ID:

dwi_3190

 Coordinate:

scf2_1100000004943:1406476-1406626 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.2 -6.9

Flybase annnotation

CDS [Dwil\GK13687-cds]; exon [dwil_GLEANR_14014:6]; intron [Dwil\GK13687-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-
mature
  1. scf2_1100000001968:788-812 +
  2. scf2_1100000003696:7377-7401 +
  3. scf2_1100000004558:1352164-1352188 +
  4. scf2_1100000004564:58634-58658 +
  5. scf2_1100000004640:4001-4025 +
  6. scf2_1100000004837:1302135-1302159 +
  7. scf2_1100000004830:190091-190115 +
  8. scf2_1100000004887:298680-298704 +
  9. scf2_1100000004887:417620-417644 +
  10. scf2_1100000004943:2991075-2991099 +
  11. scf2_1100000004943:12475239-12475263 +
  12. scf2_1100000004909:2683613-2683637 +
  13. scf2_1100000004949:742234-742258 +
  14. scf2_1100000004954:599421-599445 +
  15. scf2_1100000004954:604432-604456 +
  16. scf2_1100000004963:2906330-2906354 +
  17. scf2_1100000004967:62740-62764 +
  18. scf2_1100000004968:2224638-2224662 +
  19. scf2_1100000004968:2635105-2635129 +
  20. scf2_1100000000208:5621-5645 +
  21. scf2_1100000004511:477085-477109 +
  22. scf2_1100000004515:1503289-1503313 +
  23. scf2_1100000004540:2606199-2606223 +
  24. scf2_1100000004585:3084758-3084782 +
  25. scf2_1100000004585:6188177-6188201 +
  26. scf2_1100000004624:18343-18367 +
  27. scf2_1100000004762:272022-272046 +
  28. scf2_1100000004837:627948-627972 +
  29. scf2_1100000004941:266714-266738 +
  30. dwi_3190  scf2_1100000004943:1406527-1406551 +
  31. scf2_1100000004943:13121105-13121129 +
  32. scf2_1100000004909:520471-520495 +
  33. scf2_1100000004909:909015-909039 +
  34. scf2_1100000004949:1388978-1389002 +
  35. scf2_1100000004954:1540110-1540134 +
  36. scf2_1100000004954:1557172-1557196 +
  37. scf2_1100000004961:2279192-2279216 +
  38. scf2_1100000004961:3485403-3485427 +
  39. scf2_1100000004961:3488817-3488841 +
  40. scf2_1100000004967:3396803-3396827 +
star
  1. scf2_1100000004762:368341-368361 +
  2. dwi_3190  scf2_1100000004943:1406568-1406588 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTAGGAGGGATTGCGCTAATCCAGACGGACGGACATGGCTATATAAACTCGTCTCTCTGATCAAGAATATATATACTTTAATATGTTCGGAGATGCTTCCTTCTATGCGTTGCACACTTCTGACCAAAATTAATAACACCTGTTTGCAAGGGTATAAATATAAATTAGTTTTTAAACACTATTTTTCCTTATCATTTTAGTACATTTGGGTTATGCCATCGTCATCGGCGCGCTGTGCTCAGTTGCCCCG
*****************************************************************************************************...(((((.(((((.((........................)).)))))..)))))......**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
.....................................................................................................TTCTATGCGTTGCACACTTCTGACC............................................................................................................................. 25 0 20 0.60 12 0 12 0
..............................................................................................................................................GTTTGCAAGGGTATAAATATA........................................................................................ 21 0 2 0.50 1 1 0 0
.......................................................................................................CTATGCGTTGCACACTTCTGAC.............................................................................................................................. 22 0 20 0.15 3 3 0 0
.....................................................................................................TTCTATGCGTTGCACACTTCTGACCAAA.......................................................................................................................... 28 0 20 0.10 2 2 0 0
...........................................................................................AGATGCTTCCTTCTATGCGTT........................................................................................................................................... 21 0 20 0.10 2 0 2 0
...........................................................................................................GCGTTGCACACTTCTGACCAAAAT........................................................................................................................ 24 0 20 0.10 2 2 0 0
.....................CCAGACGGACGGACATGGCT.................................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0
..........................CGGACGGACATGGCTATATAAACTCG....................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 1
..........................................................................................GAGATGCTTCCTTCTATGCGTTGC......................................................................................................................................... 24 0 20 0.05 1 0 1 0
..........................................................................................................TGCGTTGCACACTTCTGACC............................................................................................................................. 20 0 20 0.05 1 1 0 0

Anti-sense strand reads

AGATCCTCCCTAACGCGATTAGGTCTGCCTGCCTGTACCGATATATTTGAGCAGAGAGACTAGTTCTTATATATATGAAATTATACAAGCCTCTACGAAGGAAGATACGCAACGTGTGAAGACTGGTTTTAATTATTGTGGACAAACGTTCCCATATTTATATTTAATCAAAAATTTGTGATAAAAAGGAATAGTAAAATCATGTAAACCCAATACGGTAGCAGTAGCCGCGCGACACGAGTCAACGGGGC
****************************************************************************************...(((((.(((((.((........................)).)))))..)))))......***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
...................................................................................................................................ATAATCGTGGACAAAGGTTC.................................................................................................... 20 3 12 3.08 37 30 0 4 3
.....................................................................................................................................................................................................AATCCTGTAGACCCAATA.................................... 18 2 3 0.33 1 1 0 0 0
..................TTAGGTCTGCCTGCCTGTACCGA.................................................................................................................................................................................................................. 23 0 3 0.33 1 0 1 0 0
......................................................AGAGACTAGTTCTTATATATATGAAAT.......................................................................................................................................................................... 27 0 7 0.14 1 1 0 0 0
.....................GGTCTGCCTGCCTGTACCGAT................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004943:1406426-1406676 + dwi_3190 TCTAGGAGGGAT---TGC-----GC--------------TAATCCAGACGGACGGACATGGCTATATAAACTCGTCT-----CTCTGATCAAGAATATA--------TATACTTTAATATGT-TCGGAGATGCTTCCTTCTATGCGTTGCACA-CTT-------CTGACCAAAATTAATAACACCTGTTT--------------GCAAGGGTA------------------------------TAAATATAA-ATTAGT--T-------------TTTAAA----------------------------CA------CTATTTTTC-----CTTA-----TCATTT-----------------------------------------------TA-----------G--------------------------------------------------TA---------------------C---ATT-----T-GGGTTATGCCATCGTCATCGGCGCGCTGTGCTCAG--------------------------------------------T---------------------------------------------T------GCCCCG
droVir3 scaffold_12967:101327-101515 + --------------------------------------------CGGACGGACGGACATGGCTATATCGACTCGGCTGTTGATGCTGATTAAGAATATA--------TATACTTTA-TGGGG-TCGGAGATGTCTCCTTCTATGCGTTACACA-TTT-------CACGACAAAATTA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAAATATAA-A--TACTTAA---------------TAGTAGATTTCTTTAAGTTTTAGTAGTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TT--T-------------------------------------------------------------------------------------------------------------------------------------------------G--TTA
droMoj3 scaffold_6541:1861155-1861395 + TCTGA--GATCGAC--GC-----ACTAAT----ACG-GA-CGGACGGACAGACGGATAGGGCTATATCGACTCAGCTCGTCGCGCTGATCAAGAATATA--------TATACTTTG-TGGGG-TCTGCCACGCCTCCTTCTGTCCGTTACATA-CTT-------TTTCACAAAACCA-TTATACCCT-AATTTCCCATTTTAAA--------------------------TGGGTTCAGGGTATAAAAATTA-GTT-------------------------------------------------------------------CAC-----TGTA-----T------------------------------------------------------------------------------------------TACCAAAAGTATA-A-----------TA---------------------A---GTA-----T-TGCCTATCCCTGCGTCA------------------------------------------------------------------------------------------------------------------------T
droGri2 scaffold_15110:24412731-24412974 + TCTCTGAGATCTAC--GT-----GTTCAG----ACA-GA-CGGACGGACAGACGGACATGGCTATATCGACTCGGCTGTTGACCCTGATCAAGAATATA----CATATATACTTTA-TGGGG-TTGGAGATGCTTCCTTCTGCCTGTTACATA-CAT-------TATCACAAAACCA-TTATACCCT-TTGACCC-ATTTTTAA--------------------------TGGATTCTGGGTATAAAAATGC-GATATT--A-------------TATATG----------------------------TA------TTATCTTTC-----AATA-----TTATCA-----------------------------------------------TA-----------T--------------------------------------------------TATT--TG----------------------------TTGG--------------------------------------------------------------------------------------------------------------------------------------T
dp5 Unknown_singleton_426:520-741 + TCCTTGAGCACTAG--GC-----GCTGATAGGGACGG--ACAGACGGACAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATA--------TATACTTTA-TGGGGTTGGGAAACGATTCCTTCTGGACGTTACACA-CATCCACTTTTACCACAAATCTA-ATATACCCC-AATACTC-ATTT------------------------------TGAGTATCGGGTATAAAAATACTATGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAA-A----GA----------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------A--TTT
droPer2 scaffold_9:949077-949315 - TCTTTGAGAACTAG--TC-----GCTCAT----ATG-GG-CGGACGGACAGACGGACATGGCTCAATCGACTCTGCTATTGATGCTGATCAAGAATATATGTACATATATCCTTAA-TGGGG-TCGGAAACGCTTCCTTCTGGACGTTACACA-CATCCATTTTCACCACAAATCTA--AATACCCC-TATACTC-ATTT------------------------------TTTTTTTATTGTATAATTATTA--------------------------------------------------------------------TTTTTG----------------------------------------ATTTTTACTGAAT--------------AA-----------T------------------------TATTATT-A----TA----------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------T--TTT
droAna3 scaffold_13034:1490676-1490919 + TT--------------GC-----GT--------------AGAAACAGACAGACGGACATGCTTATATTGACTCAGGAGGTGATCCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGAGATGTCTCCTTCACTGCGTTGCACA-CCT-------TTGACCAAAATTA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAAAAACAT-GTTGGT--T-------------TTTGCG----------------------------TG------CCAGCATCA-----AATA-----TCGAAA--------------------------------T--------------TA-----------T--------------------------------------------------TACT--AT----------------------------TTAGTTCTCTCAGTGTAACTAGC-CGCTGCGGTCAACTAAT-------------------------------------------------------------------------------------T------G--CCC
droBip1 scf7180000395226:1808-2033 + --------------------------------------------CGGACAGACTGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGAGATGTCTCCTTCACTGCGTTGCACA-CTT-------TTGAACAAAATTA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAAAAATAT-A--AAG--------------------------------------------------T------------------------------------ATTCATTTGCAACACCTTTGCTCTTCGATCAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTCTCCATTTCAGCATGGCTTCATTAAGGGGTTATATACAGT-------------------------------------------------------TGC
droKik1 scf7180000302236:61870-62127 - TGAGG--GACTAGTTTGC-----GT--------------AGAAACAGACAGACGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGTAACGTCTCCTTCACTGCGTTGCAAAACTT-------CTGACTGTAATTA-TAATACCCT-----------------GCAAGGGAATAAAAAAATTCAAAGTT-----------------------GTTTGT--T-------------TTTA--------------------AATAATATAAA--------------TGTAACTCCCATTGT----------------------------ACTTTGGCCAC------------------------------------------------------------------------------------------------------------------------TGTGACAGCAGCATCAGCGCCCGGTTTT-----AAC---------------------------------------------------------------------------------------------CTCCG
droFic1 scf7180000453478:9366-9632 + ACTGAGAGACTAGTTTGCGAAACAGACAG----GAA-GA-CAGACGGACAGACGTACAGACGTATTTCGATTCAGATGGTGATGCTGATCAAGAATATA--------TATACTTTA-TGGGG-TCTAAGGTGTCTCCTTCACTGCGTTGCAAA-CTT-------CTGACTGAAATTA-TAATACCCT-TTTGCTCT--------GCAAGGGTA------------------------------TAAATATAT-GTCGG--AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-A--------------------------------------------------------------------------------------------------------------------------GGTTCTTTCTTCCATTTTCACTAAACTTTTATTATTTGTTGCGCCAGCACAGCGAGTTCCGCTCA--CTT
droEle1 scf7180000491113:296520-296773 + ACTGAGAGACTTGTTTGC-----GT--------AGA-AA-CGGACGGACAGACGGGCATGGCTAGATCGACTTTCCTAGTGATGCTGATCAAGAATATA--------TATACGTTA-TAGGG-TCGGAGATGTCTCCTTCACTGAGTTGCAAA-CTT-------CTGACTGAAATTA-TAATACCCT-TT--------------GCAAGGGTA------------------------------TAAAAACAA-A--GGC---------------------------------------------------------------------------------------ATACAGTTCTTAC--CCCTGATCTTAGCTGATCGCTACCTGAAATCAGG-----------C-------------------------AATGTT-G-----------CGTCATTACC--AG----------------------------TCGG------------------C------------------------------------------------------------------------------------------------------------A-C--CCT
droRho1 scf7180000776506:548-759 - --------------------------------------------CGGACAGACGGACATGGCTATATCAACTCAGGAGGTGATCCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGAGATGTCTCCTTCACTGCGTTGCACA-CTT-------TTGACCAAAATTA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAATAAGTA--------------------------------------------------------------------TTTTTA----------------------------------------A----------------------------------------------------------------TAACGTT-A----TAATTTT--AAAATAAAG-AG-----TATATTTCG--------------------------------ACAGCGCGCTGTGGCGAA--------------------------------------------T---------------------------------------------T------TCTTCG
droBia1 scf7180000302519:287410-287647 - --------------------------------------------CGGACAGACGGACATGGCTAGATCGACTCGTCTTGTGGCGCTGATCAAGAATATT--------TATACTTTA-TGGGG-TCGGAAACGTCTCCTTCACTGCGTTGCAAA-CTT-------CTGACTGAAATTA-TTATACCCT-CT--------------GCAAGGGTA------------------------------TAAAAAAAT-C--GAG-AAGGAAATAAAATATTAAAGA----------------------------TATTTTTTCTAA------------TG-----CAAATT-----------------------------------------------GAGTACTCATATAGAATGTATGAAAGGCGAATTATATT--------------------------TGTT--TG----------------------------C------------------------------------------------------------------------------------------------------------------------------------G--GCC
droTak1 scf7180000415949:117180-117411 + --------------------------------------------CGGACAGACGGACATGGCTAGATCGACTCGTCTTGTGATGCTGATCAAGAATATA--------TATACTTTA-TGGGG-TCGGAAACGTCTCCTTCACTGCGTTGCAAA-CTT-------CTGACTGAAATCA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAAATAAT--GTTAAC--T-------------TTACAGTGCTAATA--------------------T--------------TCTGACTCCCATTGTAT----------------------------------------------------TG-----------A--------------------------------------------------TA---------------------T---ATA-----T-AGCTCAGGCC--CGGCACTTTCCCCCTTTCCCCAA---TCC-------------------------------------------------------------------------------------------C--CCC
droEug1 scf7180000409551:469549-469771 - TCTCA-----------GT-----GTTCAT----ACG-GA-CGGACGGACAGACGGACATGGCTCAATCGAATTCGCTATTAATCCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGAAACGTTTCCTTCTATCTGTTACATA-CTT-------ATCAACGAATCTA-ACATTCCCT-TTTACTCT--------A-------------------------CGAGTGAGGGGTATAATAATTT-T--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAATTACCCCGTATAG-T--TTTTTTGCAATCCATCGTAACCGA--------------------------------------------------------------------------------------------------------------------------------------C
dm3 chr3L:23219501-23219726 + TTAATAAGATCTCG--AC-----GT--------------TCATACGGACAGTCGGACATGGCTGTATCGACTCGGCTATTGATCCTAATTAAGAATATA--------CATACTTTA-TATGG-TTGGAAACGCTTCCTTCTGCCTGTTGCATA-CTT-------TTCAACGAATAAA-GTATACCCT-TTTACTTC--------A-------------------------CGAAGAACGGGTATAAAACGCTTATTAGCTTAA---------------TAAATGTTTTATATAATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------TATT--GTTT--A---A--TA--C-------------------------------------------------------------------------------------------------------------------------------------------------A--TCT
droSim2 2l:23330216-23330428 + -----------------C-----GT--------------TCATACGGACAGACGTACATGGCCAGATC-----GGCATTTGAACCTGATCAAGAATATA--------TATACTTTA-TATGA-TCTGAAACGCTTTCTTCTGCCTGTTACATA-CTT-------TTCAACCAATCTA-GTATACGCT-TTTACTGT--------ACAA-------------------------GTAACTGGTATAAAAATAT-A--CATTTAACAAAAAAAACTTTTAATA----------------------------TA------TTAATTTAC-----TTTA-----TAAATA-----------------------------------------------TA-----------C--------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TGT
droSec2 scaffold_131:17920-18096 + TCTCG-----------AC-----GT--------------TCATACGGACAGACGAACATGGCTAGATCGACTCGGCTATTGATCCTGATCAAGAATATA--------TATACTTAA-TATGG-TCGGAAACGCTTCCTTCGGCGTGTTACATA-CTT-------TTCAACGAATCTG-GTATACCCT-TTTGCTCT--------T-------------------------CGAGTAACGTGTATAAATATGA-AAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------A--TTT
droYak3 v2_chrUn_5084:9719-9944 + --------------------------------------------CGGACAGACGGACATGGCCAGATTGACTCGGCTACTGATCCTGATCAAGAATATA--------TATACTTTA-TATGG-TCGGAAACGCTTCCTTCTGCCTGTTACATA-CTT-------TTCAACGAATCTA-GTATACCCT-TTTACTCT--------A-------------------------CGAGTAACGGGTATAATAAAGT-GACTA--CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-G--------------------------------------------------------------------------------------------------------------------------GTTGTTTATTATTGCTCTCCTTAGGCCCAAATTAATTAGTGCCTCACCAC--------CGGCACG--CCG
droEre2 scaffold_4784:25168352-25168551 - --------------------------------------------CGGACGAACGGACTTGGCCAGATCCAGTCGGCTATTGATCCAGATCAATAATATA----TATATACACTTTA-TATGG-TCGGAAACGCTTCCTTCTGCATGTTACATA-CTT-------TTCAACAAATCTA-GTATATCCT-AA--------------AAAAAAAC-----------TAACGTA-----------------------ATTTTT--T-------------ATTT--------------------GATAGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCAGAACCCA-----A-GGGACAAGGCGTCGTCA-------------------------------------------------------------------------------------------------------------------G--TGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TCTAGGAGGGAT---TGC-----GC--------------TAATCCAGACGGACGGACATGGCTATATAAACTCGTCT-----CTCTGATCAAGAATATA--------TATACTTTAATATGT-TCGGAGATGCTTCCTTCTATGCGTTGCACA-CTT-------CTGACCAAAATTAATAACACCTGTTT--------------GCAAGGGTA------------------------------TAAATATAA-ATTAGT--T-------------TTTAAA----------------------------CA------CTATTTTTC-----CTTA-----TCATTT-----------------------------------------------TA-----------G--------------------------------------------------TA---------------------C---ATT-----T-GGGTTATGCCATCGTCATCGGCGCGCTGTGCTCAG--------------------------------------------T---------------------------------------------T------GCCCCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................TTCTATGCGTTGCACA-CTT-------CTGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.6012000120
..........................................................................................................................................................................................GTTT--------------GCAAGGGTA------------------------------TAAATATA.............................................................................................................................................................................................................................................................................................................................................................................................2120.50101000
...........................................................................................................................................CTATGCGTTGCACA-CTT-------CTGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15303000
.........................................................................................................................................TTCTATGCGTTGCACA-CTT-------CTGACCAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
...............................................................................................................................AGATGCTTCCTTCTATGCGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
...............................................................................................................................................GCGTTGCACA-CTT-------CTGACCAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
...........................................CCAGACGGACGGACATGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
................................................CGGACGGACATGGCTATATAAACTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110000
..............................................................................................................................GAGATGCTTCCTTCTATGCGTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..............................................................................................................................................TGCGTTGCACA-CTT-------CTGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
droVir3
--------------------------------------------CGGACGGACGGACATGGCTATATCGACTCGGCTGTTGATGCTGATTAAGAATATA--------TATACTTTA-TGGGG-TCGGAGATGTCTCCTTCTATGCGTTACACA-TTT-------CACGACAAAATTA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAAATATAA-A--TACTTAA---------------TAGTAGATTTCTTTAAGTTTTAGTAGTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TT--T-------------------------------------------------------------------------------------------------------------------------------------------------G--TTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................TAAGAATATA--------TATACTTTA-TGGGG-TC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.80160000000000000000000000000000000000160000000000000000000000000000
..................................................................................................................................................TTACACA-TTT-------CACGACAAAATTA-T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.5010000000000000000000000000009000010000000000000000000000000000000
............................................................................................................................................TATGCGTTACACA-TTT-------CACGACAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.306000000000000000000000000300000000030000000000000000000000000000
.........................................................................................TAAGAATATA--------TATACTTTA-TGGGG-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.255000000000000000000000000000000000050000000000000000000000000000
.........................................................................................TAAGAATATA--------TATACTTTA-TGGGG-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.204000000000000000000000000000010000030000000000000000000000000000
..................................................................................TGCTGATTAAGAATATA--------TATACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.204000000000000000000000000000040000000000000000000000000000000000
..................................................................................................................................................TTACACA-TTT-------CACGACAAAATTA-TAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.204000000000000000000000000000000000000400000000000000000000000000
..................................................................................TGCTGATTAAGAATATA--------TATACTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153000000000000000000000000000000000000300000000000000000000000000
..................................................................TCGACTCGGCTGTTGATGCTGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000000000000000000000000000000000000000003
.........................................................................................TAAGAATATA--------TATACTTTA-TGGGG-TCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000000030000000000000000000000000000000000
..............................................................................................................................................TGCGTTACACA-TTT-------CACGACAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000000200000000000000000000000000000000
..................................................................................TGCTGATTAAGAATATA--------TATACTTTA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000001000000100000000000000000000000000
................................................................................................................TTTA-TGGGG-TCGGAGATGTCTCCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000020000000000000000000000000000
..................................................................................................A--------TATACTTTA-TGGGG-TCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000000020000000000000000000000000000000000
..................................................................................................................................................TTACACA-TTT-------CACGACAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000200000000000000000000000000000000000000
.........................................................................................TAAGAATATA--------TATACTTTA-TG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000002000000000000000000000000000000000
..................................................................................................................TA-TGGGG-TCGGAGATGTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000002000000000000000000000000000000000000000000000000000000000
..........................................................................................AAGAATATA--------TATACTTTA-TGGGG-TCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................TTCTATGCGTTACACA-TTT-------CACGACAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................TACTTTA-TGGGG-TCGGAGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................TGGCTATATCGACTCGGCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................GTCTCCTTCTATGCGTTACACA-TTT-------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................TTAAGAATATA--------TATACTTTA-TGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................TTAAGAATATA--------TATACTTTA-TGGGG-TC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................TACTTTA-TGGGG-TCGGAGATGTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................TCCTTCTATGCGTTACACA-TTT-------CACGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................GGG-TCGGAGATGTCTCCTTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CTATGCGTTACACA-TTT-------CACGACAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................TCCTTCTATGCGTTACACA-TTT-------CAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................TACACA-TTT-------CACGACAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TCCTTCTATGCGTTACACA-TT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
.................................................................................................TA--------TATACTTTA-TGGGG-TCGGAGATGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000001000000000000000000000000000000000000000
.....................................................................................TGATTAAGAATATA--------TATACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................TTACACA-TTT-------CACGACAAAATTA-TAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
...........................................................................................................................................................TT-------CACGACAAAATTA-TAATACCCT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................TTACACA-TTT-------CACGACAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................TTACACA-TTT-------CACGACAAAATTA-TAATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................TGATGCTGATTAAGAATATA--------TATACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
.............................................................................GTTGATGCTGATTAAGAATATA--------TATAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................TGGGG-TCGGAGATGTCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................TATGCGTTACACA-TTT-------CACGACAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................TTT-------CACGACAAAATTA-TAATACCCT-CT--------------............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................CTTTA-TGGGG-TCGGAGATGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................ATGCGTTACACA-TTT-------CACGACAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000010000000000000000000000000000000
.......................................................................................ATTAAGAATATA--------TATACTTTA-TGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................................CTGTTGATGCTGATTAAGAATATA--------TA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000010000000000000000000000000
droMoj3
TCTGA--GATCGAC--GC-----ACTAAT----ACG-GA-CGGACGGACAGACGGATAGGGCTATATCGACTCAGCTCGTCGCGCTGATCAAGAATATA--------TATACTTTG-TGGGG-TCTGCCACGCCTCCTTCTGTCCGTTACATA-CTT-------TTTCACAAAACCA-TTATACCCT-AATTTCCCATTTTAAA--------------------------TGGGTTCAGGGTATAAAAATTA-GTT-------------------------------------------------------------------CAC-----TGTA-----T------------------------------------------------------------------------------------------TACCAAAAGTATA-A-----------TA---------------------A---GTA-----T-TGCCTATCCCTGCGTCA------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..TGA--GATCGAC--GC-----ACTAAT----ACG-GA-CGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
.......................................................................................................................................................TA-CTT-------TTTCACAAAACCA-TTATACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153300000
..............................................................................................................................GCCACGCCTCCTTCTGTCCGTTACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.141100000
.................................................................................................................................ACGCCTCCTTCTGTCCGTTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141100000
.................................................................................................................TTG-TGGGG-TCTGCCACGCCTCCTTCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.102200000
.....................................................................................................................................................................................................TTTTAAA--------------------------TGGGTTCAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................18190.051100000
...........................AT----ACG-GA-CGGACGGACAGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
................................................................TATCGACTCAGCTCGTCGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
....................................................................................................................................................................TTTCACAAAACCA-TTATACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
..................................................................TCGACTCAGCTCGTCGCGCTGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
droGri2
TCTCTGAGATCTAC--GT-----GTTCAG----ACA-GA-CGGACGGACAGACGGACATGGCTATATCGACTCGGCTGTTGACCCTGATCAAGAATATA----CATATATACTTTA-TGGGG-TTGGAGATGCTTCCTTCTGCCTGTTACATA-CAT-------TATCACAAAACCA-TTATACCCT-TTGACCC-ATTTTTAA--------------------------TGGATTCTGGGTATAAAAATGC-GATATT--A-------------TATATG----------------------------TA------TTATCTTTC-----AATA-----TTATCA-----------------------------------------------TA-----------T--------------------------------------------------TATT--TG----------------------------TTGG--------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TCCTTGAGCACTAG--GC-----GCTGATAGGGACGG--ACAGACGGACAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATA--------TATACTTTA-TGGGGTTGGGAAACGATTCCTTCTGGACGTTACACA-CATCCACTTTTACCACAAATCTA-ATATACCCC-AATACTC-ATTT------------------------------TGAGTATCGGGTATAAAAATACTATGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTAAA-A----GA----------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------A--TTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................TTACCACAAATCTA-ATATACCCC-AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................25207.40148014800000000
...........................................................................................................................TGGGAAACGATTCCTTCTGGACGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2446.752709100001700
..............................GGGACGG--ACAGACGGACAGACAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25204.659300000000930
...........................................................................................................................TGGGAAACGATTCCTTCTGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2343.751501130100000
..........CTAG--GC-----GCTGATAGGGACGG--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20202.204400000003410
................................GACGG--ACAGACGGACAGACAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23202.104200000000420
..............................GGGACGG--ACAGACGGACAGACAGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26201.903800000015320
......................................................................................................................................TCCTTCTGGACGTTACACA-CATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.753503500000000
......................................................................................GATCAAGAATATA--------TATACTTTA-TGGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27201.152302300000000
.........ACTAG--GC-----GCTGATAGGGACGG--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.102201000001182
..........CTAG--GC-----GCTGATAGGGACGG--A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.951900000010180
................................GACGG--ACAGACGGACAGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.901800000000180
.................................ACGG--ACAGACGGACAGACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.901800000000180
...................................................................................................................................................................TTACCACAAATCTA-ATATACCCC-A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.651300000001300
.......................................................ACAGGGCTCAATCGACTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.651301300000000
..............................GGGACGG--ACAGACGGACAGACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.601200000010110
..................................CGG--ACAGACGGACAGACAGACAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.60120100000272
............................TAGGGACGG--ACAGACGGACAGACAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27160.5690100000170
............................TAGGGACGG--ACAGACGGACAGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25180.56100100000360
..................................................................................................................................................................................................C-ATTT------------------------------TGAGTATCGGGTATA...................................................................................................................................................................................................................................................................................................................................................................................................20200.551101100000000
.................................ACGG--ACAGACGGACAGACAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.551100000000110
............................TAGGGACGG--ACAGACGGACAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.50100200000260
...........................................................................................................................TGGGAAACGATTCCTTCTGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.5020020000000
................................GACGG--ACAGACGGACAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.501000000000100
...........................................................................................................................TGGGAAACGATTCCTTCTGGACGTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.5020200000000
...........TAG--GC-----GCTGATAGGGACGG--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.4590200000061
............................TAGGGACGG--ACAGACGGACAGACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26160.4470000000250
............................................................................................................................GGGAAACGATTCCTTCTGGACGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.4020000000200
............................................................................................................................GGGAAACGATTCCTTCTGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.4020200000000
.........................TGATAGGGACGG--ACAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3570100000420
..................................CGG--ACAGACGGACAGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.3570000100060
........................CTGATAGGGACGG--ACAGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3570000000340
..........CTAG--GC-----GCTGATAGGGACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2550200000030
...................................................................CGACTCGGCTATTGATGCTGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2550500000000
..................................CGG--ACAGACGGACAGACAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000500
............................TAGGGACGG--ACAGACGGACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2550200000300
...........................................................................................................................TGGGAAACGATTCCTTCTGGACGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510100000000
...........................................................................................................................TGGGAAACGATTCCTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510100000000
...................................................................................................................................................................TTACCACAAATCTA-ATATACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000100400
.........................................................................GGCTATTGATGCTGATCAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550500000000
...........TAG--GC-----GCTGATAGGGACGG--ACAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2040000000040
...........................................................................................................................TGGGAAACGATTCCTTCTGGACGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010010000000
................................GACGG--ACAGACGGACAGACAGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2040400000000
................................................................................................................................AACGATTCCTTCTGGACGTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040400000000
.................................ACGG--ACAGACGGACAGACAGACAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040000000301
............................TAGGGACGG--ACAGACGGACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040100000030
....................................G--ACAGACGGACAGACAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2040000004000
....................................................................................................................................................................TACCACAAATCTA-ATATACCCC-AAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000400
............AG--GC-----GCTGATAGGGACGG--AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2040000000202
..............................................................................TTGATGCTGATCAAGAATATA--------TA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000400
...........................................................................................................................TGGGAAACGATTCCTTCTGGACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710010000000
..........................GATAGGGACGG--ACAGACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000003000
......AGCACTAG--GC-----GCTGATAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530200010000
............................TAGGGACGG--ACAGACGGACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530200000100
.........................................................................................................................................................................CAAATCTA-ATATACCCC-AATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530030000000
...........TAG--GC-----GCTGATAGGGACGG--ACAGACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000300
........................................................................................TCAAGAATATA--------TATACTTTA-TGGGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27150.1320020000000
...........................................................................................................................TGGGAAACGATTCCTTCTGGACGTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.1110100000000
....................................................................................CTGATCAAGAATATA--------TATACTTTA-TGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1020200000000
..................................CGG--ACAGACGGACAGACAGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000200
................................GACGG--ACAGACGGACAGACAGACAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000020
...................................GG--ACAGACGGACAGACAGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000002000
.........................................................................................CAAGAATATA--------TATACTTTA-TG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000020
............................TAGGGACGG--ACAGACGGACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000001010
................................GACGG--ACAGACGGACAGACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
.............................................................................ATTGATGCTGATCAAGAATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000002000
.......................................................................................................................................CCTTCTGGACGTTACACA-CAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000002000
....................................................................................................................................................................TACCACAAATCTA-ATATACCCC-AATACTC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.1020200000000
..........................................................GGGCTCAATCGACTCGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020200000000
................................................CAGACAGACAGGGCTCAATCGACTCGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000020
....TGAGCACTAG--GC-----GCTGATAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
............................................................................................GAATATA--------TATACTTTA-TGGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
...............................................ACAGACAGACAGGGCTCAATCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
...........TAG--GC-----GCTGATAGGGACGG--AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000200
........................................CAGACGGACAGACAGACAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020100000010
..................................CGG--ACAGACGGACAGACAGACAGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000020
.................................................................................................................................................................................................TC-ATTT------------------------------TGAGTATCGGGTATAAAAATA.............................................................................................................................................................................................................................................................................................................................................................................................27200.1020200000000
..............................................................................................ATATA--------TATACTTTA-TGGGGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710000000010
............................TAGGGACGG--ACAGACGGACAGACAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27170.0610000000010
.........................TGATAGGGACGG--ACAGACGGACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.0510100000000
........................................CAGACGGACAGACAGACAGGGCTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
........CACTAG--GC-----GCTGATAGGGACGG--AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000001000
.............G--GC-----GCTGATAGGGACGG--AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000001000
...........TAG--GC-----GCTGATAGGGACGG--ACAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
.......................................ACAGACGGACAGACAGACAGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000100
........................................................................................................................................CTTCTGGACGTTACACA-CATCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000010
.........................................AGACGGACAGACAGACAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.............................AGGGACGG--ACAGACGGACAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
..................................................................................................................................................................................................C-ATTT------------------------------TGAGTATCGGGTATAAAAATAC............................................................................................................................................................................................................................................................................................................................................................................................27200.0510000001000
....................................................................................................................................ATTCCTTCTGGACGTTACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000010
..............................................................................TTGATGCTGATCAAGAATATA--------TATAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
.......GCACTAG--GC-----GCTGATAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000010
................................GACGG--ACAGACGGACAGACAGACAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
...............................................................................TGATGCTGATCAAGAATATA--------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
......AGCACTAG--GC-----GCTGATAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.........................TGATAGGGACGG--ACAGACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...........................ATAGGGACGG--ACAGACGGACAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000100
..........CTAG--GC-----GCTGATAGGGACGG--ACAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000010
........CACTAG--GC-----GCTGATAGGGACGG--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
......................................................................................................................................................................................................................................TGAGTATCGGGTATAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
...........................................ACGGACAGACAGACAGGGCTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
.......................................................................................ATCAAGAATATA--------TATACTTTA-TGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
............AG--GC-----GCTGATAGGGACGG--ACAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
....................................................................................................................................................................TACCACAAATCTA-ATATAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.................C-----GCTGATAGGGACGG--ACAGACGGACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000100
.........................................AGACGGACAGACAGACAGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
...........................................ACGGACAGACAGACAGGGCTCAATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000100
......................................................................................................................................................................................................TT------------------------------TGAGTATCGGGTATAAAAATA.............................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
........................................CAGACGGACAGACAGACAGGGCTCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000010
.............G--GC-----GCTGATAGGGACGG--A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000010
.................................................................................................................................................................TTTTACCACAAATCTA-ATATACCCC-A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000100
...TTGAGCACTAG--GC-----GCTGATAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
...................................................................................GCTGATCAAGAATATA--------TATACTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
..............................................................................TTGATGCTGATCAAGAATATA--------TAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
........CACTAG--GC-----GCTGATAGGGACGG--A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000100
.........................................AGACGGACAGACAGACAGGGCTCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
......................................................................CTCGGCTATTGATGCTGATCAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
...............................GGACGG--ACAGACGGACAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
...................................................................................GCTGATCAAGAATATA--------TATACTTTA-TG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
..........................................GACGGACAGACAGACAGGGCTCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000001
...............................................................................................................................................................................................ACTC-ATTT------------------------------TGAGTATCGGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
..........................................................................................................................................................................AAATCTA-ATATACCCC-AATACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
......................................................................................................................................................................CCACAAATCTA-ATATACCCC-A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
................................................................................................................................................................................................CTC-ATTT------------------------------TGAGTATCGGGTAT....................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
...........TAG--GC-----GCTGATAGGGACGG--ACAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000010
..................................................................................TGCTGATCAAGAATATA--------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000010
..............................................................................................................................GAAACGATTCCTTCTGGACGTTACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
..........CTAG--GC-----GCTGATAGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.0510000000010
...........................ATAGGGACGG--ACAGACGGACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
............AG--GC-----GCTGATAGGGACGG--A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000001
.......GCACTAG--GC-----GCTGATAGGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000000
........................CTGATAGGGACGG--ACAGACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...............................................................................................................................................................................TA-ATATACCCC-AATACTC-AT..................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510010000000
................GC-----GCTGATAGGGACGG--ACAGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000010
.......................................................................................................................................................................................................T------------------------------TGAGTATCGGGTATAAAAATAC............................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.......................................ACAGACGGACAGACAGACAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
......AGCACTAG--GC-----GCTGATAGGGACGG--A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000010
.................................ACGG--ACAGACGGACAGACAGACAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
droPer2
TCTTTGAGAACTAG--TC-----GCTCAT----ATG-GG-CGGACGGACAGACGGACATGGCTCAATCGACTCTGCTATTGATGCTGATCAAGAATATATGTACATATATCCTTAA-TGGGG-TCGGAAACGCTTCCTTCTGGACGTTACACA-CATCCATTTTCACCACAAATCTA--AATACCCC-TATACTC-ATTT------------------------------TTTTTTTATTGTATAATTATTA--------------------------------------------------------------------TTTTTG----------------------------------------ATTTTTACTGAAT--------------AA-----------T------------------------TATTATT-A----TA----------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------T--TTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................CGGACGGACAGACGGACATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061000001
..........................................................................................................................................TCTGGACGTTACACA-CATCCATTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.................................................................ATCGACTCTGCTATTGATGCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
...............................................ACAGACGGACATGGCTCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000100
......................................................................................................................GGGG-TCGGAAACGCTTCCTTCTGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
droAna3
TT--------------GC-----GT--------------AGAAACAGACAGACGGACATGCTTATATTGACTCAGGAGGTGATCCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGAGATGTCTCCTTCACTGCGTTGCACA-CCT-------TTGACCAAAATTA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAAAAACAT-GTTGGT--T-------------TTTGCG----------------------------TG------CCAGCATCA-----AATA-----TCGAAA--------------------------------T--------------TA-----------T--------------------------------------------------TACT--AT----------------------------TTAGTTCTCTCAGTGTAACTAGC-CGCTGCGGTCAACTAAT-------------------------------------------------------------------------------------T------G--CCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGTAACTAGC-CGCTGCGGTCAA.......................................................................................................2611.001100000
..........................................AACAGACAGACGGACATGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.357000034
...................................................................................................................................GTCTCCTTCACTGCGTTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.306000006
..................................................................................................................................TGTCTCCTTCACTGCGTTGCACA-CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.295050000
.....................................................................................................................................CTCCTTCACTGCGTTGCACA-CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22190.265140000
............................................................CTTATATTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.255050000
.............................................................TTATATTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.204040000
.........................................................ATGCTTATATTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.204040000
....................................................................................................................................TCTCCTTCACTGCGTTGCACA-CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23190.163030000
........................................................CATGCTTATATTGACTCAGGAGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153300000
......................................................................................................................................................................GACCAAAATTA-TAATACCCT-CT--------------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153030000
......................................................................................................................................TCCTTCACTGCGTTGCACA-CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153030000
..........................................................TGCTTATATTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153120000
.......................................................................................................................................................................ACCAAAATTA-TAATACCCT-CT--------------GCAAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102200000
................................................................................................................................GATGTCTCCTTCACTGCGTTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000020
........................................................CATGCTTATATTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.102020000
...........................................................GCTTATATTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102020000
.................................................................ATTGACTCAGGAGGTGATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000020
...............................................................................................TATA--------TATACTTTA-TAGGG-TCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102200000
..................................................................................................................TA-TAGGG-TCGGAGATGTCTCCTTCACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102200000
....................................................................................................................................TCTCCTTCACTGCGTTGCACA-CCT-------TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.071010000
......................................................................................................................................TCCTTCACTGCGTTGCACA-CCT-------TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.071010000
...........................................................................................................................................CACTGCGTTGCACA-CCT-------TTGACCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.071001000
.........................................................................................................................................TTCACTGCGTTGCACA-CCT-------TTGACCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27150.071100000
.........................................................................................................................................TTCACTGCGTTGCACA-CCT-------TTGACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.061100000
..........................................................TGCTTATATTGACTCAGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.........................................................ATGCTTATATTGACTCAGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.........................................................ATGCTTATATTGACTCAGGAGGTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
..............................................................TATATTGACTCAGGAGGTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
...........................................................GCTTATATTGACTCAGGAGGTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
.T--------------GC-----GT--------------AGAAACAGACAGACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
............................................................CTTATATTGACTCAGGAGGTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
..........................................................TGCTTATATTGACTCAGGAGGTGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..............................................GACAGACGGACATGCTTATATTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
...................................................................TGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
................GC-----GT--------------AGAAACAGACAGACGGACATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..........................................................TGCTTATATTGACTCAGGAGGTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000
.......................................................ACATGCTTATATTGACTCAGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.........................................................ATGCTTATATTGACTCAGGAGGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..............................................................TATATTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000001
.................................................................ATTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
.T--------------GC-----GT--------------AGAAACAGACAGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
............................................................CTTATATTGACTCAGGAGGTGATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
..............................................................TATATTGACTCAGGAGGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
...........................................................GCTTATATTGACTCAGGAGGTGATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000001
........................................................CATGCTTATATTGACTCAGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.........................................................................AGGAGGTGATCCTGATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
........................T--------------AGAAACAGACAGACGGACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
..................................................................TTGACTCAGGAGGTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
...........................................................GCTTATATTGACTCAGGAGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...........................................................................................................................................................CT-------TTGACCAAAATTA-TAATACCCT-CT--------------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
..........................................................TGCTTATATTGACTCAGGAGGTGATCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051100000
................................................................TATTGACTCAGGAGGTGATCCTGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
droBip1
--------------------------------------------CGGACAGACTGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGAGATGTCTCCTTCACTGCGTTGCACA-CTT-------TTGAACAAAATTA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAAAAATAT-A--AAG--------------------------------------------------T------------------------------------ATTCATTTGCAACACCTTTGCTCTTCGATCAT----------------------------------------------------------------------------------------------------------------------------------------------------------TTCTCCATTTCAGCATGGCTTCATTAAGGGGTTATATACAGT-------------------------------------------------------TGCSizeHit CountTotal NormTotal
No Reads
droKik1
TGAGG--GACTAGTTTGC-----GT--------------AGAAACAGACAGACGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGTAACGTCTCCTTCACTGCGTTGCAAAACTT-------CTGACTGTAATTA-TAATACCCT-----------------GCAAGGGAATAAAAAAATTCAAAGTT-----------------------GTTTGT--T-------------TTTA--------------------AATAATATAAA--------------TGTAACTCCCATTGT----------------------------ACTTTGGCCAC------------------------------------------------------------------------------------------------------------------------TGTGACAGCAGCATCAGCGCCCGGTTTT-----AAC---------------------------------------------------------------------------------------------CTCCGSizeHit CountTotal NormTotal
No Reads
droFic1
ACTGAGAGACTAGTTTGCGAAACAGACAG----GAA-GA-CAGACGGACAGACGTACAGACGTATTTCGATTCAGATGGTGATGCTGATCAAGAATATA--------TATACTTTA-TGGGG-TCTAAGGTGTCTCCTTCACTGCGTTGCAAA-CTT-------CTGACTGAAATTA-TAATACCCT-TTTGCTCT--------GCAAGGGTA------------------------------TAAATATAT-GTCGG--AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-A--------------------------------------------------------------------------------------------------------------------------GGTTCTTTCTTCCATTTTCACTAAACTTTTATTATTTGTTGCGCCAGCACAGCGAGTTCCGCTCA--CTTSizeHit CountTotal NormTotal
No Reads
droEle1
ACTGAGAGACTTGTTTGC-----GT--------AGA-AA-CGGACGGACAGACGGGCATGGCTAGATCGACTTTCCTAGTGATGCTGATCAAGAATATA--------TATACGTTA-TAGGG-TCGGAGATGTCTCCTTCACTGAGTTGCAAA-CTT-------CTGACTGAAATTA-TAATACCCT-TT--------------GCAAGGGTA------------------------------TAAAAACAA-A--GGC---------------------------------------------------------------------------------------ATACAGTTCTTAC--CCCTGATCTTAGCTGATCGCTACCTGAAATCAGG-----------C-------------------------AATGTT-G-----------CGTCATTACC--AG----------------------------TCGG------------------C------------------------------------------------------------------------------------------------------------A-C--CCTSizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------CGGACAGACGGACATGGCTATATCAACTCAGGAGGTGATCCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGAGATGTCTCCTTCACTGCGTTGCACA-CTT-------TTGACCAAAATTA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAATAAGTA--------------------------------------------------------------------TTTTTA----------------------------------------A----------------------------------------------------------------TAACGTT-A----TAATTTT--AAAATAAAG-AG-----TATATTTCG--------------------------------ACAGCGCGCTGTGGCGAA--------------------------------------------T---------------------------------------------T------TCTTCGSizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------CGGACAGACGGACATGGCTAGATCGACTCGTCTTGTGGCGCTGATCAAGAATATT--------TATACTTTA-TGGGG-TCGGAAACGTCTCCTTCACTGCGTTGCAAA-CTT-------CTGACTGAAATTA-TTATACCCT-CT--------------GCAAGGGTA------------------------------TAAAAAAAT-C--GAG-AAGGAAATAAAATATTAAAGA----------------------------TATTTTTTCTAA------------TG-----CAAATT-----------------------------------------------GAGTACTCATATAGAATGTATGAAAGGCGAATTATATT--------------------------TGTT--TG----------------------------C------------------------------------------------------------------------------------------------------------------------------------G--GCCSizeHit CountTotal NormTotal
No Reads
droTak1
--------------------------------------------CGGACAGACGGACATGGCTAGATCGACTCGTCTTGTGATGCTGATCAAGAATATA--------TATACTTTA-TGGGG-TCGGAAACGTCTCCTTCACTGCGTTGCAAA-CTT-------CTGACTGAAATCA-TAATACCCT-CT--------------GCAAGGGTA------------------------------TAAATAAT--GTTAAC--T-------------TTACAGTGCTAATA--------------------T--------------TCTGACTCCCATTGTAT----------------------------------------------------TG-----------A--------------------------------------------------TA---------------------T---ATA-----T-AGCTCAGGCC--CGGCACTTTCCCCCTTTCCCCAA---TCC-------------------------------------------------------------------------------------------C--CCCSizeHit CountTotal NormTotal
No Reads
droEug1
TCTCA-----------GT-----GTTCAT----ACG-GA-CGGACGGACAGACGGACATGGCTCAATCGAATTCGCTATTAATCCTGATCAAGAATATA--------TATACTTTA-TAGGG-TCGGAAACGTTTCCTTCTATCTGTTACATA-CTT-------ATCAACGAATCTA-ACATTCCCT-TTTACTCT--------A-------------------------CGAGTGAGGGGTATAATAATTT-T--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAATTACCCCGTATAG-T--TTTTTTGCAATCCATCGTAACCGA--------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotal
No Reads
dm3
TTAATAAGATCTCG--AC-----GT--------------TCATACGGACAGTCGGACATGGCTGTATCGACTCGGCTATTGATCCTAATTAAGAATATA--------CATACTTTA-TATGG-TTGGAAACGCTTCCTTCTGCCTGTTGCATA-CTT-------TTCAACGAATAAA-GTATACCCT-TTTACTTC--------A-------------------------CGAAGAACGGGTATAAAACGCTTATTAGCTTAA---------------TAAATGTTTTATATAATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------TATT--GTTT--A---A--TA--C-------------------------------------------------------------------------------------------------------------------------------------------------A--TCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................TC--------A-------------------------CGAAGAACGGGTATAAAACGCT............................................................................................................................................................................................................................................................................................................................................................................................25126.00260000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100100020000000000000000000000000000000000000100000120000120200000000000100000000000000000000000000000000000000000000000000000000000000000000000001100020000201000000000000000110000000
.................................................................................................................................................................................................TTC--------A-------------------------CGAAGAACGGGTATAAAACGCT............................................................................................................................................................................................................................................................................................................................................................................................26119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000160000110000000000000000000000000000000000000000000000000200000010100000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000002000000
.................................................................................................................TTA-TATGG-TTGGAAACGCTTCCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25610.676400000000000000000000000000000000000000105000302000102100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000011001300000000000000000000000000000000000000000000000000010000000000000100022000000000000000000000000000000000000000000000000000000000000011000064100000001130000000000000000432000000
.................................................................................................................................................................................................TTC--------A-------------------------CGAAGAACGGGTATAAAACGC.............................................................................................................................................................................................................................................................................................................................................................................................25110.00100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010100000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000211000000000000000000000000
..............................................GACAGTCGGACATGGCTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1918.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TATTGATCCTAATTAAGAATATA--------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................T-------TTCAACGAATAAA-GTATACCCT-TT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2535.33160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000030301050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................T-------TTCAACGAATAAA-GTATACCCT-TTTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2835.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040101270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TC--------A-------------------------CGAAGAACGGGTATAAAACGC.............................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
............................................CGGACAGTCGGACATGGCTGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TAATAAGATCTCG--AC-----GT--------------TCATACGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000200000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................TT-------TTCAACGAATAAA-GTATACCCT-TT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2624.5090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020202030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CATACGGACAGTCGGACATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCATACGGACAGTCGGACATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000200000000000000000000000000
............................................................................................................................................................T-------TTCAACGAATAAA-GTATACCCT-TTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2634.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030401130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AATAAGATCTCG--AC-----GT--------------TCATACGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................TT-------TTCAACGAATAAA-GTATACCCT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2523.5070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010201030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
-----------------C-----GT--------------TCATACGGACAGACGTACATGGCCAGATC-----GGCATTTGAACCTGATCAAGAATATA--------TATACTTTA-TATGA-TCTGAAACGCTTTCTTCTGCCTGTTACATA-CTT-------TTCAACCAATCTA-GTATACGCT-TTTACTGT--------ACAA-------------------------GTAACTGGTATAAAAATAT-A--CATTTAACAAAAAAAACTTTTAATA----------------------------TA------TTAATTTAC-----TTTA-----TAAATA-----------------------------------------------TA-----------C--------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
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..............................................................................................ATATA--------TATACTTTA-TATGA-TCTGAAACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000001000000000
............................................................................................GAATATA--------TATACTTTA-TATGA-TCTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000010000000
.............................................................................................................TACTTTA-TATGA-TCTGAAACGCTTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000010000000000
............................................................................................................................................................................................TTTACTGT--------ACAA-------------------------GTAACTGGTATAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................2820.50100000001000000000
..........................................TACGGACAGACGTACATGGCCAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000100000000
..........................................TACGGACAGACGTACATGGCCAGATC-----GG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000100000000
.............................................................................................................................................................................................TTACTGT--------ACAA-------------------------GTAACTGGTATAAAA................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000000010000
...........................................................................................................................TCTGAAACGCTTTCTTCTGCCTGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000100000000
.............................................GGACAGACGTACATGGCCAGATC-----GGCATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.50100000000010000000
................................................CAGACGTACATGGCCAGATC-----GGCATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000100000000
..............................................................................................................................................................................................TACTGT--------ACAA-------------------------GTAACTGGTATAAAAATA.............................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000010000000
..............................................GACAGACGTACATGGCCAGATC-----GGCATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000001000000000
...........................................................................................................TATACTTTA-TATGA-TCTGAAACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000100000000
.................................................................................................................TTA-TATGA-TCTGAAACGCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000000010000000
..........................................................TGGCCAGATC-----GGCATTTGAACCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000000010000
............................................................................................................ATACTTTA-TATGA-TCTGAAACGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000010000000000
.........................................................................................................................................................................................................................................................TAT-A--CATTTAACAAAAAAAACTTTTAA.................................................................................................................................................................................................................................................................................................................................................................2720.50100000000100000000
.............................................................................................................TACTTTA-TATGA-TCTGAAACGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100000000100000000
............................................CGGACAGACGTACATGGCCAGATC-----GGCATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3020.50100000010000000000
...................................................................................................................................................TACATA-CTT-------TTCAACCAATCTA-GTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.50200000001100000000
............................................CGGACAGACGTACATGGCCAGATC-----GGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.50100000001000000000
.....................................................................................................................................TTTCTTCTGCCTGTTACATA-CT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22190.47900000024300000000
......................................................................................................................................TTCTTCTGCCTGTTACATA-CTT-------TTCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27170.47800000001230020000
....................................................................................................................................................ACATA-CTT-------TTCAACCAATCTA-GT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.40200000020000000000
...............................................................................................................................................CTGTTACATA-CTT-------TTCAACCAATCTA-GT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.33100000000010000000
...............................................................................................................................................CTGTTACATA-CTT-------TTCAACCAATCTA-G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33100010000000000000
...............................................................................TGAACCTGATCAAGAATATA--------TATACTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.33100000000100000000
.................C-----GT--------------TCATACGGACAGACGTACATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.20100000001000000000
........................................................................................................................................CTTCTGCCTGTTACATA-CTT-------TTCAACCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2950.20100000000010000000
..........................................TACGGACAGACGTACATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.17100000000100000000
..........................................TACGGACAGACGTACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1760.17100000000001000000
.............................................................................................................................................................................................................CAA-------------------------GTAACTGGTATAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................1970.14100001000000000000
..............................................................................................ATATA--------TATACTTTA-TATGA-TCTGAACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.14100000000010000000
......................................................................................................................................TTCTTCTGCCTGTTACATA-CTT-------TTCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................28150.13200000000100010000
....................................................................................................................................................ACATA-CTT-------TTCAACCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.13100000000001000000
......................................................................................................................................TTCTTCTGCCTGTTACATA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200000001010000000
.......................................................................................................................................TCTTCTGCCTGTTACATA-CTT-------TTCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27150.07100000000010000000
......................................................................................................................................TTCTTCTGCCTGTTACATA-CTT-------TTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26170.06100000000000010000
.......................................................................................................................................TCTTCTGCCTGTTACATA-CTT-------TTCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26170.06100000000100000000
......................................................................................................................................TTCTTCTGCCTGTTACATA-CTT-------TTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25180.06100000000000010000
.....................................................................................................................................TTTCTTCTGCCTGTTACATA-CTT-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23190.05100000000000010000
....................................................................................................................................CTTTCTTCTGCCTGTTACATA-CTT-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.05100000010000000000
......................................................................................................................................TTCTTCTGCCTGTTACATA-CTT-------TTCAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000100000000
.......................................................................................................................................TCTTCTGCCTGTTACATA-CT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000010000000
.......................................................................................................................................TCTTCTGCCTGTTACATA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000100000000
.......................................................................................................................................TCTTCTGCCTGTTACATA-CTT-------TTCAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000100000000
......................................................................................................................................TTCTTCTGCCTGTTACATA-AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000000001000
.....................................................................................................................................TTTCTTCTGCCTGTTACATA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000100000000
...............................................................................................................................AAACGCTTTCTTCTGCCTGTTACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010000000000000
........................T--------------TCATACGGACAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
....................................................................................................................................................ACATA-CTT-------TTCAACCAATCTA-GTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000000010000
.......................................................................................................................................TCTTCTGCCTGTTACATA-CTT-------TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000000001000
droSec2
TCTCG-----------AC-----GT--------------TCATACGGACAGACGAACATGGCTAGATCGACTCGGCTATTGATCCTGATCAAGAATATA--------TATACTTAA-TATGG-TCGGAAACGCTTCCTTCGGCGTGTTACATA-CTT-------TTCAACGAATCTG-GTATACCCT-TTTGCTCT--------T-------------------------CGAGTAACGTGTATAAATATGA-AAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------------------------------------------A--TTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................TCGACTCGGCTATTGATCCTGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.903838000
..............................................GACAGACGAACATGGCTAGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310001
..........................................................TGGCTAGATCGACTCGGCTATTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.3060060
..............................................................TAGATCGACTCGGCTATTGATCCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.2042020
..........................................................TGGCTAGATCGACTCGGCTATTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1022000
..........................................................TGGCTAGATCGACTCGGCTATTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1022000
..............................................................TAGATCGACTCGGCTATTGATCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1022000
............................................................................................................................................................T-------TTCAACGAATCTG-GTATACCCT-TTTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
................................................................................................................................................TGTTACATA-CTT-------TTCAACGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510001
..................................................................TCGACTCGGCTATTGATCCTGATCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010
.............................................................CTAGATCGACTCGGCTATTGATCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
..................................................................TCGACTCGGCTATTGATCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
........................................................................CGGCTATTGATCCTGATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100
.......................................................ACATGGCTAGATCGACTCGGCTAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
..................................................................TCGACTCGGCTATTGATCCTGATCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
......................................................................CTCGGCTATTGATCCTGATCAAGAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
........................................................CATGGCTAGATCGACTCGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
...............................................................AGATCGACTCGGCTATTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
..................................................................TCGACTCGGCTATTGATCCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100
...................................................................CGACTCGGCTATTGATCCTGATCAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0511000
droYak3
--------------------------------------------CGGACAGACGGACATGGCCAGATTGACTCGGCTACTGATCCTGATCAAGAATATA--------TATACTTTA-TATGG-TCGGAAACGCTTCCTTCTGCCTGTTACATA-CTT-------TTCAACGAATCTA-GTATACCCT-TTTACTCT--------A-------------------------CGAGTAACGGGTATAATAAAGT-GACTA--CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-G--------------------------------------------------------------------------------------------------------------------------GTTGTTTATTATTGCTCTCCTTAGGCCCAAATTAATTAGTGCCTCACCAC--------CGGCACG--CCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTAATTAGTGCCTCACCAC--------CG..........2411.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------------------------------------------------------------------------------------GTTGTTTATTATTGCTCTCCTTAGGCC...........................................2820.50101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTATTATTGCTCTCCTTAGGCCCA.........................................2720.50101000000000
.....................................................................................................................TATGG-TCGGAAACGCTTCCTTCTGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.40800800000000
................................................................................................................................................................................................................................................................TA--CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-G--------------------------------------------------------------------------------------------------------------------------GTTGTTTATTATTGCTC.....................................................25100.20201100000000
..............................................................................................................................................................................................TACTCT--------A-------------------------CGAGTAACGGGTATAATAAA..............................................................................................................................................................................................................................................................................................................................................................................................27200.15302100000000
......................................................................CTCGGCTACTGATCCTGATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000000000
.....................................................................ACTCGGCTACTGATCCTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
..................................................................................................................................................................................................CT--------A-------------------------CGAGTAACGGGTATAAT.................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000010000
..................................................GACGGACATGGCCAGATTGACTCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
....................................................................................CTGATCAAGAATATA--------TATACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
..................................................GACGGACATGGCCAGATTGACTCGGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100100000000
droEre2
--------------------------------------------CGGACGAACGGACTTGGCCAGATCCAGTCGGCTATTGATCCAGATCAATAATATA----TATATACACTTTA-TATGG-TCGGAAACGCTTCCTTCTGCATGTTACATA-CTT-------TTCAACAAATCTA-GTATATCCT-AA--------------AAAAAAAC-----------TAACGTA-----------------------ATTTTT--T-------------ATTT--------------------GATAGTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTCAGAACCCA-----A-GGGACAAGGCGTCGTCA-------------------------------------------------------------------------------------------------------------------G--TGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................ACATA-CTT-------TTCAACAAATCTA-GT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................23180.0611000000

Generated: 05/18/2015 at 06:34 AM