ID:

dwi_3083

 Coordinate:

scf2_1100000004934:23546-23696 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-0.6 0.0 0.15

Flybase annnotation

CDS [Dwil\GK10774-cds]; exon [dwil_GLEANR_10987:3]; intron [Dwil\GK10774-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-5_DWil-I-intLTRGypsy-
mature
  1. scf2_1100000004323:2060-2082 +
  2. scf2_1100000004513:3361331-3361353 -
  3. scf2_1100000004869:13293-13315 +
  4. scf2_1100000004940:18014-18036 -
  5. scf2_1100000004933:227596-227618 +
  6. dwi_3083  scf2_1100000004934:23605-23627 -
  7. scf2_1100000004961:2074890-2074912 -
star
  1. scf2_1100000003907:9761-9783 +
  2. scf2_1100000004323:2097-2119 +
  3. scf2_1100000004721:44268-44290 -
  4. scf2_1100000004721:284366-284388 -
  5. scf2_1100000004756:126478-126500 +
  6. scf2_1100000004756:139725-139747 +
  7. scf2_1100000004869:13331-13353 +
  8. scf2_1100000004940:17976-17998 -
  9. scf2_1100000004933:227634-227656 +
  10. dwi_3083  scf2_1100000004934:23567-23589 -
  11. scf2_1100000004954:1508282-1508304 +
  12. scf2_1100000004956:704971-704993 +
  13. scf2_1100000004958:918732-918754 +
  14. scf2_1100000004961:2074852-2074874 -
  15. scf2_1100000004961:2170331-2170353 +
  16. scf2_1100000004967:4289431-4289453 -
  17. scf2_1100000004968:2502767-2502789 -
  18. scf2_1100000004968:3235678-3235700 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AACTGCAAATATTAACCACAACACAAAACATGAACATAAATCTATATCTATGAAAACTTTATTTTAAATCAATTGGAATAAATGCCAGAAGAAAGCAGAAGCAGCGGTTGGAACCATCTGATAAATCAAGCGAACCAAAAGAAAACCAACCAATCAACCAACAAGGAACACGAATGAACAGTGAAAATATTCCCTTTGCAGAATCTGCTCCTATCGAGCAAAGGGATGCACCGACGCTAGAAGAAGCGTTA
***********************************************************************************************************************......(((..((..((............................))....))..)))...*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body		 M020
head
.......................................................................................................................GATAAATCAAGCGAACCAAAAGA............................................................................................................. 23 0 7 0.71 5 4 1 0 0
.............................................................................................AGCAGAAGCAGCGGTTGGAACCAT...................................................................................................................................... 24 0 3 0.33 1 0 1 0 0
.............................................................................................AGCAGAAGGACCGGTTGGA........................................................................................................................................... 19 2 3 0.33 1 0 0 1 0
.........................................................................................................GGTTGGAACCATCTGATA................................................................................................................................ 18 0 4 0.25 1 1 0 0 0
............................................................................................................................ATCAAGCGAACCAAAAGAAAACCAACC.................................................................................................... 27 0 6 0.17 1 0 0 1 0
...................................................................................................................ATCTGATAAATCAAGCGAACCAAAA............................................................................................................... 25 0 7 0.14 1 1 0 0 0
...................................................................................................................ATCTGATAAATCAAGCGAACC................................................................................................................... 21 0 7 0.14 1 0 0 0 1
...........................................................................................................................AATCAAGCGAACCAAAAG.............................................................................................................. 18 0 7 0.14 1 1 0 0 0
..........................................................................................................................AAATCAAGCGAACCAAAAGAAA........................................................................................................... 22 0 7 0.14 1 1 0 0 0
..........................................................................................................................AAATCAAGCGAACCAAAA............................................................................................................... 18 0 7 0.14 1 1 0 0 0
.....................................................................................................................CTGATAAATCAAGCGAACCAAAAGA............................................................................................................. 25 0 7 0.14 1 0 0 1 0
.......................................................................................................................GATAAATCAAGCGAACCAAAAGAA............................................................................................................ 24 0 7 0.14 1 1 0 0 0
.......................................................................................................................GATAAATCAAGCGAACCAAAA............................................................................................................... 21 0 7 0.14 1 0 1 0 0
..........................................................................................................................AAATCAAGCGAACCAAAAGA............................................................................................................. 20 0 7 0.14 1 1 0 0 0
.......................................................................................................................GATAAATCAAGCAAACCAAAAGAAAAC......................................................................................................... 27 1 7 0.14 1 1 0 0 0
...................................................................................................................ATCTGATAAATCAAGCGAACCAAAAGAA............................................................................................................ 28 0 7 0.14 1 0 0 0 1
....................................................................................................................TCTGATAAATCAAGCGAACCAAAAGA............................................................................................................. 26 0 7 0.14 1 0 1 0 0
.......................................................................................................................GATAAATCAAGCGAACCAAAAGAAAACC........................................................................................................ 28 0 7 0.14 1 1 0 0 0
..................................................................................................................CATCTGATAAATCAAGCGAACCAAAA............................................................................................................... 26 0 7 0.14 1 0 1 0 0
............................................................................................................................ATCAAGCGAACCAAAAGAAAAC......................................................................................................... 22 0 7 0.14 1 1 0 0 0
..............................................................................................................GAACCATCTGATAAATCAAGCGAACC................................................................................................................... 26 0 7 0.14 1 0 0 1 0
.............................................................................................................GGAACCATCTGATAAATCAAGCGAAC.................................................................................................................... 26 0 7 0.14 1 0 0 1 0
...............................................................................................................................AAGCGAACCAAAAGAAAACCAACC.................................................................................................... 24 0 7 0.14 1 0 1 0 0
....................................................................................................................TCTGATAAATCAAGCGAAC.................................................................................................................... 19 0 7 0.14 1 0 1 0 0
..............................................................................................................GAACCATCTGATAAATCAAGCGA...................................................................................................................... 23 0 7 0.14 1 0 0 1 0
........................................................................................................................ATAAATCAAGCGAACCAAAAGA............................................................................................................. 22 0 7 0.14 1 1 0 0 0
..............................................................................................................GAACCATCTGATAAATCAAGC........................................................................................................................ 21 0 7 0.14 1 1 0 0 0
..................................................................................................................CATCTGATAAATCAAGCGAACCAAAAGA............................................................................................................. 28 0 7 0.14 1 0 1 0 0
.......................................................................................................................GATAAATCAAGCGAACCAAAAGAAA........................................................................................................... 25 0 7 0.14 1 1 0 0 0
....................................................................................................................TCTGATAAATCAAGCGAACC................................................................................................................... 20 0 7 0.14 1 0 0 0 1
........................................................................................................................ATAAATCAAGCGAACCAAAA............................................................................................................... 20 0 7 0.14 1 1 0 0 0
...............................................................................................................AACCATCTGATAAATCAAGCGAACC................................................................................................................... 25 0 7 0.14 1 1 0 0 0
.......................................................................................................................GATAAATCAAGCGAACCAAAAGAAAA.......................................................................................................... 26 0 7 0.14 1 1 0 0 0
.........................................................................................................................TAAATCAAGCGAACCAAAAGA............................................................................................................. 21 0 7 0.14 1 1 0 0 0
.......................................................................................................................GATAAATCAAGCGAACCAAAAG.............................................................................................................. 22 0 7 0.14 1 1 0 0 0
..............................................................................................................GAACCATCTGATAAATCAAG......................................................................................................................... 20 0 7 0.14 1 0 1 0 0
......................................................................................................................TGATAAATCAAGCGAACCAAAA............................................................................................................... 22 0 7 0.14 1 0 1 0 0
...............................................................................................................................AAGCGAACCAAAAGAAACCC........................................................................................................ 20 1 8 0.13 1 1 0 0 0
...............................................................................................................................AAGCGAACCAAAAGAAAACC........................................................................................................ 20 0 8 0.13 1 1 0 0 0
.....................................................................................CAGAATAAAGCAGAAGCA.................................................................................................................................................... 18 1 9 0.11 1 1 0 0 0
.............................................................................................................................................................CCAACAAGGAACACGAATGAACA....................................................................... 23 0 18 0.11 2 0 2 0 0
.............................................................................................................................................................................................................................AGGGATGCACCGACGCTAGAAGAAG..... 25 0 12 0.08 1 0 1 0 0
...........................................................................................................................................................................................................................AAAGGGATGCACCGACGCTAGAAGA....... 25 0 12 0.08 1 1 0 0 0
................................................................................................................................AGCGAACCAAAAGAAAACC........................................................................................................ 19 0 14 0.07 1 1 0 0 0
................................................................................................................................................................ACAAGGAACACGAATGAACAGTGA................................................................... 24 0 18 0.06 1 0 1 0 0
.............................................................................................................................................................CCAACAAGGAACACGAATGAACAG...................................................................... 24 0 18 0.06 1 0 1 0 0
.............................................................................................................................................................CCAACAAGGAACACGAAT............................................................................ 18 0 18 0.06 1 0 1 0 0
......................................................................................................................................................CAATCAACCAACAAGGAACACGA.............................................................................. 23 0 19 0.05 1 0 1 0 0
...........................................................................................................................................................................................................TCTGCTCCTATCTAGCAAAGGGATG....................... 25 1 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................TCTGCTCCTATCGAGCAAAGGGATGCA..................... 27 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

TTGACGTTTATAATTGGTGTTGTGTTTTGTACTTGTATTTAGATATAGATACTTTTGAAATAAAATTTAGTTAACCTTATTTACGGTCTTCTTTCGTCTTCGTCGCCAACCTTGGTAGACTATTTAGTTCGCTTGGTTTTCTTTTGGTTGGTTAGTTGGTTGTTCCTTGTGCTTACTTGTCACTTTTATAAGGGAAACGTCTTAGACGAGGATAGCTCGTTTCCCTACGTGGCTGCGATCTTCTTCGCAAT
***********************************************************************......(((..((..((............................))....))..)))...*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
.....................................................................................................................................................................................................................AGCTCGTTTCCCTACGTGGCTGCGAT............ 26 0 20 2.95 59 8 45 4 2 0
................................................................................................................................................................TGTTCCTTGTGCTTACTTGTCACTT.................................................................. 25 0 18 2.83 51 46 5 0 0 0
.......................................................................................................CGCCAACCTTGGTAGACTATTTAGT........................................................................................................................... 25 0 3 1.33 4 4 0 0 0 0
................................................................................................................................................................TGTTCCTTGTGCTTACTTGTCACTTT................................................................. 26 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................GGTTTTCTTTTGGTTGGTTAGTTGGT........................................................................................... 26 0 8 0.88 7 4 3 0 0 0
.................................................................................................................................................................GTTCCTTGTGCTTACTTGTCACTT.................................................................. 24 0 18 0.78 14 13 1 0 0 0
....................................................................................................................................TTGGTTTTCTTTTGGTTGGTTAGT............................................................................................... 24 0 8 0.63 5 3 2 0 0 0
..............TGGTGTTGTGTTTTGTACTTGTAT..................................................................................................................................................................................................................... 24 0 5 0.40 2 0 2 0 0 0
................................................................................................................................................................TGTTCCTTGTGCTTACTTGTCACT................................................................... 24 0 18 0.39 7 7 0 0 0 0
..............................................................................................................................................................................................................CGAGGATAGCTCGTTTCCCTACGTGGCT................. 28 0 20 0.35 7 1 6 0 0 0
........................................................................................................GCCAACCTTGGTAGACTATTTAGT........................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
.................................................................................................CTTCGTCGCCAACCTTGGTAGACTAT................................................................................................................................ 26 0 3 0.33 1 1 0 0 0 0
................................................................................................................................................................................................................................CTACGTGGCTGCGATCTTCTTCGCAAT 27 0 12 0.33 4 1 3 0 0 0
.........................................................................................................CCAACCTTGGTAGACTATTTAGTTCGC....................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0
.............................................................................................................................................................GGTTGTTCCTTGTGCTTACTTGTCACTT.................................................................. 28 0 18 0.33 6 6 0 0 0 0
..............................................................................................CGTCTTCGTCGCCAACCTTGGT....................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0
....................................................................................GGTCTTCTTTCGTCTTCGTCGCCAACC............................................................................................................................................ 27 0 3 0.33 1 1 0 0 0 0
...............................................................................................................................................................................................................GAGGATAGCTCGTTTCCCTACGTGGCT................. 27 0 20 0.30 6 1 5 0 0 0
...........................................................................................................................................................................................................AGACGAGGATAGCTCGTTTCCCTACGT..................... 27 0 20 0.30 6 4 2 0 0 0
.....................................................................................................................................................................................................................AGCTCGTTTCCCTACGTGGCTGCGATCT.......... 28 0 20 0.30 6 4 2 0 0 0
.................................................................................................................................CGCTTGGTTTTCTTTTGGTTGGTTAGT............................................................................................... 27 0 7 0.29 2 2 0 0 0 0
....................................................................................................................AGACTATTTAGTTCGCTTGGTTTTCTT............................................................................................................ 27 0 7 0.29 2 1 1 0 0 0
................................................................................................................TGGTAGACTATTTAGTTCGCTTGGT.................................................................................................................. 25 0 7 0.29 2 0 2 0 0 0
...................................................................................................................................CTTGGTTTTCTTTTGGTTGGTTAGT............................................................................................... 25 0 8 0.25 2 2 0 0 0 0
.....................................................................................................................................TGGTTTTCTTTTGGTTGGTTAGT............................................................................................... 23 0 8 0.25 2 1 1 0 0 0
................................................................................................................................TCGCTTGGTTTTCTTTTGGTTGGT................................................................................................... 24 0 8 0.25 2 1 1 0 0 0
.....................GTGTTTTGTACTTGTATTTAGAT............................................................................................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
..........................................................................................................................................TTCTCTCGGTTGTTTAGTTGGTTGT........................................................................................ 25 3 9 0.22 2 0 2 0 0 0
...............................................................................................................................................................TTGTTCCTTGTGCTTACTTGTCACTT.................................................................. 26 0 18 0.22 4 3 1 0 0 0
...............GGTGTTGTGTTTTGTACTTGTATTT................................................................................................................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0
................GTGTTGTGTTTTGTACTTGTATT.................................................................................................................................................................................................................... 23 0 5 0.20 1 0 1 0 0 0
..........................................................................................................................................................................................................TAGACGAGGATAGCTCGTTTCCCTACGT..................... 28 0 20 0.20 4 4 0 0 0 0
...............GGTGTTGTGTTTTGTACTTGTATT.................................................................................................................................................................................................................... 24 0 5 0.20 1 0 1 0 0 0
.........................................................................................................................................................................................................................CGTTTCCCTACGTGGCTGCGATCTTCT....... 27 0 11 0.18 2 1 1 0 0 0
..................................................................................................................................................................................................................................ACGTGGCTGCGATCTTCTTCGCAAT 25 0 12 0.17 2 2 0 0 0 0
............................................................................................................................................................................................................................TTCCCTACGTGGCTGCGATCTTCT....... 24 0 12 0.17 2 2 0 0 0 0
...........................................................................................................................................TCTCTCGGTTGTTTAGTTGGTTGTT....................................................................................... 25 3 12 0.17 2 1 1 0 0 0
........................................................................................................................................................................................................................TCGTTTCCCTACGTGGCTGCGATCT.......... 25 0 20 0.15 3 2 1 0 0 0
...........................................................................................................................TTAGTTCGCTTGGTTTTCTTTTGGT....................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
......................................................................................................................ACTATTTAGTTCGCTTGGTTTTCTT............................................................................................................ 25 0 7 0.14 1 0 1 0 0 0
.....................................................................................................................GACTATTTAGTTCGCTTGGTTTTCTT............................................................................................................ 26 0 7 0.14 1 0 1 0 0 0
.....................................................................................................................GACTATTTAGTTCGCTTGGTTTTCT............................................................................................................. 25 0 7 0.14 1 0 1 0 0 0
............................................................................................................ACCTTGGTAGACTATTTAGTTCGCTT..................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0
................................................................................................................TGGTAGACTATTTAGTTCGCTTGGTT................................................................................................................. 26 0 7 0.14 1 0 1 0 0 0
..............................................................................................................................GTTCGCTTGGTTTTCTTTTGGTTGG.................................................................................................... 25 0 7 0.14 1 1 0 0 0 0
..................................................................................................................................GCTTGGTTTTCTTTTGGTTGGTTAGT............................................................................................... 26 0 7 0.14 1 0 1 0 0 0
..........................................................................................................................................TTCTCTCGGTTGTTTAGTTGGTTGTT....................................................................................... 26 3 8 0.13 1 1 0 0 0 0
......................................................................................................................................GGTTTTCTTTTGGTTGGTTAGT............................................................................................... 22 0 8 0.13 1 1 0 0 0 0
.................................................................................................................................CGCTTGGTTTTCTTTTGGTTG..................................................................................................... 21 0 8 0.13 1 1 0 0 0 0
................................................................................................................................TCGCTTGGTTTTCTTTTGGTTGGTT.................................................................................................. 25 0 8 0.13 1 1 0 0 0 0
..................................................................................................................................................GTTGGTTAGTTGGTTGTTCCTTGT................................................................................. 24 0 8 0.13 1 0 1 0 0 0
......................................................................................................................................GGTTTTCTTTTGGTTGGTTAGTT.............................................................................................. 23 0 8 0.13 1 0 1 0 0 0
...............................................................................................................................................TTGGTTGGTTAGTTGGTTGTTCCT.................................................................................... 24 0 8 0.13 1 0 1 0 0 0
.........................................................................................................................................................AGTTGGTTGTTCCTTGTGCTTACTT......................................................................... 25 0 18 0.11 2 2 0 0 0 0
......................................................................................................................................GGTTTTCTTTTGGTTGGT................................................................................................... 18 0 9 0.11 1 0 1 0 0 0
.....................................................................................................................................................GGTTAGTTGGTTGTTCCTTGTGCTT............................................................................. 25 0 18 0.11 2 2 0 0 0 0
.................................................................................................................................................................GTTCCTTGTGCTTACTTGTCACT................................................................... 23 0 18 0.11 2 2 0 0 0 0
................................................................................................................................................................TGTTCCTTGTGCTTACTTG........................................................................ 19 0 18 0.11 2 2 0 0 0 0
..............................................................................................................................................................GTTGTTCCTTGTGCTTACTTGTCACTT.................................................................. 27 0 18 0.11 2 2 0 0 0 0
......................................................................................................................................................................................................................GCTCGTTTCCCTACGTGGCTGCGATCT.......... 27 0 20 0.10 2 1 1 0 0 0
.........................................................................................................................................TTTCTCTCGGTTGTTTAGTTGGTTG......................................................................................... 25 3 10 0.10 1 1 0 0 0 0
............................................................................................................................................................................................................GACGAGGATAGCTCGTTTCCCTACGTGGC.................. 29 0 20 0.10 2 0 2 0 0 0
........................................................................................................................................................................................................................TCGTTTCCCTACGTGGCTGCGAT............ 23 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................................................AGGATAGCTCGTTTCCCTACGTGGCT................. 26 0 20 0.10 2 2 0 0 0 0
...................................................................................................................................................................................................................TTAGCTCGTTTCCCTACGTGGCTGCGAT............ 28 1 20 0.10 2 2 0 0 0 0
......................................................................................................................................................................................................................GCTCGTTTCCCTACGTGGCTGCGA............. 24 0 20 0.10 2 2 0 0 0 0
.........................................................................................................................................................................................................................CGTTTCCCTACGTGGCTGCGATCTT......... 25 0 11 0.09 1 0 1 0 0 0
.................................................................................................................................................................................................................................TACGTGGCTGCGATCTTCTTCGCAAT 26 0 12 0.08 1 1 0 0 0 0
............................................................................................................................................................................................................................TTCCCTACGTGGCTGCGATCTTCTT...... 25 0 12 0.08 1 1 0 0 0 0
...........................................................................................................................................TCTCTCGGTTGTTTAGTTGGTTGT........................................................................................ 24 3 13 0.08 1 1 0 0 0 0
...................................................................................................................................................................................................................................CGTGGCTGCGATCTTCTT...... 18 0 14 0.07 1 0 0 0 1 0
..............................................AGATAGTTGTGAAATAATATTT....................................................................................................................................................................................... 22 3 14 0.07 1 0 1 0 0 0
............................................................................................................................................CTCTCGGTTGTTTAGTTGGTTGT........................................................................................ 23 3 14 0.07 1 0 1 0 0 0
...................................................................................................................................................TTGGTTAGTTGGTTGTTCCTCGTGC............................................................................... 25 1 17 0.06 1 1 0 0 0 0
............................................................................................................................................................TGGTTTTTCCTTGTGCTTACTTGT....................................................................... 24 1 18 0.06 1 0 1 0 0 0
..................................................................................................................................................................TTCCTTGTGCTTACTTGTCACTT.................................................................. 23 0 18 0.06 1 1 0 0 0 0
...............................................................................................................................................................TTGTTCCTTGTGCTTACTTGTCACT................................................................... 25 0 18 0.06 1 0 1 0 0 0
.....................................................................................................................................................GGTTAGTTGGTTGTTCCTTGTGCT.............................................................................. 24 0 18 0.06 1 1 0 0 0 0
................................................................................................................................................................TGTTCCTTGTGCTGACTTGTCACTT.................................................................. 25 1 18 0.06 1 1 0 0 0 0
....................................................................................................................................................TGGTTAGTTGGTTGTTCCTTGT................................................................................. 22 0 18 0.06 1 0 1 0 0 0
.............................................................................................................................................................TATTGTTCCTTGTGCTTACTTGTCACTT.................................................................. 28 2 18 0.06 1 1 0 0 0 0
........................................................................................................................................................TAGTTGGTTGTTCCTTGTGCTTACTTGT....................................................................... 28 0 18 0.06 1 1 0 0 0 0
...........................................................................................................................................................TTGGTTGTTCCTTGTGCTTACTTGT....................................................................... 25 0 18 0.06 1 0 1 0 0 0
.............................................................................................................................................................ATTTGTTCCTTGTGCTTACTTGTCACTT.................................................................. 28 2 18 0.06 1 0 1 0 0 0
............................................................................................................................................................TGGTTGTTCCTTGTGCTTACTTGTCACTT.................................................................. 29 0 18 0.06 1 1 0 0 0 0
............................................................................................................................................................TGGTTGTTCCTTGTGCTTACTTGT....................................................................... 24 0 18 0.06 1 0 1 0 0 0
.........................................................................................................................................................AGTTGGTTGTTCCTTGTGCTTACT.......................................................................... 24 0 18 0.06 1 0 1 0 0 0
.......................................................................................................................................................TTAGTTGGTTGTTCCTTGTG................................................................................ 20 0 19 0.05 1 0 0 1 0 0
.......................................................................................................................................................TTAGTTGGTTGTTCCTTGTGCTT............................................................................. 23 0 19 0.05 1 0 1 0 0 0
....................................................................................................................................................TGGTTAGTTGGTTGTTCCTT................................................................................... 20 0 19 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................CGAGGATAGCTCGTTTACCTACGT..................... 24 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................AGACGAGGATAGCTCGTTTCCCT......................... 23 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................CGAGTATAGCTCGTTTCCCTACGTGGCT................. 28 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................GACGAGGATAGCTCGTTTCCCT......................... 22 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................TGTTCCTGGTGCTTACTTGTCACTT.................................................................. 25 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................AGCTCGTTTCCCTACGCGGCTGCGAT............ 26 1 20 0.05 1 0 0 1 0 0
...................................................................................................................CAGACTATTTAGTACGCA...................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0
.........................................................................................................................................................................................................................CGTTTCCCTACGTGGCTGCGATC........... 23 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................................................TGACGAGGATAGCTCGTTTCCCTACGTGGC.................. 30 1 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................................TAGACGAGGATAGCTCGTTTCCCTAC....................... 26 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................TAGACGAGGATAGCTCGTTTCCCT......................... 24 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................GAGGATAGCTCGTTTCCCTACGT..................... 23 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................CGAGGATAGCTCGTTTCCCTACGCGGCT................. 28 1 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................................ACGAGGATAGCTCGTTTCCCTACGTGGCT................. 29 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................................TGCTCGTTTCCCTACGTGGCTGCGAT............ 26 1 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................CTTAGACGAGGATAGCTCGTTTCCCT......................... 26 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................TAGACGATGATAGCTCGTTTCCCTACGT..................... 28 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................TTAGACGAGGATAGCTCGTTTCCCT......................... 25 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................GACGAGGATAGCTCGTTTCCCTACGT..................... 26 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................................TTCCCTACGTGGCTGCGATCT.......... 21 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................AGGGAAACGACTTAGACGAT......................................... 20 2 20 0.05 1 0 0 0 0 1
.....................................................................................................................................................................................................................ATCTCGTTTCCCTACGTGGCTGCGAT............ 26 1 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004934:23496-23746 - dwi_3083 AACTG-CAAA-T-A------------TTAACCACAACAC--------------------AAAACATG---------A-ACATAAATCTATATCTATG---AAAACTTTATTTTAAATCAATTGGAATAAATGCCAGAAGAAAGCAGAAGCAGCGGTTGGA--------A-CCATCTGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACCAATCAACCA-------------------------ACAAGGAACACGAATGAACAGTGAAAATA----TTC--------------------------------------------------------------------C-----------------C-TTTGCAGAATCTGCTCCTA-TCGAGCAAAGGGATGCACCGACGCTAGAAGAAGCGTTA
droVir3 scaffold_12958:1980042-1980295 - AATTT-CAAG-T-GCG----------ATAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACCAAAAAAAAAAAAAAA-----------------------------------------------------------------------------------------------------------TTTAATAAAAATAGAACG-A--ACAAAA----CAAA---------AATCATAAA--------------------------------------------------------------------------ATGAACA------------ACAGCATTTTGTGCGCAAAATCAACTTATAAT-----------ACATGGAACACAGATAATACAGATG-----------------------------------------------------------------GACACACAAGAACAACA--------------------------------------ACACCAACAACA---------ACAACATTC-----------CCAAAAACATGACATA-AC-TTCACAAAAGCTGCTCCCG-TCGAGCAAAGGAACACACCGACGCTGACAAAGGCGCTT
droMoj3 scaffold_6473:2589665-2589842 + AAACAAAA--AC-AAA--------ACTAAA-----AAAC--------------------AAAACATA-AAAAAAGCA-ACATTATATTATGATTACC---AATATTATTATTATGATCATTATGAGAATATGCTGAAAAAATCGTGAAGCAATTGTGTATTGGGGGCAGCCAATCTGAAAAAGAAAG-------------------------------------TAATGAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACCAACCACTCAACCA-------------------------AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:10542712-10542761 + AACCA-AC--CAACCA------------AC---------------------------------------------------------------------------------------------------------------------------------------------------------CAAC-------------------------------------CAATCAAACA----------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACCAACCAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAA
dp5 XL_group1a:2221542-2221706 + AGCA-ATT--GCA-AA--------ACTAAA-----G---------------------------------------------TAAAGCTG---CTGTG---G-AACTCAGTTTCAAAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAAAAACAAAATGATAAACGTTAACTAAAAACGAGC---------------------------CGAATGCAGAGCAGCG-----------------------------------------------------------------AC------------------A-ACACAGCATTCTGCTCCTA-TCGTGCAAAGGTATCCACCCTCTCTTCAGGAGTACCTG
droPer2 scaffold_2268:59-278 - GAATG-GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAAAAAAAAAAAAAAAAAAAAGTGTGTGTGTTATTTTA----------------------------------------------------------------------------------------------AAAAATCGGACC-A--A------------GTCAAAAGAAAATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAACTATTGAAATA--------------------------------------GG----ACCGCCTCTGTGCACCGTCGATGGACAGTAACACAATCCACTCCAGCAGCAGAAAATGC-----------------------ACCAG-ACTTCGCTCGACGCTGCTCCTACTCGAGCAAAGGGACGCACTCAGCTTACAAGAGGCATTA
droAna3 scaffold_13118:116395-116631 + AAACA-AA---C-ATA----------GTTACAAAATGAA--------------------AAAGTATA---------A-ATATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTATATAATGAAATATTTATATATAAATGGCAA---------AAAAAATTATTTCGGAAAAAGGCC-----------------------------------C----------AAAA--AT----------C----------ATC--------------------------------------------------------------------------------------------------------ATCGT--------------------------------------------------------------------------------GAATGAGTCA----------------------------------AAAAATAAGTTCGGAATGCA----ATCCACCCCCTGTGTCACCGATGG-------------------------------ATGA------------------------CCAAGAT-TTCGACAAAGCTACTCCTA-TTGAACAAAGAGACGCACCGACTCTAGAGGAGGCTTTA
droBip1 scf7180000393357:10684-10741 - TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATGGAAATGCTCCTA-TCGAGCCAAGGAACGCACCAACTCTAGAAAAGGCTTTA
droKik1 scf7180000301867:9408-9460 - TGAA-AAA------------TTTGTCGAGA--------------------------------------------------------------------------------------TCAATTGGAAAAACTGGTAGAAGAGAAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG
droFic1 scf7180000453932:49956-50083 + AGGCA-AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGCCGACTACACCA-------------------------ACGCAGGATACAAATGAGTGCGGAAGGCA----ATCCGTTCTCTGCACCCTCGTGGG-----------------------------------------------------------------------AGGCGACTGCACCTA-TCGTGCAAAGGGACGCGCCAACACTACAAGAGACCCTA
droEle1 scf7180000490966:13358-13638 + ACCGG-CG--CCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGCCCAAAAGACCCGGACAAAATTATAATACAAA----------ACCAA----------TACAAAAAAAGAAGGAAGAAAAAG--------------------------------------------------------------------------------------------------------------AAAGAATAGTTG-A--CCAGGA----CATG---------TGTGGAAGG-------------------------------------------------------------------------------------------------------------------------------AATGGCGAATCCTTTTACACAAACGATGGAAATTGAAGTGTGGTAGGCAGACCGCCGACTACACCA-------------------------ACGAAGGAGGCATATGAGTGCGGAAGGCA----GTCCGCCCTCTGAACCGTCGTGGG-----------------------------------------------------------------------AGGTCCCTGCTCGTG-TTGAGCAAAGAGACGCTCCAAGCCTAGAAGAGGCTTTG
droRho1 scf7180000777191:1359-1651 - AACA-AAA--ATA-TA------AGTCTAAACCACAACAACATCATATAAATCGAAAATAAAAACACC---------A-ACAAAAATCTGGAACAACAAACAAAACCTGTGCGAT----GACCGGCACCGGTACCGC---------------------------------------------------CTGAGTCCAGAGGCCCCGGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC----------AGAACGAGAAAATCAACAAG---------TGTGGAAGG-------------------------------------------------------------------------------------------------------------------------------AATGGCAAAT--------------------------------------------CCTTCTACACCA-------------------------ACGCTGGAAATATATGAGTGCGGAAGGCA----ATCCGCCCTTTTCACCCCCGTGGG-----------------------------------------------------------------------AGGCACCTGCTCCTA-TTGAGCAAAGGGACGAACCGAGCCTACAAGAAGCTCTC
droBia1 scf7180000302487:5373-5584 - AAAA-AAA--ACA-AA--------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCAG-------------------------------------------------------------------------------------------------------------------------------------C----------AGAA--CCAGAA----AAAG---------TGTGGAAG--------------------------------------------------------------------------------------------------------------------------------AATGGCAA------TGACGCCAACGCAGGAAAATAAAGTGTGGTAGACAAACCGCTGACTACACCA-------------------------ACGAAGTAGACATATGAATGCGGTAGGTA----ATCCACCCTCTGCATCATCGTGGA-----------------------------------------------------------------------AGGCGCCTGCTCCTG-TCGAGCAAAGGGACGCACCAAGCCTACAAGAGGCCCTA
droTak1 scf7180000411208:22013-22258 + TAGTG-CGAA-T-ATA----------TTTAACACAAAAA--------------------TAAAACCGAATATATATAAACAT----ATATATCTATA---AA---------------------AAAAATGTGCTAAAAAT--TAAAGAA------------------------------------------------------------------------------------------CAAATACCTG-----------------------------------------------------------------------------------------TGGAAGACC-----------------------------------C----------AAAA--AA----------A----------ATTTT------------------------------------GTTTAAACGCCTGTGCG-----------------------------------------------------------------------------------------------------------------------------------------AGGGCTA-------------------------GCGCCGGCAACGCCCGAGTCCAAAGGGCA-----CGTATGAGTTA-----------------------------------------------------------------------CGTTACT-CTGGATAATGCTGCTCCTG-TCGAGCAAAGGGACGCACCGAGCTTGCAAGAAGCTCTA
droEug1 scf7180000408750:4170-4293 - AAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCGACTGAACCA-------------------------ACGAAGGAGACCTTTGAATGCGGAAGGCA----ATTCGCCGTCTGCAACATCGTGGG-----------------------------------------------------------------------AGGAATCTGCTCCTG-TCGAGTAAAAGGATGCACCAAGCCTACAGGAAGCCTTA
dm3 chrU:9071823-9072136 + ATAA-ATA------------AAGGTATAGCACAT--------------------------------------------------------------------------------------ATTAAGTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTATATACAAATAAAACACCGCCCCCATGGGACTTTTTGAAAGAAAACCTCCAGCAAAGAAAGCCGAATACCACAACTCACTCAGC----------AAAA--ATAGAAATAATCAA---------TGAAGAAATAACTGAAAATTCACCATCTCCCAAGCCGAAAAGACCCGACGTCTGCCCGACCGACTGACCTC------------------------------------------------------------------------------------------------------------------------------GACCA-------------------------TTGTACGCCGCACATGACAACA--------------------------------------------------------------GCGAATGTCTACAAAGCAGAC-----------------G-TTCGAACACCCTGCTCCTG-TCGAGCAAAGGGATCTGCCAAGTCTCAAAGAGGTAATA
droSim2 node_13148:669-719 - G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTGCTCCTA-TCGAGCAAAGGGACGCACCTACTCTACAAGAGGCACTA
droSec2 scaffold_1784:3544-3813 + AGACG-GG--ACACTGATGGAAAAAA---------------------------------GAAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------AAAATACTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAAAAGACCCGACGTCTGCCCGAACGACTGCCCTCAACCATTGTACGCC--GCAACAGCAATTAGCACGGCATCCTGCGAGGATAGGAAAAATATAAAGGATTAG--------------------------------------------------------------GATAAAGGATAAAGGATTCCACCGGCGCGCTGC--ACATGACAACA--------------------------------------------------------------GCGAATGTCTACAAAGCCGAC-----------------G-TTCGAACACCCTGCTCCTG-TCGAGCAAAGGGATCTGCCAAGTCTCGAAGAGGTAATA
droYak3 v2_chrUn_2262:3106-3183 + ATAAA-CAAG-A-AAA----------GCAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-CTGGAGGATACTACACCTG-TCGTACAAAGGGATCCACCAAGCCTACAAGAGGCTTTA
droEre2 scaffold_4763:60549-60692 + CTAA-TTA------------AACAACTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------TAAA-------------------------------------TAACAAA---ACGGC----------TAAAAATAAAAAAAAAAAAAAACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAATAAT---------------------------TGATGGCAGTGGAGCC-----------------------------------------------------------------ACA-----------------A-TTCTCAACGGCTGTGCCCA-CCAAACAGAGGGACTTGCCGACGCTGAAAGAGTCCTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AACTG-CAAA-T-A------------TTAACCACAACAC--------------------AAAACATG---------A-ACATAAATCTATATCTATG---AAAACTTTATTTTAAATCAATTGGAATAAATGCCAGAAGAAAGCAGAAGCAGCGGTTGGA--------A-CCATCTGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACCAATCAACCA-------------------------ACAAGGAACACGAATGAACAGTGAAAATA----TTC--------------------------------------------------------------------C-----------------C-TTTGCAGAATCTGCTCCTA-TCGAGCAAAGGGATGCACCGACGCTAGAAGAAGCGTTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................GATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................2370.71501040
.............................................................................................................................................AGCAGAAGCAGCGGTTGGA--------A-CCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000
.........................................................................................................................................................GGTTGGA--------A-CCATCTGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25100010
.....................................................................................................................................................................................ATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACC........................................................................................................................................................................................................................2760.17100100
............................................................................................................................................................................ATCTGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100010
............................................................................................................................................................................ATCTGATAAATCAAG-------------------------------------CGAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14110000
....................................................................................................................................................................................AATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..................................................................................................................................................................................................................................1870.14100010
...................................................................................................................................................................................AAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA...............................................................................................................................................................................................................................2270.14100010
...................................................................................................................................................................................AAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.14100010
..............................................................................................................................................................................CTGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................2570.14100100
................................................................................................................................................................................GATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA................................................................................................................................................................................................................................2470.14100010
................................................................................................................................................................................GATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14101000
...................................................................................................................................................................................AAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................2070.14100010
............................................................................................................................................................................ATCTGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA................................................................................................................................................................................................................................2870.14110000
.............................................................................................................................................................................TCTGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................2670.14101000
................................................................................................................................................................................GATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACC............................................................................................................................................................................................................................2870.14100010
...........................................................................................................................................................................CATCTGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
.....................................................................................................................................................................................ATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAC.............................................................................................................................................................................................................................2270.14100010
..............................................................................................................................................................GA--------A-CCATCTGATAAATCAAG-------------------------------------CGAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14100100
.............................................................................................................................................................GGA--------A-CCATCTGATAAATCAAG-------------------------------------CGAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14100100
........................................................................................................................................................................................AAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACC........................................................................................................................................................................................................................2470.14101000
.............................................................................................................................................................................TCTGATAAATCAAG-------------------------------------CGAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.14101000
..............................................................................................................................................................GA--------A-CCATCTGATAAATCAAG-------------------------------------CGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.14100100
.................................................................................................................................................................................ATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................2270.14100010
..............................................................................................................................................................GA--------A-CCATCTGATAAATCAAG-------------------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14100010
...........................................................................................................................................................................CATCTGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................2870.14101000
................................................................................................................................................................................GATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA...............................................................................................................................................................................................................................2570.14100010
.............................................................................................................................................................................TCTGATAAATCAAG-------------------------------------CGAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.14110000
.................................................................................................................................................................................ATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.14100010
...............................................................................................................................................................A--------A-CCATCTGATAAATCAAG-------------------------------------CGAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100010
................................................................................................................................................................................GATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA..............................................................................................................................................................................................................................2670.14100010
..................................................................................................................................................................................TAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.................................................................................................................................................................................................................................2170.14100010
................................................................................................................................................................................GATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..................................................................................................................................................................................................................................2270.14100010
..............................................................................................................................................................GA--------A-CCATCTGATAAATCAAG-------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.14101000
...............................................................................................................................................................................TGATAAATCAAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.14101000
........................................................................................................................................................................................AAG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACC............................................................................................................................................................................................................................2080.13100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-------------------------ACAAGGAACACGAATGAACA..................................................................................................................................................................23180.11202000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGATGCACCGACGCTAGAAGAAG.....25120.08101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGATGCACCGACGCTAGAAGA.......25120.08100010
.........................................................................................................................................................................................AG-------------------------------------CGAACCAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACC............................................................................................................................................................................................................................19140.07100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGGAACACGAATGAACAGTGA..............................................................................................................................................................24180.06101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-------------------------ACAAGGAACACGAATGAACAG.................................................................................................................................................................24180.06101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCA-------------------------ACAAGGAACACGAAT.......................................................................................................................................................................18180.06101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAACCA-------------------------ACAAGGAACACGA.........................................................................................................................................................................23190.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTCCTA-TCGAGCAAAGGGATGCA.....................27200.05101000
droVir3
AATTT-CAAG-T-GCG----------ATAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACCAAAAAAAAAAAAAAA-----------------------------------------------------------------------------------------------------------TTTAATAAAAATAGAACG-A--ACAAAA----CAAA---------AATCATAAA--------------------------------------------------------------------------ATGAACA------------ACAGCATTTTGTGCGCAAAATCAACTTATAAT-----------ACATGGAACACAGATAATACAGATG-----------------------------------------------------------------GACACACAAGAACAACA--------------------------------------ACACCAACAACA---------ACAACATTC-----------CCAAAAACATGACATA-AC-TTCACAAAAGCTGCTCCCG-TCGAGCAAAGGAACACACCGACGCTGACAAAGGCGCTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--------------------------------------ACACCAACAACA---------ACAACA............................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
AAACAAAA--AC-AAA--------ACTAAA-----AAAC--------------------AAAACATA-AAAAAAGCA-ACATTATATTATGATTACC---AATATTATTATTATGATCATTATGAGAATATGCTGAAAAAATCGTGAAGCAATTGTGTATTGGGGGCAGCCAATCTGAAAAAGAAAG-------------------------------------TAATGAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAACCAACCACTCAACCA-------------------------AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................GAAGCAATTGTGTATTGGGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................GCAATTGTGTATTGGGGGCAGCCAATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
............................................................................................................................................ATCGTGAAGCAATTGTGTATTGGGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................................................TGTGTATTGGGGGCAGCCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
droGri2
AACCA-AC--CAACCA------------AC---------------------------------------------------------------------------------------------------------------------------------------------------------CAAC-------------------------------------CAATCAAACA----------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACCAACCAATCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
AGCA-ATT--GCA-AA--------ACTAAA-----G---------------------------------------------TAAAGCTG---CTGTG---G-AACTCAGTTTCAAAACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAAAAACAAAATGATAAACGTTAACTAAAAACGAGC---------------------------CGAATGCAGAGCAGCG-----------------------------------------------------------------AC------------------A-ACACAGCATTCTGCTCCTA-TCGTGCAAAGGTATCCACCCTCTCTTCAGGAGTACCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GAATG-GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAAAAAAAAAAAAAAAAAAAAGTGTGTGTGTTATTTTA----------------------------------------------------------------------------------------------AAAAATCGGACC-A--A------------GTCAAAAGAAAATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAACTATTGAAATA--------------------------------------GG----ACCGCCTCTGTGCACCGTCGATGGACAGTAACACAATCCACTCCAGCAGCAGAAAATGC-----------------------ACCAG-ACTTCGCTCGACGCTGCTCCTACTCGAGCAAAGGGACGCACTCAGCTTACAAGAGGCATTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
droAna3
AAACA-AA---C-ATA----------GTTACAAAATGAA--------------------AAAGTATA---------A-ATATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTATATAATGAAATATTTATATATAAATGGCAA---------AAAAAATTATTTCGGAAAAAGGCC-----------------------------------C----------AAAA--AT----------C----------ATC--------------------------------------------------------------------------------------------------------ATCGT--------------------------------------------------------------------------------GAATGAGTCA----------------------------------AAAAATAAGTTCGGAATGCA----ATCCACCCCCTGTGTCACCGATGG-------------------------------ATGA------------------------CCAAGAT-TTCGACAAAGCTACTCCTA-TTGAACAAAGAGACGCACCGACTCTAGAGGAGGCTTTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCATGGAAATGCTCCTA-TCGAGCCAAGGAACGCACCAACTCTAGAAAAGGCTTTASizeHit CountTotal NormTotal
No Reads
droKik1
TGAA-AAA------------TTTGTCGAGA--------------------------------------------------------------------------------------TCAATTGGAAAAACTGGTAGAAGAGAAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGSizeHit CountTotal NormTotal
No Reads
droFic1
AGGCA-AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGCCGACTACACCA-------------------------ACGCAGGATACAAATGAGTGCGGAAGGCA----ATCCGTTCTCTGCACCCTCGTGGG-----------------------------------------------------------------------AGGCGACTGCACCTA-TCGTGCAAAGGGACGCGCCAACACTACAAGAGACCCTASizeHit CountTotal NormTotal
No Reads
droEle1
ACCGG-CG--CCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGCCCAAAAGACCCGGACAAAATTATAATACAAA----------ACCAA----------TACAAAAAAAGAAGGAAGAAAAAG--------------------------------------------------------------------------------------------------------------AAAGAATAGTTG-A--CCAGGA----CATG---------TGTGGAAGG-------------------------------------------------------------------------------------------------------------------------------AATGGCGAATCCTTTTACACAAACGATGGAAATTGAAGTGTGGTAGGCAGACCGCCGACTACACCA-------------------------ACGAAGGAGGCATATGAGTGCGGAAGGCA----GTCCGCCCTCTGAACCGTCGTGGG-----------------------------------------------------------------------AGGTCCCTGCTCGTG-TTGAGCAAAGAGACGCTCCAAGCCTAGAAGAGGCTTTGSizeHit CountTotal NormTotal
No Reads
droRho1
AACA-AAA--ATA-TA------AGTCTAAACCACAACAACATCATATAAATCGAAAATAAAAACACC---------A-ACAAAAATCTGGAACAACAAACAAAACCTGTGCGAT----GACCGGCACCGGTACCGC---------------------------------------------------CTGAGTCCAGAGGCCCCGGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC----------AGAACGAGAAAATCAACAAG---------TGTGGAAGG-------------------------------------------------------------------------------------------------------------------------------AATGGCAAAT--------------------------------------------CCTTCTACACCA-------------------------ACGCTGGAAATATATGAGTGCGGAAGGCA----ATCCGCCCTTTTCACCCCCGTGGG-----------------------------------------------------------------------AGGCACCTGCTCCTA-TTGAGCAAAGGGACGAACCGAGCCTACAAGAAGCTCTCSizeHit CountTotal NormTotal
No Reads
droBia1
AAAA-AAA--ACA-AA--------A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCAG-------------------------------------------------------------------------------------------------------------------------------------C----------AGAA--CCAGAA----AAAG---------TGTGGAAG--------------------------------------------------------------------------------------------------------------------------------AATGGCAA------TGACGCCAACGCAGGAAAATAAAGTGTGGTAGACAAACCGCTGACTACACCA-------------------------ACGAAGTAGACATATGAATGCGGTAGGTA----ATCCACCCTCTGCATCATCGTGGA-----------------------------------------------------------------------AGGCGCCTGCTCCTG-TCGAGCAAAGGGACGCACCAAGCCTACAAGAGGCCCTASizeHit CountTotal NormTotal
No Reads
droTak1
TAGTG-CGAA-T-ATA----------TTTAACACAAAAA--------------------TAAAACCGAATATATATAAACAT----ATATATCTATA---AA---------------------AAAAATGTGCTAAAAAT--TAAAGAA------------------------------------------------------------------------------------------CAAATACCTG-----------------------------------------------------------------------------------------TGGAAGACC-----------------------------------C----------AAAA--AA----------A----------ATTTT------------------------------------GTTTAAACGCCTGTGCG-----------------------------------------------------------------------------------------------------------------------------------------AGGGCTA-------------------------GCGCCGGCAACGCCCGAGTCCAAAGGGCA-----CGTATGAGTTA-----------------------------------------------------------------------CGTTACT-CTGGATAATGCTGCTCCTG-TCGAGCAAAGGGACGCACCGAGCTTGCAAGAAGCTCTASizeHit CountTotal NormTotal
No Reads
droEug1
AAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCGACTGAACCA-------------------------ACGAAGGAGACCTTTGAATGCGGAAGGCA----ATTCGCCGTCTGCAACATCGTGGG-----------------------------------------------------------------------AGGAATCTGCTCCTG-TCGAGTAAAAGGATGCACCAAGCCTACAGGAAGCCTTASizeHit CountTotal NormTotal
No Reads
dm3
ATAA-ATA------------AAGGTATAGCACAT--------------------------------------------------------------------------------------ATTAAGTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTATTATATACAAATAAAACACCGCCCCCATGGGACTTTTTGAAAGAAAACCTCCAGCAAAGAAAGCCGAATACCACAACTCACTCAGC----------AAAA--ATAGAAATAATCAA---------TGAAGAAATAACTGAAAATTCACCATCTCCCAAGCCGAAAAGACCCGACGTCTGCCCGACCGACTGACCTC------------------------------------------------------------------------------------------------------------------------------GACCA-------------------------TTGTACGCCGCACATGACAACA--------------------------------------------------------------GCGAATGTCTACAAAGCAGAC-----------------G-TTCGAACACCCTGCTCCTG-TCGAGCAAAGGGATCTGCCAAGTCTCAAAGAGGTAATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-TCGAGCAAAGGGATCTGC....................2120227.85455700000000000000000161000000014000000000010001128000000010007000000000000000000000100000000012100000000000000011188515000020000000000000000010000008000000009110100000000950008960100000003000000971830170000000000000002000000000252322200008020701015884510469900000028012230690024090200000304019200111200036400100000139143131001000000201000003101172610930129621100403751800101121114021410
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...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-----------------G-TTCGAACACCCTGCTCC.........................................212014.152830000000000000000000002000000000000000000001001000000000000000000000000000000000000000002200000010000000048063400001000000000000000000000000000000000000000100000000001100000000000000000001000000000000000000000000000000007070122117094190000001008000001000200011200000013000010000000000000000000001001020100360000300000007000000010000120
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAAAGGGATCTGCCAAG................212012.7525500000000000000000000000000600000000000000000000000000000000000000000000000000000000000032000000001000000138974400001200000000000000000000000000000000020000000010100250000000000000000002121300000000000000000200000005100000000101013121900000002000004001010200001000000000001010000000068000000000000000009000200011021002040010010000310300
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAAGCCGAAAAGACCCGACGTC.....................................................................................................................................................................................................................................................................................................................................................................251011.901190000000010000000000001000000000000001010000000001000000000000000000000000000000000000010000000003000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000003300000000001512014627000300200000010000000000000000000000000000000000000000000000000000000000002000000114000000240000000000000003204000006
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TCGAGCAAAGGGATCTGCCAAG................242010.5521100000000000000000000000000000000000000010020010001120000000000000000000000000000000002000000000010000000000000000000000000000000000000020000110401010000000000000000000000000000000000000000000001001000000100300571600080211111831113200221000000000000000000000000000000000000000000000000000000000000024240000001041000000000000005201000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTG-TCGAGCAAAGGGATCTGCC...................242010.55211000000020000000000000000000000000000100100200300010010000000000000000000000000000010402000000000000000000000000000000000000000000010104020030010000011000400000000000000000000000000000000001010600000010000100040000010020222172201616100010000000000000000000000000000000000000000000000010000000200000610840000001040000000000000000330000010
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TCGAGCAAAGGGATCTGCCA..................21209.35187000000000000000000000000002000000000000000010000000000000000000000000000000000000000000010000000000000009101281200000000000000000000000000000000000000100000000000000200000000000000000006010000000000000000000000000320010000000000110200000010060050030001000140041000100001000000000007000000000000000300000010010030000034010000001120030
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TCGAGCAAAGGGATCTGC....................20209.35187000000000000000000000000000000000000021000011001304123000000000000000000000000000000100000000000001000000000000000000000000000000000000100000000000100000040000000000100000000000000000000020000000000000000020000008001300003300000215211000000000100100100001100031300003000300100000134400000020005100150000001000601000112000000010100300
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...............................................................................................................................................................................................................................................................................................................................................................CAAAGAAAGCCGAATACCACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21208.70174000000000000000000000000000000000000000000020001000100000000000000000000000000000000001060000000000000001508002000000000000000000000000000000000000002000000000105003000000000010000002624000000000000000000000000000000000000010000065100000020000000000000000000000000000000000000001613000000000000100000006000030070000130010000011500210
..................................................................................................................................................................................................................................................................................................................AATAAAACACCGCCCCCATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21208.651730000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000002091000000100000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000100000000030001548326000000000000000000000000000000000000000000000000100000000000000000000600000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTG-TCGAGCAAAGGGATCTGCCA..................25208.5017000000000000000000000020000000000000000001100101000002100010000000000000000000000001000300000000000000000000000000004000000000000000010000000211003512201104000000030000000000000000000000000000400000000000040000000008011170000191810000000000000000000000000000000000000000000000000000000000050000036000000011245000100002000002533000000
............................................................................................................................................................................................................................................................................................................................................................................................................................A---------TGAAGAAATAACTGAAAATT.....................................................................................................................................................................................................................................................................................................................................................................................................21208.4516900000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001100006000100000000000000010000000000000000000000000100000022053000210018100000040000000010000010000020000400010000000000760000000000000000000090000000200001000000000100190
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTG-TCGAGCAAAGGGATC.......................21208.101620000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000001000400000000000000000000000000000000000000000000000010010925390000000000000000000000000000000000000000000000103000004000107132020000004003004000000000001002100018000210000000000600000000001000000200000200000000121000000000110030
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAATAACTGAAAATTCACCATC..............................................................................................................................................................................................................................................................................................................................................................................................26107.9079000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302031910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAACACCCTGCTCCTG-TCG...................................22207.80156000000000000000000000000000000000000000000011010000190000000000000000000000000000000000000000000000000000002040000000000000000000000000000000000000001000000000005001030000000000000000030000000000000000000000000000020190013011060230220000000100000000000100000001000000000010000000200000000010000000000000011001645003016000000000000110
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------G-TTCGAACACCCTGCTCCTG-TCGA..................................25207.5515100000000000000000000000000000000000000002100010040002100000000000000000000000000000000000000000000000000000000000000000000000000000000000010036000636400000000000000000000000000000000000000101000022000000017000060000170170030221300000000000000000000000000000000000000000000000000000000000000000006010000005510000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------G-TTCGAACACCCTGCTCCTG-......................................21207.50150000010000000000000000000000000000000000011001100100000100000000000000000000000000000000430000000000000003157100000000000000000000000000000000000000010000000006040004000000000000000005500001010000000000000200000006010000000011110010000002005006002000300002200000013000010000000025400000000001000000100000002000000090000000000004140
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAAAGGGATCTGCCAAGT...............21206.951390000000000000000000000000020000000000100000000000000000000000000000000000000000000000000000000000000000078070100001000000000000000000000000000000000000000000000700300000000000000000150001000000000000000000000000024301000000000003300000000000000001000000021003100060001000000000000000000000010100100002400100109000013000000000020020
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCTG-TCGAGCAAAGGGAT........................21206.65133000000000000000000000000000000000000000000000000000000050000000000000000000000000000000200000000000000006040000000000000000000000000000000000000000000000000000005011010000000000000010100400000000000000000000010000020000000000001500000000300000200000020001000100007000100000000020110000000000300000000021002000012000012000000000010120
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGACAACA--------------------------------------------------------------GCGAATGTC.........................................................................................21206.45129000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000005130000000000000000000000200000000000000000000000000030001000000000024710000003004000001000000020100000000002100070013036000000000080030201001701002005000010010000000200560
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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACACCCTGCTCCTG-TCGA..................................21206.251250000000000000000010000000020000000000000000000000000000000000000000000000000000000000000000000010000000080100000000200000000000000000000000000000000001000000000000030000001000000000061706000000000000000000000000000000000000000016500000004001002001000000011000000010000000000000030000000000000000000000000011016000025001000200000130
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................................................................................................................................................................................................................................................................................................................................................................................................................TAGAAATAATCAA---------TGAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................20201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001610000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAAGCCGAAAAGACCCGAC........................................................................................................................................................................................................................................................................................................................................................................21201.05210000000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000003210000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000010000000000030000012010000000000000000000000000000200000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGACCTC------------------------------------------------------------------------------------------------------------------------------GACCA-------------------------TTGTACGCCGC...........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTCTCAAAGAGGTAAT.2181.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110500010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CACCGCCCCCATGGGACTTTTTGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGACCGACTGACCT...................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CCCATGGGACTTTTTGAAAGAAAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCGACCGACTGACCTC------------------------------------------------------------------------------------------------------------------------------GA..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AA---------TGAAGAAATAACTGAAAATT.....................................................................................................................................................................................................................................................................................................................................................................................................22201.00200000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000480013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TACAAATAAAACACCGCCCCCATGGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCAGAC-----------------G-TTCGAACACCCT..............................................2291.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000050000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CCGAATACCACAACTCACTCAGC----------AAAA--AT..............................................................................................................................................................................................................................................................................................................................................................................................................................................29201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030110105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGACCTC------------------------------------------------------------------------------------------------------------------------------GACCA-------------------------TTGTACGCCG............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCCGACCGACTGACC....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCAAGCCGAAAAGACCCGACGT......................................................................................................................................................................................................................................................................................................................................................................26101.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000000000105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTGCTCCTA-TCGAGCAAAGGGACGCACCTACTCTACAAGAGGCACTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTA-TCGAGCAAAGGGACGCACCTAC................27119.0019000000000000163000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TCGAGCAAAGGGACGCACCTAC................2414.00400000000000040000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTA-TCGAGCAAAGGGACGCACCTA.................2613.00300000000000030000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TCGAGCAAAGGGACGC......................1813.00300000000003000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TCGAGCAAAGGGACGCACCTACT...............2512.00200000011000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAAAGGGACGCACCTACTCTACA..........2812.00200000000000020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TCGAGCAAAGGGACGCACAA..................2212.00200000000000020000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAAAGGGACGCACCTACTCTACA..........2711.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTA-TCGAGCAAAGGGACGCAC....................2311.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTA-TCGAGCAAAGGGACGCACC...................2411.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACGCACCTACTCTA............1811.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGACGCACCTACTCTACAAGAGGC....2811.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTA-TCGAGCAAAGGGACGCACCTACTC..............2911.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTA-TCGAGCAAAGGGACGCACCTACA...............2811.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACGCACCTACTCTACAAGAGGCA...2711.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACGCACCTACTCTACAAGAGGCAC..2811.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTA-TCGAGCAAAGGGACGCACCTAC................2611.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAAAGGGACGCACCTACTCT.............2511.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTA-TCGAGCAAAGGGACGCAC....................2611.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACGCACCTACTCTACAAGAGGCACC.2911.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGACGCACCTAC................1511.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTA-TCGAGCAAAGGGA.........................2111.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGACGCACCTACTCTACAAGA.......2511.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGACGCACCTACTCTACAAGAGGC....2611.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-TCGAGCAAAGGGA.........................1520.50100000000001000000
droSec2
AGACG-GG--ACACTGATGGAAAAAA---------------------------------GAAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------AAAATACTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAAAAGACCCGACGTCTGCCCGAACGACTGCCCTCAACCATTGTACGCC--GCAACAGCAATTAGCACGGCATCCTGCGAGGATAGGAAAAATATAAAGGATTAG--------------------------------------------------------------GATAAAGGATAAAGGATTCCACCGGCGCGCTGC--ACATGACAACA--------------------------------------------------------------GCGAATGTCTACAAAGCCGAC-----------------G-TTCGAACACCCTGCTCCTG-TCGAGCAAAGGGATCTGCCAAGTCTCGAAGAGGTAATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCTACAAAGCCGAC-----------------G-TTCGAAC...................................................26200.3577000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCTACAAAGCCGAC-----------------G-TTCGAA....................................................25200.2554010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAG--------------------------------------------------------------GATAAAGGATAAAGGATTCCAC........................................................................................................................................................................................26120.1722000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCTACAAAGCCGAC-----------------G-TTC.......................................................22200.1532010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATAGGAAAAATATAAAGGATT..............................................................................................................................................................................................................................................................................25190.1122000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG-TCGAGCAAAGGGATCTGC....................21200.1021100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTACAAAGCCGAC-----------------G-TTCGA.....................................................23200.1022000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCTACAAAGCCGAC-----------------G-TTCG......................................................23200.1022000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------------------------GATAAAGGATAAAGGATTCCACCGGC....................................................................................................................................................................................27120.0811000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAG--------------------------------------------------------------GATAAAGGATAAAGGATTCCACC.......................................................................................................................................................................................27120.0811000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGGATAAAGGATTCCACCGGCGC..................................................................................................................................................................................27130.0810100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATAAAGGATTCCACCGGCGCGC................................................................................................................................................................................24140.0711000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGACGTCTGCCCGAACGACTGC......................................................................................................................................................................................................................................................................................................................................................24170.0610010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCGAC-----------------G-TTCGAACACCCTGCTCC.........................................26180.0611000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGTCTGCCCGAACGACTGCCCT...................................................................................................................................................................................................................................................................................................................................................25180.0611000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGTCTGCCCGAACGACTGCCCTC..................................................................................................................................................................................................................................................................................................................................................25180.0611000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGCC--GCAACAGCAATTAGCACGGCA.............................................................................................................................................................................................................................................................................................................27190.0511000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATAGGAAAAATATAAAGGATTA.............................................................................................................................................................................................................................................................................26190.0511000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--------------------------------------------------------------GCGAATGTCTACAAAGCCGAC-----------------G-TT........................................................27190.0510001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTACAAAGCCGAC-----------------G-TT........................................................20200.0511000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCCTG-TCGAGCAAAGGGATCTG.....................25200.0510010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTACAAAGCCGAC-----------------G-TTCGAACAC.................................................26200.0511000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAATTAGCACGGCATCCTG........................................................................................................................................................................................................................................................................................................23200.0511000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAAAGGGATCTGCCAA.................21200.0510010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTG-TCGAGCAAAGGGATCTGCCAA.................26200.0511000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTG-TCGAGCAAAGGGATCTGC....................23200.0511000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAATTAGCACGGCATCCTGC.......................................................................................................................................................................................................................................................................................................27200.0511000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGCCGAC-----------------G-TTCGAACACCCTGC............................................26200.0511000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCTACAAAGCCGAC-----------------G-TTCGG.....................................................24200.0511000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTG-TCGAGCAAAGGGATCTGCCA..................25200.0511000
droYak3
ATAAA-CAAG-A-AAA----------GCAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA-CTGGAGGATACTACACCTG-TCGTACAAAGGGATCCACCAAGCCTACAAGAGGCTTTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CTAA-TTA------------AACAACTAAA---------------------------------------------------------------------------------------------------------------------------------------------------------TAAA-------------------------------------TAACAAA---ACGGC----------TAAAAATAAAAAAAAAAAAAAACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAATAAT---------------------------TGATGGCAGTGGAGCC-----------------------------------------------------------------ACA-----------------A-TTCTCAACGGCTGTGCCCA-CCAAACAGAGGGACTTGCCGACGCTGAAAGAGTCCTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 06:10 AM