ID:

dwi_3055

 Coordinate:

scf2_1100000004928:28849-28999 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.1

Flybase annnotation

CDS [Dwil\GK21304-cds]; exon [dwil_GLEANR_4399:1]; intron [Dwil\GK21304-in]

Repeatable elements

NameClassFamilyStrand
Transib1_DPDNACMC-Transib+
BEL-4_DWil-I-intLTRPao-
mature
  1. scf2_1100000007774:67-89 -
  2. scf2_1100000003517:1375-1397 -
  3. scf2_1100000003553:5864-5886 -
  4. scf2_1100000004072:1761-1783 -
  5. scf2_1100000004577:1035807-1035829 -
  6. scf2_1100000004840:568-590 -
  7. dwi_3055  scf2_1100000004928:28913-28935 -
  8. scf2_1100000004928:143331-143353 -
  9. scf2_1100000004936:516069-516091 -
  10. scf2_1100000004950:78482-78504 -
  11. scf2_1100000004965:860222-860244 +
  12. scf2_1100000004967:190883-190905 -
  13. scf2_1100000004967:199665-199687 +
  14. scf2_1100000004968:3257823-3257845 -
  15. scf2_1100000001065:2640-2662 -
  16. scf2_1100000010200:1009-1031 -
  17. scf2_1100000000356:6798-6820 -
  18. scf2_1100000000008:3553-3575 +
  19. scf2_1100000000083:390-412 -
  20. scf2_1100000000635:516-538 -
star
  1. scf2_1100000007787:705-727 -
  2. scf2_1100000001263:3148-3170 +
  3. scf2_1100000002992:217-239 -
  4. scf2_1100000003478:4037-4059 +
  5. scf2_1100000003669:1975-1997 -
  6. scf2_1100000004384:6968-6990 -
  7. dwi_981  scf2_1100000004514:1223968-1223990 +
  8. scf2_1100000004536:17641-17663 +
  9. scf2_1100000004577:1035845-1035867 -
  10. scf2_1100000004888:975594-975616 +
  11. dwi_3055  scf2_1100000004928:28951-28973 -
  12. scf2_1100000004931:24116-24138 +
  13. scf2_1100000004961:3266400-3266422 +
  14. scf2_1100000004965:860184-860206 +
  15. scf2_1100000004967:199627-199649 +
  16. scf2_1100000004967:4473269-4473291 +
  17. scf2_1100000004968:3257861-3257883 -
  18. scf2_1100000004975:92501-92523 +
  19. scf2_1100000000008:3515-3537 +
  20. scf2_1100000000420:1427-1449 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAACATACCAGTTGAGCATCGAGAATCAAGCGGATTGTTACACATGGAAGGTAATGATACTATTCGCACTTTAAGTCTATACTGGAGTCCCAAAGAAGATGAATTCCGTTTTGCTTTGCATGTCGTTCCACCAATGAGCTCACCTTTCTTCCTTGCCATTTTTTAAACCACAATCTGTATAATATTTTGAGCAGCAATTCAAAAATGCGTATCCAAGCGTGAAATGGACTCACGGATCCATATTGAAGATG
****************************************************************************......(((((...(((((((((((.....)))))).))))).......))))).......****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V118
embryo
..................TCGAGAATCAAGCGGATTGTTACAC................................................................................................................................................................................................................ 25 0 20 0.15 3 0 3 0
..................TCGAGAATCAAGCGGATTGTTACACA............................................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0
..............AGCATCGAGAATCAAGCGGATTGT..................................................................................................................................................................................................................... 24 0 20 0.15 3 3 0 0
..................TCGAGAATCAAGCGGATTGTTAC.................................................................................................................................................................................................................. 23 0 20 0.15 3 3 0 0
..................TCGAGAATCAAGCGGATTGTTACA................................................................................................................................................................................................................. 24 0 20 0.15 3 3 0 0
......................................................................................................................................................................................TATTTTGGGGAGCAAATCAAAAA.............................................. 23 3 8 0.13 1 0 0 1
...............GCATCGAGAATCAAGCGGATTGTT.................................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0
..............AGCATCGAGAATCAAGCGGATTG...................................................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0
...................CGAGAATCAAGCGGATTGTTACACA............................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0
...................CGAGAATCAAGCGGATTGTTACACATG............................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0
...CATACCAGTTGAGCATCGAGA................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0
..............AGCATCGAGAATCAAGCGGATTGTT.................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0
...............GCATCGAGAATCAAGCGGATTGTTAC.................................................................................................................................................................................................................. 26 0 20 0.05 1 0 1 0
..................................................................................................................TTTGCATGTCGTTCCACCAATGA.................................................................................................................. 23 0 20 0.05 1 1 0 0
............................................................................CTATACTGGAGTCCCAAAGAAGA........................................................................................................................................................ 23 0 20 0.05 1 1 0 0
............TGAGCATCGAGAATCAAGCGGATTGT..................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0
.................ATCGAGAATCAAGCGGATTGT..................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0
.....................................................................................................................GCATGTCGTTCCACCAATGAGC................................................................................................................ 22 0 20 0.05 1 1 0 0
........CAGTTGAGCATCGAGAATCAAGCGGA......................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0
..................TCGAGAATCAAGCGGATTGT..................................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0

Anti-sense strand reads

CTTGTATGGTCAACTCGTAGCTCTTAGTTCGCCTAACAATGTGTACCTTCCATTACTATGATAAGCGTGAAATTCAGATATGACCTCAGGGTTTCTTCTACTTAAGGCAAAACGAAACGTACAGCAAGGTGGTTACTCGAGTGGAAAGAAGGAACGGTAAAAAATTTGGTGTTAGACATATTATAAAACTCGTCGTTAAGTTTTTACGCATAGGTTCGCACTTTACCTGAGTGCCTAGGTATAACTTCTAC
******************************************************************************************************************......(((((...(((((((((((.....)))))).))))).......))))).......**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
..TGTATGGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 26 0 20 2.50 50 36 14 0 0
...GTATGGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 25 0 20 0.95 19 12 7 0 0
.......GGTCAACTCGTAGCTCTTAGTTCGCCT......................................................................................................................................................................................................................... 27 0 20 0.70 14 14 0 0 0
..........................................................................................................GCAAAACGAAACGTACAGCAAGGTGGT...................................................................................................................... 27 0 20 0.35 7 3 4 0 0
...............CGTAGCTCTTAGTTCGCCTAACAAT................................................................................................................................................................................................................... 25 0 20 0.35 7 5 2 0 0
CTTGTATGGTCAACTCGTAGCTCT................................................................................................................................................................................................................................... 24 0 20 0.30 6 5 1 0 0
..TGTATGGTCAACTCGTAGCTCTTAGTT.............................................................................................................................................................................................................................. 27 0 20 0.30 6 5 0 1 0
............................TCGCCTAACAATGTGTACCTTCCAT...................................................................................................................................................................................................... 25 0 20 0.30 6 6 0 0 0
.................................................................................................................GAAACGTACAGCAAGGTGGTTACT.................................................................................................................. 24 0 20 0.30 6 0 6 0 0
....TATGGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 24 0 20 0.30 6 5 1 0 0
................................................................................................................CGAAACGTACAGCAAGGTGGTTAC................................................................................................................... 24 0 20 0.25 5 2 3 0 0
............................TCGCCTAACAATGTGTACCTTCCATTACT.................................................................................................................................................................................................. 29 0 20 0.25 5 5 0 0 0
.TTGTATGGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 27 0 20 0.25 5 4 1 0 0
...............CGTAGCTCTTAGTTCGCCTAACAATGT................................................................................................................................................................................................................. 27 0 20 0.20 4 2 2 0 0
......................CTTAGTTCGCCTAACAATGTGTACCT........................................................................................................................................................................................................... 26 0 20 0.20 4 3 1 0 0
.......GGTCAACTCGTAGCTCTTAGTTCGC........................................................................................................................................................................................................................... 25 0 20 0.20 4 2 2 0 0
CTTGTATGGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 28 0 20 0.20 4 2 2 0 0
.....ATGGTCAACTCGTAGCTCTTAGTTCGCCT......................................................................................................................................................................................................................... 29 0 20 0.20 4 4 0 0 0
...................................ACAATGTGTACCTTCCATTACTATGAT............................................................................................................................................................................................. 27 0 20 0.15 3 1 2 0 0
............................................................................GATATGACCTCAGGGTTTCTTCTACT..................................................................................................................................................... 26 0 20 0.15 3 2 1 0 0
..............................................................................................................AACGAAACGTACAGCAAGGTGGTTACT.................................................................................................................. 27 0 20 0.15 3 0 3 0 0
..TGTATGGTCAACTCGTAGCTCTTAG................................................................................................................................................................................................................................ 25 0 20 0.15 3 3 0 0 0
.........................................................................................................GGCAAAACGAAACGTACAGCAAGGT......................................................................................................................... 25 0 20 0.15 3 3 0 0 0
................................CTAACAATGTGTACCTTCCATTACTAT................................................................................................................................................................................................ 27 0 20 0.15 3 3 0 0 0
...................................................................................................................................................................................................GAAAGTTTTTAGGCATAGGTT................................... 21 3 8 0.13 1 0 0 1 0
............................................................................................................AAAACGAAACGTACAGCAAGGTGGTTAC................................................................................................................... 28 0 20 0.10 2 1 1 0 0
.....ATGGTCAACTCGTAGCTCTTAGTT.............................................................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0
...........................................................................AGATATGACCTCAGGGTTTCT........................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0
...................................................................................................................AACGTACAGCAAGGTGGTTACTCGAGT............................................................................................................. 27 0 20 0.10 2 1 1 0 0
.........................................TGTACCTTCCATTACTATGATAAGCGT....................................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0
..................AGCTCTTAGTTCGCCTAACAATGTGT............................................................................................................................................................................................................... 26 0 20 0.10 2 1 1 0 0
...........................................................................AGATATGACCTCAGGGTTTCTT.......................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0
.............................................................................................................AAACGAAACGTACAGCAAGGTGGTTACT.................................................................................................................. 28 0 20 0.10 2 0 2 0 0
.......................................TGTGTACCTTCCATTACTATGATAA........................................................................................................................................................................................... 25 0 20 0.10 2 1 1 0 0
........................TAGTTCGCCTAACAATGTGTACCTTCCAT...................................................................................................................................................................................................... 29 0 20 0.10 2 2 0 0 0
..........CAACTCGTAGCTCTTAGTTCGCCT......................................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0
...............................................................................................................ACGAAACGTACAGCAAGGTGGTTACT.................................................................................................................. 26 0 20 0.10 2 1 1 0 0
.....................................................................................................................CGTACAGCAAGGTGGTTACTCGAGT............................................................................................................. 25 0 20 0.10 2 0 2 0 0
...................................................................................................................................GTTACTCGAGTCTAAAGCAG.................................................................................................... 20 3 11 0.09 1 1 0 0 0
..........................................................................................................................................................................................AACTCGTCGCTCAGTTTTT.............................................. 19 2 11 0.09 1 1 0 0 0
.................TAGCTCTTAGTTCGCCTAACAATG.................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
......................................................................................................................GTACAGCAAGGTGGTTACTCGA............................................................................................................... 22 0 20 0.05 1 0 1 0 0
...................................................................................................................AACGTACAGCAAGGTGGTTACTCGA............................................................................................................... 25 0 20 0.05 1 1 0 0 0
..ATTATGGTCAACTCGTAGCTCTTAGTT.............................................................................................................................................................................................................................. 27 2 20 0.05 1 0 1 0 0
........GTCAACTCGTAGCTCTTAGTTCGCCT......................................................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0
..............................................................................TATGACCTCAGGGTTTCTTCTACT..................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
.............................................................................................................AAACGAAACGTACAGCAAGGTGGTTA.................................................................................................................... 26 0 20 0.05 1 1 0 0 0
..........................................................................................................................AGCAAGGTGGTTACTCGAGT............................................................................................................. 20 0 20 0.05 1 1 0 0 0
TGTGTATGGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 28 2 20 0.05 1 1 0 0 0
..........................................................................................................GCAAAACGAAACGTACAGCAAGGT......................................................................................................................... 24 0 20 0.05 1 1 0 0 0
....................................CAATGTGTACCTTCCATTACTATGAT............................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
..........................................................................................................GCAAAACGAAACGTACAGCAAGGTGGTT..................................................................................................................... 28 0 20 0.05 1 0 1 0 0
...........................................................................AGATATGACCTCAGGGTTTCTTCTAC...................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
...GTATGGTCAACTCGTAGCTCTTAGTT.............................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
........................................GTGTACCTTCCATTACTATGATAAGCG........................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0
..............................................CTTCCATTACTATGATAAGCG........................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 1
..TGTATTGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0
..TGTATGGTCAACTCGAAGCTCTTAGTT.............................................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0
.............................................................................................................AAACGAAACGTACAGCAAGGTGGTTAC................................................................................................................... 27 0 20 0.05 1 0 1 0 0
..................AGCTCTTAGTTCGCCTAACAATGT................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
........................................GTGTACCTTCCATTACTATGATAAGCGT....................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
...................................ACAATGTGTACCTTCGATTACTATGAT............................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0
............ACTCGTAGCTCTTAGTTCGCCTAACA..................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
......................................ATGTGTACCTTCCATTACTATGAT............................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
...............................................................................................................ACGAAACGTACAGGAAGGTGGTTAC................................................................................................................... 25 1 20 0.05 1 1 0 0 0
.......GGTCAACTCGTAGCTCTTAGTTCGCC.......................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
........................................GTGTACCTTCCATTAGTATGATAAGCG........................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0
.TTGTATGGTCAACTCGTAGCTCTT.................................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
.................................................................................................................GAAACGTACAGCAAGGTGGTTACTCG................................................................................................................ 26 0 20 0.05 1 0 1 0 0
..............................GCCTAACAATGTGTACCTTCCATTACTA................................................................................................................................................................................................. 28 0 20 0.05 1 0 1 0 0
..........CAACTCGTAGCTCTTAGTTCGCCTAACAA.................................................................................................................................................................................................................... 29 0 20 0.05 1 1 0 0 0
................GTAGCTCTTAGTTCGCCTA........................................................................................................................................................................................................................ 19 0 20 0.05 1 0 1 0 0
.................................................................................................................GAAACGTACAGCAAGGTGGTTAC................................................................................................................... 23 0 20 0.05 1 0 1 0 0
...GTATGGTCAACTCGTAGCTCTTAG................................................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0
.................................................................................................................GAAACGTACAGCAAGGTGGTT..................................................................................................................... 21 0 20 0.05 1 0 1 0 0
......TGGTCAACTCGTAGCTCTTAG................................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
............................TCGCCTAACAATGGGTACCTTCCAT...................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0
...............................................................................................................ACGAAACGTACAGCAAGGTGGTTAC................................................................................................................... 25 0 20 0.05 1 0 1 0 0
................................................................................................................CGAAACGTACAGCAAGGTGGTTACT.................................................................................................................. 25 0 20 0.05 1 0 0 1 0
................GTAGCTCTTAGTTCGCCTAACAATGT................................................................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0
.....ATGGTCAACTCGTAGCTCTTA................................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
..TGTATGGTCAACTCTTAGCTCTTAGTT.............................................................................................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0
....TATGGTCAACTCGTAGCTCTTAGTT.............................................................................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0
.......................................TGTGTACCTTCCATTACTATGAT............................................................................................................................................................................................. 23 0 20 0.05 1 0 1 0 0
............................................................................................................AAAACGAAACGTACAGCAAGGTGGTT..................................................................................................................... 26 0 20 0.05 1 0 1 0 0
............................TCGCCTAACAATGTGTACCTTCCATTAC................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0
...............CGTAGCTCTTAGTTCGCCTAACAATGTGT............................................................................................................................................................................................................... 29 0 20 0.05 1 1 0 0 0
.....ATGGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
..........CAACTCGTAGCTCTTAGTTCGCCTAAC...................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
...............CTTAGCTCTTAGTTCGCCTAACAATGT................................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0
..............................GCCTAACAATGTGTACCTTCCATTAC................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
ATTGTATGGTCAACTCGTAGCTCTTAGT............................................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0
..........................................................................CAGATATGACCTCAGGGTTTC............................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
..........................................................................................................GCAAAACGAAACGTACAGCAAGGTGG....................................................................................................................... 26 0 20 0.05 1 0 1 0 0
.............................CGCCTAACAATGTGTACCTTCCATTACT.................................................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0
..................AGCTCTTAGTTCGCCTAACAATG.................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0
..................................AACAATGTGTACCTTCCATTACTAT................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0
........................................................................................................................ACAGCAAGGTGGTTACTCGAGTGG........................................................................................................... 24 0 20 0.05 1 1 0 0 0
.......GGTCAACTCGTAGCTCTTAGTTCG............................................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0
...............CGTAGCTCTTAGTTCGCCTAACAA.................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
...............................................................................ATGACCTCAGGGTTTCTTCTACT..................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004928:28799-29049 - dwi_3055 GAACATACCAGTTGAGCATCGAGAATCAAGCGGATTGTTACACATGGAAGGTAATGATACTATTCGCAC---------------------------TTTAAGTCTATACTGGAGTCCCAAAGAAGATGAATTCCG-TTTTGCT--------------TTGCATG---------TCGTTCCACCAATGAGCTCACCTTTCTTCCTTGCCATTTTTTAAACCACAATCTGTATAATATTTTGAGCAGCAATTCAAAAATGCGTATCCAAGCGTGAAATGGACTCACGGATCCATATTGAAG-------------ATG
droVir3 scaffold_12736:582808-582951 - AAAGATACCTATAGAATTTCGCGAAACGAAGGGATTGTTGCACCTTGATGGCGAGGACACAAATCGTAC---------------------------GCTGGGTATTCATTGGAGCCCCGTGGAGGATGAATTTAG-ATTTCAT--------------TAAAATT---------TTGATCTAT------------------------------------------------------------------------------------------CAGTAGGCTTAC---C---------------------------
droMoj3 scaffold_6475:13630-13772 + TTTTGTT-------------------------------------------------------------------------------------------------------------------------------------------------TCGCCATT----TCTTTT-TTTCCATTTTCA------------TCTCTCACTTGCCATTTTTTAAGTTTCAGTCTATATGCAATTTTGAGAACGAATTCAAAAAATCGAATCCAACCATGTAGAGGACTTAT---GCCATATTTTAA-------TGCTTCATG
dp5 Unknown_group_539:4233-4336 + TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACTTTCCATTTTTTAAACCCCATTCTATATGATATTTTAAGCAGCAATTCAAAAATGCGTATCCAAGCATGAAGTGGACTTAT---CCCATAATGAAG-------------ACG
droPer2 scaffold_113:82098-82201 + TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACTTGCCATTTTTTAAACCCCATTCTATATGATATTTTAAGCAGCAATTCAAAAATGCGTATCCAAGCATGAAGTGGACTTAT---CCCATATTGAAG-------------ATG
droAna3 scaffold_13230:1815658-1815846 + TGAAGT------------------------------------------------------------------------------------------------CCCATATCT---TTCC----AAAACGAATTTTGAATTTGCTGTTTCCGTGCCGCC-------AGTTTG-ACTTTGCCTATA------------CCTTTGACATGCCACTTTTTTAGCTCGATTCTATATGATAAATTAAGTACAAATTCAAAGCAACGTATCCACGCATGAAGGGGGCTTAT---TCCATATTGATCCGTATTTGGCTTCATA
droBip1 scf7180000393690:4019-4196 + GTCTA-----------------------------------------------------------------------------------------CATGAAGTCCCATATCT---TTCC----AAAACGAATTTTGAATTTGCTGCTTTCGTGCCGCC-------AGTTTG-TCTTTGTCTATA------------CCTTTGACATGCCATTTTTTTAGCTCGATTCTATATGATAATTTAAGTACAAATTCAAAGCAACGTATCCACGCATGAAG-GGGCTTAT---TCCATATTGAT-----------------
droKik1 scf7180000302740:16005-16184 - CTTTAAA-----------------------------------------------------------------------------------------------CCTAGCCTC---TCCC----AAAACATGTGCTGAATTTCTTTCTTTCGGGCAGCT-------ATAGTT-TTTTTGTCCACCGAT---------GTTGTCACTCGCCATTTTTTTAAAGTTAATTTATAACTGGCATGCAAGACAAATTCAAAACATCTTATCCAGCTATGAAGGGGACTAAT---TCCGTGTTTTAA-------------ATT
droFic1 scf7180000453721:6051-6240 - CTGATCGA--------------------------------------------------------------------------------------CCCTTAAGCCTAGCCTC---TCCC----AAAACATACGCTGAATTTCCTTTTTCCGATCTGCA-------ATCGTTTTTTTTGTCCACAGAT---------GTTGTCACTCGCCATTTCTGAACAGATAACTTATAACCGACGTGTAATACAAATTCAAAACATCTTATCCAGCTATGAAGCGGACTTAA---CCCGTGTTTTAA-------------ATG
droEle1 scf7180000490684:16736-16888 - TTCCATTCTGCTTGGGC---------------------------------------------------------------------CCATTTCCCATTACGTT-----------------------------------------------------C-------CTTTCA-ATTTTATCA----------------TCACTATATGCCATTTCTTAAATTCAATTTTATATGAAATGTTCAAATCAAATTCTAAAAACCGGATCTAGGCATGCAATTGACTTAC---TCCAAACTGCAC-------------AGC
droRho1 scf7180000772404:9490-9683 + TACTATTC---------------------------------------------------------CCACTTCCATTTTGTTTGGGAATGCTTA-TATGTAGACCCATTTTG---GCCC----ACATCA--TTTCACTGTGGC--------------A-------TGTTTA-ATGTGGCC----------------TGTTTAATGTGCCACTTTTGAAGTTTAAGACTACAGGATACGTTCAACACAAATTTTAAAAATCGAATCCAGGTATGCAATGGACTTGC---TCCATATTTTAG-------------AGT
droBia1 scf7180000301169:17752-17930 - GTCTA-----------------------------------------------------------------------------------------CATGAAGTCCCATACCT---TTCC----AAAACGAATTTAGAATTTGCTGTTTTCGTGCCGCC-------AGTTTG-TCTTTATCTATA------------CCTTTGATATGCCACTTTTTTAGCTCGATTCTATATGATAATTTAATTACAAATTCAAAGAAACGTATCAACGCATGAAGGGGGCTTTT---TCCATATTGAT-----------------
droTak1 scf7180000412362:230-408 - GTCTA-----------------------------------------------------------------------------------------CATGAAGTCCCATATCT---TTCC----AAAACGAATTTTGAATTTGCTGTTTCCGTGCCGCC-------AGTTTG-TCTTTGTCTACT------------CCTTTGACATGCCACTTTTTTAGCTCAATCCTGTATGATAATTTAAGTACAAATTCAAAGCAACGTATCCACGCATGAAGGGGGCTTAT---TCCATATTGGT-----------------
droEug1 scf7180000409047:12176-12288 + TCACTTTCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCTTGCTTGCCACTTTTTAAACTTCAATCTATAAGATATTTTTAGGAGTAATTCAAAAACACGTATCCACGTGTGTAGTGGACTTAT---TCCATACTGAAG-------------GTG
dm3 chr3LHet:2233963-2234118 - AATTT---------------------------------------------------------------------------------------------------------------------------GTTTTTGTATAAAATGCTTTCGTTCCACT-------AATTTA-GGTTTATCAAAG------------TCCTTTACATGCCAAGTTTTAAGATCAGCTCTGTATGCAAGTTTTAAAACAAATTCAAAGAAGCGAATCCACGCATGTAAAGGGCTTAT---TCCAAACTGAAG-------------AGT
droSim2 node_2467:97-220 + TC------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-ACCTTGTCCTCT------------CCTTTTATATGCCACTTTTTTATCTCAGCTCTGTATGATACGTTTAAAACAAATTCAAAAAAACGGATCCAGGCATGTAGTGGACTTAC---CCCAAATTGTAA-------------AGC
droSec2 scaffold_497:11670-11791 + TC------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-ACCTTGTCCTCT------------CCTTTTATATGCCACTTTTTTATCTCAGCTCTGTATGATACGTTTAAAACAAATTCAAAAAAACGGATCCAGGCATGTAGTGGACTTAC---CCCAAATTGTAA-------------A--
droYak3 v2_chrUn_3591:187-344 - AATTCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTTTGCAGT-------ACATTG-AGCTTATGTTCTGCT---------GATCTCGCCTGCCACATTTTTATTTCCAACTTGTATGAAAGGTGCATTATGTACTCAAAAAAGCGTATGTACGAATGAAGTGGCGATAA---GCCGAATTCAAA-------------ATA
droEre2 scaffold_4895:270956-271091 - TTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------CGTATACTC-------ATTTTA-ACCTTGTCCTCT------------CCTTTTATATGCCACTTTTTCAACTCA--TTCATATGATACGTTTAAAACAAATTCAAAAAACCGGATCCAAGCATGTAATGGACTTAC---CCCAAATTGTAA-------------AGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GAACATACCAGTTGAGCATCGAGAATCAAGCGGATTGTTACACATGGAAGGTAATGATACTATTCGCAC---------------------------TTTAAGTCTATACTGGAGTCCCAAAGAAGATGAATTCCG-TTTTGCT--------------TTGCATG---------TCGTTCCACCAATGAGCTCACCTTTCTTCCTTGCCATTTTTTAAACCACAATCTGTATAATATTTTGAGCAGCAATTCAAAAATGCGTATCCAAGCGTGAAATGGACTCACGGATCCATATTGAAG-------------ATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................TCGAGAATCAAGCGGATTGTTACAC................................................................................................................................................................................................................................................................................25200.15330000
..................TCGAGAATCAAGCGGATTGTTACACA...............................................................................................................................................................................................................................................................................26200.15303000
..............AGCATCGAGAATCAAGCGGATTGT.....................................................................................................................................................................................................................................................................................24200.15303000
..................TCGAGAATCAAGCGGATTGTTAC..................................................................................................................................................................................................................................................................................23200.15303000
..................TCGAGAATCAAGCGGATTGTTACA.................................................................................................................................................................................................................................................................................24200.15303000
...............GCATCGAGAATCAAGCGGATTGTT....................................................................................................................................................................................................................................................................................24200.10202000
..............AGCATCGAGAATCAAGCGGATTG......................................................................................................................................................................................................................................................................................23200.10202000
...................CGAGAATCAAGCGGATTGTTACACA...............................................................................................................................................................................................................................................................................25200.10202000
...................CGAGAATCAAGCGGATTGTTACACATG.............................................................................................................................................................................................................................................................................27200.05101000
...CATACCAGTTGAGCATCGAGA...................................................................................................................................................................................................................................................................................................21200.05101000
..............AGCATCGAGAATCAAGCGGATTGTT....................................................................................................................................................................................................................................................................................25200.05101000
...............GCATCGAGAATCAAGCGGATTGTTAC..................................................................................................................................................................................................................................................................................26200.05110000
..............................................................................................................................................T--------------TTGCATG---------TCGTTCCACCAATGA...............................................................................................................................23200.05101000
.......................................................................................................CTATACTGGAGTCCCAAAGAAGA.............................................................................................................................................................................................23200.05101000
............TGAGCATCGAGAATCAAGCGGATTGT.....................................................................................................................................................................................................................................................................................26200.05101000
.................ATCGAGAATCAAGCGGATTGT.....................................................................................................................................................................................................................................................................................21200.05110000
...............................................................................................................................................................GCATG---------TCGTTCCACCAATGAGC.............................................................................................................................22200.05101000
........CAGTTGAGCATCGAGAATCAAGCGGA.........................................................................................................................................................................................................................................................................................26200.05101000
..................TCGAGAATCAAGCGGATTGT.....................................................................................................................................................................................................................................................................................20200.05110000
droVir3
AAAGATACCTATAGAATTTCGCGAAACGAAGGGATTGTTGCACCTTGATGGCGAGGACACAAATCGTAC---------------------------GCTGGGTATTCATTGGAGCCCCGTGGAGGATGAATTTAG-ATTTCAT--------------TAAAATT---------TTGATCTAT------------------------------------------------------------------------------------------CAGTAGGCTTAC---C---------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................GATGGCGAGGACACAAATCGT........................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
TTTTGTT-------------------------------------------------------------------------------------------------------------------------------------------------TCGCCATT----TCTTTT-TTTCCATTTTCA------------TCTCTCACTTGCCATTTTTTAAGTTTCAGTCTATATGCAATTTTGAGAACGAATTCAAAAAATCGAATCCAACCATGTAGAGGACTTAT---GCCATATTTTAA-------TGCTTCATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................TTCAGTCTATATGCAATTTTGAGAAC......................................................................2667.004224100170
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGACTT.................................2566.33383400031
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGACTTA................................2665.67343100021
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAAG.................................................................................................2775.29373300040
...........................................................................................................................................................................................................................TTCAGTCTATATGCAATTTTGAGAACGA....................................................................2862.83171600001
...........................................................................................................................................................................................................................TTCAGTCTATATGCAATTTTGAGA........................................................................2462.67161300030
...........................................................................................................................................................................................................................TTCAGTCTATATGCAATTTTGAGAA.......................................................................2562.33141010030
........................................................................................................................................................................................................................................................TTCAAAAAATCGAATCCAACCATGTAG........................................2762.17131010020
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAAGT................................................................................................2871.86131200010
...........................................................................................................................................................................TTTCCATTTTCA------------TCTCTCACTTGCC...........................................................................................................25101.40142000120
...........................................................................................................................................................................................................................TTCAGTCTATATGCAATTTTGAGAACG.....................................................................2761.338800000
..............................................................................................................................................................................................................................................................AAATCGAATCCAACCATGTAGAGGAC...................................2661.338300050
...........................................................................................................................................................................................................................TTCAGTCTATATGCAATTTTGAGAACGAA...................................................................2961.338600011
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGACT..................................2461.177400030
..................................................................................................................................................................................................................................................................CGAATCCAACCATGTAGAGGACTTA................................2560.835500000
..........................................................................................................................................................................................................................TTTCAGTCTATATGCAATTTTGAGAAC......................................................................2760.835300020
........................................................................................................................................................................................................................................................................................TTAT---GCCATATTTTAA-------TGCTTCATG2560.835500000
....................................................................................................................................................................................TCA------------TCTCTCACTTGCCATTTTTTAAG.................................................................................................2670.715500000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTT.....................................................................................................23100.707700000
...........................................................................................................................................................................................................................................................................CCATGTAGAGGACTTAT---GCCATATT....................2560.674200020
..........................................................................................................................................................................................................................TTTCAGTCTATATGCAATTTTGAGA........................................................................2560.674400000
...........................................................................................................................................................................TTTCCATTTTCA------------TCTCTCACTTGCCA..........................................................................................................26100.606500010
.............................................................................................................................................................................................................................CAGTCTATATGCAATTTTGAGAACGA....................................................................2660.503200010
...........................................................................................................................................................................................................................TTCAGTCTATATGCAATTTTGAG.........................................................................2360.503300000
...........................................................................................................................................................................TTTCCATTTTCA------------TCTCTCACTTGCCATT........................................................................................................28100.505100040
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGAC...................................2360.503200010
..............................................................................................................................................................TT----TCTTTT-TTTCCATTTTCA------------TCTCTCAC................................................................................................................2870.433300000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAAGTT...............................................................................................2970.433200010
........................................................................................................................................................................TT-TTTCCATTTTCA------------TCTCTCACTTGCC...........................................................................................................27100.404100030
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTA...................................................................................................2580.383300000
........................................................................................................................................................................................................................................................TTCAAAAAATCGAATCCAACCATGTAGAG......................................2960.332200000
............................................................................................................................................................................................................................TCAGTCTATATGCAATTTTGAGAACGAA...................................................................2860.332200000
................................................................................................................................................................................................................................TCTATATGCAATTTTGAGAACGAAT..................................................................2560.332200000
......................................................................................................................................................................................................................................................................TCCAACCATGTAGAGGACTTAT---GCCA........................2660.332200000
............................................................................................................................................................................................................................TCAGTCTATATGCAATTTTGAGAACG.....................................................................2660.332200000
..........................................................................................................................................................................................................................................................CAAAAAATCGAATCCAACCATGTAG........................................2560.332200000
........................................................................................................................................................................................................................................................TTCAAAAAATCGAATCCAACCATGTAGA.......................................2860.332100010
..........................................................................................................................................................................................................................................................................ACCATGTAGAGGACTTAT---GCCATATTT...................2760.332100010
........................................................................................................................................................................................................................................................................CAACCATGTAGAGGACTTAT---GCCATA......................2660.332000020
................................................................................................................................................................................................................................................................ATCGAATCCAACCATGTAGAGGACTT.................................2660.332200000
...........................................................................................................................................................................................................................................................................CCATGTAGAGGACTTAT---GCCATATTT...................2660.332200000
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGACTTAA---............................2760.332200000
......................................................................................................................................................................................................................................................................TCCAACCATGTAGAGGACTTAT---GCCATA......................2860.332100010
.......................................................................................................................................................................TTT-TTTCCATTTTCA------------TCTCTCACT...............................................................................................................24100.303000030
.........................................................................................................................................................................T-TTTCCATTTTCA------------TCTCTCACTTGCC...........................................................................................................26100.303200010
...........................................................................................................................................................................TTTCCATTTTCA------------TCTCTCACTTGCCAT.........................................................................................................27100.303100020
........................................................................................................................................................................TT-TTTCCATTTTCA------------TCTCTCACTTGC............................................................................................................26100.303200010
....................................................................................................................................................................................TCA------------TCTCTCACTTGCCATTTTTTAAGT................................................................................................2770.292200000
...............................................................................................................................................................................................................................................GAGAACGAATTCAAAAAATCGAATC...................................................2540.251000010
..............................................................................................................................................................................................................................................TGAGAACGAATTCAAAAAATCGAAT....................................................2540.251000010
.......................................................................................................................................................................TTT-TTTCCATTTTCA------------TCTCTCACTTGCC...........................................................................................................28100.202100010
...........................................................................................................................................................................TTTCCATTTTCA------------TCTCTCACTTG.............................................................................................................23100.202200000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTT......................................................................................................22100.202000020
.........................................................................................................................................................................T-TTTCCATTTTCA------------TCTCTCACTTGCCAT.........................................................................................................28100.202100010
...........................................................................................................................................................................TTTCCATTTTCA------------TCTCTCACTTGC............................................................................................................24100.202200000
.................................................................................................................................................................................................................................CTATATGCAATTTTGAGAACGAA...................................................................2360.171100000
.................................................................................................................................................................................................................................CTATATGCAATTTTGAGAACGAAT..................................................................2460.171000010
..................................................................................................................................................................................................................................................................CGAATCCAACCATGTAGAGGA....................................2160.171000010
.........................................................................................................................................................................................................................................................................AACCATGTAGAGGACTTAT---GCCATAT.....................2660.171100000
............................................................................................................................................................................................................................TCAGTCTATATGCAATTTTGAGAACGA....................................................................2760.171100000
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGACTTAT---G...........................2860.171100000
........................................................................................................................................................................................................................................................TTCAAAAAATCGAATCCAACCATGT..........................................2560.171000010
........................................................................................................................................................................................................................................................................CAACCATGTAGAGGACTT.................................1860.171100000
................................................................................................................................................................................................................................................................ATCGAATCCAACCATGTAGAGGAC...................................2460.171000010
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGACC..................................2460.171000010
.............................................................................................................................................................................................................................................................................ATGTAGAGGACTTAT---GCCATATTT...................2460.171100000
.....................................................................................................................................................................................................................................................................ATCCAACCATGTAGAGGACTTAT---GCC.........................2660.171000010
..............................................................................................................................................................................................................................................................AAATCGAATCCAACCATGTAGAGGACT..................................2760.171100000
............................................................................................................................................................................................................................TCAGTCTATATGCAATTTTGAGAAC......................................................................2560.171100000
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGACTTAT---............................2760.171000010
............................................................................................................................................................................................................................TCAGTCTATATGCAATTTTGAGA........................................................................2360.171100000
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAGGACTTAA---AA..........................2960.171100000
..............................................................................................................................................................................................................................................................AAATCGAATCCAACCATGTAGAGG.....................................2460.171000010
.............................................................................................................................................................................................................................CAGTCTATATGCAATTTTGAGAACGAA...................................................................2760.171100000
....................................................................................................................................................................................................................................................................AATCCAACCATGTAGAGG.....................................1860.171000010
.............................................................................................................................................................................................................................CAGTCTATATGCAATTTTGAGAACG.....................................................................2560.171100000
.............................................................................................................................................................................................................................CAGTCTATATGCAATTTTGAGAACGAAT..................................................................2860.171100000
.........................................................................................................................................................................................................................................................................................TAT---GCCATATTTTAA-------TGCTTCATG2460.171100000
..........................................................................................................................................................................................................................TTTCAGTCTATATGCAATTTTGAGAA.......................................................................2660.171000010
...........................................................................................................................................................................................................................................................................CCATGTAGAGGACTTAT---GCC.........................2060.171010000
...................................................................................................................................................................................................................TTTTAAGTTTCAGTCTATATGCAATT..............................................................................2660.171000010
................................................................................................................................................................................................................................................................................TAGAGGACTTAT---GCCATATTTTAA-------TGC......2760.171100000
............................................................................................................................................................................................................................................................................CATGTAGAGGACTTAT---GCCATATT....................2460.171000010
................................................................................................................................................................................................................................TCTATATGCAATTTTGAGAACGAAC..................................................................2560.171000010
...........................................................................................................................................................................................................................................................................CCATGTAGAGGACTTAT---GCCATAC.....................2460.171000010
............................................................................................................................................................................................................................TCAGTCTATATGCAATTTT............................................................................1960.171100000
................................................................................................................................................................................................................................TCTATATGCAATTTTGAGAACGAA...................................................................2460.171100000
.................................................................................................................................................................................................................................................................TCGAATCCAACCATGTAGAG......................................2060.171100000
..................................................................................................................................................................................................................................................................CGAATCCAACCATGTAGAGGACTTAT---GCC.........................2960.171000010
.............................................................................................................................................................................................................................................................AAAATCGAATCCAACCATGTAGAGGAC...................................2760.171100000
......................................................................................................................................................................................................................................................................TCCAACCATGTAGAGGACTT.................................2060.171100000
..........................................................................................................................................................................................................................................................................ACCATGTAGAGGACTTAT---GCCATATT....................2660.171000010
............................................................................................................................................................................................................................TCAGTCTATATGCAATTTTGAGAACGAAT..................................................................2960.171100000
...............................................................................................................................................................................................................................................................AATCGAATCCAACCATGTAGAGG.....................................2360.171100000
................................................................................................................................................................................................................................................................ATCGAATCCAACCATGTAGAGGACTTA................................2760.171100000
................................................................................................................................................................................................................................................................ATCGAATCCAACCATGTAGAGGACT..................................2560.171100000
.........................................................................................................................................................................................................................................................TCAAAAAATCGAATCCAACCATGTAG........................................2660.171100000
......................................................................................................................................................................................................................................................................TCCAACCATGTAGAGGACTTAT---GCC.........................2560.171100000
..................................................................................................................................................................................................................................TATATGCAATTTTGAGAACGAAT..................................................................2360.171100000
........................................................................................................................................................................................................................................................TTCAAAAAATCGAATCCAACCATG...........................................2460.171100000
...............................................................................................................................................................................................................................................................AATCGAATCCAACCATGTAGAGGAC...................................2560.171100000
........................................................................................................................................................................................................................................................TTCAAAAAATCGAATCCAACCATGTA.........................................2660.171100000
...............................................................................................................................................................................................................CATTTTTTAAGTTTCAGTCTATATGC..................................................................................2660.171100000
...............................................................................................................................................................T----TCTTTT-TTTCCATTTTCA------------TCTCTCAC................................................................................................................2770.141000010
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAAGA................................................................................................2870.141100000
....................................................................................................................................................................TCTTTT-TTTCCATTTTCA------------TCTCTCA.................................................................................................................2570.141100000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAAGC................................................................................................2870.141100000
..............................................................................................................................................................TT----TCTTTT-TTTCCATTTTCA------------TCTCT...................................................................................................................2570.141000010
....................................................................................................................................................................TCTTTT-TTTCCATTTTCA------------TCTCTCACT...............................................................................................................2770.141100000
...............................................................................................................................................................T----TCTTTT-TTTCCATTTTCA------------TCTCTCACT...............................................................................................................2870.141100000
..............................................................................................................................................................TT----TCTTTT-TTTCCATTTTCA------------TC......................................................................................................................2270.141100000
..............................................................................................................................................................TT----TCTTTT-TTTCCATTTTCA------------TCTCTCACT...............................................................................................................2970.141000010
...................................................................................................................................................................................................TCTCTCACTTGCCATTTTTTAAG.................................................................................................2370.141100000
......................................................................................................................................................................TTTT-TTTCCATTTTCA------------TCTCTCAC................................................................................................................2470.141100000
.....................................................................................................................................................................CTTTT-TTTCCATTTTCA------------TCTCTCACT...............................................................................................................2670.141000010
...............................................................................................................................................................T----TCTTTT-TTTCCATTTTCA------------TCTCTCACC...............................................................................................................2870.141000010
....................................................................................................................................................................TCTTTT-TTTCCATTTTCA------------TCTCTCACC...............................................................................................................2770.141000010
....................................................................................................................................................................TCTTTT-TTTCCATTTTCA------------TCTCTCAC................................................................................................................2670.141100000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTT....................................................................................................2480.131100000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAAGTC...............................................................................................2980.131100000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAAAAA...............................................................................................2980.131100000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAA..................................................................................................2680.131100000
....................................................................................................................................................................................TCA------------TCTCTCACTTGCCATTTTTT....................................................................................................2380.131100000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATTTTTTAAAA................................................................................................2880.131100000
....................................................................................................................................................................................TCA------------TCTCTCACTTGCCATTTTT.....................................................................................................22100.101100000
.......................................................................................................................................................................TTT-TTTCCATTTTCA------------TCTCTCACTTG.............................................................................................................26100.101100000
.............................................................................................................................................................................TCCATTTTCA------------TCTCTCACTTGCCATTT.......................................................................................................27100.101100000
............................................................................................................................................................................TTCCATTTTCA------------TCTCTCACTTGCCATTT.......................................................................................................28100.101100000
..............................................................................................................................................................................CCATTTTCA------------TCTCTCACTTGCCATC........................................................................................................25100.101100000
..............................................................................................................................................................................CCATTTTCA------------TCTCTCACTTGCCATT........................................................................................................25100.101100000
.................................................................................................................................................................................TTTTCA------------TCTCTCACTTGCCAT.........................................................................................................21100.101100000
.........................................................................................................................................................................T-TTTCCATTTTCA------------TCTCTCACTTG.............................................................................................................24100.101100000
...............................................................................................................................................................................CATTTTCA------------TCTCTCACTTGCCA..........................................................................................................22100.101100000
........................................................................................................................................................................TT-TTTCCATTTTCA------------TCTCTCACTTGCCAT.........................................................................................................29100.101000010
................................................................................................................................................................................ATTTTCA------------TCTCTCACTTGCCATTTTT.....................................................................................................26100.101100000
.............................................................................................................................................................................TCCATTTTCA------------TCTCTCACTTGC............................................................................................................22100.101000010
.........................................................................................................................................................................T-TTTCCATTTTCA------------TCTCTCACC...............................................................................................................22100.101000010
........................................................................................................................................................................TT-TTTCCATTTTCA------------TCTCTCACTTG.............................................................................................................25100.101100000
...................................................................................................................................................................................TTCA------------TCTCTCACTTGCCATT........................................................................................................20100.101100000
.........................................................................................................................................................................T-TTTCCATTTTCA------------TCTCTCACTTGCCA..........................................................................................................27100.101100000
.......................................................................................................................................................................TTT-TTTCCATTTTCA------------TCTCTCACTTGCCA..........................................................................................................29100.101100000
................................................................................................................................................................................ATTTTCA------------TCTCTCACTTGCCATT........................................................................................................23100.101000010
.......................................................................................................................................................................TTT-TTTCCATTTTCA------------TCTCTCACTT..............................................................................................................25100.101100000
..............................................................................................................................................................................CCATTTTCA------------TCTCTCACTTGCC...........................................................................................................22100.101000010
.............................................................................................................................................................................TCCATTTTCA------------TCTCTCACTTGCC...........................................................................................................23100.101000010
.......................................................................................................................................................................TTT-TTTCCATTTTCA------------TCTCTCACTTGC............................................................................................................27100.101100000
dp5
TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCACTTTCCATTTTTTAAACCCCATTCTATATGATATTTTAAGCAGCAATTCAAAAATGCGTATCCAAGCATGAAGTGGACTTAT---CCCATAATGAAG-------------ACGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................TATGATATTTTAAGCAGCAATTCAAAAA...........................................................2824.0080200001500
...............................................................................................................................................................................................................................TTCTATATGATATTTTAAGCAGCAAT..................................................................2623.5070110000500
...............................................................................................................................................................................................................................TTCTATATGATATTTTAAGCAGCAATT.................................................................2723.5070310000300
...............................................................................................................................................................................................................................TTCTATATGATATTTTAAGCAGCAA...................................................................2523.5070000000610
................................................................................................................................................................................................................................................................TGCGTATCCAAGCATGAAGTGG.....................................2212.0020200000000
................................................................................................................................................................................................................................TCTATATGATATTTTAAGCAGCAAT..................................................................2522.0040100000300
................................................................................................................................................................................................................................................................TGCGTATCCAAGCATGAAGTGGACT..................................2512.0020200000000
................................................................................................................................................................................................................................................................TGCGTATCCAAGCATGAAGTG......................................2112.0020200000000
........................................................................................................................................................................................................................................................................CAAGCATGAAGTGGACTTAT---CCCAT.......................2521.5030100000200
.............................................................................................................................................................................................................................CATTCTATATGATATTTTAAGCAGCAA...................................................................2721.5030000000300
........................................................................................................................................................................................................................................................................CAAGCATGAAGTGGACTTAT---CCCATA......................2621.0020200000000
.............................................................................................................................................................................................................................................TTAAGCAGCAATTCAAAAATGCGTATC...................................................2711.0010010000000
................................................................................................................................................................................................................................................................TGCGTATCCAAGCATGAAGTGGACTT.................................2611.0010100000000
....................................................................................................................................................................................................................................................................TATCCAAGCATGAAGTGGACTTAT---CCCA........................2811.0010100000000
....................................................................................................................................................................................................................................TATGATATTTTAAGCAGCAATTCAA..............................................................2521.0020100000100
.....................................................................................................................................................................................................................................................CAATTCAAAAATGCGTATCCAAGC..............................................2411.0010100000000
........................................................................................................................................................................................................................................................................CAAGCATGAAGTGGACTTAT---CCCA........................2421.0020200000000
......................................................................................................................................................................................................................................................................TCCAAGCATGAAGTGGACTTAT---CCCA........................2611.0010100000000
......................................................................................................................................................................................................................................................................TCCAAGCATGAAGTGGACTTA................................2111.0010000000100
......................................................................................................................................................................................................................................................................TCCAAGCATGAAGTGGACTTAT---CCCAT.......................2711.0010100000000
...................................................................................................................................................................................................................................ATATGATATTTTAAGCAGCAATT.................................................................2321.0020000000200
.................................................................................................................................................................................................................................................................GCGTATCCAAGCATGAAGTGGACTTAA---............................2711.0010100000000
...................................................................................................................................................................................................................................ATATGATATTTTAAGCAGCAATTC................................................................2421.0020000000200
..............................................................................................................................................................................................................................................................................TGAAGTGGACTTAT---CCCATAATGAAG-------------A..2720.5010000000100
.............................................................................................................................................................................................................................................................................ATGAAGTGGACTTAT---CCCATAATG...................2420.5010100000000
...................................................................................................................................................................................................................................................................................TGGACTTAT---CCCATAATGAAG-------------ACG2420.5010000000100
............................................................................................................................................................................................................................CCATTCTATATGATATTTTAAGCA.......................................................................2420.5010000000100
......................................................................................................................................................................................................................TAAACCCCATTCTATATGATATC..............................................................................2320.5010010000000
.........................................................................................................................................................................................................................................................................AAGCATGAAGTGGACTTAT---CCCA........................2320.5010100000000
...........................................................................................................................................................................................................................................................................GCATGAAGTGGACTTAT---CCCATAA.....................2420.5010100000000
...........................................................................................................................................................................................................................................TTTTAAGCAGCAATTCAAAAATGCG.......................................................2520.5010100000000
......................................................................................................................................................................................................................................TGATATTTTAAGCAGCAA...................................................................1820.5010000100000
............................................................................................................................................................................................................................CCATTCTATATGATATTTTAAG.........................................................................2220.5010000000100
droPer2
TTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTACTTGCCATTTTTTAAACCCCATTCTATATGATATTTTAAGCAGCAATTCAAAAATGCGTATCCAAGCATGAAGTGGACTTAT---CCCATATTGAAG-------------ATGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................TTAAACCCCATTCTATATGATATTT.............................................................................2552.20110100100
..........................................................................................................................................................................................................................................................................AGCATGAAGTGGACTTAT---CCCATAT.....................2522.004031000
..........................................................................................................................................................................................................................................................................AGCATGAAGTGGACTTAT---CCCATA......................2442.008071000
.....................................................................................................................................................................................................................TTAAACCCCATTCTATATGATATT..............................................................................2450.603030000
........................................................................................................................................................................................................................................................................CAAGCATGAAGTGGACTTAT---CCCATAT.....................2720.501010000
................................................................................................................................................................................................................................................................TGCGTATCCAAGCATGAAGTGGACT..................................2540.502020000
...........................................................................................................................................................................................................................................................................GCATGAAGTGGACTTAT---CCCATA......................2340.502020000
..............................................................................................................................................................................................................................................TAAGCAGCAATTCAAAAATGCG.......................................................2240.502020000
........................................................................................................................................................................................................................................................................CAAGCATGAAGTGGACTTAT---CCCAT.......................2540.502020000
.........................................................................................................................................................................................................................................................................AAGCATGAAGTGGACTTAT---CCCATAT.....................2620.501010000
..........................................................................................................................................................................................................................................................................AGCATGAAGTGGACTTAT---CCCA........................2240.502020000
.........................................................................................................................................................................................................................................................................AAGCATGAAGTGGACTTAT---CCCA........................2340.502020000
..........................................................................................................................................................................................................................................................................AGCATGAAGTGGACTTAT---CCCATATTG...................2720.501010000
..............................................................................................................................................................................................................................................................................TGAAGTGGACTTAT---CCCATA......................2040.251010000
........................................................................................................................................................................................................................................................................CAAGCATGAAGTGGACTTAT---CCCA........................2440.251010000
..........................................................................................................................................................................................................................................................................AGCATGAAGTGGACTTAT---CCCAT.......................2340.251010000
.....................................................................................................................................................................................................................TTAAACCCCATTCTATATGATAT...............................................................................2350.201010000
droAna3
TGAAGT------------------------------------------------------------------------------------------------CCCATATCT---TTCC----AAAACGAATTTTGAATTTGCTGTTTCCGTGCCGCC-------AGTTTG-ACTTTGCCTATA------------CCTTTGACATGCCACTTTTTTAGCTCGATTCTATATGATAAATTAAGTACAAATTCAAAGCAACGTATCCACGCATGAAGGGGGCTTAT---TCCATATTGATCCGTATTTGGCTTCATASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................GCAACGTATCCACGCATGAAGGGGG....................................2523.507151000
...................................................................................................................................................................................TATA------------CCTTTGACATGCCACTTTTTTAGC................................................................................................2832.678160001
...................................................................................................................................................................................TATA------------CCTTTGACATGCCACTTTTTTAG.................................................................................................2732.337070000
..............................................................................................................................................................................................................................................................GCAACGTATCCACGCATGAAGGGGGC...................................2622.004220000
................................................................................................................................................................................................................................................................AACGTATCCACGCATGAAGGGGG....................................2322.004130000
..............................................................................................................................................................................................................................................................GCAACGTATCCACGCATGAAGGGG.....................................2422.004040000
..........................................................................................................................................................................................................................................................CAAAGCAACGTATCCACGCATGAAGG.......................................2621.503210000
.........................................................................................................................................................................................................................................................TCAAAGCAACGTATCCACGCATGAAGGG......................................2821.503111000
.............................................................................................................................................................................................................................................................AGCAACGTATCCACGCATGAAGGGGGC...................................2721.503120000
............................................................................................................................................................................................................................................................AAGCAACGTATCCACGCATGAAGGGG.....................................2621.503120000
..............................................................................................................................................................................................................................................................GCAACGTATCCACGCATGAAGGGGGCT..................................2721.503120000
.........................................................................................................................................................................................................................................................................................TAT---TCCATATTGATCCGTATTTGGCT.....2631.334220000
.............................................................................................................................................................................................................................................................AGCAACGTATCCACGCATGAAGGGG.....................................2521.002020000
..............................................................................................................................................................................................................................................................GCAACGTATCCACGCATGAAGGG......................................2321.002010010
.................................................................................................................................................TTCCGTGCCGCC-------AGTTTG-ACTTTGCC........................................................................................................................................2611.001100000
................................................................................................................................................................................................................................................................AACGTATCCACGCATGAAGGGG.....................................2221.002020000
..............................................................................................................................................................................................................................................................GCAACGTATCCACGCATGAAGG.......................................2221.002020000
................................................................................................................................................................................................................................................................AACGTATCCACGCATGAAGGGGGC...................................2421.002011000
..........................................................................................................TATCT---TTCC----AAAACGAATTTTGAATT................................................................................................................................................................................2611.001010000
.........................................................................................................................................................................................................................................................................................TAT---TCCATATTGATCCGTATTTGGCTT....2731.003120000
................................................................................................................................................................................................................................................................AACGTATCCACGCATGAAGGGGGCT..................................2521.002010010
........................................................................................................................................................................................................................................................TTCAAAGCAACGTATCCACGCATGAAGG.......................................2821.002110000
.........................................................................................................................................................................................................................................................................................TAT---TCCATATTGATCCGTATTTGGC......2531.003120000
.........................................................................................................................................................................................................................................................................................TAT---TCCATATTGATCCGTATTTGG.......2430.672200000
......................................................................................................................................................................................................................................................................TCCACGCATGAAGGGGGCTTAT---TCC.........................2530.672020000
..................................................................................................................................................................................CTATA------------CCTTTGACATGCCACTTTTTTAG.................................................................................................2830.672020000
........................................................................................................................................................................................................................................................................CACGCATGAAGGGGGCTTAT---TCCATA......................2630.672200000
......................................................................................................................................................................................................................................................................TCCACGCATGAAGGGGGCTTAT---TCCATA......................2830.672010100
...............................................................................................................................................................................................................................................................CAACGTATCCACGCATGAAGGGC.....................................2320.501010000
...........................................................................................................................................................................................................................................................AAAGCAACGTATCCACGCATGAAGGG......................................2620.501100000
...........................................................................................................................................................................................................................................................AAAGCAACGTATCCACGCATGAAGG.......................................2520.501010000
..................................................................................................................................................................................................................................................................CGTATCCACGCATGAAGGGGGCTTA................................2520.501100000
....................................................................................................................................................................................................................................................................TATCCACGCATGAAGGGGGCTTAT---T...........................2520.501100000
...............................................................................................................................................................................................................................................................CAACGTATCCACGCATGAAGGGG.....................................2320.501100000
............................................................................................................................................................................................................................................................AAGCAACGTATCCACGCATGAAGGG......................................2520.501001000
........................................................................................................................................................................................................................................................TTCAAAGCAACGTATCCACGCATGAAGGG......................................2920.501100000
..............................................................................................................................................................................................................................................................GCAACGTATCCACGCATGAAGGGGGCTT.................................2820.501100000
...............................................................................................................................................................................................................................................................CAACGTATCCACGCATGAAGG.......................................2120.501100000
............................................................................................................................................................................................................................................................AAGCAACGTATCCACGCATGAAGG.......................................2420.501010000
................................................................................................................................................................................................................................................................AACGTATCCACGCATGAAGGGGGCC..................................2520.501010000
................................................................................................................................................................................................................................................................AACGTATCCACGCATGAAGGGGGCTTT................................2720.501100000
............................................................................................................................................................................................................................................................AAGCAACGTATCCACGCATGAAGGGGG....................................2720.501010000
................................................................................................................................................................................................................................................................AACGTATCCACGCATGAAGGGGGCTT.................................2620.501100000
...................................................................................................................................................................................................................................................................GTATCCACGCATGAAGGGGG....................................2020.501010000
.............................................................................................................................................................................................................................................................AGCAACGTATCCACGCATGAAGGGGG....................................2620.501010000
.........................................................................................................................................................................................................................................................TCAAAGCAACGTATCCACGCATGAAGG.......................................2720.501010000
........................................................................................................................................................................................................GACATGCCACTTTTTTAGCTCGAT...........................................................................................2430.331100000
..........................................................................................................................................................................................................CATGCCACTTTTTTAGCTCGATTC.........................................................................................2430.331100000
........................................................................................................................................................................................................................................................................................TTAT---TCCATATTGATCCGTATTTGG.......2530.331100000
............................................................................................................................................................................................................TGCCACTTTTTTAGCTCGATT..........................................................................................2130.331100000
.........................................................................................................................................................................................................ACATGCCACTTTTTTAGCTCGATTCTA.......................................................................................2730.331100000
.........................................................................................................................................................................................................................................................................................TAT---TCCATATTGATCCGTATTTGGCC.....2630.331010000
........................................................................................................................................................................................................................................................................................TTAT---TCCATATTGATCCGTATTTGGCT.....2730.331100000
...............................................................................................................................................................................................................................................................................................TCCATATTGATCCGTATTTGGC......2230.331010000
........................................................................................................................................................................................................................................................................................TTAT---TCCATATTGATCCGTATTTGGC......2630.331010000
...................................................................................................................................................................................TATA------------CCTTTGACATGCCACTTTTTTAGCT...............................................................................................2930.331000010
........................................................................................................................................................................................................GACATGCCACTTTTTTAGCTCGATTC.........................................................................................2630.331010000
.........................................................................................................................................................................................................................................................................ACGCATGAAGGGGGCTTAT---TCCATA......................2530.331010000
.....................................................................................................................................................................................TA------------CCTTTGACATGCCACTTTTTTAGCTC..............................................................................................2830.331100000
.........................................................................................................................................................................................................ACATGCCACTTTTTTAGCTCGATTC.........................................................................................2530.331010000
......................................................................................................................................................................................................................................................................TCCACGCATGAAGGGGGCTTAT---T...........................2330.331010000
.................................................................................................................................................................................................................................................GTACAAATTCAAAGCAACGTATCCAC................................................2630.331010000
..........................................................................................................................................................................................................................................................................CGCATGAAGGGGGCTTAT---TCCATATTGA..................2830.331010000
..............................................................................................................................................................................................................................................TAAGTACAAATTCAAAGCAACGTA.....................................................2430.331010000
......................................................................................................................................................................................................................................................................TCCACGCATGAAGGGGGCTTAT---TCCAT.......................2730.331010000
.....................................................................................................................................................................................................TTTGACATGCCACTTTTTTAGCTCGATT..........................................................................................2830.331010000
.....................................................................................................................................................................................TA------------CCTTTGACATGCCACTTTTTTAG.................................................................................................2530.331010000
...................................................................................................................................................................................................................................................................................................TATTGATCCGTATTTGGCT.....1940.251010000
droBip1
GTCTA-----------------------------------------------------------------------------------------CATGAAGTCCCATATCT---TTCC----AAAACGAATTTTGAATTTGCTGCTTTCGTGCCGCC-------AGTTTG-TCTTTGTCTATA------------CCTTTGACATGCCATTTTTTTAGCTCGATTCTATATGATAATTTAAGTACAAATTCAAAGCAACGTATCCACGCATGAAG-GGGCTTAT---TCCATATTGAT-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
CTTTAAA-----------------------------------------------------------------------------------------------CCTAGCCTC---TCCC----AAAACATGTGCTGAATTTCTTTCTTTCGGGCAGCT-------ATAGTT-TTTTTGTCCACCGAT---------GTTGTCACTCGCCATTTTTTTAAAGTTAATTTATAACTGGCATGCAAGACAAATTCAAAACATCTTATCCAGCTATGAAGGGGACTAAT---TCCGTGTTTTAA-------------ATTSizeHit CountTotal NormTotal
No Reads
droFic1
CTGATCGA--------------------------------------------------------------------------------------CCCTTAAGCCTAGCCTC---TCCC----AAAACATACGCTGAATTTCCTTTTTCCGATCTGCA-------ATCGTTTTTTTTGTCCACAGAT---------GTTGTCACTCGCCATTTCTGAACAGATAACTTATAACCGACGTGTAATACAAATTCAAAACATCTTATCCAGCTATGAAGCGGACTTAA---CCCGTGTTTTAA-------------ATGSizeHit CountTotal NormTotal
No Reads
droEle1
TTCCATTCTGCTTGGGC---------------------------------------------------------------------CCATTTCCCATTACGTT-----------------------------------------------------C-------CTTTCA-ATTTTATCA----------------TCACTATATGCCATTTCTTAAATTCAATTTTATATGAAATGTTCAAATCAAATTCTAAAAACCGGATCTAGGCATGCAATTGACTTAC---TCCAAACTGCAC-------------AGCSizeHit CountTotal NormTotal
No Reads
droRho1
TACTATTC---------------------------------------------------------CCACTTCCATTTTGTTTGGGAATGCTTA-TATGTAGACCCATTTTG---GCCC----ACATCA--TTTCACTGTGGC--------------A-------TGTTTA-ATGTGGCC----------------TGTTTAATGTGCCACTTTTGAAGTTTAAGACTACAGGATACGTTCAACACAAATTTTAAAAATCGAATCCAGGTATGCAATGGACTTGC---TCCATATTTTAG-------------AGTSizeHit CountTotal NormTotal
No Reads
droBia1
GTCTA-----------------------------------------------------------------------------------------CATGAAGTCCCATACCT---TTCC----AAAACGAATTTAGAATTTGCTGTTTTCGTGCCGCC-------AGTTTG-TCTTTATCTATA------------CCTTTGATATGCCACTTTTTTAGCTCGATTCTATATGATAATTTAATTACAAATTCAAAGAAACGTATCAACGCATGAAGGGGGCTTTT---TCCATATTGAT-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTCTA-----------------------------------------------------------------------------------------CATGAAGTCCCATATCT---TTCC----AAAACGAATTTTGAATTTGCTGTTTCCGTGCCGCC-------AGTTTG-TCTTTGTCTACT------------CCTTTGACATGCCACTTTTTTAGCTCAATCCTGTATGATAATTTAAGTACAAATTCAAAGCAACGTATCCACGCATGAAGGGGGCTTAT---TCCATATTGGT-----------------SizeHit CountTotal NormTotal
No Reads
droEug1
TCACTTTCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTCTTGCTTGCCACTTTTTAAACTTCAATCTATAAGATATTTTTAGGAGTAATTCAAAAACACGTATCCACGTGTGTAGTGGACTTAT---TCCATACTGAAG-------------GTGSizeHit CountTotal NormTotal
No Reads
dm3
AATTT---------------------------------------------------------------------------------------------------------------------------GTTTTTGTATAAAATGCTTTCGTTCCACT-------AATTTA-GGTTTATCAAAG------------TCCTTTACATGCCAAGTTTTAAGATCAGCTCTGTATGCAAGTTTTAAAACAAATTCAAAGAAGCGAATCCACGCATGTAAAGGGCTTAT---TCCAAACTGAAG-------------AGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................TAAAGGGCTTAT---TCCAAACTGAAG-------------AG.26276.001520000000000000000000000000000000000001010100100000011000000000000000000000000000000100100000000000000000000000000000000000000000000000000000001000110110208000000000000000000000000000000000000006100000004002052240000000111060177170000000000000000000000000000000000000000000000000000000000001000011302000000843000000000000003477000000
................................................................................................................................................................................................................................................................................TAAAGGGCTTAT---TCCAAACTGAAG-------------AGT27249.009800000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031000000000000000000000000000000000000000000000001010003040001001150401413191000000000000000000000000000000000000000000000000000000000001000000011000000324000000000000000111000000
..............................................................................................................................................................................................................................................................GAAGCGAATCCACGCATGTAAAGGGC...................................26216.00320000000000000000000000100000000000000000001010100000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000110110403430000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001320000000
................................................................................................................................................................................................................................................................................TAAAGGGCTTAT---TCCAAACTGAAG-------------A..25211.00220000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000005000000030000000000000000000000000000000000000000000000000000000000000000010402040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................TCCACGCATGTAAAGGGCTTAT---TCCAA.......................2729.50190000000000000000000000000000000000000000000000000000000000000000000000000000000000104100000000000000000000002000300000000000000000000000000000005000000000000000000000000000001000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TGTAAAGGGCTTAT---TCCAAACTGAAG-------------A..2729.50190000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000003000000000000000000000000000000000000000000000000100000000000000020110540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TAAAATGCTTTCGTTCCACT-------AATT...................................................................................................................................................2429.501900000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102031110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TAAGATCAGCTCTGTATGCAAGTT.............................................................................2419.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TGTAAAGGGCTTAT---TCCAAACTGAAG-------------AG.2828.50170000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010003000000030103110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..................................................................................................................................................................................................................................................AACAAATTCAAAGAAGCGAAT....................................................2128.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000012001000000000000000000000000000000000000000000000000000000000000000200120000000000000002010000000000000000000000000210000000
........................................................................................................................................................................................................................................................TTCAAAGAAGCGAATCCACGCATG...........................................2428.00160000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100300000000000000000000000000000000000000003000000000000000000000000010100020000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000001000000
.................................................................................................................................................................................................................................................................................AAAGGGCTTAT---TCCAAACTGA..................2128.00160000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000100020002000000000000000000000000000000000000000000000200030000000000000000001000000010000000000000000000000000
...................................................................................................................................................................................................................TTTTAAGATCAGCTCTGTATGCAAG...............................................................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010030000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
....................................................................................................................................................................................................................................................................AATCCACGCATGTAAAGGGCT..................................2126.50130000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000110101000000000000000000000000000000000000000000000000010000000000000010100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................CACGCATGTAAAGGGCTTAT---TCCAAACT....................2826.50130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010003000000000113030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................GCTTAT---TCCAAACTGAAG-------------AG.2026.50130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000403000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000
..............................................................................................................................................................................................................................................................................TGTAAAGGGCTTAT---TCCAAAC.....................2126.50130000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000160000000000000001110000000000000000000000000000000000
......................................................................................................................................................................................................................TAAGATCAGCTCTGTATGCAAGTTT............................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000110020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................................................................................................................................TGCTTTCGTTCCACT-------AATTTA-GGTT............................................................................................................................................2526.00120000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000010000000000000000000000000000000000000000000102130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TAAAACAAATTCAAAGAAGCGAATCCACG...............................................2926.00120000000000000000000000000000000000000000000000002000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010005000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................................................................................................................................................................................GCATGTAAAGGGCTTAT---TCCAAACTGA..................2726.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ACAAATTCAAAGAAGCGAATCCACG...............................................2525.50110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000030000000000000000000000000000000000000000000000001000000002000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
..............................................................................................................................................................................................................................................................................TGTAAAGGGCTTAT---TCCAAACTGAA.................2525.50110000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100001000000000000000301110000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................TCCACGCATGTAAAGGGCTTA................................2125.00100000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000010000000000000000210000000
..............................................................................................................................................................................................................................................................GAAGCGAATCCACGCATGTAAAGGGCT..................................2725.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110100000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000100000000
.....................................................................................................................................................................ATTTA-GGTTTATCAAAG------------TCCT....................................................................................................................2125.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100240000000000000000200000000000000000000000000000000000
.........................................................................................................................................TAAAATGCTTTCGTTCCACT-------AATTTA-GG..............................................................................................................................................2825.00100000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TGCCAAGTTTTAAGATCAGCTCTGTA.....................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
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...............................................................................................................................................................................................................................CTCTGTATGCAAGTTTTAA.........................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................AAATGCTTTCGTTCCACT-------AATTTA-................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TTCGTTCCACT-------AATTTA-GGTTTATCAA......................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TGTAAAGGGCTTAT---TCCAAACTGA..................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................TGCTTTCGTTCCACT-------AATTTA-................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGAATCCACGCATGTAAAGGGC...................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................CACGCATGTAAAGGGCTTAT---TC..........................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................TTTCGTTCCACT-------AATTTA-GGTTTATT........................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TCCACT-------AATTTA-GGTTTATCAAAG------------TCCTTTAC................................................................................................................3220.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TTA-GGTTTATCAAAG------------TCCTTTACA...............................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................CGCATGTAAAGGGCTTAT---TC..........................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TAAAGGGCTTAT---TCCAAACT....................2020.5010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TCCACT-------AATTTA-GGTTTATCA.......................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AGAAGCGAATCCACGCATGTA.........................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TAAAGGGCTTAT---TCCAAACTGAAG-------------AA.2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AGGGCTTAT---TCCAAACTGG..................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TGCTTTCGTTCCACT-------AATTTA-GGTTT...........................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AAAGAAGCGAATCCACGCATGTAAG.......................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................AAAGGGCTTAT---TCCAAACTGAAG-------------A..2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TCTGTATGCAAGTTTTAAAACAAAT..................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTAAAGGGCTTAT---TCCAAACTGAAG-------------AG.2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AAGGGCTTAT---TCCAAACTGAA.................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TGTATGCAAGTTTTAAAACAAATTC................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TC------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-ACCTTGTCCTCT------------CCTTTTATATGCCACTTTTTTATCTCAGCTCTGTATGATACGTTTAAAACAAATTCAAAAAAACGGATCCAGGCATGTAGTGGACTTAC---CCCAAATTGTAA-------------AGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACGTT............................................................................243848.332545000018065874230574672004000
.....................................................................................................................................................................................................................TTTATCTCAGCTCTGTATGATACGTT............................................................................263133.3340000000051691121595031000
....................................................................................................................................................................................................................TTTTATCTCAGCTCTGTATGATACGTT............................................................................273119.003570011002222648580001000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCAAATTGTAA-------------AGC292113.502270000006811131170000000
......................................................................................................................................................................................................................TTATCTCAGCTCTGTATGATACGTT............................................................................253110.67332000212044201296557003000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAACAAA...................................................................29259.5011900000034323891005000
................................................................................................................................................................................................................................TCTGTATGATACGTTTAAAACAAAT..................................................................25251.501030000202655891002000
................................................................................................................................................................................................................................TCTGTATGATACGTTTAAAACAAA...................................................................24248.509700002023838221021000
..................................................................................................................................................................................................................TTTTTTATCTCAGCTCTGTATGATACGTT............................................................................29343.33130000000104026540000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACGTTT...........................................................................25342.33127000000173517553000000
...................................................................................................................................................................................................................TTTTTATCTCAGCTCTGTATGATACGTT............................................................................28341.33124000000131621740000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAAA...................................................................27241.00820000001421141400415000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAAAT..................................................................28219.50390000001161820011000
................................................................................................................................................................................................................................................................................TAGTGGACTTAC---CCCAAATTGTAA-------------AGC27218.00360000008126100000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAACAAAT..................................................................30216.503300000010101300000000
................................................................................................................................................................................................................................TCTGTATGATACGTTTAAAACAAATT.................................................................26213.5027000000311670000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAACAA....................................................................28211.002200000041380006000
............................................................................................................................................................................................................TGCCACTTTTTTATCTCAGCTCTGTA.....................................................................................26311.0033000030812100000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAACAAA...................................................................28210.502100002041200039000
.....................................................................................................................................................................................................TTTTATATGCCACTTTTTTATCTCAGC...........................................................................................27310.00300000001311600000000
..............................................................................................................................................................................................................................GCTCTGTATGATACGTTTAAAACAAA...................................................................2629.001801000063800000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTT............................................................................2239.002700000097830000000
...............................................................................................................................................................................................................................................TAAAACAAATTCAAAAAAACGGA.....................................................2328.001600006014140000000
..........................................................................................................................................................................................................TATGCCACTTTTTTATCTCAGCTCTGTA.....................................................................................2838.0024001000401720000000
..............................................................................................................................................................................................................................GCTCTGTATGATACGTTTAAAACAAAT..................................................................2727.501500000031920000000
..........................................................................................................................................................................................................................CTCAGCTCTGTATGATACGTTTAAAACAAA...................................................................3027.5015000000101400000000
...............................................................................................................................................................................................................................................TAAAACAAATTCAAAAAAACGGAT....................................................2427.001400000015341000000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCAAATTGTA.................2537.0021000000037110000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACGT.............................................................................2336.331900006045112000000
....................................................................................................................................................................................................................TTTTATCTCAGCTCTGTATGATACG..............................................................................2536.3319000000013060000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAACA.....................................................................2726.001200000051400002000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAAAACAAA...................................................................3126.0012000000100200000000
...............................................................................................................................................................................................................................CTCTGTATGATACGTTTAAAACAAA...................................................................2526.001200000023130012000
................................................................................................................................................................................................................................TCTGTATGATACGTTTAAAACAA....................................................................2326.001200000000660000000
........................................................................................................................................................................................................................................................TTCAAAAAAACGGATCCAGGCATGTAG........................................2716.00600000030201000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAA....................................................................2626.001200002012420001000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAACAA....................................................................2725.501100000010010027000
........................................................................................................................................................................................................................................................TTCAAAAAAACGGATCCAGGCATGTAGT.......................................2815.00500000040100000000
...........................................................................................................................................................................................................................................CGTTTAAAACAAATTCAAAAAAACGGA.....................................................2724.00800000002240000000
........................................................................................................................................................................................................................ATCTCAGCTCTGTATGATACGTT............................................................................2334.001200000022053000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAAA........................................................................2634.001200003062100000000
......................................................................................................................................................................................................................TTATCTCAGCTCTGTATGATACGTTT...........................................................................2633.671100000003242000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACG..............................................................................2233.671100006014000000000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCAAATTGTAA-------------AG.2823.50700000002140000000
..............................................................................................................................................................................................................................................TTAAAACAAATTCAAAAAAACGGA.....................................................2423.50700000003040000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAACA.....................................................................2623.50700000000100042000
..............................................................................................................................................................................................................................GCTCTGTATGATACGTTTAAAACAAATT.................................................................2823.50700000011320000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAAAACA.....................................................................2923.50700000051100000000
...............................................................................................................................................................................................................................CTCTGTATGATACGTTTAAAACAAATT.................................................................2723.50700000032110000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAA.........................................................................2233.331000000000000055000
...............................................................................................................................................................................................................CACTTTTTTATCTCAGCTCTGTATGA..................................................................................2633.331000000020710000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTT...........................................................................2333.331000000041410000000
...................................................................................................................................................................................................................TTTTTATCTCAGCTCTGTATGATACGT.............................................................................2733.331000010001430010000
......................................................................................................................................................................................................................TTATCTCAGCTCTGTATGATACGT.............................................................................2433.331000006000103000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAAAACAA....................................................................3023.00600000031200000000
......................................................................................................................................................................................................................TTATCTCAGCTCTGTATGA..................................................................................1933.00900009000000000000
......................................................................................................................................................................................................................TTATCTCAGCTCTGTATGATAC...............................................................................2233.00900009000000000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAA.........................................................................2533.00900000031410000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACA.....................................................................2523.00600000000310011000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAAC......................................................................2623.00600000011210010000
....................................................................................................................................................................................................................TTTTATCTCAGCTCTGTATGATACGT.............................................................................2633.00900120002220000000
......................................................................................................................................................................................................................TTATCTCAGCTCTGTATGATACG..............................................................................2332.67800006000002000000
..............................................................................................................................................................................................................................GCTCTGTATGATACGTT............................................................................1732.67800000010007000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTT............................................................................2032.67800000022211000000
......................................................................................................................................................................................T------------CCTTTTATATGCCACTTTTTTATCTC..............................................................................................2732.67800006020000000000
..........................................................................................................................................................................................................................CTCAGCTCTGTATGATACGTT............................................................................2132.67800000000413000000
.........................................................................................................................................................................................................................................TACGTTTAAAACAAATTCAAAAAAACGGA.....................................................2922.50500000013100000000
.............................................................................................................................................................................................................................................................................ATGTAGTGGACTTAC---CCCAAATTGTAA-------------AGC3022.50500000032000000000
...............................................................................................................................................................................................................................................TAAAACAAATTCAAAAAAACGGATC...................................................2522.50500100012010000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTA..........................................................................2432.33700003000400000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAAAA.......................................................................2732.33700000031300000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACGTTTAA.........................................................................2732.33700000023002000000
.................................................................................................................................................................................................................................................................................AGTGGACTTAC---CCCAAATTGTAA-------------AGC2622.00400000011020000000
...............................................................................................................................................................................................................................................TAAAACAAATTCAAAAAAACGGATCCA.................................................2722.00400000202000000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATA................................................................................2032.00600003000003000000
......................................................................................................................................................................................................TTTATATGCCACTTTTTTATCTCAGC...........................................................................................2632.00600000020400000000
........................................................................................................................................................................TA-ACCTTGTCCTCT------------CCTTTTATA...............................................................................................................2322.00400000000100003000
......................................................................................................................................................................................T------------CCTTTTATATGCCACTTTTTTATC................................................................................................2532.00600006000000000000
.........................................................................................................................................................................................................................................................TCAAAAAAACGGATCCAGGCATGTAGT.......................................2712.00200000010010000000
TC------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-ACCTTGTCCTCT------------CCTTTTA.................................................................................................................2722.00400004000000000000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCA........................1832.00600006000000000000
...............................................................................................................................................................................................................................................TAAAACAAATTCAAAAAAAC........................................................2022.00400004000000000000
........................................................................................................................................................................................................TATATGCCACTTTTTTATCTCAGC...........................................................................................2451.80900000051210000000
............................................................................................................................................................................................................TGCCACTTTTTTATCTCAGCTCTGTATGA..................................................................................2931.67500000010400000000
.....................................................................................................................................................................................................................TTTATCTCAGCTCTGTATGATACGT.............................................................................2531.67500000010220000000
..................................................................................................................................................................................................................TTTTTTATCTCAGCTCTGTATG...................................................................................2231.67500000013010000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAA.......................................................................2431.67500000000000032000
..................................................................................................................................................................................................................TTTTTTATCTCAGCTCTGTATGATACG..............................................................................2731.67500000011030000000
.......................................................................................................................................................................................................TTATATGCCACTTTTTTATCTCAGC...........................................................................................2531.67500000020300000000
..................................................................................................................................................................................................................................TGTATGATACGTTTAAAACAAATTCAA..............................................................2721.50300000000030000000
................................................................................................................................................................................................................................................................................TAGTGGACTTAC---CCCAAATTGTAA-------------AG.2621.50300000002010000000
................................................................................................................................................................................................................................TCTGTATGATACGTTTAAAACAAATTA................................................................2721.50300000030000000000
..............................................................................................................................................................................................................................................TTAAAACAAATTCAAAAAAACGGAT....................................................2521.50300000011010000000
..............................................................................................................................................................................................................................................TTAAAACAAATTCAAAAAAACGGATC...................................................2621.50300000001020000000
..................................................................................................................................................................................................................................TGTATGATACGTTTAAAACAAATTCA...............................................................2621.50300002000010000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAAATT.................................................................2921.50300000001200000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAAAA..................................................................2821.50300000000000012000
......................................................................................................................................................................................................................TTATCTCAGCTCTGTATGATA................................................................................2131.33400003000001000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGA..................................................................................1831.33400003001000000000
..................................................................................................................................................................................................................................................AACAAATTCAAAAAAACGGATCCAGGC..............................................2711.00100000001000000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAACAAT...................................................................2821.00200000010000001000
..................................................................................................................................................................................................................................................AACAAATTCAAAAAAACGGATCCAGG...............................................2611.00100000010000000000
......................................................................................................................................................................................T------------CCTTTTATATGCCACTTTTTTA..................................................................................................2331.00300003000000000000
..............................................................................................................................................................................................................................................................AAAACGGATCCAGGCATGTAGTGGACT..................................2711.00100000000100000000
.............................................................................................................................................................................................................................................................AAAAACGGATCCAGGCATGTAGTGGAC...................................2711.00100000000100000000
..............................................................................................................................................................................................................................GCTCTGTATGATACGTTTAAAACAAAA..................................................................2721.00200000000000011000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAACAAAA..................................................................3021.00200000000000002000
....................................................................................................................................................................................................................................TATGATACGTTTAAAACAAATTCAAAAAAA.........................................................3021.00200000002000000000
..........................................................................................................................................................................................................................CTCAGCTCTGTATGATACGTTTAAAACAA....................................................................2921.00200000000200000000
...........................................................................................................................................................................................................................................................AAAAAAACGGATCCAGGCATGTAGTGGAC...................................2911.00100000010000000000
...............................................................................................................................................................................................................................................TAAAACAAATTCAAAAAAACGGATCCAGGC..............................................3011.00100000010000000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAAAACAAAT..................................................................3221.00200000020000000000
.............................................................................................................................................................................................................................................TTTAAAACAAATTCAAAAAAACGGATCC..................................................2821.00200200000000000000
.....................................................................................................................................................................TTTTA-ACCTTGTCCTCT------------CCTTTTATA...............................................................................................................2621.00200000001100000000
...............................................................................................................................................................................................................................CTCTGTATGATACGTTTAAAACAAAT..................................................................2621.00200000000200000000
.........................................................................................................................................................................................................................................TACGTTTAAAACAAATTCAAAAAA..........................................................2421.00200002000000000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAAAAC......................................................................2821.00200000010000010000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAAC......................................................................2421.00200000000000002000
..............................................................................................................................................................................................................CCACTTTTTTATCTCAGCTCTGTATGA..................................................................................2731.00300000000300000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAA.......................................................................2531.00300000001100001000
..................................................................................................................................................................................................................................................................................GTGGACTTAC---CCCAAATTG...................1931.00300003000000000000
..................................................................................................................................................................................................................TTTTTTATCTCAGCTCTGTATGAT.................................................................................2431.00300000003000000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACGTTTAAAA.......................................................................2931.00300000021000000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGT.............................................................................1831.00300003000000000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAA........................................................................2331.00300000000000021000
..................................................................................................................................................................................................................TTTTTTATCTCAGCTCTGTATGATACGT.............................................................................2831.00300000000120000000
................................................................................................................................................................................................................................TCTGTATGATACGTTTAAA........................................................................1931.00300003000000000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAAATTA................................................................3021.00200000000200000000
......................................................................................................................................................................................................................................................................TCCAGGCATGTAGTGGACTTAC---CCCA........................2611.00100000000010000000
.....................................................................................................................................................................................................................TTTATCTCAGCTCTGTATGATACGTTT...........................................................................2731.00300000010020000000
....................................................................................................................................................................................................................TTTTATCTCAGCTCTGTATGATACGTTT...........................................................................2831.00300000003000000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACGTTTAAA........................................................................2831.00300000010110000000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACGTG............................................................................2431.00300000001011000000
......................................................................................................................................................................................T------------CCTTTTATATGCCACTT.......................................................................................................1831.00300003000000000000
..............................................................................................................................................................................................................................GCTCTGTATGATACGTTTAAAACAA....................................................................2521.00200002000000000000
........................................................................................................................................................................................................................................................TTCAAAAAAACGGATCCAGGCATGTAGTG......................................2911.00100000010000000000
..............................................................................................................................................................................................................................................................AAAACGGATCCAGGCATGTAGTGGAC...................................2611.00100000001000000000
...............................................................................................................................................................................................................................................TAAAACAAATTCAAAAAAACGG......................................................2221.00200000002000000000
................................................................................................................................................................................................................................................................AACGGATCCAGGCATGTAGTGGACT..................................2511.00100000000100000000
...............................................................................................................................................................................................................................................................................GTAGTGGACTTAC---CCCAAATTGTAA-------------AGC2821.00200000001010000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAAC......................................................................2521.00200000001000001000
........................................................................................................................................................................................................TATATGCCACTTTTTTATCTCAG............................................................................................2350.80400004000000000000
.........................................................................................................................................................................................................................................TACGTTTAAAACAAATTCAA..............................................................2040.75300003000000000000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCAAATTGTAA-------------A..2730.67200000010010000000
........................................................................................................................................................................................................................ATCTCAGCTCTGTATGATACGTTT...........................................................................2430.67200000001100000000
..........................................................................................................................................................................................................TATGCCACTTTTTTATCTCAGCTCTG.......................................................................................2630.67200000000200000000
...........................................................................................................................................................................................................................................................................GCATGTAGTGGACTTAC---CCCAAATT....................2530.67201000000010000000
.....................................................................................................................................................................................................TTTTATATGCCACTTTTTTATCTCAG............................................................................................2630.67200000000200000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAA.........................................................................2330.67200000000000011000
................................................................................................................................................................................................................ACTTTTTTATCTCAGCTCTGTATGATACGT.............................................................................3030.67200000010100000000
............................................................................................................................................................................................................TGCCACTTTTTTATCTCAGCTCTG.......................................................................................2430.67200100000100000000
................................................................................................................................................................................................................ACTTTTTTATCTCAGCTCTGTATGATACGTT............................................................................3130.67200000020000000000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCAAATTGTAA-------------...2630.67200000001100000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAA........................................................................2430.67200000020000000000
...................................................................................................................................................................................................................TTTTTATCTCAGCTCTGTATG...................................................................................2130.67200000000200000000
........................................................................................................................................................................................................TATATGCCACTTTTTTATCTCAGCT..........................................................................................2550.60300000020100000000
.................................................................................................................................................................................................................................CTGTATGATACGTTTAAAACAAATT.................................................................2520.50100000010000000000
..................................................................................................................................................................................................................................................................................GTGGACTTAC---CCCAAATTGTAA-------------AGC2520.50100000010000000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAACAAAA..................................................................2920.50100000000000001000
.................................................................................................................................................................................................................................................................................AGTGGACTTAC---CCCAAATTGTAA-------------AG.2520.50100000000100000000
TC------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-ACCTTGTCCTCT------------CCTT....................................................................................................................2420.50100000010000000000
......................................................................................................................................................................TTTA-ACCTTGTCCTCT------------CCTTT...................................................................................................................2120.50100000000000001000
..................................................................................................................................................................................................................................................AACAAATTCAAAAAAACGGAT....................................................2120.50100000001000000000
........................................................................................................................................................................................................................................................TTCAAAAAAACGGATCCA.................................................1820.50100000000001000000
..................................................................................................................................................................................................................................TGTATGATACGTTTAAAACAAATTA................................................................2520.50100000000010000000
.........................................................................................................................................................................................................................TCTCAGCTCTGTATGATACGTTTAAAACAAAA..................................................................3220.50100000000100000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAAAAA.................................................................2920.50100000000000001000
...............................................................................................................................................................................................................................CTCTGTATGATACGTTTAAAACAA....................................................................2420.50100000000000010000
................................................................................................................................................................................................................................TCTGTATGATACGTTTAAAACAAATTCA...............................................................2820.50100000000010000000
......................................................................................................................................................................................................................................TGATACGTTTAAAACAAATTCAAAAAAACGGA.....................................................3220.50100000001000000000
..........................................................................................................................................................................................................................CTCAGCTCTGTATGATACGTTTAAAACA.....................................................................2820.50100000000100000000
........................................................................................................................................................................TA-ACCTTGTCCTCT------------CCTTTTATATGCC...........................................................................................................2720.50100000000010000000
.........................................................................................................................................................................................................................................TACGTTTAAAACAAATTCAAAAAAA.........................................................2520.50100000000010000000
................................................................................................................................................................................................................................................................................TAGTGGACTTAC---CCCAAATTGTAA-------------AGA2720.50100000000010000000
.....................................................................................................................................................................TTTTA-ACCTTGTCCTCT------------CCTTTTATATG.............................................................................................................2820.50100000001000000000
.................................................................................................................................................................................................................................CTGTATGATACGTTTAAAACAAA...................................................................2320.50100000001000000000
...................................................................................................................................................................................................................................................................................TGGACTTAC---CCCAAATTGTAA-------------AGC2420.50100000001000000000
........................................................................................................................................................................TA-ACCTTGTCCTCT------------CCTTTTATATGC............................................................................................................2620.50100000000010000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAACAAT...................................................................2920.50100000000010000000
..........................................................................................................................................................................................................................CTCAGCTCTGTATGATACGTTTAAAAC......................................................................2720.50100000000100000000
..................................................................................................................................................................................................................................TGTATGATACGTTTAAAAC......................................................................1920.50100000000001000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAAAAAA................................................................3020.50100000000000001000
............................................................................................................................................................................................................................................GTTTAAAACAAATTCAAAAAAACGGA.....................................................2620.50100000001000000000
..................................................................................................................................................................................................................................TGTATGATACGTTTAAAACAAATTCAAA.............................................................2820.50100000001000000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTAAAACAAATA.................................................................2920.50100000010000000000
.........................................................................................................................................................................................................................................................TCAAAAAAACGGATCCA.................................................1720.50100000000001000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAACAAATT.................................................................3120.50100000010000000000
......................................................................................................................................................................TTTA-ACCTTGTCCTCT------------CCTTTTATA...............................................................................................................2520.50100000000000001000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAACAAAT..................................................................2920.50100000000100000000
................................................................................................................................................................................................................................TCTGTATGATACGTTTAAAACAAATTC................................................................2720.50100000000100000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAAAACAAAAA.................................................................3020.50100000000000001000
................................................................................................................................................................................................................................................AAAACAAATTCAAAAAAACGGAT....................................................2320.50100000001000000000
........................................................................................................................................................................................................TATATGCCACTTTTTTATCTCAGCTC.........................................................................................2650.40200000000100001000
.....................................................................................................................................................................................................................TTTATCTCAGCTCTGTATGAA.................................................................................2130.33100000000100000000
...................................................................................................................................................................................................................TTTTTATCTCAGCTCTGTATGA..................................................................................2230.33100000000010000000
..........................................................................................................................................................................................................................CTCAGCTCTGTATGATACGTTTAAA........................................................................2530.33100000000100000000
.....................................................................................................................................................................................................................TTTATCTCAGCTCTGTATGAT.................................................................................2130.33100000001000000000
.............................................................................................................................................................................................................................AGCTCTGTATGATACGTTTA..........................................................................2030.33100000000100000000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCAAATTGTAA-------------T..2730.33100000000010000000
..............................................................................................................................................................................................................................GCTCTGTATGATACGTTTAA.........................................................................2030.33100000000000010000
...................................................................................................................................................................................................................TTTTTATCTCAGCTCTGTATGATA................................................................................2430.33100000000100000000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCAAATTGT..................2430.33100000001000000000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTA...........................................................................2130.33100000000010000000
........................................................................................................................................................................................................................ATCTCAGCTCTGTATGA..................................................................................1730.33100000000010000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTT...........................................................................2030.33100000000001000000
............................................................................................................................................................................................................TGCCACTTTTTTATCTCAGCTCTGTATGATA................................................................................3130.33100000000100000000
................................................................................................................................................................................................................ACTTTTTTATCTCAGCTCTGT......................................................................................2130.33100000010000000000
..............................................................................................................................................................................................................................................................................TGTAGTGGACTTAC---CCCAAATTGTAT-------------...2630.33100000010000000000
............................................................................................................................................................................................................................CAGCTCTGTATGATACGTTTAATCT......................................................................2530.33100000000000001000
droSec2
TC------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-ACCTTGTCCTCT------------CCTTTTATATGCCACTTTTTTATCTCAGCTCTGTATGATACGTTTAAAACAAATTCAAAAAAACGGATCCAGGCATGTAGTGGACTTAC---CCCAAATTGTAA-------------A--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................CGGATCCAGGCATGTAGTGGACTTAC---CC..........................28100.4044000
....................................................................................................................................................................................................................TTTTATCTCAGCTCTGTATGATACGT.............................................................................26180.2851130
....................................................................................................................................................................................................................TTTTATCTCAGCTCTGTATGATACGTT............................................................................27180.2243010
.....................................................................................................................................................................................................................TTTATCTCAGCTCTGTATGATACGTT............................................................................26180.2244000
.......................................................................................................................................................................................................................TATCTCAGCTCTGTATGATACGTT............................................................................24190.2141021
..................................................................................................................................................................................................................................................................CGGATCCAGGCATGTAGTGGACTTAC---C...........................27100.2022000
......................................................................................................................................................................................................................................................................TCCAGGCATGTAGTGGACTTAC---CCCA........................26110.1822000
......................................................................................................................................................................................................................................................................TCCAGGCATGTAGTGGACTTAC---CCCAAA......................28110.1821010
........................................................................................................................................................................TA-ACCTTGTCCTCT------------CCTTTTATATGC............................................................................................................26140.1422000
....................................................................................................................................................................................................................TTTTATCTCAGCTCTGTATGATACG..............................................................................25180.1121010
......................................................................................................................................................................................................TTTATATGCCACTTTTTTATCTCAGC...........................................................................................26180.1122000
.....................................................................................................................................................................................................................TTTATCTCAGCTCTGTATGATACGT.............................................................................25180.1121010
............................................................................................................................................................................................................................................................AAAAAACGGATCCAGGCATGT..........................................21100.1010010
...............................................................................................................................................................................................................................................................AAACGGATCCAGGCATGTAGTGGACT..................................26100.1010010
..............................................................................................................................................................................................................................................................AAAACGGATCCAGGCATGTAGTGGAC...................................26100.1011000
.................................................................................................................................................................................................................................................................ACGGATCCAGGCATGTAGTGGACT..................................24100.1011000
................................................................................................................................................................................................................................................................AACGGATCCAGGCATGTAGTGGACT..................................25100.1010100
.................................................................................................................................................................................................................................................................ACGGATCCAGGCATGTAGTGGACTTAC---CC..........................29100.1011000
........................................................................................................................................................................................................................................................TTCAAAAAAACGGATCCAGGCATGTAG........................................27100.1010010
..............................................................................................................................................................................................................................................................AAAACGGATCCAGGCATGTAGTGGACT..................................27100.1011000
.................................................................................................................................................................................................................................................................ACGGATCCAGGCATGTAGTGGACTT.................................25100.1011000
..............................................................................................................................................................................................................................................................AAAACGGATCCAGGCATGTAG........................................21100.1010010
......................................................................................................................................................................................................................................................................TCCAGGCATGTAGTGGACTTAC---............................22110.0911000
.......................................................................................................................................................................................................................................................................CCAGGCATGTAGTGGACTTAC---CCCAAA......................27110.0911000
......................................................................................................................................................................................................................................................................TCCAGGCATGTAGTGGACTTAC---CC..........................24110.0910010
TC------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTA-ACCTTGTCCTCT------------CC......................................................................................................................22120.0811000
...........................................................................................................................................................................................................................TCAGCTCTGTATGATACGTTTAAAAC......................................................................26170.0611000
.....................................................................................................................................................................................................................TTTATCTCAGCTCTGTATGATACGTTTA..........................................................................28170.0611000
...................................................................................................................................................................................................................................GTATGATACGTTTAAAACAAATTCAAA.............................................................27170.0611000
...................................................................................................................................................................................................................................GTATGATACGTTTAAAACAAATTC................................................................24170.0611000
..................................................................................................................................................................................................................................TGTATGATACGTTTAAAACAAAT..................................................................23180.0611000
........................................................................................................................................................................................................................ATCTCAGCTCTGTATGATACGTTTAA.........................................................................26180.0611000
.................................................................................................................................................................................................................CTTTTTTATCTCAGCTCTGTA.....................................................................................21180.0611000
..............................................................................................................................................................................................................CCACTTTTTTATCTCAGCTCTGTATGATA................................................................................29180.0611000
.....................................................................................................................................................................................................TTTTATATGCCACTTTTTTATCTCAGC...........................................................................................27180.0611000
...................................................................................................................................................................................................................TTTTTATCTCAGCTCTGTATGATACGTT............................................................................28180.0610001
...............................................................................................................................................................................................................CACTTTTTTATCTCAGCTCTGTATG...................................................................................25180.0611000
...................................................................................................................................................................................................................................GTATGATACGTTTAAAACAAATT.................................................................23180.0611000
..................................................................................................................................................................................................................................TGTATGATACGTTTAAAACAAATT.................................................................24180.0611000
.......................................................................................................................................................................................................TTATATGCCACTTTTTTATCTCAGCTCT........................................................................................28180.0611000
......................................................................................................................................................................................T------------CCTTTTATATGCCACTTTTTTATC................................................................................................25190.0511000
......................................................................................................................................................................................T------------CCTTTTATATGCCACTTTTTTATCT...............................................................................................26190.0511000
......................................................................................................................................................................................................................TTATCTCAGCTCTGTATGATACGT.............................................................................24190.0511000
droYak3
AATTCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTTTGCAGT-------ACATTG-AGCTTATGTTCTGCT---------GATCTCGCCTGCCACATTTTTATTTCCAACTTGTATGAAAGGTGCATTATGTACTCAAAAAAGCGTATGTACGAATGAAGTGGCGATAA---GCCGAATTCAAA-------------ATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGCCA..........................................................................................................2549.75390167000000016
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGCC...........................................................................................................2448.7535053000000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGCCACA........................................................................................................2747.0028026200000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGCCAC.........................................................................................................2646.00240101400000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGC............................................................................................................2345.5022061510000000
........................................................................................................................................................................TG-AGCTTATGTTCTGCT---------GATCTCGCC...............................................................................................................2634.001204800000000
....................................................................................................................................TTGGATTCGTTCTTTTCTTTGCAGT-------A......................................................................................................................................................2663.8323011000000021
.....................................................................................................................................TGGATTCGTTCTTTTCTTTGCAGT-------A......................................................................................................................................................2573.1422010000000021
.................................................................................................................................................................................TGTTCTGCT---------GATCTCGCCTGCCACA........................................................................................................2542.7511010100000000
..............................................................................................................................................................................TTATGTTCTGCT---------GATCTCGCCTGC............................................................................................................2442.25902700000000
...........................................................................................................................................................................AGCTTATGTTCTGCT---------GATCTCGCCTGC............................................................................................................2742.00803500000000
...................................................................................................................................................................................TTCTGCT---------GATCTCGCCTGCCACATTTT....................................................................................................2751.60802000000006
............................................................................................................................................................................................................................................................AAAAAGCGTATGTACGAATGAAGTGG.....................................2661.50902700000000
..............................................................................................................................................................................TTATGTTCTGCT---------GATCTCGCCTGCC...........................................................................................................2541.50601500000000
......................................................................................................................................................................................TGCT---------GATCTCGCCTGCCACA........................................................................................................2051.40700000000007
...........................................................................................................................................................................AGCTTATGTTCTGCT---------GATCTCGCC...............................................................................................................2451.40702500000000
..............................................................................................................................................................................TTATGTTCTGCT---------GATCTCGCCT..............................................................................................................2241.25501400000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCT..............................................................................................................2141.00400400000000
..............................................................................................................................................................................TTATGTTCTGCT---------GATCTCGCCTGCCAC.........................................................................................................2741.00403100000000
...TCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTTTG..................................................................................................................................................................2661.00603300000000
.................................................................................................................................................................................TGTTCTGCT---------GATCTCGCCTGCCACATT......................................................................................................2741.00403100000000
................................................................................................................................................................................ATGTTCTGCT---------GATCTCGCCTGCCACA........................................................................................................2641.00404000000000
....................................................................................................................................................................................TCTGCT---------GATCTCGCCTGCCACATTTT....................................................................................................2651.00501000000004
.............................................................................................................................................................................................................................................................AAAAGCGTATGTACGAATGAAGTGG.....................................2560.83503200000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCC...............................................................................................................2050.80400400000000
...........................................................................................................................................................................AGCTTATGTTCTGCT---------GATCTCGCCTG.............................................................................................................2640.75302100000000
.................................................................................................................................................................................TGTTCTGCT---------GATCTCGCCTGCCAC.........................................................................................................2440.75301200000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGCCACAAGC.....................................................................................................3040.75300000000003
......................................................................................................................................................................................................................................................TACTCAAAAAAGCGTATGTACGAAT............................................2570.57403100000000
.............................................................................................................................................................................CTTATGTTCTGCT---------GATCTCGCCTGC............................................................................................................2540.50200200000000
.................................................................................................................................................................................TGTTCTGCT---------GATCTCGCCTGCCACAT.......................................................................................................2640.50201100000000
..TTCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTTTG..................................................................................................................................................................2760.50301200000000
.....................................................................................................................................TGGATTCGTTCTTTTCTTTGCAGT-------ACAT...................................................................................................................................................2870.43303000000000
.....................................................................................................................................TGGATTCGTTCTTTTCTTTGCAGT-------ACA....................................................................................................................................................2770.43303000000000
..........................................................................................................................................................................................................................TTCCAACTTGTATGAAAGGTGCATTA.......................................................................2630.33101000000000
...TCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTT....................................................................................................................................................................2460.33201100000000
...........................................................................................................................................................................................................................................................AAAAAAGCGTATGTACGAATGAAGTGG.....................................2760.33201100000000
..TTCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTTTGC.................................................................................................................................................................2860.33201100000000
......................................................................................................................................................................................................................................................TACTCAAAAAAGCGTATGTACGAATGA..........................................2770.29202000000000
.........................................................................................................................................TTCGTTCTTTTCTTTGCAGT-------ACATT..................................................................................................................................................2570.29202000000000
.................................................................................................................................................................................TGTTCTGCT---------GATCTCGCCTGCCA..........................................................................................................2340.25101000000000
............................................................................................................................................................................GCTTATGTTCTGCT---------GATCTCGCCTGC............................................................................................................2640.25100100000000
................................................................................................................................................................................ATGTTCTGCT---------GATCTCGCCTGC............................................................................................................2240.25100100000000
................................................................................................................................................................................ATGTTCTGCT---------GATCTCGCCTGCCAC.........................................................................................................2540.25101000000000
.............................................................................................................................................................................CTTATGTTCTGCT---------GATCTCGCCTGCCA..........................................................................................................2740.25101000000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTG.............................................................................................................2240.25101000000000
..........................................................................................................................................TCGTTCTTTTCTTTGCAGT-------ACATTG-................................................................................................................................................2540.25101000000000
...............................................................................................................................................................................................................................................................AAGCGTATGTACGAATGAAGTGGC....................................2440.25100100000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGCCACAA.......................................................................................................2840.25101000000000
................................................................................................................................................................................ATGTTCTGCT---------GATCTCGCCTGCCA..........................................................................................................2440.25101000000000
..........................................................................................................................................TCGTTCTTTTCTTTGCAGT-------ACATTG-AGC.............................................................................................................................................2840.25101000000000
..............................................................................................................................................................................TTATGTTCTGCT---------GATCTCGCCTGCCACA........................................................................................................2840.25101000000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGCCACATT......................................................................................................2940.25100100000000
....................................................................................................................................................................................................................................................................TATGTACGAATGAAGTGGCGATAA---GC..........................2640.25101000000000
..............................................................................................................................................................................TTATGTTCTGCT---------GATCTCGCCTG.............................................................................................................2340.25101000000000
...............................................................................................................................................................................TATGTTCTGCT---------GATCTCGCCTGCCACAT.......................................................................................................2840.25100000000001
.................................................................................................................................................................................TGTTCTGCT---------GATCTCGCCT..............................................................................................................1940.25100100000000
............................................................................................................................................................................................................................................................AAAAAGCGTATGTACGAATGAAGTGGC....................................2740.25100100000000
.........................................................................................................................................................................................................................................................TCAAAAAAGCGTATGTACGAATGAAG........................................2680.25202000000000
.........................................................................................................................................................................................T---------GATCTCGCCTGCCACATTTTTATT................................................................................................2550.20101000000000
................................................................................................................................................................................ATGTTCTGCT---------GATCTCGCC...............................................................................................................1950.20101000000000
......................................................................................................................................................................................TGCT---------GATCTCGCCTGCCACATTTTT...................................................................................................2550.20101000000000
............................................................................................................................................................................GCTTATGTTCTGCT---------GATCTCGCC...............................................................................................................2350.20101000000000
..............................................................................................................................................................................TTATGTTCTGCT---------GATCTCGCC...............................................................................................................2150.20100100000000
......................................................................................................................................................................................TGCT---------GATCTCGCCTGCCACATT......................................................................................................2250.20101000000000
......................................................................................................................................................................................TGCT---------GATCTCGCCTGCCACATTTT....................................................................................................2450.20101000000000
...................................................................................................................................................................................TTCTGCT---------GATCTCGCCTGCCACATT......................................................................................................2550.20100100000000
....................................................................................................................................................................................TCTGCT---------GATCTCGCCTGCCACATTTTGG..................................................................................................2850.20101000000000
..TTCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTTT...................................................................................................................................................................2660.17100100000000
...TCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTTTGCA................................................................................................................................................................2860.17101000000000
AATTCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTCTT....................................................................................................................................................................2760.17100100000000
AATTCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTT........................................................................................................................................................................2360.17100100000000
....................................................................................................................................TTGGATTCGTTCTTTTCTTTGCAGT-------ACAC...................................................................................................................................................2960.17100100000000
....................................................................................................................................TTGGATTCGTTCTTTTCTTTGCAGT-------AC.....................................................................................................................................................2760.17100100000000
AATTCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTC......................................................................................................................................................................2560.17100100000000
....................................................................................................................................TTGGATTCGTTCTTTTCTTTGCAG...............................................................................................................................................................2460.17101000000000
...TCCG-----------------------------------------------------------------------------------------C-----------------------------------TTGGATTCGTTCTTTTC......................................................................................................................................................................2260.17100100000000
...................................................................................................................................................................................................................TTTTTATTTCCAACTTGTATGAAAGGTG............................................................................2860.17101000000000
....................................................................................................................................TTGGATTCGTTCTTTTCTTTGCAGT-------.......................................................................................................................................................2560.17101000000000
....................................................................................................................................TTGGATTCGTTCTTTTCTTTGCAGT-------ACAT...................................................................................................................................................2960.17100100000000
.........................................................................................................................................TTCGTTCTTTTCTTTGCAGT-------ACA....................................................................................................................................................2370.14101000000000
.........................................................................................................................................TTCGTTCTTTTCTTTGCAGT-------ACAT...................................................................................................................................................2470.14101000000000
...........................................................................................................................................................................................................................................................AAAAAAGCGTATGTACGAATGAAGT.......................................2570.14101000000000
.....................................................................................................................................TGGATTCGTTCTTTTCTTTGCAGT-------AC.....................................................................................................................................................2670.14101000000000
.......................................................................................................................................................................................................................................................ACTCAAAAAAGCGTATGTACGAATGAAG........................................2870.14101000000000
................................................................................................................................................................................................................................................................AGCGTATGTACGAATGAAGTGGA....................................2370.14100100000000
.....................................................................................................................................TGGATTCGTTCTTTTCTTTGCAG...............................................................................................................................................................2370.14101000000000
......................................................................................................................................................................................................................................................TACTCAAAAAAGCGTATGTACGAATG...........................................2670.14101000000000
..........................................................................................................................................TCGTTCTTTTCTTTGCAGT-------ACATT..................................................................................................................................................2470.14101000000000
droEre2
TTTTTTT---------------------------------------------------------------------------------------------------------------------------------------------CGTATACTC-------ATTTTA-ACCTTGTCCTCT------------CCTTTTATATGCCACTTTTTCAACTCA--TTCATATGATACGTTTAAAACAAATTCAAAAAACCGGATCCAAGCATGTAATGGACTTAC---CCCAAATTGTAA-------------AGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 06:01 AM