ID:

dwi_325

 Coordinate:

scf2_1100000004382:540830-540980 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dwil_GLEANR_10870:4]; CDS [Dwil\GK10662-cds]; intron [Dwil\GK10662-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAACAAAAAATTAATAACTAAATAACTTCTTACTTCTATGTACATAAATGCGTTCAACGCGCGCTCTGTCTCTTAAAAACAAACAATTAAACAATTTACCTGCTGCCACAACATATACTAAACCAAAAAATATTTATCCACAAACACCTACCGCACACCCACACACACACACACAAATAAAAACCTACACACGTGCTGCAGATTGGCATTGGCAATATTGAGCTTTGGTATGGTCTATCAATAGCCACCAC
**************************************************.................................................((((.((.((...................................................................................)))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
 M020
head
 V119
head
..................................................................................................................................................CGTACCGCAAACCGACACA...................................................................................... 19 3 15 3.47 52 51 0 0 0 1
........................................................................................................................................................................................................................ATTGAGCTTTGGTATGGTCT............... 20 0 1 1.00 1 0 0 0 1 0
...............................................................................................................................................................................................................ATTGGCAATATTGAGCTTTGGTA..................... 23 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................CAATATTGAGCTTTGGTATGGT................. 22 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................TGGCATTGGCAATATTGAGCTTTGG....................... 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................GTATGGTCTATCAATAGCC..... 19 0 1 1.00 1 0 0 1 0 0
.........................................................................................................................................................................................................................TTGAGCTTTGGTATGGTCTATCAAT......... 25 0 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................TTATGACCTACACACGTGCT...................................................... 20 3 3 0.67 2 0 0 0 0 2
........................................................................................................................................................................................CTACACACGTGCTACAAATTGA............................................. 22 3 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................................................GCTGCAGATTGGAATGGGC...................................... 19 2 4 0.25 1 0 1 0 0 0
......................................................CAACGCGCGCACGGTCTAT.................................................................................................................................................................................. 19 3 4 0.25 1 1 0 0 0 0
......................................................CAACGCGCGCACGGTCTA................................................................................................................................................................................... 18 3 16 0.06 1 1 0 0 0 0
.............................................................................................AGTTACTTGCTGTCACAAC........................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TTTGTTTTTTAATTATTGATTTATTGAAGAATGAAGATACATGTATTTACGCAAGTTGCGCGCGAGACAGAGAATTTTTGTTTGTTAATTTGTTAAATGGACGACGGTGTTGTATATGATTTGGTTTTTTATAAATAGGTGTTTGTGGATGGCGTGTGGGTGTGTGTGTGTGTGTTTATTTTTGGATGTGTGCACGACGTCTAACCGTAACCGTTATAACTCGAAACCATACCAGATAGTTATCGGTGGTG
**************************************************.................................................((((.((.((...................................................................................)))).))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
...................................................................................................................................................................................................GACGTCTAGCCGTAACCGTC.................................... 20 2 1 1.00 1 1 0
..................................................................................................................................................................................................CGTCGTCTAGCCGTAACCGTC.................................... 21 3 4 0.50 2 2 0
......................................................GTTGCGCGCGTGCCAGAT................................................................................................................................................................................... 18 3 16 0.13 2 2 0
.............................................................................................................................................................................................................................CGGAACCATACGAGATGGT........... 19 3 20 0.10 2 2 0
........................................................................................................................................................CGTGTGGGTGTGTGTGTGTG............................................................................... 20 0 20 0.05 1 0 1
...................................................................................................................................................................................TTTGGGAAGTGGGCACGAC..................................................... 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004382:540780-541030 - dwi_325 AAA-------------------------CAAAAAATT--AAT-AACTA-AATAACTTCTTACTTCTATGTACATAA---A-TGCGTTCAACGC----------GCG-CTCTGTCTCTTAAAAACAAACAATTAAACAATTTACCTGCTGCCA--CAACATATACTAAACCAAAAA-ATAT------TT-ATCCACAA-----------------------------------ACACC----------TACC-----------------GCACACCCACACA------CACACACACAAATAAA-----------------------------------------------------------------AAC-----CTACACACGTGCTGCAGATTGGCATTGGCAATATTGAGCTTTGGTATGGTCTATCAATAGCCACCAC
droVir3 scaffold_13324:2576684-2576832 - CCA--------------------------------------------------------------------------------------------------------------------------------------------CTGCCACAA-----AACAAAACAACACAAAAT-GCC-------CTAATCTACTAA----------------------AA-------------TC----------C----------AACAAATATTTA----------------ACACATACACAC-------------AATCGT---------------------------------------------------ATC-----CAATATACAA-ACACAGATTGGCATTGGCAATATTGAGCTTTGGTATGGTCCTGCTATAACGACCAT
droMoj3 scaffold_6496:26294994-26295263 + TCA-------T--AGATAC------ATAAAGT----ATAAACAGTCTT-AATACCTTT-TACTTTTATGTTATAAACAAA-TGTGTTCCA-----------------------------------------------------CTGCCACAA-------CAATACAACACAA---AATGT------CTAATCTTCTAA----------------------AAAC----------------------------------AACAAATATTTTATATACACTTACGATC-------------------------AATCGTAAAAAAAATATATATATATATCTATATATATATTTATATATATATATATATATATATATATATATATAT-ATATAGGTTGGCTTTGGCAAGATTGAGCTTTGGTATGGTCCGGCTATAACGACCAT
droGri2 scaffold_15112:4933791-4934003 - AATTCT----C--AAACA--------------CATTGTAATC-GTCTT-AATACCTTT-TACTTTTATGTTGCATACAAA-T-------GCGT----------GCC--A----------------------------------CTGCCACAAAAC----------AACACAA---AATGC------CTAATCTCC---------------------TACTAAAC-----------------------ACG--------AACAACTACTATACACACACACACACAC-------------------------AATCGT---------------------------------------------------AAC-----CATTATATGA-TCATAGATTGGAATTGGCAGTATTGAGCTTTGGTCTGGTCCCGCTATTACGACCAT
dp5 3:8215690-8215919 - AAGCAACC---------A-AACCATATCCAGTATTTGTAATC-GTC-T-AACCACTTT-TACTTCTATGTACATAA-----TGCGTG---TGCTCTGCCCTCCGCG-CTC----TCT---AAA----------------------ACCAAACTCC--------------------AAT-----------TCGCC-----------------------AACAAAA----------------------CAACA-----AC----------ATACACAA------------ACACACACGTATAACACATGAATA---------------------------------------------------------ACCATACCTAAATGCAT-ATGCAGATCGGCATTGGCGACATTCAGCTTTGGTATGGTCCGGCCATAACGACCAT
droPer2 scaffold_4:2095833-2096062 - AAGCAACC---------A-AACCATATCCAGTATTTGTAATC-GTC-T-AACCACTTT-TACTTCTATGTACATAA-----TGCGTG---TGCTCTGCCCTCCGCG-CTC----TCT---AAA----------------------ACCAAACTCC--------------------AAT-----------TCGCC-----------------------AACAAAA----------------------CAACA-----AC----------ATACACAA------------ACACACACGTATAACACATGTATA---------------------------------------------------------ACCATACCTAAATGCAT-ATGCAGATCGGCATTGGCGACATTCAGCTTTGGTATGGTCCGGCCATAACGACCAT
droAna3 scaffold_13266:16678337-16678534 - T------------------------------------------------AATAC--TC-TACTTCTATGTACTTAA---ATTGCGTACTGCGC----------GCG-CTC----TTT-GCAAACA---------------AACCTGCCGAAA--C--------------------AATGAACATAAATGCCG-----A-------AAA----CACTTAACAAACAAATACACACACCTCCGCACACC-ACA-----------------------------------CC--ACACACAAAA-----------------------------------------------------------------------------------CAC-ACACAGATCGGCATTGGCAGCATAGAGCTTTGGTATGGGCCGGCATTCACGACCAT
droBip1 scf7180000396384:787743-787950 - A-------------------------------------------------ATAACTTC-TACTTCTATGTACTTAA---A-TGCGTACTGCGC----------GCG-CTC----CTT-GCAAACA---------------AACCTGCCGAAA--C--------------------AATGT-----TGTGCCGCTCTAA-------AAA----CACTTAACAAACAAA--CAAACA--AACAAA---CAACA-----------------------------------CCACATCCACACTCAAC-------------C---------------------------------------------------AAC-----AAACAAACAC-ACGCAGATCGGCATTGGCAGTATAGAGCTTTGGTATGGGCCGGCATTCACGACCAT
droKik1 scf7180000302277:454482-454664 + ATG-----------------------CTCAGTAATTGTAATT-GTC-T-AATAACTTC-TACTTCTATGTACATAA---A------------CGCT---C---TCT-CTC----TCT---AAA--------------------ATGCCAACA-AA--------------------AATGC------CTGTTGAAAACA-------AAA----TACTTAC---------------------------AAATA-----------------------------------CTACACACACATAA--CA---------------------------------------------------------------------------------C-CCACAGATCGGCATTGGCGGCATAGAGCTTTGGTATGGGCCGGCAATGACGACCAT
droFic1 scf7180000454039:192332-192529 - TA---------------------------ATTAATTATAAAT-GTC-T-AATACCTTC-TACTTCTATGTACTTAA-----TGCGTACTGCGC----------GCG-CTC----TCT---AAACA---------------AACCCGCCGATATCC--------------------AATGC------CT---------A-------AAA----CACTTAACAAAC----------------------CAACA-----CC----------ATACACCCACCCACCCAC--------A-ATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATAGAGCTTTGGTATGGGCCGGCAATGACGACCAT
droEle1 scf7180000491282:613647-613840 - G-------------------------TCCAGTAATCTTATAT-GTC-T-AATACCTTC-TACTTCTATGTACATTA-----TGCGTACTGCGC----------GCG-CTC----TCT---AAACA---------------AACCTGCCGAAATGC--------------------AATGC------CTATTGTGACCAAAAAAAAAAA----CACTTAACAAAC----------------------CT----------------------------------------------ACACATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTTTAGAGCTTTGGTATGGCCCGGCAATGACGACCAT
droRho1 scf7180000780288:15281-15496 - AACTAAACTTT--AACCAC------GTCCAGTAATTGTAAAT-GTA-T-AATACCTTC-TACTTCTATGTACATAA-----TGCGTACTGCGC----------GCG-CTC----TCT---AAACA------------A--AACCTGCCGAAATCC--------------------AATGC------CTATCGTGATAA-------AAA----CATTTAACAAAC----------------------CGACA-----------------------------------CCAAACCCACAAATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATAGAGCTTTGGTATGGCCCGGCAATGACGACCAT
droBia1 scf7180000302291:793819-794026 + AAA-------TTGAAAGGC------GACGAGTATTTGTA-AT-GTA-CTTCT-ACTTC-TACTTTTATGTACCTAA-----TGCGTACTGCGG----------GCG-CTC----TCT---AATCA---------------AACCTGCCGAAATCC--------------------CATGC------CTATCGCGATAA-------AAA----CACTTAACAACC----------------------CAACA-----------------------------------CCACACCCACATATAACA------------------------------------------------------------------------------------C-CAGATCGGCATCGGCAGCATAGAGCTTTGGTATGGGCCGGCACTGACGACCAT
droTak1 scf7180000415379:556152-556358 - ATG-------T--AACCAC------GACCAGTAATTGTA-AT-ATA-T-AATACCTTC-TACTTCTATGTACTTAA-----CGCGTACTGCGC----------GCG-CTC----TCT---AAACA---------------AACCTGCCGAAATCC--------------------AATGC------CTGTCGCGATCA-------AAA----CACTTAACCAAT----------------------CGACA-----------------------------------CCACACCCACATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATAGAGCTTTGGTATGGGCCGGCAATGACGACCAT
droEug1 scf7180000409758:345847-346060 + G-------------------------ACCAGTAATTGTATAT-GTC-T-AATAACTTC-TACTTCTATGTACTTAA-----TGCGTACTGTGCTC--------GCG-CTC----TCT---AAACA---------------AACCTGCCGAAATCC--------------------AATGC------CTGTCGCGATAA-----AAAAT----CACTTAACAAAC----------------------CAACACCACAAC----------ATATACAC------------ATGCACA-CCATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAATATAGAGCTTTGGTATGGGCCGGCAATGACGACCAT
dm3 chr2R:9378327-9378537 - G-------------------------ACCAGTAATTTCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGTGCGCT--------CGCCTC----TCT---AAACA---------------AACCTGCCGAAATCC--------------------AATGT------CTGTCGCGGTAA-------AAC----CACTTAACAAACAA---CAA-----------------AA-----CA----------ATACCA------------ACACACGCACATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACAAT
droSim2 2r:10041798-10042000 - dsi_15219 A--------------------------------ATCGCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGTGCGCT--------CGCCTC----TCT---AAACA---------------AACCTGCCGAAATCC--------------------AATGT------CTGTCGCGGTAA-------AAC----CACTTAACAAACAA---CAAACAC----------CAACA-----------------------------------CCACACGCACTTATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACCAT
droSec2 scaffold_1:6897569-6897781 - A--------------------------------ATTGCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGTGCGCT--------CGCCTC----TGT---AAACA---------------AACCTGCCGAAATCC--------------------AATGT------CTGTCGCGGTAA-------AAC----CACTTAACAAACAA---CAAACACCAACAAACACCAACA-----------------------------------CCACACGCACATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACCAT
droYak3 2R:7575501-7575704 + CG------------------------ACCAGTAATTGCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGCGC----------GTGCCTC----TCT---AAACA---------------AACCTGCCGCACTCC--------------------AATGT------CTGTCGCGGCAA------AAAC----CACTTAACAAAC----------------------CAACA-----------------------------------CCACATGCACACATAACACAT---------------------------------------------------------------------------------TTAAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACCAT
droEre2 scaffold_4845:16437580-16437788 + CTT-------T--AACCAC------GACCAGTAATTGCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGTGC----------GCGCCTC----TCT---AA-------------------ACCTGCCGCAATCC--------------------AATGT------CGGTCGCGGTAC-------AACTTAAAACTTAACAAAC----------------------GAACA-----------------------------------CCACACGCACATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AAA-------------------------CAAAAAATT--AAT-AACTA-AATAACTTCTTACTTCTATGTACATAA---A-TGCGTTCAACGC----------GCG-CTCTGTCTCTTAAAAACAAACAATTAAACAATTTACCTGCTGCCA--CAACATATACTAAACCAAAAA-ATAT------TT-ATCCACAA-----------------------------------ACACC----------TACC-----------------GCACACCCACACA------CACACACACAAATAAA-----------------------------------------------------------------AAC-----CTACACACGTGCTGCAGATTGGCATTGGCAATATTGAGCTTTGGTATGGTCTATCAATAGCCACCACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCTTTGGTATGGTCT...............2011.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCAATATTGAGCTTTGGTA.....................2311.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................CAATATTGAGCTTTGGTATGGT.................2211.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................TGGCATTGGCAATATTGAGCTTTGG.......................2511.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGTCTATCAATAGCC.....1911.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCTTTGGTATGGTCTATCAAT.........2511.00100010
droVir3
CCA--------------------------------------------------------------------------------------------------------------------------------------------CTGCCACAA-----AACAAAACAACACAAAAT-GCC-------CTAATCTACTAA----------------------AA-------------TC----------C----------AACAAATATTTA----------------ACACATACACAC-------------AATCGT---------------------------------------------------ATC-----CAATATACAA-ACACAGATTGGCATTGGCAATATTGAGCTTTGGTATGGTCCTGCTATAACGACCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCAATATTGAGCTTTGGT......................2212.002000000000100000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AATATTGAGCTTTGGTATG...................1911.001000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AAT-GCC-------CTAATCTACTAA----------------------A..............................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AA-ACACAGATTGGCATTGGC......................................2011.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAGCTTTGGTATGGTCC...............2211.001000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTATGGTCCTGCTATAACGAC...2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAGCTTTGGTATGG..................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGGTCCTGCTATA........2011.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
TCA-------T--AGATAC------ATAAAGT----ATAAACAGTCTT-AATACCTTT-TACTTTTATGTTATAAACAAA-TGTGTTCCA-----------------------------------------------------CTGCCACAA-------CAATACAACACAA---AATGT------CTAATCTTCTAA----------------------AAAC----------------------------------AACAAATATTTTATATACACTTACGATC-------------------------AATCGTAAAAAAAATATATATATATATCTATATATATATTTATATATATATATATATATATATATATATATATAT-ATATAGGTTGGCTTTGGCAAGATTGAGCTTTGGTATGGTCCGGCTATAACGACCATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................ATACACTTACGATC-------------------------AATCGT..............................................................................................................................2011.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCTTTGGTATGGTCCGGC............2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................ATAT-ATATAGGTTGGCTTTGGCAA....................................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTTGGCAAGATTGAGCTT..........................2211.001100000
droGri2
AATTCT----C--AAACA--------------CATTGTAATC-GTCTT-AATACCTTT-TACTTTTATGTTGCATACAAA-T-------GCGT----------GCC--A----------------------------------CTGCCACAAAAC----------AACACAA---AATGC------CTAATCTCC---------------------TACTAAAC-----------------------ACG--------AACAACTACTATACACACACACACACAC-------------------------AATCGT---------------------------------------------------AAC-----CATTATATGA-TCATAGATTGGAATTGGCAGTATTGAGCTTTGGTCTGGTCCCGCTATTACGACCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................GATTGGAATTGGCAGTATTG...............................2011.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTCTGGTCCCGCTA..........2011.00110
dp5
AAGCAACC---------A-AACCATATCCAGTATTTGTAATC-GTC-T-AACCACTTT-TACTTCTATGTACATAA-----TGCGTG---TGCTCTGCCCTCCGCG-CTC----TCT---AAA----------------------ACCAAACTCC--------------------AAT-----------TCGCC-----------------------AACAAAA----------------------CAACA-----AC----------ATACACAA------------ACACACACGTATAACACATGAATA---------------------------------------------------------ACCATACCTAAATGCAT-ATGCAGATCGGCATTGGCGACATTCAGCTTTGGTATGGTCCGGCCATAACGACCATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGGCGACATTCAGCTTTGGT......................2512.0020200000000
..............................................................................................................................................................................................................................................................................ACACAA------------ACACACACGTATAACAC..........................................................................................................................................2311.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GACATTCAGCTTTGGTATG...................1911.0010010000000
......................................................................................G---TGCTCTGCCCTCCGCG-CTC----TCT---...................................................................................................................................................................................................................................................................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................AT-ATGCAGATCGGCATTGGCGAC...................................2311.0010010000000
...................................................................................................CTCCGCG-CTC----TCT---AAA----------------------ACCAAACTC.................................................................................................................................................................................................................................................................................................2511.0010100000000
................................................................................................................................................................................................................................................................................................................CATGAATA---------------------------------------------------------ACCATACCTAAAT.............................................................2111.0010010000000
.....................................................................TACATAA-----TGCGTG---TGCTCTGC.........................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................ATATCCAGTATTTGTAATC-GT..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGATCGGCATTGGCGACATTCA..............................2211.0010100000000
droPer2
AAGCAACC---------A-AACCATATCCAGTATTTGTAATC-GTC-T-AACCACTTT-TACTTCTATGTACATAA-----TGCGTG---TGCTCTGCCCTCCGCG-CTC----TCT---AAA----------------------ACCAAACTCC--------------------AAT-----------TCGCC-----------------------AACAAAA----------------------CAACA-----AC----------ATACACAA------------ACACACACGTATAACACATGTATA---------------------------------------------------------ACCATACCTAAATGCAT-ATGCAGATCGGCATTGGCGACATTCAGCTTTGGTATGGTCCGGCCATAACGACCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................CATTCAGCTTTGGTATGGTCCGGCC...........2513.003210000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGTCCGGCCATAACG.....1912.002200000
..............................GTATTTGTAATC-GTC-T-AACCACTTT-TA..............................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTTGGTATGGTCCGGC............2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CATTCAGCTTTGGTATGGTCC...............2111.001010000
droAna3
T------------------------------------------------AATAC--TC-TACTTCTATGTACTTAA---ATTGCGTACTGCGC----------GCG-CTC----TTT-GCAAACA---------------AACCTGCCGAAA--C--------------------AATGAACATAAATGCCG-----A-------AAA----CACTTAACAAACAAATACACACACCTCCGCACACC-ACA-----------------------------------CC--ACACACAAAA-----------------------------------------------------------------------------------CAC-ACACAGATCGGCATTGGCAGCATAGAGCTTTGGTATGGGCCGGCATTCACGACCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGCATAGAGCTTTGGTATGGGCC...............2311.001010000
..............................................................TTCTATGTACTTAA---ATTGCGT.....................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................ACACAGATCGGCATTGGCAGCATAGAGC............................2811.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCAGCATAGAGCTTTT........................2011.001001000
droBip1
A-------------------------------------------------ATAACTTC-TACTTCTATGTACTTAA---A-TGCGTACTGCGC----------GCG-CTC----CTT-GCAAACA---------------AACCTGCCGAAA--C--------------------AATGT-----TGTGCCGCTCTAA-------AAA----CACTTAACAAACAAA--CAAACA--AACAAA---CAACA-----------------------------------CCACATCCACACTCAAC-------------C---------------------------------------------------AAC-----AAACAAACAC-ACGCAGATCGGCATTGGCAGTATAGAGCTTTGGTATGGGCCGGCATTCACGACCATSizeHit CountTotal NormTotal
No Reads
droKik1
ATG-----------------------CTCAGTAATTGTAATT-GTC-T-AATAACTTC-TACTTCTATGTACATAA---A------------CGCT---C---TCT-CTC----TCT---AAA--------------------ATGCCAACA-AA--------------------AATGC------CTGTTGAAAACA-------AAA----TACTTAC---------------------------AAATA-----------------------------------CTACACACACATAA--CA---------------------------------------------------------------------------------C-CCACAGATCGGCATTGGCGGCATAGAGCTTTGGTATGGGCCGGCAATGACGACCATSizeHit CountTotal NormTotal
No Reads
droFic1
TA---------------------------ATTAATTATAAAT-GTC-T-AATACCTTC-TACTTCTATGTACTTAA-----TGCGTACTGCGC----------GCG-CTC----TCT---AAACA---------------AACCCGCCGATATCC--------------------AATGC------CT---------A-------AAA----CACTTAACAAAC----------------------CAACA-----CC----------ATACACCCACCCACCCAC--------A-ATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATAGAGCTTTGGTATGGGCCGGCAATGACGACCATSizeHit CountTotal NormTotal
No Reads
droEle1
G-------------------------TCCAGTAATCTTATAT-GTC-T-AATACCTTC-TACTTCTATGTACATTA-----TGCGTACTGCGC----------GCG-CTC----TCT---AAACA---------------AACCTGCCGAAATGC--------------------AATGC------CTATTGTGACCAAAAAAAAAAA----CACTTAACAAAC----------------------CT----------------------------------------------ACACATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTTTAGAGCTTTGGTATGGCCCGGCAATGACGACCATSizeHit CountTotal NormTotal
No Reads
droRho1
AACTAAACTTT--AACCAC------GTCCAGTAATTGTAAAT-GTA-T-AATACCTTC-TACTTCTATGTACATAA-----TGCGTACTGCGC----------GCG-CTC----TCT---AAACA------------A--AACCTGCCGAAATCC--------------------AATGC------CTATCGTGATAA-------AAA----CATTTAACAAAC----------------------CGACA-----------------------------------CCAAACCCACAAATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATAGAGCTTTGGTATGGCCCGGCAATGACGACCATSizeHit CountTotal NormTotal
No Reads
droBia1
AAA-------TTGAAAGGC------GACGAGTATTTGTA-AT-GTA-CTTCT-ACTTC-TACTTTTATGTACCTAA-----TGCGTACTGCGG----------GCG-CTC----TCT---AATCA---------------AACCTGCCGAAATCC--------------------CATGC------CTATCGCGATAA-------AAA----CACTTAACAACC----------------------CAACA-----------------------------------CCACACCCACATATAACA------------------------------------------------------------------------------------C-CAGATCGGCATCGGCAGCATAGAGCTTTGGTATGGGCCGGCACTGACGACCATSizeHit CountTotal NormTotal
No Reads
droTak1
ATG-------T--AACCAC------GACCAGTAATTGTA-AT-ATA-T-AATACCTTC-TACTTCTATGTACTTAA-----CGCGTACTGCGC----------GCG-CTC----TCT---AAACA---------------AACCTGCCGAAATCC--------------------AATGC------CTGTCGCGATCA-------AAA----CACTTAACCAAT----------------------CGACA-----------------------------------CCACACCCACATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATAGAGCTTTGGTATGGGCCGGCAATGACGACCATSizeHit CountTotal NormTotal
No Reads
droEug1
G-------------------------ACCAGTAATTGTATAT-GTC-T-AATAACTTC-TACTTCTATGTACTTAA-----TGCGTACTGTGCTC--------GCG-CTC----TCT---AAACA---------------AACCTGCCGAAATCC--------------------AATGC------CTGTCGCGATAA-----AAAAT----CACTTAACAAAC----------------------CAACACCACAAC----------ATATACAC------------ATGCACA-CCATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAATATAGAGCTTTGGTATGGGCCGGCAATGACGACCATSizeHit CountTotal NormTotal
No Reads
dm3
G-------------------------ACCAGTAATTTCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGTGCGCT--------CGCCTC----TCT---AAACA---------------AACCTGCCGAAATCC--------------------AATGT------CTGTCGCGGTAA-------AAC----CACTTAACAAACAA---CAA-----------------AA-----CA----------ATACCA------------ACACACGCACATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCTTTGGTATGGGCCGGCAGT.........2515.0050000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TATACAGCTTTGGTATGGGCCGG.............2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGGGCCGGCAGTGACGACA..2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCTTTGGTATGGGCCGGC............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCAGTATACAGCTTTGGTATGGGC................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTTGGTATGGGCCGGCA...........2112.0020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTATACAGCTTTGGTATGGGCCGGCAGTG........2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCCGGCAGTGACGAC...1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGTATACAGCTTTGGTATGGG.................2112.0020000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGGC............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCTTTGGTATGGGCCGGCA...........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGGGCCGGCAGTGACGACAA.2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TATACAGCTTTGGTATGGGCCGGCAG..........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCTTTGGTATGGGCCGG.............2112.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGGCA...........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TATACAGCTTTGGTATGGGCCG..............2212.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................T-----TGCGTACTGTGCGCT--------CGCC...............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCAGTATACAGCTTTGGTATGG..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATT.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................TCT---AAACA---------------AACCTGCCGAAATC.................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAG....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................AATCC--------------------AATGT------CTGTCGCGGTAA-------AAC----C......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGGGCCGGCAGTGACG.....2311.0010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTTGGTATGGGCCGGCAGTGACGA....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AACCTGCCGAAATCC--------------------AAT.........................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TCC--------------------AATGT------CTGTCGCGGTAA-------AAC----CACT...................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGT...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................CGCCTC----TCT---AAACA---------------AACCT..........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCGGCATTGGCAGTATACAGCTTTGGT......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CTTCTATGTACATAT-----TGCGT.....................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTATGGGCCGGCAGTGA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGTATACAGCTTTGGTATGGGCCG..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................T---AAACA---------------AACCTGCCGAAATCC--------------------AATGT------C................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTATGGGCCGGCAGTGA.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGC......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAGATCGGCATTGGCAGTAT.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................ACA---------------AACCTGCCGAAATCC--------------------AATGT------C................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTATGGGCCGGC............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTTGGTATGGGCCGGCAGTGAC......2611.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGTATACAGCTTTGGTATGGGCCGG.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGGTATGGGCCGGCAGTGACGAC...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTA..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CGGCATTGGCAGTATACAGC............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGTATACAGCTTTGGTATGGGCCGGC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGT.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGT...................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGCCGGCAGTGACG.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TC-TACTTCTATGTACATAT-----TGCGTACTG.................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACAGCTTTGGTATGGGCC...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCAGTATACAGCTTTG........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................TGCCGAAATCC--------------------AATGT------CTGTCGCGGTAA-------A.............................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CAGTATACAGCTTTGGTATGGGCCGG.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................AATCC--------------------AATGT------CTGTCGCGGT.......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAAT-GTC-T-AATACCTTC-TACC............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGC......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GATCGGCATTGGCAGTATACAGC............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGG.............2211.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTTGGTATGGGCCGGCAGT.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ACTGTGCGCT--------CGCCTC----TCT---AAACA---------------AAA............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTATACAGCTTTGGTATGGGCCGGC............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GATCGGCATTGGCAGTATAC...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................C--------------------AATGT------CTGTCGCGGTAA-------AAC----CAC....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTATGGGCCGGCAGTGACGA....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACCAGTAATTTCAAAT-GTC-............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATCGGCATTGGCAGTATACAGCTT..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TATACAGCTTTGGTATGGGC................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATTTCAAAT-GTC-T-AATACCTTC-TACTTC..........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TACCA------------ACACACGCACATATAAC............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGGCCGGCAGTGACGAC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGGGCCGGCAGTGAC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CATTGGCAGTATACAGCTTTGGTA.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACATATAACA------------------------------------------------------------------------------------CTCAGATCGGC............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------CTCAGATCGGCATTGGCA.....................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
droSim2
A--------------------------------ATCGCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGTGCGCT--------CGCCTC----TCT---AAACA---------------AACCTGCCGAAATCC--------------------AATGT------CTGTCGCGGTAA-------AAC----CACTTAACAAACAA---CAAACAC----------CAACA-----------------------------------CCACACGCACTTATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................ATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGT...................................2612.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TATACAGCTTTGGTATGGGCC...............2111.00100000000001000000
............................................................................................................................................................................................GTCGCGGTAA-------AAC----CACTTAACAA.............................................................................................................................................................................................................................2311.00100010000000000000
..........................................................................................................................................................................................................................................................................................................ATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGG...................................2611.00100100000000000000
..........................................................................................................................................................................................................................................................A-----------------------------------CCACACGCACTTATAACA------------------------------------------------------------------------------------CTC....................................................2211.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGGCA...........2411.00100000000000100000
droSec2
A--------------------------------ATTGCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGTGCGCT--------CGCCTC----TGT---AAACA---------------AACCTGCCGAAATCC--------------------AATGT------CTGTCGCGGTAA-------AAC----CACTTAACAAACAA---CAAACACCAACAAACACCAACA-----------------------------------CCACACGCACATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCC...............2012.0020020
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGTATACAGCTTTGGTAT....................1811.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGGCA...........2411.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGG.............2211.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCG..............2111.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTTTGGTATGGGCC...............1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................CAGTATACAGCTTTGGTATGGGCC...............2411.0010001
....................................................................................................................................................................................................................................................................................................................................................................................................CTCAGATCGGCATTGGCAGTAT.................................2211.0010001
......................................................................................................................................................................................................................................................................................................................................................................................................................GTATACAGCTTTGGTATGGGCC...............2211.0010010
droYak3
CG------------------------ACCAGTAATTGCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGCGC----------GTGCCTC----TCT---AAACA---------------AACCTGCCGCACTCC--------------------AATGT------CTGTCGCGGCAA------AAAC----CACTTAACAAAC----------------------CAACA-----------------------------------CCACATGCACACATAACACAT---------------------------------------------------------------------------------TTAAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACCATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTATGGGCCGGCAGTGACGACCA.2812.00200000000002
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGGC............2312.00210000010000
.................................................................................................................................................................................................................................................................................................................AT---------------------------------------------------------------------------------TTAAGATCGGCATTGGC......................................1911.00100100000000
..................................................................................................................................................................................................GCAA------AAAC----CACTTAACAAAC----------------------CAACA-----------------------------------C............................................................................................................................................................2611.00101000000000
..................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------------------------------TTAAGATCGGCATTGGCA.....................................1911.00110000000000
............................................................................................................................................................................................................................................................................................................AACACAT---------------------------------------------------------------------------------TTAAGATCGGCATTGGC......................................2411.00110000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTATACAGCTTTGGTATGGGCCGGCA...........2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTATGGGCCGGCAGTG........2011.00100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTTTGGTATGGGCCGGC............2011.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGTATACAGCTTTGGTATGGGCC...............2611.00101000000000
............................................................................................................................................................................................................................................................................................................AACACAT---------------------------------------------------------------------------------TTAAGATCGGCATT.........................................2111.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCG..............2111.00100000010000
droEre2
CTT-------T--AACCAC------GACCAGTAATTGCAAAT-GTC-T-AATACCTTC-TACTTCTATGTACATAT-----TGCGTACTGTGC----------GCGCCTC----TCT---AA-------------------ACCTGCCGCAATCC--------------------AATGT------CGGTCGCGGTAC-------AACTTAAAACTTAACAAAC----------------------GAACA-----------------------------------CCACACGCACATATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGTATACAGCTTTGGTATGGGCCGGCAGTGACGACCATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................GTATACAGCTTTGGTATGGGCCGGC............2513.0030000300
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCCGGC............2312.0020100100
..........................................................................................................................................................................................................................................................................................................ATAACA------------------------------------------------------------------------------------CTCAGATCGGCATTGGCAGT...................................2611.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................GTATACAGCTTTGGTATGGGCCG..............2311.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGCTTTGGTATGGGCC...............2011.0010000010

Generated: 05/17/2015 at 10:46 PM