGTGAAGAGCATGGTACAGATTTACCTGTATTGGATCACAACAGATAGGTCTGGACTTATTGGGGATTAATTTGTGATTATGGGGTATTGAGAAGAGATATACTTATTATTAACTTTTAACTAAATTAAATTGTTACTTACATACTGCAATAAGCGACGAGTAGATGTACTTATACTACACTTAACAAAAACTGAACTGATTAGTTGATTACTAGTT
*****************************************************************************......((.((....(((((......(((((..............((((...........)))).............))))).....)))))....)).))************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V119
head
 V118
embryo
 M020
head
 V117
male body		 M045
female body
...................ACCGTGGTTAATGGCGCTGACG.................................................................................................................................................................................................................. 22 3 2 5.00 10 9 1 0 0 0
....................CCGTGGTTAATGGCGCTGACGA................................................................................................................................................................................................................. 22 3 1 3.00 3 2 0 1 0 0
.................CGACCGTGGTTAATGGCGCTGA.................................................................................................................................................................................................................... 22 3 6 2.00 12 7 5 0 0 0
....................CCGTGGTTAATGGCGCTGA.................................................................................................................................................................................................................... 19 2 2 1.00 2 0 2 0 0 0
.....................CGTGGTTAATGGCGCTGAC................................................................................................................................................................................................................... 19 3 15 0.27 4 0 0 4 0 0
....................CCGTGGTTAATGGCGCTG..................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 1 0 0
..........AAAGGGGCCGCGGTGGTTT.............................................................................................................................................................................................................................. 19 3 18 0.06 1 0 0 0 1 0
..........................................GCATGGTAAAGATTCAACT.............................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004943:5835982-5836232 - dwi_3289 CCTCTGGAAATTTGCCCGGTGGCACCAAATACCGCCACTTCTCGTACCATGTCTAAATGGA---CATAACC---------T-------------A-----------------------------------GTGTTGTC---TA--TCCA-G--------ACC--TGAATAACCC-CT-AATT--AAAC---ACTAATACCCCAT-----------AACTCTTCTC--------------------T-----ATAT--------GAATA--------------A--------TA--A-------------------------TTGAA---AATTGATTTAAT-----TTAACAATG------AATG---------------------------------------TA-----TGACGTTATTCGCT-----GCTCATCTACA---TGAAT-----------------------------ATGATGTGAATTGTTTTTGACTT-GACTAATCA--ACTAATGATCAA
droVir3 scaffold_12855:33856-34139 - dvi_3202 CTTCTGGAAACTTGCCCGGTGGCACCAAATACCGTCACTTTTCGTACCATGTCTAGGAA-----AATG-ATTGA----AA-----AAA-GCAATAGAATATATGGTTTA--TGTGGCTCTGAAATTAA-------------------------------------C------------TA-------C---ACTAAACG----ACCCGCTTAAATTGTTA---TAT-ATTATT-ATTGCAACCTG---TTA----------------------------------------------------------------------------------TTTCTAAC--CACATACA----TGCATACACACTC-GTG--TATG------------T----------AAGTA-----TAATGTTT-CTGTAAACTATCTTTT----------------ACCAGAATTGTGTAAATTTTTTGATATTGA---TTTT--ATTTCGATATTAAC------------ATAACTAA
droMoj3 scaffold_6540:2290060-2290315 + dmo_1774 CGACTGGAAACTTGCCTGGCGGCACCAAATACCGTCACTTTTCGTACCATGTCTAAAAGTGAAGATTTTACGAA----AT-----CAA-----TAGCATAAATGGT---------------------------TTATG---TG--GCTA-C--------AACTTATTA-------------------C---ACTAATCG----TTCCGCTAAAATTGTTT---TGTTATTTGT-AATGCAAGTTG---TAA----------------------------------------------------------------------------------TACCTAAC--CAGATACA----------------T-ACG--TA--------------T----------GTACA-----TGATATGT-TTA-T-----ATTATAT---------------ACCGGA--------------------ATTGTGTAAAA--TATTCGAGTT-GACTAA-CATAACTAATAGT---
droGri2 scaffold_14906:13303335-13303631 + CCTCTGGAAATTTGCCCGGTGGCACCAAATACCGCCACTTCTCATACCATGTCTAAACGCA---AATGATT---------TAGACAAAAGCAATCGCATAAATGGTTTATATATGGCTCAAATAATAT-------------------------------------T-------------------TTC---ACTAATCA----CTCCGCCTAAATTGTTT---TATAATTGTTAATCGCAACTAGAAACAA----------------------------------------------------------------------------------CATCTAAC--CAACCACA----TACTTATACACTT-ATA--TG--------------T----------ATGTA-----TGAAGTTTTTTGAT-----ATTGATATTGATATTGTCTATCACCCGAATTGTGTA------------------AAT-----TTTCGAGTT-GACTAA-CATAACTAATAATTAA
dp5 2:17995211-17995480 + CTTCTGGAAACTTACCAGGTGGCACCAAATACCGCCACTTCTCCTATCATGTCTAAACTGT-TG---GCATTCA----AA----T-TATGGAA-----------------------------------------AAGT---TC--TTCA-A--------AGCTGCAAACA---TATT-AA-----------TCTAATACAGCAT-----------TATTT---AA--------------------A-----ATCT------ATAT--------------------------------------------------------CTTTAAATAATCAGCATAAC--CATCTAACTACG----T-AATACGT-ATG--TATG------------TATGTACCTCTGTTAA-----TGATATTT--TGGT-----GCTTGTTTTCA------AT-----------------------------TTGATGTACAC--TTATTGACTCGGACTAATCTTTACTAATGTTCAA
droPer2 scaffold_3:145656-145918 + CTTCTGGAAACTTACCAGGTGGCACCAAATACCGCCACTTCTCTTATCATGTCTAAACTGT-TG---ACATTCA----AA----T-GATGGAA-----------------------------------------AAGT---TC--TTCA-A--------AGCTGCAAACA---TATT-AA-----------TCTAATACAGCAT-----------TATTT---AA--------------------A-----ATTT------ATAT--------------------------------------------------------CTTTAAATAATCAGCATAAC--CATCTAACTACG------TATGTAT-GTA--TGT------------------ACCTCTGTTAA-----TGATATTT--TGGT-----GCTTGTTTTCA------AT-----------------------------TTGATGTACAC--TTATTGACTCGGACTAATCATTACTAATGTTCAA
droAna3 scaffold_13340:6917073-6917332 - dan_2939 CTTCCGGCAACCTGCCGGGCGGAACCCGCTACCGTCACTTCTCCTACCACGTTTAGAA------GCTGCTC---------TA------------------------------------------------------------------------------GCTATG--TT---TTAT-GG-TGTGCCCGATACTAATACGTCAT-----------TGTTT---CG--------------------A-----ATAT------ATATACA----------------TATAT-TTA--TT-A------------------TTTATTT-CAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--TGTAC-----------T----------ATATA-----TGATGTTT-TCGAT-----GCTCGTATTCA------A------------------------------ATGATGTAAAT--GTTTTGACTTGGACTAATCCCCACTAATGACCAA
droBip1 scf7180000396708:1932848-1933108 + CTTCCGGCAACCTGCCGGGCGGAACCCGCTACCGTCACTTCTCCTACCACGTTTAGGA------GCTGCTC---------TA------------------------------------------------------------------------------GCTATG--TG---TTAT-GG-TGTGCCCGATACTAATACGTCAT-----------TGTTT---CG--------------------A-----ATAT------ATATACG----------------TATAT---ATATTTA------------------TTTATTT-CAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--TGTAC-----------T----------ATATA-----TGATGTTT-TCGAT-----GCTCGTATTCA------A------------------------------ATGATGTAAAT--GTTTTGACTTGGACTAATCCCCACTAATGACCAA
droKik1 scf7180000302388:834109-834384 + CCTCCGGCAACCTGCCGGGCGGCACCAAGTACCGTCACTTCTCCTACCACGTTTAGGAT------------TAG----GA----T-GCTGCTG-----------------------------------------ATGT---TC--TCCA-GTGCTCCGGTGCTTTGAATG---TTTTCGG-T--GCCC---ACTAACACGTCAT-----------TGTTT---CG--------------------A-----ATAT------ATATATAT-ATA---------AAT--CTATTATA------------------------TCCTTCGAATAATCCACTTAACCACCGCTAACCTTG------AGTGCCT-ATA--TA--------------T----------GTATA-----CGATGCT---CGA------------ATTCA------------------------------------GATGATGTAAAT--GTTTTGACTTGGACTAATCACCACTAATGACCAC
droFic1 scf7180000454104:254623-254909 - CCAGTGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTCTAGGC--------TGCTC---------CAGGT-GCTGGATCG-----------------------------------GGAGCGTT---TG--CCCA-C--------GGCTTTCAATG---TTAT-GG-T--GCCC---ACTAATACGTCATTC---------TGTTT---CG--------------------A-----ATAT------ACATATACTATA-----------T-------ATATTTAATACCTATATACATAATGTTTATTTGAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--T--------------------------GTATT-----CGATGCTA-CCGA-------------------------------------------------------TGATGTAATT--GTTTTGACTTGGACTAATCACCACTAATGACCAA
droEle1 scf7180000486474:862430-862686 - CCTCCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGAAT-----GATGTAGTGC----AT-----C-----------------------------------------------------------TCCATT--------TGCTTTGAATTATGTTAT-GG-T--GCCC---GCTAATGCGTCAT-----------TGTCT---CG--------------------AAACAG-CAT------ATATATA----------------TATAT-CTA--C-------------------------CTTGAAATAATCCCCTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--T--------------------------GTATACGTTATGATGTTC-CCGA-------------------------------------------------------TGATGTATTT--GTTTTGACTTGGACTAATCACCACTAATGACCAA
droRho1 scf7180000780140:150270-150532 - CCTCCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGG--------ATGCACTGCATCCAT-----CAGCGGATCG-----------------------------------GGAGCGGT---CG--CCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTCT---CG--------------------A-----ACCAATAT--ATATATA---T-------------------TA--C-------------------------TTTGAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--T--------------------------GTATA-----CGATGTTT-CCGA-------------------------------------------------------TGATGTATTT--GTTTTGACTTGGACTAATCACCACTAATGACCAA
droBia1 scf7180000302402:8734515-8734821 - CCTCCGGCAGCCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGGTTGC-CGGATGCACTGC----AT-----CGGCGGATCG---------GATGA--GGCGGCGCCGGCAGCGGCGGCGTCGGT---TG--CCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTT---TG--------------------A-----ATATATA-----ATATAC-ACA-----------CATAT-TTA--------------------------TATTTCAAATAATCCACCTAAC--ACGCTAACCTTG------AGTGCCC-ATG--TATA------------T----------GTATA-----CGATGTTT-CCGAT-----GAT--------------------------------------------GATGATGTATTT--GTTTTGACTTGGACTAATCCCCACTAATGACCAA
droTak1 scf7180000415653:399486-399764 + CCTCCGGCAACCTGCCCGGCGGCACCAAGTACCGTCACTTCTCCTACCACGTGTAGG--------ATGCACTGC----GT-----CAGCGGATCG-----------------------------------GC--------------CAG-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTTCTTTG--------------------A-----ATAT------ATATTCAG-ATAATTCAGATAAAT--AT-A----------------------------TATTTCAAGTAATCCACTTAAC--ACGCTAACCTTG------AGTGCCT-ATG--TATA------------T----------GTATA-----CGATGTTT-CCGAT-----GATGAT-----------------------------------------GATGATGTATTT--GTTTTGACTTGGACTAATCCCCACTAATGACCAA
droEug1 scf7180000409797:211895-212176 - CTTCCGGCAACCTGCCCGGCGGCACCAAATACCGTCACTTCTCCTACCACGTGTAGG--------ATGCACTGC----AT-----CAGCGGAACG-----------------------------------GCAGCGGCAATTG--GCCA-C--------TGCTTTGAATGTTATTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTT---TG--------------------A-----ATAT------ATATATA--------------TAT--AT-ATACATTTA------------------TATATACCAAATAATCCACTTAACAACCGCTAACCTTG------AGTGCCT-ATA--TA--------------T----------GTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTATTT--GTTTTGACTTGGACTAATCCCCACTAATGACCAA
dm3 chr3R:6599184-6599475 - CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGGA------GACGCACAGC----GT-----CAAAGGATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----ATTTATATATATATA-----TA---------AAT--AT-ATACATT------------------------TTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCC-ATA--TATATATA--------T--ATATATTTGTATA-----CGAAGTTT-TCAAT----------------------------------------------------GATGATGTATTTTCGTTTTGACTTGGACTAATCACCACTAATGCCCAA
droSim2 3r:14475148-14475429 + CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGTCACTTCTCCTACCACGTGTAGGG------GACGCACTGC----GT-----CAAAGGATCG-----------------------------------GCGTCGTC---TG--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----CTAT------ATATATA---TA---------AAT--AT-ATACATT------------------------TTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCC-ATT--TATAT----------------ATATTTGTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGTTTTGACTTGGACTAATCACCACTAATGCCCAA
droSec2 scaffold_0:15342494-15342773 + CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGTCACTTCTCCTACCACGTGTAGGG------GACGCACTGC----GT-----CAAAGGATCG-----------------------------------GCGTCGTC---TG--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----CTAT------ATATATA--------------AAT--AT-ATACATT------------------------TTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCC-ATT--TATAT----------------ATATTTGTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGTTTTGACTTGGACTAATTACCACTAATGCCCAA
droYak3 3R:10640389-10640683 - dya_998 CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGGATGCACTGATGCACTGC----GT-----CAATGGATCG-----------------------------------GCGTCGGC---TG--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----ATAT------ATATATA--------------AAT--AT-ATACATT----------------------TTTTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCCCATATTTATA--TTCATATGTAT----------GTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGTTTTGACTTGGACTAATCACCACTAATGACCAA
droEre2 scaffold_4770:15003963-15004238 + der_637 CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGG--------ATGCACTGC----GC-----CAATGGATCG-----------------------------------GCGTCGGC---TGCGTCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----ATAT------ATATA----------------ACT--AT-ATACATT------------------------TTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCG-ATA--TATACATA--------T----------ATATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTACTTTCGTTTTGACTTGGACTAATCACCACTAATGACCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CCTCTGGAAATTTGCCCGGTGGCACCAAATACCGCCACTTCTCGTACCATGTCTAAATGGA---CATAACC---------T-------------A-----------------------------------GTGTTGTC---TA--TCCA-G--------ACC--TGAATAACCC-CT-AATT--AAAC---ACTAATACCCCAT-----------AACTCTTCTC--------------------T-----ATAT--------GAATA--------------A--------TA--A-------------------------TTGAA---AATTGATTTAAT-----TTAACAATG------AATG---------------------------------------TA-----TGACGTTATTCGCT-----GCTCATCTACA---TGAAT-----------------------------ATGATGTGAATTGTTTTTGACTT-GACTAATCA--ACTAATGATCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTTTTGACTT-GACT...................1813.00320010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------------ATGATGTGAATTGTTTTTGACT.........................2412.00200020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAATTGTTTTTGACTT-GACT...................2512.00220000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGTGAATTGTTTTTGACTT-.......................2312.00200110
.....................................................................................................................................TTGTC---TA--TCCA-G--------ACC--TGAATAACCC-CT-...........................................................................................................................................................................................................................................................................................................................................................2712.00220000
.....................................CTTCTCGTACCATGTCTAAATGGA---C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------------ATGATGTGAATTGTTTTT.............................2011.00100010
.................................................................ATAACC---------T-------------A-----------------------------------GTGTTGTC---TA--TCCA-.......................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
....................................................CTAAATGGA---CATAACC---------T-------------A-----------------------------------GTGTT......................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGTGAATTGTTTTTGAC..........................2111.00100001
................................................................CATAACC---------T-------------A-----------------------------------GTGTTGTC---TA--TCC.........................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGTGAATTGTTTTTGACT.........................2211.00100001
............................................................................................................................................................................................................................................................................................................................................TGATTTAAT-----TTAACAATG------AAT.................................................................................................................................................................2111.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------------ATGATGTGAATTGTTTTTG............................2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCT-----GCTCATCTACA---TGAAT-----------------------------ATG............................................2611.00101000
............................................................................................................................................................................CC-CT-AATT--AAAC---ACTAATACCCCAT-----------A.....................................................................................................................................................................................................................................................................................................................2611.00101000
..........................................................................................................................................................................................................................................................................................................................................................TTAACAATG------AATG---------------------------------------TA-----TGACGTT...........................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAT-----------------------------ATGATGTGAATTGTTTT..............................2111.00100100
...................................................................AACC---------T-------------A-----------------------------------GTGTTGTC---TA--TCCA-G--------A.............................................................................................................................................................................................................................................................................................................................................................................2211.00100010
....................................................CTAAATGGA---CATAACC---------T-------------A-----------------------------------GTGTTGT....................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---TGAAT-----------------------------ATGATGTGAATTGTT................................2211.00100010
...................................................................................................................................................................................................................................................................................................................................................AT-----TTAACAATG------AATG---------------------------------------TA-----TGAC..............................................................................................................2111.00110000
....................................................................................................................................................................TGAATAACCC-CT-AATT--AAAC---ACTAATACC.....................................................................................................................................................................................................................................................................................................................................2911.00110000
......................................................................................................................................TGTC---TA--TCCA-G--------ACC--TGAATAACCC-C.............................................................................................................................................................................................................................................................................................................................................................2511.00110000
..................................................................................................................................................................................................................................................................................................................................................................G------AATG---------------------------------------TA-----TGACGTTATTCGCT-----GCTC...........................................................................................2511.00100010
.......................................................AATGGA---CATAACC---------T-------------A-----------------------------------GTGT.......................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGACGTTATTCGCT-----GCTCATCTA......................................................................................2311.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTT-GACTAATCA--ACTAATG.....2111.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTCGCT-----GCTCATCTACA---TGAAT-----------------------------...............................................2611.00101000
..................................................................TAACC---------T-------------A-----------------------------------GTGTTGTC---TA--TCCA-G--------ACC--T........................................................................................................................................................................................................................................................................................................................................................................2611.00100001
...............................CCGCCACTTCTCGTACCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
.....................................................TAAATGGA---CATAACC---------T-------------A-----------------------------------GTGTTGT....................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
CCTCTGGAAATTTGCCCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...............................................................................................................................................................................................................................................................................................................................................................AATG------AATG---------------------------------------TA-----TGACGTTATTC.......................................................................................................2111.00101000
....TGGAAATTTGCCCGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............................ACCGCCACTTCTCGTACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------------ATGATGTGAATTGTTTT..............................1911.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAATTGTTTTTGACT.........................1911.00110000
..........................................................................................................................................................................................................................................................................................................................................................TTAACAATG------AATG---------------------------------------TA-----TGAC..............................................................................................................1911.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTT-GACTAATCA--ACTAATG.....2311.00100010
..................................................................TAACC---------T-------------A-----------------------------------GTGTTGTC---TA--TCCA-.......................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACA---TGAAT-----------------------------ATGATGTGAATTGTTT...............................2611.00100010
...........................................................................................................................................................................................................................CTTCTC--------------------T-----ATAT--------GAATA--------------A--------TA--A-------------------------TTGA........................................................................................................................................................................................................2411.00101000
..TCTGGAAATTTGCCCGGTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..............................................................................................................................................................................................................................CTC--------------------T-----ATAT--------GAATA--------------A--------TA--A-------------------------TTGA........................................................................................................................................................................................................2111.00101000
............................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------TA-----TGACGTTATTCGCT-----GC.............................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAATTGTTTTTGACTT-GACC...................2511.00110000
.................................GCCACTTCTCGTACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------TA-----TGACGTTATTCGCT-----GCT............................................................................................2111.00110000
......................................................................................................................................................G--------ACC--TGAATAACCC-CT-AA.........................................................................................................................................................................................................................................................................................................................................................1811.00110000
droVir3
CTTCTGGAAACTTGCCCGGTGGCACCAAATACCGTCACTTTTCGTACCATGTCTAGGAA-----AATG-ATTGA----AA-----AAA-GCAATAGAATATATGGTTTA--TGTGGCTCTGAAATTAA-------------------------------------C------------TA-------C---ACTAAACG----ACCCGCTTAAATTGTTA---TAT-ATTATT-ATTGCAACCTG---TTA----------------------------------------------------------------------------------TTTCTAAC--CACATACA----TGCATACACACTC-GTG--TATG------------T----------AAGTA-----TAATGTTT-CTGTAAACTATCTTTT----------------ACCAGAATTGTGTAAATTTTTTGATATTGA---TTTT--ATTTCGATATTAAC------------ATAACTAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................CACACTC-GTG--TATG------------T----------AAGT........................................................................................................................1913.003003000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATTGTGTAAATTTTTTGAT................................................2213.003000000000000000002000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CTAAC--CACATACA----TGCATACA..................................................................................................................................................................2113.003000000000000001001100000000000000000000000000000000000000000000
..TCTGGAAACTTGCCCGGTGGCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003020000000000000000000000000000000000000000000000000000000010000
..................................................................................................TATATGGTTTA--TGTGGCTCTGAAATTAA-------------------------------------C------------TA-------C---A.............................................................................................................................................................................................................................................................................................................................................3312.002000000000000000000000000000000000000000000000000000000000020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTT----------------ACCAGAATTGTGTAA..........................................................2012.002000000000000000000100000000000000000000100000000000000000000000
...........................................GTACCATGTCTAGGAA-----AAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000001000000000001000000000000000000000000000000000
............................................................................................ATAGAATATATGGTTTA--TGTGGCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTCTAAC--CACATACA----TGCATAC...................................................................................................................................................................2212.002000000000000000002000000000000000000000000000000000000000000000
.................................................................................................ATATATGGTTTA--TGTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................1812.002001000000000000000000000000001000000000000000000000000000000000
..................................................................................................TATATGGTTTA--TGTGGCTCTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................TG---TTA----------------------------------------------------------------------------------TTTCTAAC--CACATACA----TGCATAC...................................................................................................................................................................2811.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................TATGGTTTA--TGTGGCTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................ATATATGGTTTA--TGTGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TATG------------T----------AAGTA-----TAATGTTT-C........................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000001
.TTCTGGAAACTTGCCCGGTGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
...............................................CATGTCTAGGAA-----AATG-ATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
...................................................................G-ATTGA----AA-----AAA-GCAATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................C------------TA-------C---ACTAAACG----ACCCGCTTA.........................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATACACACTC-GTG--TATG------------T----------AAGTA-----TAATGT............................................................................................................2911.001000000000000000000000000000000000000000000000000000000000001000
.......................ACCAAATACCGTCACTTTTCGTACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................ACG----ACCCGCTTAAATTGTTA---TAT-..........................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................TCTGAAATTAA-------------------------------------C------------TA-------C---ACT...........................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ATTATT-ATTGCAACCTG---TTA----------------------------------------------------------------------------------TTTCT...........................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................A----------------------------------------------------------------------------------TTTCTAAC--CACATACA----TGCATA....................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
...........................................GTACCATGTCTAGGAA-----AATG-ATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................................TGTCTAGGAA-----AATG-ATTGA----AA-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
............................................................................................................................................................................................................................................................................................................................................................ACA----TGCATACACACTC-GTG--TATG------------T----------AA..........................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................ATATATGGTTTA--TGTGGCTCTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAACTATCTTTT----------------ACCAGA...................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................ATATGGTTTA--TGTGGCTCTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CTAAC--CACATACA----TGCATAC...................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TGCAACCTG---TTA----------------------------------------------------------------------------------TTTCTAAC--CAC...................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
CTTCTGGAAACTTGCCCGGTGGCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
...................................................................G-ATTGA----AA-----AAA-GCAATAGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTGTAAATTTTTTGAT................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................CCGTCACTTTTCGTACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................ATTGCAACCTG---TTA----------------------------------------------------------------------------------TTTCT...........................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................GGCTCTGAAATTAA-------------------------------------C------------TA-------C---ACT...........................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........TTGCCCGGTGGCACCAAATACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................A---TAT-ATTATT-ATTGCAACCTG---T....................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTGTAAATTTTTTGATAT..............................................2311.001000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................A---TAT-ATTATT-ATTGCAACCTG---TTA----------------------------------------------------------------------------------TTTCT...........................................................................................................................................................................................2911.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGA---TTTT--ATTTCGATATTAAC------------ATAACT..2911.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AT-ATTATT-ATTGCAACCTG---TTA----------------------------------------------------------------------------------T...............................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------------ACCAGAATTGTGTAAAT........................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................AGAATATATGGTTTA--TGTGGCTCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
..................................................GTCTAGGAA-----AATG-ATTGA----AA-----AAA-GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................AA-------------------------------------C------------TA-------C---ACTAAACG----ACCCGCTTA.........................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
................................................ATGTCTAGGAA-----AATG-ATTGA----AA-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................................G------------T----------AAGTA-----TAATGTTT-CTGTAA...................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.........................................TCGTACCATGTCTAGGAA-----AATG-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
.................................................TGTCTAGGAA-----AATG-ATTGA----AA-----AAA-GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTATCTTTT----------------ACCAGAATTGTGT............................................................2511.001000000000000000000000010000000000000000000000000000000000000000
........................................TTCGTACCATGTCTAGGAA-----AAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................ATATGGTTTA--TGTGGCTCTGAAAT................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGA---TTTT--ATTTCGATATTAAC------------........2311.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GCAACCTG---TTA----------------------------------------------------------------------------------TTTCTAAC--CAC...................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ATTGCAACCTG---TTA----------------------------------------------------------------------------------TTTCTAAC--CACATA................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
..TCTGGAAACTTGCCCGGTGGCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-CTGTAAACTATCTTTT----------------ACCAGA...................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...................................................TCTAGGAA-----AATG-ATTGA----AA-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................A-----TAATGTTT-CTGTAAACTAT..............................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.............................................ACCATGTCTAGGAA-----AATG-ATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TT-ATTGCAACCTG---TTA----------------------------------------------------------------------------------TTTCTAAC--......................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CTAAC--CACATACA----TGCATA....................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..TCTGGAAACTTGCCCGGTGGCACCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
....................................................CTAGGAA-----AATG-ATTGA----AA-----AAA-GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTAAATTTTTTGAT................................................1911.001000000000000001000000000000000000000000000000000000000000000000
...........................................GTACCATGTCTAGGAA-----AA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ATTGCAACCTG---TTA----------------------------------------------------------------------------------TTTCTAAC--CACAT.................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................CTGAAATTAA-------------------------------------C------------TA-------C---ACTAAAC.......................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAATTGTGTAAATTTTTTGAT................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGA---TTTT--ATTTCGATAT........................1911.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................TATGGTTTA--TGTGGCTCTGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTTTTGATATTGA---TTTT--ATT...............................2411.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTA-----TAATGTTT-CTGTAAACTATCT............................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
................................................ATGTCTAGGAA-----AATG-ATTGA----A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................TTTA--TGTGGCTCTGAAATTAA-------------------------------------........................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
CGACTGGAAACTTGCCTGGCGGCACCAAATACCGTCACTTTTCGTACCATGTCTAAAAGTGAAGATTTTACGAA----AT-----CAA-----TAGCATAAATGGT---------------------------TTATG---TG--GCTA-C--------AACTTATTA-------------------C---ACTAATCG----TTCCGCTAAAATTGTTT---TGTTATTTGT-AATGCAAGTTG---TAA----------------------------------------------------------------------------------TACCTAAC--CAGATACA----------------T-ACG--TA--------------T----------GTACA-----TGATATGT-TTA-T-----ATTATAT---------------ACCGGA--------------------ATTGTGTAAAA--TATTCGAGTT-GACTAA-CATAACTAATAGT---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................C--------AACTTATTA-------------------C---ACTAATCG----TTCCGCTAAA........................................................................................................................................................................................................................................................................................................................2912.002200000
..............................................................................AT-----CAA-----TAGCATAAATGGT---------------------------T.......................................................................................................................................................................................................................................................................................................................................................................................................1912.002100010
.........................................................................................................................................................................................................................................................AA----------------------------------------------------------------------------------TACCTAAC--CAGATACA----------------T-ACG--T......................................................................................................................................................2312.002000011
..............................................................................................AGCATAAATGGT---------------------------TTATG---TG--GCTA-C--------..............................................................................................................................................................................................................................................................................................................................................................................2411.001000010
......GAAACTTGCCTGGCGGCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................................TACCATGTCTAAAAGTGAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................AATGGT---------------------------TTATG---TG--GCTA-C--------AACTTAT.......................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...................................................................................................................................................................................................................................................TG---TAA----------------------------------------------------------------------------------TACCTAAC--CAGATACA----------------T-ACG--TA--------------T----------............................................................................................................................2811.001100000
.GACTGGAAACTTGCCTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAGTT-GACTAA-CATAACTAATAGT---2811.001000001
.................................................................................................ATAAATGGT---------------------------TTATG---TG--GCTA-C--------AACTT.........................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..................................................................TTTACGAA----AT-----CAA-----TAGCATAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...................................................................................................................................................................TATTA-------------------C---ACTAATCG----TTCCGCTAAAATTGT...................................................................................................................................................................................................................................................................................................................2911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT---------------ACCGGA--------------------ATTGTGTAAAA--T.................................2211.001000001
.............................................ACCATGTCTAAAAGTGAAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
CGACTGGAAACTTGCCTGGCGGCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....GGAAACTTGCCTGGCGGCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................TGTTT---TGTTATTTGT-AATGCAAGTT.........................................................................................................................................................................................................................................................................................2511.001100000
CGACTGGAAACTTGCCTGGCGGCACCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAAAA--TATTCGAGTT-G......................1911.001100000
...................................................................................................................................................................................................................................ATTTGT-AATGCAAGTTG---TAA----------------------------------------------------------------------------------T...............................................................................................................................................................................................2111.001100000
........AACTTGCCTGGCGGCACCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................TTATG---TG--GCTA-C--------AACTTATTA-------------------C---ACT...........................................................................................................................................................................................................................................................................................................................................2511.001100000
..................................................................TTTACGAA----AT-----CAA-----TAGCATAAATGGT---------------------------........................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................AAC--CAGATACA----------------T-ACG--TA--------------T----------GT..........................................................................................................................2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT---------------ACCGGA--------------------ATTGTGTAAAA--TATTCGA...........................2911.001100000
.................GGCGGCACCAAATACCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......................................................................CGAA----AT-----CAA-----TAGCATAAATGGT---------------------------........................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAT---------------ACCGGA--------------------ATTGTGT........................................2011.001100000
.......................................................................................................................................................................................................................................GT-AATGCAAGTTG---TAA----------------------------------------------------------------------------------TACCTAAC--CA....................................................................................................................................................................................2611.001000001
...........................AATACCGTCACTTTTCGTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................................................................TTTTACGAA----AT-----CAA-----TAGCATAAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................AAATACCGTCACTTTTCGTACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
..............................................................................................................................................G--GCTA-C--------AACTTATTA-------------------C---ACTAATCG----TTC...............................................................................................................................................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------ACCGGA--------------------ATTGTGTAAAA--TATTCGAGTT-.......................2911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------ATTGTGTAAAA--TATTCGAGTT-GACTAA-C...............2911.001100000
......................................................................................................................................................................................................G----TTCCGCTAAAATTGTTT---TGT...........................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................A-T-----ATTATAT---------------ACCGGA--------------------ATTGTGT........................................2211.001000010
............................................TACCATGTCTAAAAGTGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................CATGTCTAAAAGTGAAGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................AACTTATTA-------------------C---ACTAATCG----TTCCGCT...........................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................ATTGTTT---TGTTATTTGT-AAT................................................................................................................................................................................................................................................................................................2011.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAA--TATTCGAGTT-GACTAA-CATAAC..........2811.001100000
...............CTGGCGGCACCAAATACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droGri2
CCTCTGGAAATTTGCCCGGTGGCACCAAATACCGCCACTTCTCATACCATGTCTAAACGCA---AATGATT---------TAGACAAAAGCAATCGCATAAATGGTTTATATATGGCTCAAATAATAT-------------------------------------T-------------------TTC---ACTAATCA----CTCCGCCTAAATTGTTT---TATAATTGTTAATCGCAACTAGAAACAA----------------------------------------------------------------------------------CATCTAAC--CAACCACA----TACTTATACACTT-ATA--TG--------------T----------ATGTA-----TGAAGTTTTTTGAT-----ATTGATATTGATATTGTCTATCACCCGAATTGTGTA------------------AAT-----TTTCGAGTT-GACTAA-CATAACTAATAATTAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
CTTCTGGAAACTTACCAGGTGGCACCAAATACCGCCACTTCTCCTATCATGTCTAAACTGT-TG---GCATTCA----AA----T-TATGGAA-----------------------------------------AAGT---TC--TTCA-A--------AGCTGCAAACA---TATT-AA-----------TCTAATACAGCAT-----------TATTT---AA--------------------A-----ATCT------ATAT--------------------------------------------------------CTTTAAATAATCAGCATAAC--CATCTAACTACG----T-AATACGT-ATG--TATG------------TATGTACCTCTGTTAA-----TGATATTT--TGGT-----GCTTGTTTTCA------AT-----------------------------TTGATGTACAC--TTATTGACTCGGACTAATCTTTACTAATGTTCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................CTATCATGTCTAAACTGT-TG---GC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
...............................................................................................................................................................................................................................AA--------------------A-----ATCT------ATAT--------------------------------------------------------CTTTAAATAATCAGC.............................................................................................................................................................................................2611.0010010000000
........................................................................................................................................GT---TC--TTCA-A--------AGCTGCAAACA---................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTACAC--TTATTGACTCGGACTA..................2611.0010000001000
............................................................................................................................................................................................................................................................................................................................................CAGCATAAC--CATCTAACTA............................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTGTTAA-----TGATATTT--TGGT-----GCTTGTC........................................................................................2611.0010010000000
....................................................................................................................................................................................................TACAGCAT-----------TATTT---AA--------------------A-----ATCT------A.......................................................................................................................................................................................................................................................................2111.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------TTGATGTACAC--TTATTGACTCGGACT...................2711.0010000001000
....................................................CTAAACTGT-TG---GCATTCA----AA----T-TATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAC--TTATTGACTCGGA.....................1911.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACTCGGACTAATCTTTA...........2111.0011000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC--TTATTGACTCGGACTAATCTT.............2411.0010000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACTAATCTTTACTAATGTTC..2311.0011000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TT--TGGT-----GCTTGTTTTCA------AT-----------------------------TT.............................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGGT-----GCTTGTTTTCA------AT-----------------------------TTGATGT........................................2511.0010100000000
..................................................................................................................................................................................AA-----------TCTAATACAGCAT-----------TATTT---..............................................................................................................................................................................................................................................................................................................2011.0010000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------------TTGATGTACAC--TTATTGACTCGGACT...................2811.0010010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AA-----TGATATTT--TGGT-----GCTTGT.........................................................................................2011.0010010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGACTCGGACTAATCTT.............2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................ATCAGCATAAC--CATCTAACT.............................................................................................................................................................................2011.0010010000000
.......................ACCAAATACCGCCACTTCTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................ACAGCAT-----------TATTT---AA--------------------A-----ATC...............................................................................................................................................................................................................................................................................1811.0010001000000
droPer2
CTTCTGGAAACTTACCAGGTGGCACCAAATACCGCCACTTCTCTTATCATGTCTAAACTGT-TG---ACATTCA----AA----T-GATGGAA-----------------------------------------AAGT---TC--TTCA-A--------AGCTGCAAACA---TATT-AA-----------TCTAATACAGCAT-----------TATTT---AA--------------------A-----ATTT------ATAT--------------------------------------------------------CTTTAAATAATCAGCATAAC--CATCTAACTACG------TATGTAT-GTA--TGT------------------ACCTCTGTTAA-----TGATATTT--TGGT-----GCTTGTTTTCA------AT-----------------------------TTGATGTACAC--TTATTGACTCGGACTAATCATTACTAATGTTCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTCGGACTAATCATTACTAAT......2512.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCGGACTAATCATTACTAAT......2312.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAC--TTATTGACTCGGA.....................1912.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCGGACTAATCATTACTA........2112.002200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTGACTCGGACTAATC...............1912.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----------------------------TTGATGTACAC--TTATTGACTCGG......................2512.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAC--TTATTGACTCGGACT...................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAC--TTATTGACTCGGACTAATC...............2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGACTAATCATTACTAAT......2211.001100000
..................................................................................................................................................................................................................................................................................................................................................AAC--CATCTAACTACG------TATGTAT-............................................................................................................................................................2211.001001000
.........................................................................A----AA----T-GATGGAA-----------------------------------------AAGT---TC--TTCA-.......................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
..........................................................................................GAA-----------------------------------------AAGT---TC--TTCA-A--------AGCTGC........................................................................................................................................................................................................................................................................................................................................................................2011.001001000
................................................................................................................................................................................................................................................................................................................................................ATAAC--CATCTAACTACG------TATGT...............................................................................................................................................................2211.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--TTATTGACTCGGACTAAT................2011.001000100
....................................................................................T-GATGGAA-----------------------------------------AAGT---TC--TTCA-A--------AGCT..........................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTCGGACTAATCATTACT.........2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................ATGTAT-GTA--TGT------------------ACCTCTGTTAA-----TGAT..............................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAC--TTATTGACTCGGACC...................2111.001100000
..............CCAGGTGGCACCAAATACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
droAna3
CTTCCGGCAACCTGCCGGGCGGAACCCGCTACCGTCACTTCTCCTACCACGTTTAGAA------GCTGCTC---------TA------------------------------------------------------------------------------GCTATG--TT---TTAT-GG-TGTGCCCGATACTAATACGTCAT-----------TGTTT---CG--------------------A-----ATAT------ATATACA----------------TATAT-TTA--TT-A------------------TTTATTT-CAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--TGTAC-----------T----------ATATA-----TGATGTTT-TCGAT-----GCTCGTATTCA------A------------------------------ATGATGTAAAT--GTTTTGACTTGGACTAATCCCCACTAATGACCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................AATCCACTTAAC--CCGCTAACCTTG------AG..................................................................................................................................................................2612.002011000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----TGATGTTT-TCGAT-----GCTCGT.........................................................................................2212.002020000
.......................................................................................................................................................................................................................................................................................................................................ATAATCCACTTAAC--CCGCT.................................................................................................................................................................................1911.001010000
.......CAACCTGCCGGGCGGAACCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGACTAATCCCCACTAATGACCA.2611.001010000
...................................................................................................................................................................................................ATACGTCAT-----------TGTTT---CG--------------------A-----AT................................................................................................................................................................................................................................................................................1911.001010000
..................................................................................................................................................................................GG-TGTGCCCGATACTAATACGTC...................................................................................................................................................................................................................................................................................................................................2311.001010000
............................................................................................................................................................................................................................................................................................................................................................AACCTTG------AGTGCCT-ATA--TGTAC-----------T----------AC..........................................................................................................................2511.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----TGATGTTT-TCGAT-----GCT............................................................................................1911.001010000
..................................................................................................................................................................TATG--TT---TTAT-GG-TGTGCCC.................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................A------------------TTTATTT-CAATAATCCACT............................................................................................................................................................................................2011.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAAAT--GTTTTGACT.........................1811.001010000
.......CAACCTGCCGGGCGGAACCCGCTACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..................................................................................................................................................................................................................................................................................................................................................AAC--CCGCTAACCTTG------AGTGC...............................................................................................................................................................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGACTAATCCCCACTAATGACC..2511.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................A-----TGATGTTT-TCGAT-----GCTCGT.........................................................................................2011.001010000
......................................................................................................................................................................................GTGCCCGATACTAATACGTC...................................................................................................................................................................................................................................................................................................................................2011.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGACTAATCCCCACT.........2211.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTTT-TCGAT-----GCTCGT.........................................................................................1911.001010000
........AACCTGCCGGGCGGAACCCGCTACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.......................................TCTCCTACCACGTTTAGAA------GCTGCTC---------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................A-----TGATGTTT-TCGAT-----GCTCGTATT......................................................................................2311.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAAAT--GTTTTGACTT........................1911.001001000
........................................CTCCTACCACGTTTAGAA------GCTGCTC---------TA------------------------------------------------------------------------------G............................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................................................................................................................CAATAATCCACTTAAC--CCGCTAACCTTG------A...................................................................................................................................................................2911.001010000
.........................................................................................................................................................................................................................................................................................................................................AATCCACTTAAC--CCGCTAAC..............................................................................................................................................................................2011.001010000
.........................................................................................................................................................................T---TTAT-GG-TGTGCCCGATACTAATAC......................................................................................................................................................................................................................................................................................................................................2511.001010000
........................................CTCCTACCACGTTTAGAA------GCTGCTC---------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................C-----------T----------ATATA-----TGATGTTT-TCGAT-----GCT............................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGGACTAATCCCCACTAAT......2311.001010000
.........................................................................................................................................................................................................................................................................................................................................AATCCACTTAAC--CCGCTAACCTT...........................................................................................................................................................................2311.001010000
......................AACCCGCTACCGTCACTTCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
..TCCGGCAACCTGCCGGGCGGAACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......................................................................................................................................................................................GTGCCCGATACTAATACGTCAT-----------T.....................................................................................................................................................................................................................................................................................................................2311.001001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT--GTTTTGACTTGGACTAATCCC.............2411.001010000
...CCGGCAACCTGCCGGGCGGAACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
CTTCCGGCAACCTGCCGGGCGGAACCCGCTACCGTCACTTCTCCTACCACGTTTAGGA------GCTGCTC---------TA------------------------------------------------------------------------------GCTATG--TG---TTAT-GG-TGTGCCCGATACTAATACGTCAT-----------TGTTT---CG--------------------A-----ATAT------ATATACG----------------TATAT---ATATTTA------------------TTTATTT-CAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--TGTAC-----------T----------ATATA-----TGATGTTT-TCGAT-----GCTCGTATTCA------A------------------------------ATGATGTAAAT--GTTTTGACTTGGACTAATCCCCACTAATGACCAASizeHit CountTotal NormTotal
No Reads
droKik1
CCTCCGGCAACCTGCCGGGCGGCACCAAGTACCGTCACTTCTCCTACCACGTTTAGGAT------------TAG----GA----T-GCTGCTG-----------------------------------------ATGT---TC--TCCA-GTGCTCCGGTGCTTTGAATG---TTTTCGG-T--GCCC---ACTAACACGTCAT-----------TGTTT---CG--------------------A-----ATAT------ATATATAT-ATA---------AAT--CTATTATA------------------------TCCTTCGAATAATCCACTTAACCACCGCTAACCTTG------AGTGCCT-ATA--TA--------------T----------GTATA-----CGATGCT---CGA------------ATTCA------------------------------------GATGATGTAAAT--GTTTTGACTTGGACTAATCACCACTAATGACCACSizeHit CountTotal NormTotal
No Reads
droFic1
CCAGTGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTCTAGGC--------TGCTC---------CAGGT-GCTGGATCG-----------------------------------GGAGCGTT---TG--CCCA-C--------GGCTTTCAATG---TTAT-GG-T--GCCC---ACTAATACGTCATTC---------TGTTT---CG--------------------A-----ATAT------ACATATACTATA-----------T-------ATATTTAATACCTATATACATAATGTTTATTTGAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--T--------------------------GTATT-----CGATGCTA-CCGA-------------------------------------------------------TGATGTAATT--GTTTTGACTTGGACTAATCACCACTAATGACCAASizeHit CountTotal NormTotal
No Reads
droEle1
CCTCCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGAAT-----GATGTAGTGC----AT-----C-----------------------------------------------------------TCCATT--------TGCTTTGAATTATGTTAT-GG-T--GCCC---GCTAATGCGTCAT-----------TGTCT---CG--------------------AAACAG-CAT------ATATATA----------------TATAT-CTA--C-------------------------CTTGAAATAATCCCCTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--T--------------------------GTATACGTTATGATGTTC-CCGA-------------------------------------------------------TGATGTATTT--GTTTTGACTTGGACTAATCACCACTAATGACCAASizeHit CountTotal NormTotal
No Reads
droRho1
CCTCCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGG--------ATGCACTGCATCCAT-----CAGCGGATCG-----------------------------------GGAGCGGT---CG--CCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTCT---CG--------------------A-----ACCAATAT--ATATATA---T-------------------TA--C-------------------------TTTGAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCT-ATA--T--------------------------GTATA-----CGATGTTT-CCGA-------------------------------------------------------TGATGTATTT--GTTTTGACTTGGACTAATCACCACTAATGACCAASizeHit CountTotal NormTotal
No Reads
droBia1
CCTCCGGCAGCCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGGTTGC-CGGATGCACTGC----AT-----CGGCGGATCG---------GATGA--GGCGGCGCCGGCAGCGGCGGCGTCGGT---TG--CCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTT---TG--------------------A-----ATATATA-----ATATAC-ACA-----------CATAT-TTA--------------------------TATTTCAAATAATCCACCTAAC--ACGCTAACCTTG------AGTGCCC-ATG--TATA------------T----------GTATA-----CGATGTTT-CCGAT-----GAT--------------------------------------------GATGATGTATTT--GTTTTGACTTGGACTAATCCCCACTAATGACCAASizeHit CountTotal NormTotal
No Reads
droTak1
CCTCCGGCAACCTGCCCGGCGGCACCAAGTACCGTCACTTCTCCTACCACGTGTAGG--------ATGCACTGC----GT-----CAGCGGATCG-----------------------------------GC--------------CAG-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTTCTTTG--------------------A-----ATAT------ATATTCAG-ATAATTCAGATAAAT--AT-A----------------------------TATTTCAAGTAATCCACTTAAC--ACGCTAACCTTG------AGTGCCT-ATG--TATA------------T----------GTATA-----CGATGTTT-CCGAT-----GATGAT-----------------------------------------GATGATGTATTT--GTTTTGACTTGGACTAATCCCCACTAATGACCAASizeHit CountTotal NormTotal
No Reads
droEug1
CTTCCGGCAACCTGCCCGGCGGCACCAAATACCGTCACTTCTCCTACCACGTGTAGG--------ATGCACTGC----AT-----CAGCGGAACG-----------------------------------GCAGCGGCAATTG--GCCA-C--------TGCTTTGAATGTTATTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTT---TG--------------------A-----ATAT------ATATATA--------------TAT--AT-ATACATTTA------------------TATATACCAAATAATCCACTTAACAACCGCTAACCTTG------AGTGCCT-ATA--TA--------------T----------GTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTATTT--GTTTTGACTTGGACTAATCCCCACTAATGACCAASizeHit CountTotal NormTotal
No Reads
dm3
CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGGA------GACGCACAGC----GT-----CAAAGGATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----ATTTATATATATATA-----TA---------AAT--AT-ATACATT------------------------TTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCC-ATA--TATATATA--------T--ATATATTTGTATA-----CGAAGTTT-TCAAT----------------------------------------------------GATGATGTATTTTCGTTTTGACTTGGACTAATCACCACTAATGCCCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................ATCCACTTAAC--CCGCTAA...............................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGACTTGGACTAATCACCACT.........2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CTACCACGTGTAGGA------GACGCACAGC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGCGGCAACCTGCCCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................G--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--.....................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGTTT-TCAAT----------------------------------------------------GATGATGTATTTTC..................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------------------GATGATGTATTTTCGT................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TATA-----CGAAGTTT-TCAAT----------------------------------------------------GATGATGT........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACCACGTGTAGGA------GACGCACAGC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................CCACGTGTAGGA------GACGCACAGC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AAGTACCGCCACTTCTCCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----CGAAGTTT-TCAAT----------------------------------------------------GATGATGT........................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................A-----CGAAGTTT-TCAAT----------------------------------------------------GATGATGT........................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CTTAAC--CCGCTAACCTTG------A...................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TG--------------------A-----ATTTATATATATATA-----TA---------A..................................................................................................................................................................................................................................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TA-----CGAAGTTT-TCAAT----------------------------------------------------GATGATGTA.......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CGCACAGC----GT-----CAAAGGATCG-----------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CAAAGGATCG-----------------------------------GCGTTGGC---................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----CGAAGTTT-TCAAT----------------------------------------------------GAT.............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................ACGTGTAGGA------GACGCACAGC----GT-----CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................................................................................AAGGATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------GGCT..........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGACTAATCACC............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---..............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------GGGG..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................GGATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TG--TCCA-C--------GGCTTTGAATG---TTAA-T..........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CAAAGGATCG-----------------------------------GCGTTGGC---T...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CCACGTGTAGGA------GACGCACAGC----GT-----CAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTCTCCTACCACGTGTAGGA------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTAATCACCACTAATGCCCAA2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................G------AGTGCCC-ATA--TATATATA--------T--A...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCACCAAGTACCGCCACTTCTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AC--CCGCTAACCTTG------AGTGCC..............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................AATACGTCAT-----------TGTTC---TG--------------------A-----ATTTATATAT........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TTAAC--CCGCTAACCTTG------AGTGCCC-ATA--T......................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CACAGC----GT-----CAAAGGATCG-----------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGTATTTTCGTTT..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAAGGATCG-----------------------------------GCGTTGGC---TG--TC..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TG--TCCA-C--------GGCTTTGAATG---T...............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................ATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------GGC...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAAGGATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------GGC...........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATTTTCGTTTTGACTTGGACTA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................ACGTGTAGGA------GACGCACAGC----G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................G---TTAT-GG-T--GCCC---ACTAATACGTC...................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AAGGATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------GGCTTTG.......................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTACCGCCACTTCTCCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CACTTCTCCTACCACGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TA-----CGAAGTTT-TCAAT----------------------------------------------------GATGATGTAT......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CAGC----GT-----CAAAGGATCG-----------------------------------GCGTTGGC---T...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CCACTTAAC--CCGCTAACCTTG------AGTGCCC-............................................................................................................................................................2811.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................G--TCCA-C--------GGCTTTGAATG---TTAT-...........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAAGGATCG-----------------------------------GCGTTGGC---TG--TCC.........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TAACCTTG------AGTGCCC-ATA--TATAT..................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGACTTGGACTAATCACC............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TACCACGTGTAGGA------GACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
CCAGCGGCAACCTGCCCGGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CTTAAC--CCGCTAACCTTG------AG..................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGTACCGCCACTTCTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACCAAGTACCGCCACTTCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................G-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ACGCACAGC----GT-----CAAAGGATCG-----------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGACTAATCACCA...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................T-TCAAT----------------------------------------------------GATGATGTATTTTCGTTTTGAC..........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CTTAAC--CCGCTAACCTTG------AGTGCC..............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATTTTCGTTTTGACTTGGAC....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................GCTAACCTTG------AGTGCCC-AT..........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................AC--CCGCTAACCTTG------AGTGCCC-ATA--T......................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................CGCACAGC----GT-----CAAAGGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TATATTTGTATA-----CGAAGTTT-TC.......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...GCGGCAACCTGCCCGGCGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACCACGTGTAGGA------GACGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCAGCGGCAACCTGCCCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACGTCAT-----------TGTTC---TG--------------------A-----ATT...............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CTAACCTTG------AGTGCCC-ATA--TAG....................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACCACGTGTAGGA------GACGCACAGC----GT-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................ATACGTCAT-----------TGTTC---TG--------------------A-----ATTT..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CTAACCTTG------AGTGCCC-ATA--.......................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTT-TCAAT----------------------------------------------------GATGATGTAT......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................C---TG--TCCA-C--------GGCTTTGAATG---TTAT-G..........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................G--TCCA-C--------GGCTTTGAATG---TTAT-G..........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGCGGCAACCTGCCCGGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................GT-----CAAAGGATCG-----------------------------------GCGTTGGC---................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGGACTAATCACCACTA........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GTTGGC---TG--TCCA-C--------GGCTTTGAA.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CTTCTCCTACCACGTGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CCTTG------AGTGCCC-ATA--TATA...................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AAGGATCG-----------------------------------GCGTTGGC---TG--TCCA-C--------GGC...........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTTGAATG---TTAT-GG-T--GCCC---AC............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CAAAGGATCG-----------------------------------GCGTTGGC---TG--T...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................TACGTCAT-----------TGTTC---TG--------------------A-----ATTTATATATAT......................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TG--------------------A-----ATTTATATATATATA-----TA---------...................................................................................................................................................................................................................................................2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TG--------------------A-----ATTTATATATATATA-----..............................................................................................................................................................................................................................................................1870.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATATATATATA-----TA---------AAT--AT-ATACA......................................................................................................................................................................................................................................2370.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................A-----ATTTATATATATATA-----TA---------A..................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TG--------------------A-----ATTTATATATATATA-----T.............................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ATTTATATATATATA-----TA---------AA.................................................................................................................................................................................................................................................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................A--TATATATA--------T--ATATATTTGTA.........................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGTCACTTCTCCTACCACGTGTAGGG------GACGCACTGC----GT-----CAAAGGATCG-----------------------------------GCGTCGTC---TG--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----CTAT------ATATATA---TA---------AAT--AT-ATACATT------------------------TTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCC-ATT--TATAT----------------ATATTTGTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGTTTTGACTTGGACTAATCACCACTAATGCCCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGACT...................21116.0016001600000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGACTAAT................24111.001102900000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATTTTCGTTTTGACTTGGACT...................2619.00900900000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGT........................................2418.00800500000000300000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCGTTTTGACTTGGACT...................2317.00700700000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGAC....................2017.00700700000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGACTA..................2215.00500500000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGACT...................1915.00500500000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATTTTCGTTTTGACTTGGAC....................2515.00500500000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTTGACTTGGACTAAT................1914.00400400000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATTTTCGTTTTGACT.........................2014.00400400000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATTTTCGTTTTGACTTGG......................2314.00400400000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCGTTTTGACTTGGACTAAT................2614.00400400000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGAC....................1813.00310200000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGACTTGGACTAATC...............1913.00301200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCGTTTTGACTTGG......................2013.00300300000000000000
...................................................................GCACTGC----GT-----CAAAGGATCG-----------------------------------GCGTC......................................................................................................................................................................................................................................................................................................................................................................................................2413.00300300000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGACTAAT................2213.00301200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGACTAATCACCACT.........2913.00301200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTTGACTTGGACTAATCACC............2312.00201100000000000000
..................................................................................................................................................................TTTGAATG---TTAT-GG-T--GCCC---A.............................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATTTTCGTTTTGACTTGGACT...................2512.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGACTAATC...............2512.00200200000000000000
...................................................................................................................................................................................................ATACGTCAT-----------TGTTC---TG--------------------A-----CT................................................................................................................................................................................................................................................................................1912.00201100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTCGTTTTGACTTGGACTA..................2312.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCGTTTTGACTTGGA.....................2112.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGTTTTGACTTGGACTA..................2112.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGACTAATCAC.............2712.00200200000000000000
..................................................................................................................................................................TTTGAATG---TTAT-GG-T--GCCC---..............................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTGGACTAATCACC............1812.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................A-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTAT......................................2412.00210100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATTTTCGTTTTGACTTGGACC...................2612.00200200000000000000
..........................................................................................................................................................................................CC---ACTAATACGTCAT-----------TGTTC---TG--------------------........................................................................................................................................................................................................................................................................................2212.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGTTTTGACTTGGACT...................2012.00200200000000000000
..................................................................................................................................................................................................AATACGTCAT-----------TGTTC---TG--------------------A-----..................................................................................................................................................................................................................................................................................1812.00201100000000000000
...................................................................................................................................................CA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---..............................................................................................................................................................................................................................................................................................................................................2512.00220000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTTGACTTGGACTAATC...............2112.00210100000000000000
..................................................................................................................................................................TTTGAATG---TTAT-GG-T--GCC..................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGACTAATCACCACTAATGCC...2811.00100100000000000000
......................................................................................AAAGGATCG-----------------------------------GCGTCGTC---TG--G...........................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.........................................................................................................................................................................................................CAT-----------TGTTC---TG--------------------A-----CTAT------ATATAT..................................................................................................................................................................................................................................................................2111.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATTTTCGTTTTGACT.........................1911.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGACTTGGACTAATCACC............2011.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTT-TCGAT----------------------------------------------------GATGATGT........................................1911.00100000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGACTA..................2011.00100100000000000000
...............................................................................................................................................................................................ACTAATACGTCAT-----------TGTTC---TG--------------------A-----CT................................................................................................................................................................................................................................................................................2311.00100000010000000000
..................................................................................................................................................................................................AATACGTCAT-----------TGTTC---TG--------------------A-----C.................................................................................................................................................................................................................................................................................1911.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATTTTCGTTTTGACTTGGACTAAT................2811.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCGTTTTGACTTGGACG...................2311.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGACC...................1911.00100100000000000000
.........................................................................................................................................C---TG--TCCA-C--------GGCTTTGAATG---TTAT-G..........................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...............................................................................T-----CAAAGGATCG-----------------------------------GCGTCGTC---TG--TC..........................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................CCACTTAAC--CCGCTAACC.............................................................................................................................................................................1811.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGACTAATCACCACT.........1811.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACTAATCACCACTAATGCC...2311.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTTTGACTTGGACT...................1811.00100100000000000000
...................................................................GCACTGC----GT-----CAAAGGATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGA.....................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGACTTGGACTAATCAC.............2111.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTCGTTTTGACTTGGACTAAT................2511.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGACTTGGACTAAT................1811.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................GCCC-ATT--TATAT----------------ATATTTGT..........................................................................................................................2011.00100000100000000000
...............................................CACGTGTAGGG------GACGCACTGC----GT-----CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..........................................................................................................................................................................................................................TC---TG--------------------A-----CTAT------ATATATA---TA---------AAT--AT-...........................................................................................................................................................................................................................................2311.00100100000000000000
........................................................GG------GACGCACTGC----GT-----CAAAGGATCG-----------------------------------GCGTC......................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000000000000000
...................................................................................................................................................CA-C--------GGCTTTGAATG---TTAT-GG-T--GCC..................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTT-TCGAT----------------------------------------------------GATGATGTAT......................................2211.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................C--CCGCTAACCTTG------AGTGCCC-............................................................................................................................................................2011.00110000000000000000
......................CACCAAGTACCGTCACTTCTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGACTAATCAC.............1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGACC...................2111.00100100000000000000
.................................GTCACTTCTCCTACCACGTGTAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTTCGTTTTGACTTGGACT...................2211.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTTT-TCGAT----------------------------------------------------GATGATGTAT......................................2011.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTATTTTCGTTTTGACTTGGAC....................2611.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGTTTTGACTTGGA.....................1811.00100100000000000000
...........................................................................................................................................................................................................T-----------TGTTC---TG--------------------A-----CTAT------ATATATA---TA---------AAT--..............................................................................................................................................................................................................................................2511.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGTTTTGACTTGGACC...................2011.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTTGACTTGGACTAA.................1911.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................T-TCGAT----------------------------------------------------GATGATGTATTTTCGT................................2211.00100000000000100000
...............................................................................................................................................................................................ACTAATACGTCAT-----------TGTTC---TG--------------------A-----CTA...............................................................................................................................................................................................................................................................................2411.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTATTTTCGTTTTGACTTGGACTA..................2711.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGT................................2711.00100100000000000000
.............................................................................................................................................TG--TCCA-C--------GGCTTTGAATG---TTAT-G..........................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................................CTTG------AGTGCCC-ATT--TATAT----------------ATATTT............................................................................................................................2511.00100000000000100000
........................................................................................AGGATCG-----------------------------------GCGTCGTC---TG--TC..........................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
..........................AAGTACCGTCACTTCTCCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGACTAATCACCACTAATGCCC..2511.00100100000000000000
.......................................................................................AAGGATCG-----------------------------------GCGTCGTC---TG--TCC.........................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGT................................2511.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGACTAATC...............2311.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCGTTTTGACTTGGACTAATC...............2411.00100100000000000000
droSec2
CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGTCACTTCTCCTACCACGTGTAGGG------GACGCACTGC----GT-----CAAAGGATCG-----------------------------------GCGTCGTC---TG--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----CTAT------ATATATA--------------AAT--AT-ATACATT------------------------TTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCC-ATT--TATAT----------------ATATTTGTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGTTTTGACTTGGACTAATTACCACTAATGCCCAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGT........................................2414.0040040
........................................................................................................................................TC---TG--TCCA-C--------GGCTTTGAATG---T...............................................................................................................................................................................................................................................................................................................................................................2111.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGA.....................1911.0010010
...............................................................................................................................................................GGCTTTGAATG---TTAT-GG-T--.....................................................................................................................................................................................................................................................................................................................................................1811.0010001
........................................................................................................................................................................................................................................................................................................................................TAATCCACTTAAC--CCGCTAACCTTG------AG..................................................................................................................................................................2711.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTTT-TCGAT----------------------------------------------------GATGATGTA.......................................1811.0010001
........................................................................................................................................TC---TG--TCCA-C--------GGCTTTGAATG---TTAT-G..........................................................................................................................................................................................................................................................................................................................................................2511.0010001
......................................................................................................................................CGTC---TG--TCCA-C--------GGCTTTGAAT....................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...............................................................................................................................................................................................................................................................................................................................................CTTAAC--CCGCTAACCTTG------AGT.................................................................................................................................................................2111.0010010
..................................................................................................................................................CCA-C--------GGCTTTGAATG---TTAT-GG-T--.....................................................................................................................................................................................................................................................................................................................................................2211.0010010
........................................................................GC----GT-----CAAAGGATCG-----------------------------------GCGTC......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
CCAGCGGCAACCTGCCCGGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.......................................................GGG------GACGCACTGC----GT-----CAAAGGATCG-----------------------------------GCG........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001
droYak3
CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGGATGCACTGATGCACTGC----GT-----CAATGGATCG-----------------------------------GCGTCGGC---TG--TCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----ATAT------ATATATA--------------AAT--AT-ATACATT----------------------TTTTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCCCATATTTATA--TTCATATGTAT----------GTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGTTTTGACTTGGACTAATCACCACTAATGACCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................GTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGT........................................2614.00400100030000
........................................................GATGCACTGATGCACTGC----GT-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00400000040000
.............................................ACCACGTGTAGGATGCACTGATGCACTGC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2914.00400000040000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGT........................................2413.00300000030000
................................................................GATGCACTGC----GT-----CAATGGATCG-----------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000030000
................................................................GATGCACTGC----GT-----CAATGGATCG-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................................................................................2312.00200000020000
.........................................................................................GGATCG-----------------------------------GCGTCGGC---TG--TC..........................................................................................................................................................................................................................................................................................................................................................................................1812.00210100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................A-----CGATGTTT-TCGAT----------------------------------------------------GATGATGT........................................2212.00200000020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGACTA..................2012.00210100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGACTTGGACTAATC...............1911.00100100000000
..............................................................................GT-----CAATGGATCG-----------------------------------GCGTCGGC---TG--TC..........................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGACT...................2111.00110000000000
.......................................................................................................................................................................ATG---TTAT-GG-T--GCCC---ACTAATACGTC...................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................................................CTGATGCACTGC----GT-----CAATGGATCG-----------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
................................................................GATGCACTGC----GT-----CAATGGATCG-----------------------------------GCGTC......................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
CCAGCGGCAACCTGCCCGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGACTTGGACTAAT................1811.00110000000000
...................................................................................................................................CGTCGGC---TG--TCCA-C--------GGCTTT........................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..........................................................................................GATCG-----------------------------------GCGTCGGC---TG--TCCA-C--------GGCTTTGAAT....................................................................................................................................................................................................................................................................................................................................................................3011.00100000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................AT----------GTATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGT........................................2811.00100000010000
................................................................................................................................................................................T-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------........................................................................................................................................................................................................................................................................................2811.00110000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTCGTTTTGACTTGGACT...................2311.00100100000000
...........................................CTACCACGTGTAGGATGCACTGATGCACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
....................................................................................................................................................A-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---A.............................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTTT-TCGAT----------------------------------------------------GAT.............................................1681.00800000000008
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGA.....................1911.00100100000000
.................................................................ATGCACTGC----GT-----CAATGGATCG-----------------------------------GCGTC......................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGTTTTGACTTGGACTAATCAC.............2511.00100100000000
.........................................................ATGCACTGATGCACTGC----GT-----C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...GCGGCAACCTGCCCGGCGGCACCAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
...................................................................GCACTGC----GT-----CAATGGATCG-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GAT----------------------------------------------------GATGATGTATTTTCGT................................1911.00100000010000
...............................CCGCCACTTCTCCTACCACGTGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...................................................................................................................................................CA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---A.............................................................................................................................................................................................................................................................................................................................................2611.00110000000000
......................................................................................AATGGATCG-----------------------------------GCGTCGGC---TG--TC..........................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GAT----------------------------------------------------GATGATGTATTTTCGTTTTGACT.........................2611.00100001000000
..............................................................................GT-----CAATGGATCG-----------------------------------GCGTCGGC---T...............................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGTATTTTCGTTTTG............................2011.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTT-TCGAT----------------------------------------------------GATGATGTATTTTCGT................................2811.00100000010000
.........................................................................................................................................................................................................................................................................................................................................AATCCACTTAAC--CCGCTAACCT............................................................................................................................................................................2211.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................CATATGTAT----------GTATA-----CGATG.............................................................................................................1911.00101000000000
.......................................................................................ATGGATCG-----------------------------------GCGTCGGC---TG--TCCA-C--------GGCT..........................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001
......................................................................CTGC----GT-----CAATGGATCG-----------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
.......................................................................................................................................GGC---TG--TCCA-C--------GGCTTTGAATG---................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......................ACCAAGTACCGCCACTTCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGTTTTGACTTGGACTA..................2211.00110000000000
....................................................GTAGGATGCACTGATGCACTGC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
.......................................................................................ATGGATCG-----------------------------------GCGTCGGC---TG--............................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000
...........................................CTACCACGTGTAGGATGCACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
droEre2
CCAGCGGCAACCTGCCCGGCGGCACCAAGTACCGCCACTTCTCCTACCACGTGTAGG--------ATGCACTGC----GC-----CAATGGATCG-----------------------------------GCGTCGGC---TGCGTCCA-C--------GGCTTTGAATG---TTAT-GG-T--GCCC---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----ATAT------ATATA----------------ACT--AT-ATACATT------------------------TTGCAAATAATCCACTTAAC--CCGCTAACCTTG------AGTGCCG-ATA--TATACATA--------T----------ATATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTACTTTCGTTTTGACTTGGACTAATCACCACTAATGACCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................GC-----CAATGGATCG-----------------------------------GCGTCGGC---TGC.............................................................................................................................................................................................................................................................................................................................................................................................2312.0020000200
....................................................................................................................................GTCGGC---TGCGTCCA-C--------GGC...........................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.......................................................................................................................................................................ATG---TTAT-GG-T--GCCC---ACTAATACGTC...................................................................................................................................................................................................................................................................................................................................2511.0010100000
....................................................GTAGG--------ATGCACTGC----GC-----CAATGGATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTT-TCGAT----------------------------------------------------GATGATGT........................................1911.0010000010
.....................................................................................CAATGGATCG-----------------------------------GCGTCGGC---TGC.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.....GGCAACCTGCCCGGCGGCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
..............................................................................GC-----CAATGGATCG-----------------------------------GCGTCGGC---TGCGTCC.........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
..............................................................................................G-----------------------------------GCGTCGGC---TGCGTCCA-C--------GGCTTTG.......................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
................................................................................................................................................................................................................................................................................................................................................TTAAC--CCGCTAACCTTG------AGTGCCG-ATA--T......................................................................................................................................................2811.0010000010
..........................................................................................................................................................................................................AT-----------TGTTC---TG--------------------A-----ATAT------ATATA----------------ACT--AT-ATAC.......................................................................................................................................................................................................................................2811.0011000000
..........................................................................................................................................................................................................................................................................................................................................................CTAACCTTG------AGTGCCG-AT..........................................................................................................................................................1811.0010100000
.............................................................................................................................................................................................................................................................................................................................................................ACCTTG------AGTGCCG-ATA--TATA...................................................................................................................................................2011.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACTTTCGTTTTGACTTG.......................2211.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----CGATGTTT-TCGAT----------------------------------------------------GAT.............................................1911.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GAT----------------------------------------------------GATGATGTACTTTCGTTTT.............................2211.0010100000
...............................................................................................................................................................................................................................................................................................................................................CTTAAC--CCGCTAACCTTG------AGT.................................................................................................................................................................2111.0010000010
...........................................CTACCACGTGTAGG--------ATGCACTGC----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................TT-TCGAT----------------------------------------------------GATGATGTACTTTC..................................2111.0010000010
..........................................................................................GATCG-----------------------------------GCGTCGGC---TGCGTCCA-C--------GG............................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----CGATGTTT-TCGAT----------------------------------------------------GATGATGTACC.....................................2711.0010100000
..............................................................................................................................................GCGTCCA-C--------GGCTTTGAATG---TT..............................................................................................................................................................................................................................................................................................................................................................2111.0010000010
............................................TACCACGTGTAGG--------ATGCACTGC----GC-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACTTTCGTTTTGACTT........................2111.0010000100
.........................................................................C----GC-----CAATGGATCG-----------------------------------GCGTCGGC---TGC.............................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTCGTTTTGACTTGGACTAAT................2511.0010000010
...........................................CTACCACGTGTAGG--------ATGCACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...........................................................................................................................................................................................C---ACTAATACGTCAT-----------TGTTC---TG--------------------A-----ATAT------........................................................................................................................................................................................................................................................................2611.0011000000
..AGCGGCAACCTGCCCGGCGGCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
................................................................................................................................................................................................................................................................................................................................................................TTG------AGTGCCG-ATA--TATACAT................................................................................................................................................2011.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACTTTCGTTTTGACTTGGA.....................2411.0010000100
.................................................................ATGCACTGC----GC-----CAATGGATCG-----------------------------------G..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..................................................................TGCACTGC----GC-----CAATGGATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................GAT----------------------------------------------------GATGATGTACTTTCGTTTTGA...........................2411.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGTACTTTCGTTTTGACTTGGA.....................2711.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTTTCGTTTTGACTTG.......................2011.0010000010
...................................................................................................................................CGTCGGC---TGCGTCCA-C--------GGCTTTGA......................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.........................................................................................................................................................................................................................................................................................................................................................GCTAACCTTG------AGTGCCG-ATA--TATAC..................................................................................................................................................2511.0010001000

Generated: 05/18/2015 at 06:43 AM