ID:

dwi_3056

 Coordinate:

scf2_1100000004929:17325-17475 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.1 -7.0 -6.44

Flybase annnotation

CDS [Dwil\GK12692-cds]; exon [dwil_GLEANR_12994:3]; intron [Dwil\GK12692-in]

No Repeatable elements found

mature
  1. scf2_1100000006239:1211-1237 +
  2. scf2_1100000004519:52998-53024 +
  3. scf2_1100000002212:536-562 +
  4. scf2_1100000009107:663-689 +
  5. dwi_356  scf2_1100000004397:6286-6312 -
  6. scf2_1100000009550:487-513 +
  7. scf2_1100000004585:3058077-3058103 -
  8. scf2_1100000004785:24646-24672 +
  9. scf2_1100000014895:1025-1051 -
  10. scf2_1100000004888:24628-24654 -
  11. dwi_3127  scf2_1100000004943:89868-89894 -
  12. scf2_1100000004943:151666-151692 +
  13. dwi_3056  scf2_1100000004929:17379-17405 -
  14. scf2_1100000004931:49147-49173 +
  15. scf2_1100000004961:2040334-2040360 +
  16. scf2_1100000004967:864415-864441 +
  17. scf2_1100000004968:3083817-3083843 +
star
  1. scf2_1100000004519:52931-52951 +
  2. scf2_1100000004389:37408-37428 -
  3. scf2_1100000004585:3058150-3058170 -
  4. dwi_3056  scf2_1100000004929:17453-17473 -
  5. scf2_1100000004953:56719-56739 -
  6. dwi_3638  scf2_1100000004953:135301-135321 +
  7. scf2_1100000004959:116719-116739 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGGACCACTTGTTGGTGGGTGCGCCGGCCCAACGTCCCCCTCCCTTCTAAAGAGGGGCTCTTCGCACCGATGCTAAGCAAAAAAATTAACTAAAACATTGTATCTTACTTTTAATCATAGCACTTTTGTAAACCGCACTCATAGGGCCTAGTTAGTACACTCAGAATTCAGGGTAGTTTTAACACACTTTATATTTCACAGCAGTATGTCACAGCAAGGAGAAGACGACGGCGATCGCGAGGCCGACATAG
****************************************************.(((((..((.(((....(((((..........................................)))))....))).))..)).))).......******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V118
embryo
 V117
male body
..........GTTGGTTAGAGCGCCGGCCC............................................................................................................................................................................................................................. 20 3 2 1.00 2 0 2 0 0
...................................................................................................GCATCTGACTTTTAATCA...................................................................................................................................... 18 2 19 0.63 12 12 0 0 0
...................................................................................................GCATCTGACTTTTAATCAGAG................................................................................................................................... 21 3 7 0.57 4 4 0 0 0
..........GTTGGTTAGAGCGCCGGCC.............................................................................................................................................................................................................................. 19 3 20 0.55 11 5 2 0 4
...................................................................................................GCATCTGACTTTTAATCATAG................................................................................................................................... 21 2 3 0.33 1 1 0 0 0
........................................................................................................................CACTTTTGTAAACCGCACTCATAGGGC........................................................................................................ 27 0 17 0.29 5 3 0 2 0
........................................................................................................................CACTTTTGTAAACCGCACTCATAGGG......................................................................................................... 26 0 18 0.22 4 4 0 0 0
.....................................................................................................ATCTGACTTTTAATCAGAG................................................................................................................................... 19 2 9 0.22 2 2 0 0 0
.........................................................................................................................ACTTTTGTAAACCGCACTCATAGGGCC....................................................................................................... 27 0 19 0.21 4 4 0 0 0
..............................................................................................................................................................................................................................AGACGACGGCGATCGCGAGGCCGACT... 26 1 6 0.17 1 0 0 1 0
..............................................................................................................................................................................................................................AGACGACGGCGATCGCGAGGCCGT..... 24 1 6 0.17 1 0 0 1 0
.............................................................................................................................................................................................................................AAGACGACGGCGATCGCGAGGCCGT..... 25 1 6 0.17 1 0 0 1 0
..........................................................................................................................................................................................................................GAGAAGACGACGGCGATCGCGAGG......... 24 0 7 0.14 1 1 0 0 0
....................................................AGGGGCTCTTCGCACCGATGC.................................................................................................................................................................................. 21 0 7 0.14 1 1 0 0 0
....................................................AGGGGCTCTTCGCACCGATG................................................................................................................................................................................... 20 0 7 0.14 1 1 0 0 0
....................................................................................................................................................................................................................AGCAAGGAGAAGACGACGGCGA................. 22 0 8 0.13 1 1 0 0 0
.........................................................................................................................................................................................................CAGTATGTCACAGCAAGGAGAAG........................... 23 0 16 0.13 2 1 0 0 1
........................................................................................................................CACTTTTGTAAACCGCACTCATAGGGCC....................................................................................................... 28 0 17 0.12 2 2 0 0 0
.........................................................................................................................ACTTTTGTAAACCGCACTCATAGGGC........................................................................................................ 26 0 19 0.11 2 2 0 0 0
........................................................................................................................CACTTTTGTAAACCGCACTCATAGG.......................................................................................................... 25 0 20 0.10 2 2 0 0 0
.........................................................................................................................ACTTTTGTAAACCGCACTCATAGGG......................................................................................................... 25 0 20 0.10 2 1 0 1 0
........................................................................................................................CACTTTTGTAAACCGCACTCATAG........................................................................................................... 24 0 20 0.10 2 2 0 0 0
...........................................................................................................................TTTTGTAAACCGCACTCATAGG.......................................................................................................... 22 0 20 0.10 2 2 0 0 0
.............................................................................................................TTTAATCATAGCACTTTTGTAAACCGCAC................................................................................................................. 29 0 20 0.10 2 2 0 0 0
........................................................................................................................CACTTTTGTAAACCGCACTCATA............................................................................................................ 23 0 20 0.10 2 2 0 0 0
......................................................GGGCTCTTCGCACCGATGCTA................................................................................................................................................................................ 21 0 10 0.10 1 1 0 0 0
...........................................CTTCTAAAGAGGGGCTCTTCGCAC........................................................................................................................................................................................ 24 0 12 0.08 1 1 0 0 0
.........................................................................................................................................................................................................CAGTATGTCACAGCAAGGAGAAGA.......................... 24 0 16 0.06 1 1 0 0 0
..........................................CCTTCTAAAGAGGGGTTCTTCGC.......................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0
..........................................................................................................................CTTTTGTAAACCGCACTCATAGGGCCT...................................................................................................... 27 0 17 0.06 1 1 0 0 0
................................................................................................................................................................TCAGAATTCAGGGTAGTTTTAACA................................................................... 24 0 18 0.06 1 1 0 0 0
..........................................................................................................................CTTTTGTAAACCGCACTCATAGGGCC....................................................................................................... 26 0 19 0.05 1 1 0 0 0
............................................................................................................................................................................................................TATGTCAAAGCTAGGATAAGA.......................... 21 3 19 0.05 1 0 0 0 1
..............................................................................................................................................................................................ATATTTCACAGCAGTATGTC......................................... 20 0 20 0.05 1 1 0 0 0
..........................................................................................TGAAACATTGTGTCTTAC............................................................................................................................................... 18 2 20 0.05 1 0 0 1 0
..........................................................................................................................CTTTTGTAAACCGCACTCATAGGG......................................................................................................... 24 0 20 0.05 1 1 0 0 0
..........................................................................................................................CTTTTGTAAACCGCACTCA.............................................................................................................. 19 0 20 0.05 1 1 0 0 0
..........................................................................................................................CTTTTGTAAACCGCACTCATA............................................................................................................ 21 0 20 0.05 1 1 0 0 0
..............................................................................................................TTAATCATAGCACTTTTGTAAA....................................................................................................................... 22 0 20 0.05 1 1 0 0 0
...............................................................................................................TAATCATAGCACTTTTGTAAACCG.................................................................................................................... 24 0 20 0.05 1 1 0 0 0
.............................................................................................................................TTGTAAACCGCACTCATAGGGCCT...................................................................................................... 24 0 20 0.05 1 1 0 0 0
................................................................................................................AATCATAGCACTTTTGTAAACCGC................................................................................................................... 24 0 20 0.05 1 1 0 0 0
........................................................................................................................CACTTTTGTAAACCGCACTCACA............................................................................................................ 23 1 20 0.05 1 1 0 0 0
.........................................................................................................................ACTTTTGTAAACCGCACTCATAG........................................................................................................... 23 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

CCCTGGTGAACAACCACCCACGCGGCCGGGTTGCAGGGGGAGGGAAGATTTCTCCCCGAGAAGCGTGGCTACGATTCGTTTTTTTAATTGATTTTGTAACATAGAATGAAAATTAGTATCGTGAAAACATTTGGCGTGAGTATCCCGGATCAATCATGTGAGTCTTAAGTCCCATCAAAATTGTGTGAAATATAAAGTGTCGTCATACAGTGTCGTTCCTCTTCTGCTGCCGCTAGCGCTCCGGCTGTATC
********************************************************************************************************.(((((..((.(((....(((((..........................................)))))....))).))..)).))).......**************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body		 M020
head
 V119
head
.......................................................................................................................CGTGAAAACATTTGGCGTGAGTAT............................................................................................................ 24 0 20 22.35 447 370 68 7 2 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTGT................................................... 25 0 9 16.33 147 39 108 0 0 0
......................................................................................................................TCGTGAAAACATTTGGCGTGAGTAT............................................................................................................ 25 0 20 3.90 78 71 5 1 0 1
.................................................TTCTCCCCGAGAAGCGTGGCTACGAT................................................................................................................................................................................ 26 0 6 3.83 23 14 9 0 0 0
..................................................TCTCCCCGAGAAGCGTGGCTACGAT................................................................................................................................................................................ 25 0 6 2.33 14 7 7 0 0 0
.................................................TTCTCCCCGAGAAGCGTGGCTACGA................................................................................................................................................................................. 25 0 6 2.17 13 6 7 0 0 0
......................................................................................................................................................................................................................GTTCCTCTTCTGCTGCCGCTAGCGCT........... 26 0 6 2.00 12 0 11 0 1 0
.....................................................................................................................ATCGTGAAAACATTTGGCGTGAGTAT............................................................................................................ 26 0 20 1.55 31 22 7 1 0 1
.......................................................................................................................CGTGAAAACATTTGGCGTGAGTATC........................................................................................................... 25 0 20 1.30 26 22 3 1 0 0
..........................................GGAAGATTTCTCCCCGAGAAGCGTGGCT..................................................................................................................................................................................... 28 0 10 1.30 13 9 3 1 0 0
......................................................................................................................................................................................................................GTTCCTCTTCTGCTGCCGCTAGCGC............ 25 0 6 1.17 7 0 7 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTGTCGT................................................ 28 0 6 1.17 7 1 6 0 0 0
.....................................................................................................................................................................................................................CGTTCCTCTTCTGCTGCCGCTAGCGCT........... 27 0 6 1.17 7 0 7 0 0 0
................................................................................................................................................................................AAAATTGTGTGAAATATAAAGTGT................................................... 24 0 9 1.00 9 8 1 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTG.................................................... 24 0 9 1.00 9 0 9 0 0 0
..............................................................................................................................................................................TCAAAATTGTGTGAAATATAAAGTGT................................................... 26 0 9 0.89 8 3 5 0 0 0
.............................................................................................................................................................................ATCAAAATTGTGTGAAATATAAAGTGT................................................... 27 0 9 0.89 8 8 0 0 0 0
.......................................GAGGGAAGATTTCTCCCCGAGAAGCGT......................................................................................................................................................................................... 27 0 12 0.83 10 6 3 1 0 0
.......................................................................................................................................................................................................................TTCCTCTTCTGCTGCCGCTAGCGCT........... 25 0 6 0.83 5 0 5 0 0 0
........................................................................................................................GTGAAAACATTTGGCGTGAGTAT............................................................................................................ 23 0 20 0.80 16 9 7 0 0 0
.............................GTTGCAGGGGGAGGGAAGATTTCT...................................................................................................................................................................................................... 24 0 16 0.69 11 2 9 0 0 0
.................................................TTCTCCCCGAGAAGCGTGGCTAC................................................................................................................................................................................... 23 0 6 0.67 4 4 0 0 0 0
...................................................................................................................................................................................................................GTCGTTCCTCTTCTGCTGCCGCTAGCGCT........... 29 0 6 0.67 4 0 4 0 0 0
................................................................................................................................................................................AAAATTGTGTGAAATATAAAGTGTCGT................................................ 27 0 6 0.67 4 4 0 0 0 0
........................................................................................................................................................................................................................TCCTCTTCTGCTGCCGCTAGCGCT........... 24 0 8 0.63 5 1 4 0 0 0
.................................................................................................................................................................................................................GTGTCGTTCCTCTTCTGCTGCCGCT................. 25 0 8 0.63 5 2 2 1 0 0
.............................................AGATTTCTCCCCGAGAAGCGTGGCT..................................................................................................................................................................................... 25 0 11 0.55 6 4 2 0 0 0
............................................AAGATTTCTCCCCGAGAAGCGTGGCT..................................................................................................................................................................................... 26 0 10 0.50 5 3 2 0 0 0
..................................................TCTCCCCGAGAAGCGTGGCTACGA................................................................................................................................................................................. 24 0 6 0.50 3 1 2 0 0 0
...........................................................GGAGGGTGGCTACGATTC.............................................................................................................................................................................. 18 2 2 0.50 1 0 0 1 0 0
................................................TTTCTCCCCGAGAAGCGTGGCTACGAT................................................................................................................................................................................ 27 0 6 0.50 3 1 1 1 0 0
..........................................................................................................................................................................CCCATCAAAATTGTGTGAAATATAAAGT..................................................... 28 0 7 0.43 3 1 2 0 0 0
................................................................................................................TTAGTATCGTGAAAACATTTGGCGT.................................................................................................................. 25 0 20 0.35 7 3 4 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCGTGAGTA............................................................................................................. 23 0 20 0.35 7 0 7 0 0 0
......................................GGAGGGAAGATTTCTCCCCGAGAAGCGT......................................................................................................................................................................................... 28 0 12 0.33 4 1 3 0 0 0
.............................................................................................................................................ATCCGGGATCAATCATGTGAGTCTT..................................................................................... 25 1 3 0.33 1 1 0 0 0 0
................................................TTTCTCCCCGAGAAGCGTGGCTAC................................................................................................................................................................................... 24 0 6 0.33 2 1 1 0 0 0
.........................CCGGGTTGCATGGGTTGGGAA............................................................................................................................................................................................................. 21 3 3 0.33 1 1 0 0 0 0
...............................................ATTTCTCCCCGAGAAGCGTGGCTAC................................................................................................................................................................................... 25 0 6 0.33 2 2 0 0 0 0
................................................TTTCTCCCCGAGAAGCGTGGCTACGA................................................................................................................................................................................. 26 0 6 0.33 2 1 1 0 0 0
........................................AGGGAAGATTTCTCCCCGAGAAGCGTGGC...................................................................................................................................................................................... 29 0 9 0.33 3 3 0 0 0 0
...................................................CTCCCCGAGAAGCGTGGCTACGAT................................................................................................................................................................................ 24 0 6 0.33 2 1 1 0 0 0
..................................................................................................................................................................................AATTGTGTGAAATATAAAGTGTCGT................................................ 25 0 6 0.33 2 2 0 0 0 0
...................................................................................................................................................................................ATTGTGTGAAATATAAAGTGTCGT................................................ 24 0 6 0.33 2 0 2 0 0 0
...............................TGCAGGGGGAGGGAAGATTTCT...................................................................................................................................................................................................... 22 0 16 0.31 5 1 4 0 0 0
...............................................................................................................ATTAGTATCGTGAAAACATTTGGCGT.................................................................................................................. 26 0 20 0.30 6 1 5 0 0 0
..............................................GATTTCTCCCCGAGAAGCGTGGCT..................................................................................................................................................................................... 24 0 11 0.27 3 2 1 0 0 0
......................................GGAGGGAAGATTTCTCCCCGAGAAGC........................................................................................................................................................................................... 26 0 12 0.25 3 0 3 0 0 0
..................................................................................................................................TTGGCGTGACTATCCGGGATCAAT................................................................................................. 24 2 4 0.25 1 1 0 0 0 0
..........................................................................................................................................................................................................................CTCTTCTGCTGCCGCTAGCGCT........... 22 0 8 0.25 2 1 1 0 0 0
.......................................GAGGGAAGATTTCTCCCCGAGAAGCGTGGC...................................................................................................................................................................................... 30 0 9 0.22 2 2 0 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAAGT..................................................... 23 0 9 0.22 2 0 2 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTGTC.................................................. 26 0 9 0.22 2 0 2 0 0 0
..............................TTGCAGGGGGAGGGAAGATTT........................................................................................................................................................................................................ 21 0 19 0.21 4 0 4 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAA....................................................... 21 0 10 0.20 2 0 2 0 0 0
...................................................................................................................GTATCGTGAAAACATTTGGCGTGAGT.............................................................................................................. 26 0 20 0.20 4 1 3 0 0 0
.........................................................................................................................................................................................................GTCATACAGTGTCGTTCCTCTTCTGC........................ 26 0 16 0.19 3 0 3 0 0 0
.........................................................................................................................................................................................................GTCATACAGTGTCGTTCCTCTTCTGCT....................... 27 0 16 0.19 3 0 3 0 0 0
..............................TTGCAGGGGGAGGGAAGATTTCT...................................................................................................................................................................................................... 23 0 16 0.19 3 0 3 0 0 0
...............................................ATTTCTCCCCGAGAAGCGTGGCT..................................................................................................................................................................................... 23 0 11 0.18 2 2 0 0 0 0
.....................................GGGAGGGAAGATTTCTCCCCGAGAAGC........................................................................................................................................................................................... 27 0 12 0.17 2 2 0 0 0 0
..................................................TCTCCCCGAGAAGCGTGGCTAC................................................................................................................................................................................... 22 0 6 0.17 1 0 1 0 0 0
.....................................................................................................................................................................................................................CGTTCCTCTTCTGCTGCCGCTAGCGC............ 26 0 6 0.17 1 0 1 0 0 0
.............................................................................................................................................................................................................................TTCTGCTGCCGCTAGCGCTCCGGCTGT... 27 0 6 0.17 1 0 1 0 0 0
..................................................................................................................................................................................................................................CTGCCGCTAGCGCTCCGGCTGTAT. 24 0 6 0.17 1 0 1 0 0 0
.......................................................................................................................................................................................................................TTCCTCTTCTGCTGCCGCTAGCGC............ 24 0 6 0.17 1 0 1 0 0 0
.......................................TAGGGAAGATTTCTCCCCGAGAAGCGT......................................................................................................................................................................................... 27 1 12 0.17 2 2 0 0 0 0
.................................................................................................................................................................................AAATTGTGTGAAATATAAAGTGTCGT................................................ 26 0 6 0.17 1 1 0 0 0 0
...............................................................................................................................................................................................................................CTGCTGCCGCTAGCGCTCCGGCTGTAT. 27 0 6 0.17 1 0 1 0 0 0
.....................................................................................................................................................................................................................CGTTCCTCTTCTGCTGCCGCTAGC.............. 24 0 6 0.17 1 1 0 0 0 0
.................................................TCCTCCCCGAGAAGCGTGGCTACGAT................................................................................................................................................................................ 26 1 6 0.17 1 1 0 0 0 0
.....................................................................................................................................................................................................................AATTCCTCTTCTGCTGCCGCTAGCGCT........... 27 2 6 0.17 1 0 1 0 0 0
......................................................................................................................................................................................GTGTGAAATATAAAGTGTCGTCAT............................................. 24 0 6 0.17 1 0 1 0 0 0
....................................................................................................................................................................................................................TCGTTCCTCTTCTGCTGCCGCTAGC.............. 25 0 6 0.17 1 1 0 0 0 0
...................................................................................................................................................................................................................AGCATTCCTCTTCTGCTGCCGCTAGCGCT........... 29 3 6 0.17 1 0 1 0 0 0
.............................................................................................................................................................................................................................CTCTGCTGCCGCTAGCGCTCCGGCTGT... 27 1 6 0.17 1 1 0 0 0 0
...................................................................................................................................................................................................................GTCGTTCCTCTTCTGCTGCCGCTAGC.............. 26 0 6 0.17 1 0 1 0 0 0
.......................................GAGGGAAGATTTCTCCCCGAGAAGCG.......................................................................................................................................................................................... 26 0 12 0.17 2 1 1 0 0 0
........................................AGGGAAGATTTCTCCCCGAGAAGCGT......................................................................................................................................................................................... 26 0 12 0.17 2 2 0 0 0 0
.......................................GAGGGAAGATTTCTCCCCGAGAAGC........................................................................................................................................................................................... 25 0 12 0.17 2 2 0 0 0 0
.............................................AAATTTCTCCCCGAGAAGCGTGGCTAC................................................................................................................................................................................... 27 1 6 0.17 1 0 1 0 0 0
................................................................................................................................................................................................................AGTGTCGTTCCTCTTCTGCTGCCGCT................. 26 0 6 0.17 1 1 0 0 0 0
......................................................................................................................................................................................................................GTTCCTCTTCTGCTGCCGCTAGCG............. 24 0 6 0.17 1 0 1 0 0 0
......................................................................................................................................................................................................................GTTCCTCTTCTGCTGCCGCTAGC.............. 23 0 6 0.17 1 1 0 0 0 0
...............................................CTTTCTCCCCGAGAAGCGTGGCTACGA................................................................................................................................................................................. 27 1 6 0.17 1 0 1 0 0 0
..........................................GGAAGATTTCTCCCCGAGAAGCGT......................................................................................................................................................................................... 24 0 13 0.15 2 0 2 0 0 0
.....................................TGGAGGGAAGATTTCTCCCCGAGAAGC........................................................................................................................................................................................... 27 1 13 0.15 2 1 1 0 0 0
...................................................................................................................................................................................................................................TGCCGCTAGCGCTCCGGCTGTAT. 23 0 7 0.14 1 1 0 0 0 0
....................................................................................................................................................................................................................................GCCGCTAGCGCTCCGGCTGTAT. 22 0 7 0.14 1 0 1 0 0 0
......................................GGAGGGAAGATTTCTCCCCAAGAAGC........................................................................................................................................................................................... 26 1 14 0.14 2 0 2 0 0 0
....................................................TCCCCGAGAAGCGTGGCTACGAT................................................................................................................................................................................ 23 0 7 0.14 1 1 0 0 0 0
...........................................................................................................................................................................................................................TCTTCTGCTGCCGCTAGCGCTC.......... 22 0 7 0.14 1 0 1 0 0 0
............................GGTTGCAGGGGGAGGGAAGATTTCT...................................................................................................................................................................................................... 25 0 15 0.13 2 0 2 0 0 0
....................................................................................................................................................................................................................TCGTTCCTCTTCTGCTGCCGCT................. 22 0 8 0.13 1 0 1 0 0 0
..........................................................................................................................................................................CCCATCAAAATTGTGTGAAATATA......................................................... 24 0 8 0.13 1 0 1 0 0 0
.................................................................................................................................................................GTCTTAAGTCCCATCAAAATTGTGT................................................................. 25 0 8 0.13 1 0 1 0 0 0
..................................................................................................................................................................................................................TGTCGTTCCTCTTCTGCTGCCGCT................. 24 0 8 0.13 1 0 1 0 0 0
............................................................................................................................................................................................................................CTTCTGCTGCCGCTAGCGCT........... 20 0 8 0.13 1 0 1 0 0 0
...................................................................................................................................................................................................................GTCGTTCCTCTTCTGCTGCCGCT................. 23 0 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................................................TCTTCTGCTGCCGCTAGCGCT........... 21 0 8 0.13 1 1 0 0 0 0
......................................................................................................................................................................................................................GTTCCTCTTCTGCTGCCGCT................. 20 0 8 0.13 1 1 0 0 0 0
...............................................................................................................................................................GAGTCTTAAGTCCCATCAAAATTGTGT................................................................. 27 0 8 0.13 1 1 0 0 0 0
..........................................................................................................................................................................CCCATCAAAATTGTGTGAAATA........................................................... 22 0 8 0.13 1 0 1 0 0 0
.................................................................................................................................................................................................................GTGTCGTTCCTCTTCTGCTGCCGC.................. 24 0 8 0.13 1 1 0 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAGATATAAAGTGT................................................... 25 1 9 0.11 1 0 1 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTGC................................................... 25 1 9 0.11 1 0 1 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTGTA.................................................. 26 1 9 0.11 1 0 1 0 0 0
................................................................................................................................................................................AAAATTGTGTGAAATATAAAGTGC................................................... 24 1 9 0.11 1 1 0 0 0 0
............................................................................................................................................................................CATCAAAATTGTGTGAAATATAAAGTGT................................................... 28 0 9 0.11 1 0 1 0 0 0
............................GGTTGCAGGGGGAGGGAAGATTT........................................................................................................................................................................................................ 23 0 18 0.11 2 0 2 0 0 0
...............................................................................................................................................................................CAAAATTGTATGAAATATAAAGTGT................................................... 25 1 9 0.11 1 0 1 0 0 0
...............................................................................................................................................................................CAAAATCGTGTGAAATATAAAGTGT................................................... 25 1 9 0.11 1 1 0 0 0 0
..............................................................................................................................................................................ACAAAATTGTGTGAAATATAAAGTGT................................................... 26 1 9 0.11 1 1 0 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGATATATAAAGTGT................................................... 25 1 9 0.11 1 0 1 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTT.................................................... 24 1 9 0.11 1 0 1 0 0 0
...............................TGCAGGGGGAGGGAAGATT......................................................................................................................................................................................................... 19 0 19 0.11 2 1 1 0 0 0
...........................................GAAGATTTCTCCCCGAGAAGCGTGGCT..................................................................................................................................................................................... 27 0 10 0.10 1 1 0 0 0 0
..................................................................................................................................................................................AATTGTGTGAAATATAAAGTGT................................................... 22 0 10 0.10 1 1 0 0 0 0
...............................................................................................................................................................................CAAAATTGTGTGAAATAT.......................................................... 18 0 10 0.10 1 0 1 0 0 0
...........................................................................................................................AAAACATTTGGCGTGAGTAT............................................................................................................ 20 0 20 0.10 2 2 0 0 0 0
..........................................GGAAGATTTCTCCCCGAGAAGCGTGGC...................................................................................................................................................................................... 27 0 10 0.10 1 0 1 0 0 0
...................................................................................................................................................................................TTTGTGTGAAATATAAAGTGT................................................... 21 1 10 0.10 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCGTGAGTATCC.......................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
......................................................................................................................TCGTGAAAACATTTGGCGTGAGTATC........................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
.....................................................CCCCGAGAAGCGTGGCTACGAT................................................................................................................................................................................ 22 0 10 0.10 1 0 1 0 0 0
..........................................................................................................................................................CATGTGAGTCTTAAGTCCCATCAAAAT...................................................................... 27 0 10 0.10 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTTGCGTGAGTAT............................................................................................................ 24 1 20 0.10 2 2 0 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCGTGAGT.............................................................................................................. 22 0 20 0.10 2 1 0 1 0 0
..............................................................................................................AATTAGTATCGTGAAAACATTTGGCG................................................................................................................... 26 0 20 0.10 2 0 2 0 0 0
...............................................ATTTCTCCCCGAGAAGCGTGGCTA.................................................................................................................................................................................... 24 0 11 0.09 1 1 0 0 0 0
.............................................AGATTTCTCCCCGAGAAGCTTGGCTA.................................................................................................................................................................................... 26 1 11 0.09 1 1 0 0 0 0
..............................................GATTTCTCCCCGAGAAGCGTGGC...................................................................................................................................................................................... 23 0 11 0.09 1 0 1 0 0 0
....................................GGGGAGGGAAGATTTCTCCCCGAGCAGC........................................................................................................................................................................................... 28 1 11 0.09 1 1 0 0 0 0
........................................AGGGAAGATTTCTCCCCGAGAAGCGTG........................................................................................................................................................................................ 27 0 11 0.09 1 1 0 0 0 0
............................................................................................................AAAATTAGTATCGTGAAAACATTTGGC.................................................................................................................... 27 0 11 0.09 1 0 1 0 0 0
............................................................................................................AAAATTAGTATCGTGAAAACATTT....................................................................................................................... 24 0 11 0.09 1 1 0 0 0 0
....................................GGGGAGGGAAAATTTCTCCCCCAGAAGC........................................................................................................................................................................................... 28 2 11 0.09 1 1 0 0 0 0
.................................................TTCTCCCCGAGAAGCGTGGCTAAGA................................................................................................................................................................................. 25 1 11 0.09 1 1 0 0 0 0
..............................................GATTTCTCCCCGAGAAGCGTGGCTA.................................................................................................................................................................................... 25 0 11 0.09 1 0 1 0 0 0
...................................GGGGGAGGGAAGATTTCTCCCCGAGAAGC........................................................................................................................................................................................... 29 0 11 0.09 1 1 0 0 0 0
....................................GGGGAGGGAAGATTTCTCCCCGAGAAGC........................................................................................................................................................................................... 28 0 11 0.09 1 1 0 0 0 0
................................................TTTCTCCCCGAGAAGCGTGGCTA.................................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0
.......................................GAGGGAAGATTTCTCCCCGAGAAGCC.......................................................................................................................................................................................... 26 1 12 0.08 1 0 1 0 0 0
..........................................GGAAGATTTCTCCCCGAGAATCGTGGCT..................................................................................................................................................................................... 28 1 12 0.08 1 1 0 0 0 0
......................................GGAGGGAAGATTTCTCCCCCAGAAGC........................................................................................................................................................................................... 26 1 12 0.08 1 1 0 0 0 0
.....................................AAGAGGGAATATTTCTCCCCGAGAAGCGT......................................................................................................................................................................................... 29 3 12 0.08 1 1 0 0 0 0
...........................................................................................................................................................ATGTGAGTCTTAAGTCCCATCAAAAT...................................................................... 26 0 12 0.08 1 0 1 0 0 0
......................................TGAGGGAAGATTTCTCCCCGAGAAGCGT......................................................................................................................................................................................... 28 1 12 0.08 1 1 0 0 0 0
.......................................AAGGGAAGATTTCTCCCCGAGAAGCGT......................................................................................................................................................................................... 27 1 13 0.08 1 1 0 0 0 0
.................................................................................................................................................................................................AAAGTGTCGTCATACCGTGTCGTTCCT............................... 27 1 13 0.08 1 0 1 0 0 0
....................................GGGGAGGGAAGATTTCTCCCCAAGAAGC........................................................................................................................................................................................... 28 1 13 0.08 1 0 1 0 0 0
.....................................................................................................................................................................................................TGTCGTCATACAGTGTCGTTCCTCT............................. 25 0 13 0.08 1 1 0 0 0 0
.....................................GGGAGCGAAGATTTCTCCCCGAGAAG............................................................................................................................................................................................ 26 1 14 0.07 1 1 0 0 0 0
.......................................GAGGGAAGATTTCTCCCCGAGAAGAGT......................................................................................................................................................................................... 27 1 14 0.07 1 1 0 0 0 0
.....................................GGGAGGGAAGATTTCTCCCCGAGAATC........................................................................................................................................................................................... 27 1 14 0.07 1 1 0 0 0 0
......................................GGAGGGAAGATTTCTCCCCAAGAAGCG.......................................................................................................................................................................................... 27 1 14 0.07 1 0 1 0 0 0
.............................................................................................................................................................GTGAGTCTTAAGTCCCATCAAAATTGT................................................................... 27 0 14 0.07 1 0 1 0 0 0
...............................................................................................................................................................GAGTCTTAAGTCCCATCAAAATTGT................................................................... 25 0 14 0.07 1 1 0 0 0 0
....................................GGGGAGGGAAGATTTCTCCCCGAG............................................................................................................................................................................................... 24 0 15 0.07 1 0 1 0 0 0
......................................................................................................................................................................................................................................CGCTAGCGCTCCGGCTGTAT. 20 0 16 0.06 1 0 1 0 0 0
.............................GTTGCAGGGCGAGGGAAGATTTCT...................................................................................................................................................................................................... 24 1 16 0.06 1 1 0 0 0 0
..............................TTGCAGGGGGAGGGAAGATTTCTC..................................................................................................................................................................................................... 24 0 16 0.06 1 0 1 0 0 0
...............................................ATTTCTCCACGAGAAGCGTGGCT..................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0 0
..........................................................................................................................................................................................................TCATACAGTGTCGTTCCTCTTCTGC........................ 25 0 16 0.06 1 0 1 0 0 0
...............................................................................................................................................................................................................CAGTGTCGTTCCTCTTCTGCT....................... 21 0 16 0.06 1 0 1 0 0 0
.....................................GGGAGGGAAGATTTCTCCCCGAGAA............................................................................................................................................................................................. 25 0 16 0.06 1 1 0 0 0 0
............................................................................................................................................................................................................ATACAGTGTCGTTCCTCTTCTGCT....................... 24 0 16 0.06 1 0 1 0 0 0
.........................................................................................................................................................................................................GTCATACAGTGTCGTTCCTCTTC........................... 23 0 16 0.06 1 0 1 0 0 0
...............................TGCAGGGGGAGGGAAGATTTAT...................................................................................................................................................................................................... 22 1 17 0.06 1 1 0 0 0 0
................................GCAGGGGGAGGGAAGATTTCT...................................................................................................................................................................................................... 21 0 17 0.06 1 0 1 0 0 0
............................GGTTGCAGGGGGAGGGAAGA........................................................................................................................................................................................................... 20 0 18 0.06 1 0 1 0 0 0
...........................GGGTTGCAGGGGGAGGGAAGATTT........................................................................................................................................................................................................ 24 0 18 0.06 1 1 0 0 0 0
............................GGTTGCAGGGGGAGGGAAGATT......................................................................................................................................................................................................... 22 0 18 0.06 1 0 1 0 0 0
..........................CGGGTTGCAGGGGGAGGGAAGAT.......................................................................................................................................................................................................... 23 0 18 0.06 1 1 0 0 0 0
...............................TGCAGGGGGAGGGAAGATTT........................................................................................................................................................................................................ 20 0 19 0.05 1 0 1 0 0 0
.............................GTTGCAGGGGGAGGGAAGATTT........................................................................................................................................................................................................ 22 0 19 0.05 1 0 1 0 0 0
.............................GTTGCAGGGGGAGGGAAGAT.......................................................................................................................................................................................................... 20 0 19 0.05 1 0 1 0 0 0
........................................................................................................................TTGAAAACATTTGGCGTGAGTAT............................................................................................................ 23 1 20 0.05 1 1 0 0 0 0
CCCTGGTGAACAACCACCCACGC.................................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCGCGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................ATCGTGAAAACATTTGGCGTTAGTATC........................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
...................................................................................................................GTATCGTGAAAACATTTGGCGTGAG............................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
.......................................................................................................................CGTGAAAACATTTGGGGTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
...........................................................................................................................AAAAAAATTGGCGTGAGTAT............................................................................................................ 20 2 20 0.05 1 1 0 0 0 0
.....................................................................................................................ATCGTGAAAACATTTGGCGTGAGTAG............................................................................................................ 26 1 20 0.05 1 0 1 0 0 0
........................................................................................................................CGTAAAACATTTGGCGTGAGTAT............................................................................................................ 23 3 20 0.05 1 1 0 0 0 0
....................................................................................................................TATCGTGAAAACATTTGG..................................................................................................................... 18 0 20 0.05 1 0 1 0 0 0
........................................................................................................................GTGAAAACGTTTGGCGTGAGTAT............................................................................................................ 23 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTGGGCGTGAGTAT............................................................................................................ 24 1 20 0.05 1 0 1 0 0 0
.......................................................................................................................................................................................................................................GCTAGCGCTCCGGACGTCT. 19 3 20 0.05 1 0 1 0 0 0
.......................................................................................................................CGTGAAAACATTGGGCGTGAGTATC........................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
....................................................................................................................AATCGTGAAAACATTTGGCGTGAGTAT............................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
......................................................................................................................TCGTGAAAACATTTGGCGTGAATAT............................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCGTG................................................................................................................. 19 0 20 0.05 1 0 1 0 0 0
.......................................................................................................................CGTGAAAACATCTGGCGTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................ATCGTGAAGACATTTGGCGTGAGTAT............................................................................................................ 26 1 20 0.05 1 1 0 0 0 0
.................................................................................................................TAGTATCGTGAAAACATTTGGCGT.................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCGTGATTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATCTGGCGTGAGTA............................................................................................................. 23 1 20 0.05 1 0 1 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCTTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
......................................................................................................................TCGTGAAAACATTTGGCTTGAGTAT............................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.............................................................................................................AAATTAGTATCGTGAAAACAT......................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCGTGAGCAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCATGAGTATC........................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGACAACATTTGGCGTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGGGAAAACATTTGGCGTGAGTATC........................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTTAAAACATTTGGCGTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTAGCGTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
...................................AGGGGAGGGAAGATTTCT...................................................................................................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTTGGCGTGCGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................GTAAAACATTCGGCGTGAGTAT............................................................................................................ 22 3 20 0.05 1 0 1 0 0 0
......................................................................................................................TCGTGAAAACATTTGGCGTGAGT.............................................................................................................. 23 0 20 0.05 1 0 1 0 0 0
................................................................................................................TAAGTATCGTGAAAACATTTGGCGT.................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
.......................................................................................................................CGTGAAAACATTAGGCGTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
.............................................................................................................AAATTAGTATCGTGAAAACATTTGGCGT.................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACATTGGGCGTGATTAT............................................................................................................ 24 2 20 0.05 1 1 0 0 0 0
.......................................................................................................................CGTGAAAACCTTTGGCGTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
..................................................................................................................AGTATCGTGAAAACATTTGGCGTGAGT.............................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
.................................................................................................................AATTATCGTGAAAACATTTGGCGT.................................................................................................................. 24 2 20 0.05 1 0 1 0 0 0
.......................................................................................................................CGTGAAAACATTTGGAGTGAGTAT............................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
............................................................................................................................AAAAATTTGGCGTGAGTAT............................................................................................................ 19 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................ATCGTGAAAACATTTGGCGTGAGTATC........................................................................................................... 27 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004929:17275-17525 - dwi_3056 GGGACCACTTGTTGGTGGGTGCGCCGGCCCAACGTCCCCCTCCC-TTCTAAAGAGGGGCTCTTCG------------------------------CACCGATGCTAAGCAAAA-AAA----------TTAACTAAAACATTGTATCTTACTTTTAATCATAGCACTTTTGTAAACCGCACTCATAGGGCCTAGTTAGTACACTCAGAATTCAGGGTAGTTTTAACACACTTTATATTTCACAGCAGTATGTCACAGCAAGGAGAAGACGACGGCGATCGCGAGGCCGACATAG
dp5 Unknown_group_136:9389-9471 + GG-GCCACTTATGGT--AGTGCGCTGCCGTAATGTCCTCGCCCCGC---AAGGG-TAAAC-C--G------------------------------CGTCCACACTCAGTAAGATAGC----------TTAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_122:87241-87324 - GG-GCCACTTATGGT--AGTGCGCTGCCGTAATGTCCTCGCCCCGC---AAGGG-GAAAC-C--G------------------------------CGTCCACACTCAGTAAGATAGC----------TTAACT-----------------------------------------------------------------A----------------------------------------------------------------------------------------------
droKik1 scf7180000298476:312-410 - GGGGCCACTTGCTGACAGGCGCGCCTGTCCAACGCTCCTACCCCCCT--AGGGGGGAAACATGTG------------------------------CCCTCTCTTTCGTAAAAA-AAA----------AAAACTTAGAA---------------------------------------------------------ATCG----------------------------------------------------------------------------------------------
droEle1 scf7180000490276:45742-45788 + GGGGCCACTTGCTGGACGGCGCGCCTTCCCAACGTGCCCACTCCCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000772536:6608-6661 + GGGGCTACTTGCTGGACGGTGCGCCTTCCCAACGTCCCCACTCCCCT--AAGGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302168:223888-224018 - GGGGCCACTTGCTGGAGGGTGTGCCTTCCCAACGTTCC-ACTTCCCT--AGTGG-GAACTCAACGCTCCTAGTGC-CACTGTAGCGAACCTTTTTTCCCCATGATTACTAA------CTAAACTATTAAA------GC---------------------------------------------------CCAGTTAGTA----------------------------------------------------------------------------------------------
droTak1 scf7180000412248:4449-4562 - GGGGCCACTTGCTGGAGGGTGCGCCTTCCCAACGTCCCCACTCCCCT--CAGGGGAAACTCAATGCTCCCAGTGCCCACTGTAGCT------TAGC-----CCCTCTAACTAC-AAA----------CTAACTAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409265:6892-6991 - GGGGCCACTTGCTGGAGGGTGCGCCTTCCCAACGCTCCGAGTGCCAC--TGTAGCGAA-C-T--T--------------------------TTTCTCCCCATGTTTACTAA------CTAAACAATTAAA------ACCTAGT-------------------------------------------------------A----------------------------------------------------------------------------------------------
droYak3 v2_chrUn_1951:886-941 + GGGGCCACTTGCTGGTAGGCGCGACTACCCAACGTCCCT-CCCCGC---AAGGG-GAACTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:22017831-22017884 - GGGGCCACTTGACGCTGGGTGCGCTCAGCCAACGTCCCCACCCCCGC--TGGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GGGACCACTTGTTGGTGGGTGCGCCGGCCCAACGTCCCCCTCCC-TTCTAAAGAGGGGCTCTTCG------------------------------CACCGATGCTAAGCAAAA-AAA----------TTAACTAAAACATTGTATCTTACTTTTAATCATAGCACTTTTGTAAACCGCACTCATAGGGCCTAGTTAGTACACTCAGAATTCAGGGTAGTTTTAACACACTTTATATTTCACAGCAGTATGTCACAGCAAGGAGAAGACGACGGCGATCGCGAGGCCGACATAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................CACTTTTGTAAACCGCACTCATAGGGC........................................................................................................27170.29503020
..................................................................................................................................................................CACTTTTGTAAACCGCACTCATAGGG.........................................................................................................26180.22404000
...................................................................................................................................................................ACTTTTGTAAACCGCACTCATAGGGCC.......................................................................................................27190.21404000
........................................................................................................................................................................................................................................................................AGACGACGGCGATCGCGAGGCCGACT...2660.17100010
........................................................................................................................................................................................................................................................................AGACGACGGCGATCGCGAGGCCGT.....2460.17100010
.......................................................................................................................................................................................................................................................................AAGACGACGGCGATCGCGAGGCCGT.....2560.17100010
....................................................................................................................................................................................................................................................................GAGAAGACGACGGCGATCGCGAGG.........2470.14101000
.....................................................AGGGGCTCTTCG------------------------------CACCGATGC.............................................................................................................................................................................................2170.14101000
.....................................................AGGGGCTCTTCG------------------------------CACCGATG..............................................................................................................................................................................................2070.14101000
..............................................................................................................................................................................................................................................................AGCAAGGAGAAGACGACGGCGA.................2280.13101000
...................................................................................................................................................................................................................................................CAGTATGTCACAGCAAGGAGAAG...........................23160.13201100
..................................................................................................................................................................CACTTTTGTAAACCGCACTCATAGGGCC.......................................................................................................28170.12202000
...................................................................................................................................................................ACTTTTGTAAACCGCACTCATAGGGC........................................................................................................26190.11202000
..................................................................................................................................................................CACTTTTGTAAACCGCACTCATAGG..........................................................................................................25200.10202000
...................................................................................................................................................................ACTTTTGTAAACCGCACTCATAGGG.........................................................................................................25200.10201010
..................................................................................................................................................................CACTTTTGTAAACCGCACTCATAG...........................................................................................................24200.10202000
.....................................................................................................................................................................TTTTGTAAACCGCACTCATAGG..........................................................................................................22200.10202000
.......................................................................................................................................................TTTAATCATAGCACTTTTGTAAACCGCAC.................................................................................................................29200.10202000
..................................................................................................................................................................CACTTTTGTAAACCGCACTCATA............................................................................................................23200.10202000
.......................................................GGGCTCTTCG------------------------------CACCGATGCTA...........................................................................................................................................................................................21100.10101000
...........................................C-TTCTAAAGAGGGGCTCTTCG------------------------------CAC...................................................................................................................................................................................................24120.08101000
...................................................................................................................................................................................................................................................CAGTATGTCACAGCAAGGAGAAGA..........................24160.06101000
....................................................................................................................................................................CTTTTGTAAACCGCACTCATAGGGCCT......................................................................................................27170.06101000
..........................................................................................................................................................................................................TCAGAATTCAGGGTAGTTTTAACA...................................................................24180.06101000
....................................................................................................................................................................CTTTTGTAAACCGCACTCATAGGGCC.......................................................................................................26190.05101000
........................................................................................................................................................................................................................................ATATTTCACAGCAGTATGTC.........................................20200.05101000
....................................................................................................................................................................CTTTTGTAAACCGCACTCATAGGG.........................................................................................................24200.05101000
....................................................................................................................................................................CTTTTGTAAACCGCACTCA..............................................................................................................19200.05101000
....................................................................................................................................................................CTTTTGTAAACCGCACTCATA............................................................................................................21200.05101000
........................................................................................................................................................TTAATCATAGCACTTTTGTAAA.......................................................................................................................22200.05101000
.........................................................................................................................................................TAATCATAGCACTTTTGTAAACCG....................................................................................................................24200.05101000
.......................................................................................................................................................................TTGTAAACCGCACTCATAGGGCCT......................................................................................................24200.05101000
..........................................................................................................................................................AATCATAGCACTTTTGTAAACCGC...................................................................................................................24200.05101000
...................................................................................................................................................................ACTTTTGTAAACCGCACTCATAG...........................................................................................................23200.05101000
dp5
GG-GCCACTTATGGT--AGTGCGCTGCCGTAATGTCCTCGCCCCGC---AAGGG-TAAAC-C--G------------------------------CGTCCACACTCAGTAAGATAGC----------TTAACT----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................TGCGCTGCCGTAATGTCCTCGCCC..........................................................................................................................................................................................................................................................2470.5740310000000
..............T--AGTGCGCTGCCGTAATGTCCTCGCCC..........................................................................................................................................................................................................................................................2730.3310100000000
........................TGCCGTAATGTCCTCGCCCCGC---....................................................................................................................................................................................................................................................2250.2010100000000
...................TGCGCTGCCGTAATGTCCTCGC............................................................................................................................................................................................................................................................22110.1820200000000
...................TGCGCTGCCGTAATGTCCTCGCC...........................................................................................................................................................................................................................................................23110.1820200000000
....................GCGCTGCCGTAATGTCCTCGCCC..........................................................................................................................................................................................................................................................2370.1410100000000
........................TGCCGTAATGTCCTCGCC...........................................................................................................................................................................................................................................................18110.0910100000000
droPer2
GG-GCCACTTATGGT--AGTGCGCTGCCGTAATGTCCTCGCCCCGC---AAGGG-GAAAC-C--G------------------------------CGTCCACACTCAGTAAGATAGC----------TTAACT-----------------------------------------------------------------A----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................TCGCCCCGC---AAGGG-GAAAC-C--G------------------------------CGTC..................................................................................................................................................................................................25140.071010000
.........................................CCCGC---AAGGG-GAAAC-C--G------------------------------CGTC..................................................................................................................................................................................................21160.061010000
.............................TAATGTCCTCGCCCCGC---AAGG................................................................................................................................................................................................................................................21200.051010000
...................TGCGCTGCCGTAATGTCCTCGC............................................................................................................................................................................................................................................................22200.051010000
droKik1
GGGGCCACTTGCTGACAGGCGCGCCTGTCCAACGCTCCTACCCCCCT--AGGGGGGAAACATGTG------------------------------CCCTCTCTTTCGTAAAAA-AAA----------AAAACTTAGAA---------------------------------------------------------ATCG----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GGGGCCACTTGCTGGACGGCGCGCCTTCCCAACGTGCCCACTCCCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GGGGCTACTTGCTGGACGGTGCGCCTTCCCAACGTCCCCACTCCCCT--AAGGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GGGGCCACTTGCTGGAGGGTGTGCCTTCCCAACGTTCC-ACTTCCCT--AGTGG-GAACTCAACGCTCCTAGTGC-CACTGTAGCGAACCTTTTTTCCCCATGATTACTAA------CTAAACTATTAAA------GC---------------------------------------------------CCAGTTAGTA----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GGGGCCACTTGCTGGAGGGTGCGCCTTCCCAACGTCCCCACTCCCCT--CAGGGGAAACTCAATGCTCCCAGTGCCCACTGTAGCT------TAGC-----CCCTCTAACTAC-AAA----------CTAACTAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GGGGCCACTTGCTGGAGGGTGCGCCTTCCCAACGCTCCGAGTGCCAC--TGTAGCGAA-C-T--T--------------------------TTTCTCCCCATGTTTACTAA------CTAAACAATTAAA------ACCTAGT-------------------------------------------------------A----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
GGGGCCACTTGCTGGTAGGCGCGACTACCCAACGTCCCT-CCCCGC---AAGGG-GAACTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GGGGCCACTTGACGCTGGGTGCGCTCAGCCAACGTCCCCACCCCCGC--TGGGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 06:00 AM