ID:

dwi_3019

 Coordinate:

scf2_1100000004921:3035542-3035692 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.4 -12.9 -12.5

Flybase annnotation

exon [dwil_GLEANR_5954:1]; CDS [Dwil\GK22748-cds]; intron [Dwil\GK22748-in]

Repeatable elements

NameClassFamilyStrand
(CAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATCAGCACCAGCACCAACAACAGCAACAGATGATGTACAAAGGAGCAAAAGTAAAAAATGTGCATCAAAATGGCCCTGGACAATACATAAGATCGCTGCAAGCCATATTCCCAGTATGCTGTCCTCAGATAGCAAGCAAGGACAGCAATATCCTTTCGGTGCTAATAACAACAACAACAACAACGACAAGAATAACAACTGCAATAATAATGACAATGGCGCTCAGCAGCAATGCATTTCCAATGATGGTG
***********************************************************************************.........................(((..((.(((((((....))))))).))..))).************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M020
head
 V118
embryo
 V119
head
...........................................................................................................................CTCAGATAGCAAGCAAGGAC............................................................................................................ 20 0 1 3.00 3 3 0 0
................................................................................................................................ATAGCAAGCAAGGACAGC......................................................................................................... 18 0 1 3.00 3 3 0 0
.............................................................................................................................CAGATAGCAAGCAAGGACAG.......................................................................................................... 20 0 1 2.00 2 2 0 0
.............................................................................................................................CAGATAGCAAGCAAGGACAGC......................................................................................................... 21 0 1 2.00 2 2 0 0
............................................................................................................................TCAGATAGCAAGCAAGGACAGCA........................................................................................................ 23 0 1 2.00 2 2 0 0
.............................ATGATGTACAAAGGAGCA............................................................................................................................................................................................................ 18 0 1 1.00 1 0 1 0
...................................................................................TACATAAGATCGCTGCAAGCC................................................................................................................................................... 21 0 1 1.00 1 1 0 0
...............................................................................................................................GATAGCAAGCAAGGACAGC......................................................................................................... 19 0 1 1.00 1 1 0 0
.................................................................................AATACATAAGATCGCTGCAAGCC................................................................................................................................................... 23 0 1 1.00 1 0 1 0
..............................................................................................................................AGATAGCAAGCAAGGACAG.......................................................................................................... 19 0 1 1.00 1 1 0 0
.............................................................................................................................CAGATAGCAAGCAAGGACA........................................................................................................... 19 0 1 1.00 1 0 0 1
............................................................................................................................TCAGATAGCAAGCAAGGACAGC......................................................................................................... 22 0 1 1.00 1 1 0 0
.................................................................................................................................................................................................................ATGACAATGGCGCTCAGCAGCAA................... 23 0 1 1.00 1 0 0 1
.....................................................................ATAGCCCTGGACAATGCA.................................................................................................................................................................... 18 2 5 0.20 1 0 1 0
.....................................................................................................................................................................TAACAACAACAACAACAACGACA............................................................... 23 0 11 0.09 1 0 0 1
.....................................................................................................................................................................TAACAACAACAACAACAACG.................................................................. 20 0 20 0.05 1 0 1 0

Anti-sense strand reads

TAGTCGTGGTCGTGGTTGTTGTCGTTGTCTACTACATGTTTCCTCGTTTTCATTTTTTACACGTAGTTTTACCGGGACCTGTTATGTATTCTAGCGACGTTCGGTATAAGGGTCATACGACAGGAGTCTATCGTTCGTTCCTGTCGTTATAGGAAAGCCACGATTATTGTTGTTGTTGTTGTTGCTGTTCTTATTGTTGACGTTATTATTACTGTTACCGCGAGTCGTCGTTACGTAAAGGTTACTACCAC
************************************************************************************************************.........................(((..((.(((((((....))))))).))..))).*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V119
head
.................................................................................TTATGTATTCTAACGACGT....................................................................................................................................................... 19 1 1 1.00 1 1 0 0
.............................................................................................GCGTCGTTCGGCATAAGGC........................................................................................................................................... 19 3 9 0.11 1 0 1 0
...............................................................................................................................................................................AAGTTGTTGCGGTTCTTATT........................................................ 20 3 20 0.05 1 1 0 0
.............................................................................................................................................................................................CTTATTGTTGACGTTGGTAAT......................................... 21 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004921:3035492-3035742 + dwi_3019 ATCAGCA---------------CCAGCACCAACAACAGCAACA-------------------------GA-----T--GA----------------------------------------------------TGT-ACAAAGGAGC----AAAAGTAAAAAATGTGCATCAAAATGGCCCTGGACAATACATAAGAT---CGCTG---CAAGCCA-------------------------------------------------------------------------------------------------------TATTCCCAGTATGCTGTCCTCA------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAGCAATA------------TCCT----------------------------------------------------------------------------------------------------------------------------------TTCGGTGCTAA-------------------------------------------------------------------------------------------------TAACAACAA--------CAACAA------C----------A-----------------------------------------ACGA---------------CAAG---------------A---------------------ATAACAACTGCAATAATAATGACAATGG----------CGCT--C-----------------------AG------CAGCAAT-GCA--T---TTCCA--------------------------------------------ATGATGGTG
droVir3 scaffold_13049:10089780-10090002 - --CAGCA---------------ACAACAACAACAGCAGCAACA-------------------------GA-----T--AC----------------------------------------------------CACCACA--GGAGCTTTTAATGGCCATGG------CCAAATTCAACAATGATCCGCGTC----GA---CGCAGTCACGAGCCGCAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCA--------------------------------------------------------------------------------------------------ACAACAAAA------------TGCTCACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACACAACAACAACAACAGCAATACCAACAACAACAACA------------------------------------------------------------ACAACAGC------------C-------------------------ATAACAATTTGCAACCGTTTGCCAACACTGCCATGCATAACGGTA
droMoj3 scaffold_6496:8055646-8055866 - AGCAGCA---------------GCAGCAGCAGCAACAGCGGCA-------------------------ACG--GCA--G-----------------------------------------------------AC-AACAAA---------------AATTAAAAAGTATCAAAATGGAAAAAGGGAAAAACTAAACT---CAAT--TGCATGCAA-------------------------------------------------------------------------------------------------------CGTTCCAAATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCA------------------------------------------------------------------AAC------------------------------------------------------------------AGCAGCAATAATAATA-------CCAACAGCAACAACAACAACAACAACAACAACAACA-----------------------GCAA---------------GT---------------------GC------------------------------------AACTC------------ATGTGG------CAA------TGGC-AGTTGATTATAAGCCCA--------------------------------------------TTGATGTAG
droGri2 scaffold_967:85-301 - AGCAGCA---------------ACAACAACAGCAGCAGCAACA-------------------------ACA--A-----A----------------------------------------------------TGA-ACCCCAAT-----------------------------------------------------------------------------------------------GAGCCAAATGCG-----------------AAA---------------------------------------------------CGTGTGCGTCTCTCTGGC------------------------ACGGGCAATCAACA-GGATTTCCATCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------AGCAGCAACAACAGCAGCAGCA-GCAACAAC------AAC------------AACAGCAAC-----------------------AA---------------CA---------------------AC------------AAC------------------------AG------------CAGCAG------C------------A----------------------------ACAA---ATGATCTTCAATCAGCAGCAGAGTTTCCAGCAGCG
dp5 2:14895065-14895309 + AGCAGCA---------------GAGGCCGGGGGAGCTGCAACA-------------------------GA-----T--GA----------------------------------------------------TGC-ACGAGCGTGG----GAAAGTCATAAAGGTGCATCAGCCTGGCAATGGACCACACCTGAGAT---CGCTGCCACAAGCCA-------------------------------------------------------------------------------------------------------CAATCACGGAATGCTGTCCGCA------------------------GCTGGCCGCCGGCAAGG--------------------------------------------------------------------------------------------------ACAGCCACA------------TCCTCTGGCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCGGCAGGACACATGAGGACGCTGCTACCACTC---------------------------------------------------------------CTGC-----------------------------------------------------TACTGCTGCTCCTGC----------AGCTAA----------------ACAG------------CAGCCAT-GC------------------------C-------------------------------------TGG
droPer2 scaffold_0:5516088-5516334 - AGCAGCA---------------GAGGCCGGGGGAGCTGCAACA-------------------------GA-----T--GA----------------------------------------------------TGC-ACGAGCGTGG----GAAAGTCATAAAGGTGCATCAGCCTGGCAATGGACCACACCTGAGAT---CGCTGCCACAAGCCA-------------------------------------------------------------------------------------------------------CAATCACGGAATGCTGTCCGCA------------------------GCTGGCCGCCGGCAAGG--------------------------------------------------------------------------------------------------ACAGCCATA------------TCCTCTGGCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCGGCAGGACACATGAGGACGCTGCTACCACTC---------------------------------------------------------------CTGC-----------------------------------------------------TACTGCTGCTACTGC----------AGCTAA----------------ACAG------------CAGCCAT-GC-----------------------------------------------------------CTGGCT
droAna3 scaffold_13248:1387749-1388028 - AACAGCA---------------ACAACATCAACAAGAAAC--AGTGTTGCAACATTGTTAGTGTTGTAAGGACCAA--GGAGCA-------------------------------GGAGCAGAA-------------------------------------------------------------------------------------------------GCAGAAACAGAAACAGAA-------------GGAGCAGGACAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG-------------------------------------------ATAAGGGTCAGTGGCAGGAACAACATCCCACCGAGGAGTTGTTGTCTGCTGGCCCCCGAG--------------------------------------CCAGTGCCAGCAACGACAACAACAACAAAAACAAAAAA------------------------------------------------------------------------------------------------AACA-------------------ACAACAAC-----------------------------------------------------AAC---------------A---------------------ACAACAACAACAACAACA------------------------A------------CGACAACAACCGCAA-------------------------------------------------------------CGGCAACGATCTCAACGGCG
droBip1 scf7180000395895:8269-8487 + AGCAGCA---------------GTAGCAACAACAACAGCAACA-------------------------TCA--ACA--ACAGCA-----------------------------------------------------------------------------------------------------------------------------------------GCAGCAGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------TCCAGCAACAACAACAACAACA------------AT----------AGC-AGCAGCAACAACAGCAGTAGTAGCAG-------------------------------------------------------------------------------------------CCACAACAA---------------TACACCA---------------------AACGGTGC-------ACAA--------------------------------------CAACAACAA--------CAACAG------C----------A-----------------------------------------TCAACAACATCAACAACATCAGC---------------A---------------------ACAACAACAACAACATCA-TCA------TCAA------------------AGGGTT------------GCCAGCAGCAAC--------------------------------------------------------------------CAG
droKik1 scf7180000302441:590832-591039 + AGCAGCA---------------ACAACAGCAGCAGCAGCAGCA-------------------------AA-----T--GA----------------------------------------------------A----CTC---------------------------------------------------------------T-----------------------------------GAACCAAATGCC-----------------AAG---------------------------------------------------CGTGTTAGGTTGTCTGGT------------------------GCTGGTCAGCAGCA-GGACTTCCATCACC----------------------------------------------------------------AGCAGCAGGCTCAGCAGCAGCAGCAACAACA------------AC----------AGC-AGCAGCAACAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAGCAGCAGC-----------------------------------------------------------------------------AACAACA-----------------------------------------------------------------------------------------------------------------------------ACAAAT----------------------------------------------------GATGTTCAATCAGCAACAGAATTTCCAGCAACG
droFic1 scf7180000454113:524544-524785 + AGCAGCA---------------GCAGCAGCAACAACAGCAACA-------------------------GG-----C--GC----------------------------------------------------TGCAACACA---------------T---------------------------------GCACATGAGTCCCAATATTA-----------ATCAGAACAT--------------GAATCC-----------------CAACAT--GATGGCACCATTTGTAAACGGTGGCCACATGCCCTT------------CAACATGCCACC-CCA------------------------GCTGCAA---AACGGAG--------------------------------------------------------------------------------------------------GCAACAACT------------TC---------------------------------------------------------------------------------------------------------------------------------CCCTTCAACATGAACAACATGAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACATGAACAACAACGGAAATGCGAATGGCAATAACC------------------------------------------------------------CCAACTTT------------C-------------------------CCAATGA-------------------------------------T
droEle1 scf7180000491023:317681-317913 - ACCACCA---------------CCACCACCAAACAAATCAATC-------------------------AA-----T--TC--------------------------------------------TGCGGCCAAC-AACAA-----------------------------------------------------------------------------------------------GTGT-------------TTAAGCCAAAAGAGTTCGGCATGAAATGG---------------------AAGCAGCTATACGCTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCAGTGCAGGTCGGTGCTCCGCCGCCCACAAACAACAACAACAATAACAACAACAACAACAACAATAAC--------------------------------AGCAGCAGCAGCAGCAACAACAGCAACAGTAGCAGCAGCAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACATCC------------A-------------------------ATAGT-------------------------------------GCG
droRho1 scf7180000779318:129298-129520 - AGCAACA---------------ATAGCAAACATCGCAGCAACA-------------------------GCA--CCA--GCTACA-------------------------------ACAGCAATA-------------------------------------------------------------------------------------------------AAAGCAGCAAACACAGAA-------------GCAACACCACCAGC----------------------------------------------------------------------------------------------------------------------------AAC-----------------------------------------------------------------------------------------AAC-------------------------------------------ATTACATACAACAG----------------------------------------------------------------------------------------------------------CAACAATAGCATACAA--------------------------------ACCAGCAACAACAGCAGTAATATAGC--------------------CAGAA---G--------CAGCA-------------------------------------------------GCAACA-----------------------CCAAG---------------A---------------------ACAACAATTGCAGCAATA-TCA------CCAGAAAACA------C-----------------------AC----------------------------------------------------------CAGCAACAACATCACCAATAATG
droBia1 scf7180000302193:4810325-4810561 + AGCAACA---------------CCAGCTGCAACAACAACAACA-------------------------ACA--CGA--GCAGCA-----------------------------------------------------------------------------------------------------------------------------------------TTAGCAACAACCAGGGAA-------------GTAACAGC----------------------------------------------------------------------------------------------------------------------------------GACAAC-------------------------------------------------------------------------------------------A------------AC-----------------------------ACATGCTGCAACAGCAACAACATT-----------------------------AGAATCTGTTCCAGCTGCAGCACTAGCAGC--------------------TGCAACACTAA-------------------------------------------------------------------------------------------------CAGCA---G------------------------------------CTGC---------------------AACAACA--GCAAAAGAAGCAACAACTATTGC-----------------------------------------------------TCCTACAGCGACAAC----------AACTC------------GACTTG------CAA---CAGCAAC-AT-GCA--T---TGCCACTCTCGCTG-------------------------------------------T
droTak1 scf7180000415184:293999-294242 + AGCAGCA---------------ACAACAACAATAATAATAACG-------------------------ACA--ATG---A----------------------------------------------------TGC-ACATGC---------------TT--------------------------------------------------------------------------------TAACCAAATTCG------------------AGCATGAGT-AC---A-----------------AT--GCCTATACGCTGCA------AT----------TGGCTGGGGGCGGTGGTGGGAGTGGCGGTGGCA-----------------------AC-----------CAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCACAGCAGCCACCACCAG----------------------------------------------CAACA---G-----CAGCAGCAGCAACAACAGCAGCAACA-TCAGCAGC------AGC------------AGCAGCAAC-----------------------AA---------------GA---------------------AC------------ACT------------------------AC------------CAGCAG------CAA------CAAC-AGAA----------------------------------------------------TATTGCCAACAATG
droEug1 scf7180000409538:241231-241456 + AACAGCA---------------ACAGCAACAGCAACAGCAGCA-------------------------ATA--ACAAATCAACAGCAACATCTACAACAGCAACATCATCATCTT---------CATAATCAGC---------------------------------------------------AGCAAATGCAATCAAGGCAATTGCA-GGCACATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCAGAGTTTTAACAACA------------------ACAAGAATA------------------------------------------------------------------------------------------------------------------------------------------------ACTTCAGTAATAACAACAATAAT---------------------------------------------------------------------------------------------------------AACAA------CAATAATAATA-ACAACAAT-----------------------------------------------------------------------------AACAACAACAACAACA------------------------------------------------------------ACAACAAC------------A-------------------------ATAATAA-------------------------------------T
dm3 chr3L:7757688-7757923 - AACAACA---------------GCAGCAACAGCAGCAGCAACA-------------------------GT-----T--GC----------------------------------------------------AGC-T------------------------------------------------------------------------------------GCAACAACAAAATGATAT-------------TTTACTGCGTGAGGATATCGATGATATAG---------------------ACGCCTTTCTCAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCCCCCTGCACTCATTGGGCTCGCAATCCACCATTAATCCCTTCAACTCCAGCAGCAATAACAACAATCAA--------------------------------AGCTACAATGGAGGCAGTAATCTGAATAATGGCAACCAGAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCGC------------A-------------------------GTTCAAA-------------------------------------T
droSim2 3l:7649921-7650191 - ATCAATAACCATGCCTCCCTCAACAACAACAACAACAGCAATA-------------------------ATA--ATA--AT---A-----------------------------------------------------------------------------------------------------------------------------------------ATAACAACAA--------------CAATCCAGCCACAC------------------------------------------------------------------CAAATGCCAA-----------------------------TCTGGCGGC----------------------------------CAGCAACAATGCCACGCCCACAGTAAACACCGCCTCTGCGGTGGCGCAACAACAGCAGGCGC----------ACGAGAATAGTTTGGTCAACAGCCT--------GGTGGGT------------GTAATCA-------------------------------------------------------------------------------------------------------ACAACAGCAACAACAACAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACAACAACAACAATAATAATACAAACAGCAATAGCA------------------------------------------------------------ACAA----------------------------------------------------------------------------TAATAATAACA
droSec2 scaffold_0:71336-71574 - AGCAACA---------------ACAGCACCAACAGCAGCAGCA-------------------------ACA--GTT--GCAGCT-----------------------------------------------------------------------------------------------------------------------------------------GCAGCAACAAAATGATAT-------------TTTACTGCGTGAGGATATCGATGATATAG---------------------ACGCCTTCCTCAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCCCCCTGCACTCACTGGGCTCGCAATCCACCATTAATCCCTTCAACTCCAGCAGCAATAACAACAATCAA--------------------------------AGCTACAATGGGGGTAGTAATCTGAATAATGGCAACCAGAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCGC------------A-------------------------GTTCGAA-------------------------------------T
droYak3 X:12404332-12404606 - AGCAGCA---------------ACAACACTGATAACTGCAACA-------------------------ACT--TGA--GCTGCA-------------------------------GCAGCAGCA-------------------------------------------------------------------------------------------------ACATCAGCACAGAAACCA-------------GCGACAG----------------------------------------------------------------------------------------------------------------------------------------CAACGCGACAACT--------------------------------------------------------------------------T----------------------------------------------------------GCAGCAGCAACATC-----------------------------------TATTCCAACTGCAATT---GCAATTGCA-----------ATATCTGCCCCAATATCGACGGCTATAGCGAGGAGAGCAGCAACAACAACATAGTTACTAGTACTAG----------------------------------------------CTGCA---G-----CTGCAGTAGCTGCAACAATATCAACT-GCAGCTGC------AGC------------AGCAGCAGT-----------------------------------------------------------------------------------------------------------CAGCATAAAACTAGCGG------CAA------CAGC-AG-----------------------------------------------------------------CGA
droEre2 scaffold_4690:4615377-4615609 + ACCAGCA---------------GCAGCAGCAGCAACAACC--AA---------------------GCGGCG--GCCAGTCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCCA---------CAAGAACAAA---------------------------------------------------AGCAAGCGCTGCAGTCGCAGTCGCA-GTCGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA------------------GCAGCAGCA------------G------------------------------------------------------------------------------------------------------------------------------------CTGCAGTAGCAG-------------------------------------------------------------------------------------------------CAGCAGCAG--------CAGCAG------C----------A-----------------------------------------GCAG---------------CAAC---------------G---------------------CTAGCGTCGGCAGCAGCA-TGT------CCAAAACAAG------CAGCGGTAATCCAGCAG------CAG------CAGC-AG-----------------------------------------------------------------GTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ATCAGCA---------------CCAGCACCAACAACAGCAACA-------------------------GA-----T--GA----------------------------------------------------TGT-ACAAAGGAGC----AAAAGTAAAAAATGTGCATCAAAATGGCCCTGGACAATACATAAGAT---CGCTG---CAAGCCA-------------------------------------------------------------------------------------------------------TATTCCCAGTATGCTGTCCTCA------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAGCAATA------------TCCT----------------------------------------------------------------------------------------------------------------------------------TTCGGTGCTAA-------------------------------------------------------------------------------------------------TAACAACAA--------CAACAA------C----------A-----------------------------------------ACGA---------------CAAG---------------A---------------------ATAACAACTGCAATAATAATGACAATGG----------CGCT--C-----------------------AG------CAGCAAT-GCA--T---TTCCA--------------------------------------------ATGATGGTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................CTCA------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00330000
.............................................................................................................................................................................................................................................................................................................................................................................ATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00330000
..................................................................................................................................................................................................................................................................................................................................................CA------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
..................................................................................................................................................................................................................................................................................................................................................CA------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
.................................................................................................................................................................................................................................................................................................................................................TCA------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000
.....................................................................A-----T--GA----------------------------------------------------TGT-ACAAAGGAGC----A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...........................................................................................................................................................................................TACATAAGAT---CGCTG---CAAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
............................................................................................................................................................................................................................................................................................................................................................................GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.........................................................................................................................................................................................AATACATAAGAT---CGCTG---CAAGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................................................................................................................................................................................................................................................................................................................................................A------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
..................................................................................................................................................................................................................................................................................................................................................CA------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
.................................................................................................................................................................................................................................................................................................................................................TCA------------------------GATAGCA---AGCAAGG--------------------------------------------------------------------------------------------------ACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACAATGG----------CGCT--C-----------------------AG------CAGCAA.....................................................................2311.00100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAACAA--------CAACAA------C----------A-----------------------------------------ACGA---------------CA..............................................................................................................................................................................................23110.09100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAACAA--------CAACAA------C----------A-----------------------------------------ACG................................................................................................................................................................................................................20200.05100010
droVir3
--CAGCA---------------ACAACAACAACAGCAGCAACA-------------------------GA-----T--AC----------------------------------------------------CACCACA--GGAGCTTTTAATGGCCATGG------CCAAATTCAACAATGATCCGCGTC----GA---CGCAGTCACGAGCCGCAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCA--------------------------------------------------------------------------------------------------ACAACAAAA------------TGCTCACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACACAACAACAACAACAGCAATACCAACAACAACAACA------------------------------------------------------------ACAACAGC------------C-------------------------ATAACAATTTGCAACCGTTTGCCAACACTGCCATGCATAACGGTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................GA-----T--AC----------------------------------------------------CACCACA--GGAGCTTTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................ATCCGCGTC----GA---CGCAGTCACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................AC----------------------------------------------------CACCACA--GGAGCTTTTAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGTTTGCCAACACTGCCATGC.........2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------C-------------------------ATAACAATTTGCAACCGTTTGCC......................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACACAACAACAACAACAGCAATACC....................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CACGAGCCGCAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACACAACAACAACAACA............................................................................................................................................................................2220.501000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................GAGCCGCAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCA--------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.091001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACCAACAACAACAACA------------------------------------------------------------ACAACA.....................................................................................25110.091000000000000000000000000000010000000000000000000000000000000000
...AGCA---------------ACAACAACAACAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
.....CA---------------ACAACAACAACAGCAGCAACA-------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CGCAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAGCA--------------------------------------------------------------------------------------------------ACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAACAACAACA------------------------------------------------------------ACAACAGC------------.......................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAACAACAACA------------------------------------------------------------ACAACA.....................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
.......................CAACAACAACAGCAGCAACA-------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
droMoj3
AGCAGCA---------------GCAGCAGCAGCAACAGCGGCA-------------------------ACG--GCA--G-----------------------------------------------------AC-AACAAA---------------AATTAAAAAGTATCAAAATGGAAAAAGGGAAAAACTAAACT---CAAT--TGCATGCAA-------------------------------------------------------------------------------------------------------CGTTCCAAATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCA------------------------------------------------------------------AAC------------------------------------------------------------------AGCAGCAATAATAATA-------CCAACAGCAACAACAACAACAACAACAACAACAACA-----------------------GCAA---------------GT---------------------GC------------------------------------AACTC------------ATGTGG------CAA------TGGC-AGTTGATTATAAGCCCA--------------------------------------------TTGATGTAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGCAGCA---------------ACAACAACAGCAGCAGCAACA-------------------------ACA--A-----A----------------------------------------------------TGA-ACCCCAAT-----------------------------------------------------------------------------------------------GAGCCAAATGCG-----------------AAA---------------------------------------------------CGTGTGCGTCTCTCTGGC------------------------ACGGGCAATCAACA-GGATTTCCATCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAGCAGC---------------------------------------------------------------------------------------------------------------AGCAGCAACAACAGCAGCAGCA-GCAACAAC------AAC------------AACAGCAAC-----------------------AA---------------CA---------------------AC------------AAC------------------------AG------------CAGCAG------C------------A----------------------------ACAA---ATGATCTTCAATCAGCAGCAGAGTTTCCAGCAGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....CA---------------ACAACAACAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCA-GCAACAAC------A.............................................................................................................................................................................................................................................21200.05101
dp5
AGCAGCA---------------GAGGCCGGGGGAGCTGCAACA-------------------------GA-----T--GA----------------------------------------------------TGC-ACGAGCGTGG----GAAAGTCATAAAGGTGCATCAGCCTGGCAATGGACCACACCTGAGAT---CGCTGCCACAAGCCA-------------------------------------------------------------------------------------------------------CAATCACGGAATGCTGTCCGCA------------------------GCTGGCCGCCGGCAAGG--------------------------------------------------------------------------------------------------ACAGCCACA------------TCCTCTGGCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCGGCAGGACACATGAGGACGCTGCTACCACTC---------------------------------------------------------------CTGC-----------------------------------------------------TACTGCTGCTCCTGC----------AGCTAA----------------ACAG------------CAGCCAT-GC------------------------C-------------------------------------TGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................GGGAGCTGCAACA-------------------------GA-----T--GA----------------------------------------------------TGC-A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000001
droPer2
AGCAGCA---------------GAGGCCGGGGGAGCTGCAACA-------------------------GA-----T--GA----------------------------------------------------TGC-ACGAGCGTGG----GAAAGTCATAAAGGTGCATCAGCCTGGCAATGGACCACACCTGAGAT---CGCTGCCACAAGCCA-------------------------------------------------------------------------------------------------------CAATCACGGAATGCTGTCCGCA------------------------GCTGGCCGCCGGCAAGG--------------------------------------------------------------------------------------------------ACAGCCATA------------TCCTCTGGCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCGGCAGGACACATGAGGACGCTGCTACCACTC---------------------------------------------------------------CTGC-----------------------------------------------------TACTGCTGCTACTGC----------AGCTAA----------------ACAG------------CAGCCAT-GC-----------------------------------------------------------CTGGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................CCA-------------------------------------------------------------------------------------------------------CAATCACGGAATGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
droAna3
AACAGCA---------------ACAACATCAACAAGAAAC--AGTGTTGCAACATTGTTAGTGTTGTAAGGACCAA--GGAGCA-------------------------------GGAGCAGAA-------------------------------------------------------------------------------------------------GCAGAAACAGAAACAGAA-------------GGAGCAGGACAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG-------------------------------------------ATAAGGGTCAGTGGCAGGAACAACATCCCACCGAGGAGTTGTTGTCTGCTGGCCCCCGAG--------------------------------------CCAGTGCCAGCAACGACAACAACAACAAAAACAAAAAA------------------------------------------------------------------------------------------------AACA-------------------ACAACAAC-----------------------------------------------------AAC---------------A---------------------ACAACAACAACAACAACA------------------------A------------CGACAACAACCGCAA-------------------------------------------------------------CGGCAACGATCTCAACGGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAAAAAA------------------------------------------------------------------------------------------------AACA-------------------ACAACA......................................................................................................................................................................................................................................................2012.002020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACAACATCCCACCGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002001010
..........................CATCAACAAGAAAC--AGTGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGTTGTTGTCTGCTGGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................ACATCAACAAGAAAC--AGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTCAGTGGCAGGAACAACATCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGGAGTTGTTGTCTGCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAACCGCAA-------------------------------------------------------------CGGCAAC.............2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG-------------------------------------------ATAAGGGTCAGTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....................................................................................................................AGCAGAA-------------------------------------------------------------------------------------------------GCAGAAACAGAAACAGAA-------------GGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGACAACAACAACAAA............................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.................................................................GTAAGGACCAA--GGAGCA-------------------------------GGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................................................................................................................................................................................GAAACAGAAACAGAA-------------GGAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................ATCAACAAGAAAC--AGTGTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..............................................................GTTGTAAGGACCAA--GGAGCA-------------------------------GGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA------------------------A------------CGACAACAACCGC...................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAACCGCAA-------------------------------------------------------------CGGC................1811.001010000
...........................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG-------------------------------------------ATAAGGGTCAGTGGCAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCCCACCGAGGAGTTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................TGTAAGGACCAA--GGAGCA-------------------------------GGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
........................AACATCAACAAGAAAC--AGTGTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
..........................................................................AA--GGAGCA-------------------------------GGAGCAGAA-------------------------------------------------------------------------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.........................................................................................................................................................................................................................................................................GACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG-------------------------------------------ATAAGGGTCAGTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------A------------CGACAACAACCGCAA-------------------------------------------------------------CG..................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACA------------------------A------------CGACAACAACC.....................................................................................2611.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------A------------CGACAACAACCGCAA-------------------------------------------------------------CGGCAAC.............2711.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTCTGCTGGCCCCCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------------A------------CGACAACAACCGCAA-------------------------------------------------------------CGGC................2711.001100000
...................................................................AAGGACCAA--GGAGCA-------------------------------GGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAAAAAA------------------------------------------------------------------------------------------------AACA-------------------ACAA........................................................................................................................................................................................................................................................1960.171010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACAAAAAA------------------------------------------------------------------------------------------------AACA-------------------ACA.........................................................................................................................................................................................................................................................1970.141010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAACAAAAAA------------------------------------------------------------------------------------------------AACA-------------------ACC.........................................................................................................................................................................................................................................................20110.091010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACGACAACAACAAG...............................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------------------------------------------------------------------------------------------------AACA-------------------ACAACAAC-----------------------------------------------------AAC---------------A---------------------AC.....................................................................................................................................................21200.051010000
droBip1
AGCAGCA---------------GTAGCAACAACAACAGCAACA-------------------------TCA--ACA--ACAGCA-----------------------------------------------------------------------------------------------------------------------------------------GCAGCAGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------TCCAGCAACAACAACAACAACA------------AT----------AGC-AGCAGCAACAACAGCAGTAGTAGCAG-------------------------------------------------------------------------------------------CCACAACAA---------------TACACCA---------------------AACGGTGC-------ACAA--------------------------------------CAACAACAA--------CAACAG------C----------A-----------------------------------------TCAACAACATCAACAACATCAGC---------------A---------------------ACAACAACAACAACATCA-TCA------TCAA------------------AGGGTT------------GCCAGCAGCAAC--------------------------------------------------------------------CAGSizeHit CountTotal NormTotal
No Reads
droKik1
AGCAGCA---------------ACAACAGCAGCAGCAGCAGCA-------------------------AA-----T--GA----------------------------------------------------A----CTC---------------------------------------------------------------T-----------------------------------GAACCAAATGCC-----------------AAG---------------------------------------------------CGTGTTAGGTTGTCTGGT------------------------GCTGGTCAGCAGCA-GGACTTCCATCACC----------------------------------------------------------------AGCAGCAGGCTCAGCAGCAGCAGCAACAACA------------AC----------AGC-AGCAGCAACAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGCAGCAGCAGC-----------------------------------------------------------------------------AACAACA-----------------------------------------------------------------------------------------------------------------------------ACAAAT----------------------------------------------------GATGTTCAATCAGCAACAGAATTTCCAGCAACGSizeHit CountTotal NormTotal
No Reads
droFic1
AGCAGCA---------------GCAGCAGCAACAACAGCAACA-------------------------GG-----C--GC----------------------------------------------------TGCAACACA---------------T---------------------------------GCACATGAGTCCCAATATTA-----------ATCAGAACAT--------------GAATCC-----------------CAACAT--GATGGCACCATTTGTAAACGGTGGCCACATGCCCTT------------CAACATGCCACC-CCA------------------------GCTGCAA---AACGGAG--------------------------------------------------------------------------------------------------GCAACAACT------------TC---------------------------------------------------------------------------------------------------------------------------------CCCTTCAACATGAACAACATGAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACATGAACAACAACGGAAATGCGAATGGCAATAACC------------------------------------------------------------CCAACTTT------------C-------------------------CCAATGA-------------------------------------TSizeHit CountTotal NormTotal
No Reads
droEle1
ACCACCA---------------CCACCACCAAACAAATCAATC-------------------------AA-----T--TC--------------------------------------------TGCGGCCAAC-AACAA-----------------------------------------------------------------------------------------------GTGT-------------TTAAGCCAAAAGAGTTCGGCATGAAATGG---------------------AAGCAGCTATACGCTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCAGTGCAGGTCGGTGCTCCGCCGCCCACAAACAACAACAACAATAACAACAACAACAACAACAATAAC--------------------------------AGCAGCAGCAGCAGCAACAACAGCAACAGTAGCAGCAGCAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACATCC------------A-------------------------ATAGT-------------------------------------GCGSizeHit CountTotal NormTotal
No Reads
droRho1
AGCAACA---------------ATAGCAAACATCGCAGCAACA-------------------------GCA--CCA--GCTACA-------------------------------ACAGCAATA-------------------------------------------------------------------------------------------------AAAGCAGCAAACACAGAA-------------GCAACACCACCAGC----------------------------------------------------------------------------------------------------------------------------AAC-----------------------------------------------------------------------------------------AAC-------------------------------------------ATTACATACAACAG----------------------------------------------------------------------------------------------------------CAACAATAGCATACAA--------------------------------ACCAGCAACAACAGCAGTAATATAGC--------------------CAGAA---G--------CAGCA-------------------------------------------------GCAACA-----------------------CCAAG---------------A---------------------ACAACAATTGCAGCAATA-TCA------CCAGAAAACA------C-----------------------AC----------------------------------------------------------CAGCAACAACATCACCAATAATGSizeHit CountTotal NormTotal
No Reads
droBia1
AGCAACA---------------CCAGCTGCAACAACAACAACA-------------------------ACA--CGA--GCAGCA-----------------------------------------------------------------------------------------------------------------------------------------TTAGCAACAACCAGGGAA-------------GTAACAGC----------------------------------------------------------------------------------------------------------------------------------GACAAC-------------------------------------------------------------------------------------------A------------AC-----------------------------ACATGCTGCAACAGCAACAACATT-----------------------------AGAATCTGTTCCAGCTGCAGCACTAGCAGC--------------------TGCAACACTAA-------------------------------------------------------------------------------------------------CAGCA---G------------------------------------CTGC---------------------AACAACA--GCAAAAGAAGCAACAACTATTGC-----------------------------------------------------TCCTACAGCGACAAC----------AACTC------------GACTTG------CAA---CAGCAAC-AT-GCA--T---TGCCACTCTCGCTG-------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droTak1
AGCAGCA---------------ACAACAACAATAATAATAACG-------------------------ACA--ATG---A----------------------------------------------------TGC-ACATGC---------------TT--------------------------------------------------------------------------------TAACCAAATTCG------------------AGCATGAGT-AC---A-----------------AT--GCCTATACGCTGCA------AT----------TGGCTGGGGGCGGTGGTGGGAGTGGCGGTGGCA-----------------------AC-----------CAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCACAGCAGCCACCACCAG----------------------------------------------CAACA---G-----CAGCAGCAGCAACAACAGCAGCAACA-TCAGCAGC------AGC------------AGCAGCAAC-----------------------AA---------------GA---------------------AC------------ACT------------------------AC------------CAGCAG------CAA------CAAC-AGAA----------------------------------------------------TATTGCCAACAATGSizeHit CountTotal NormTotal
No Reads
droEug1
AACAGCA---------------ACAGCAACAGCAACAGCAGCA-------------------------ATA--ACAAATCAACAGCAACATCTACAACAGCAACATCATCATCTT---------CATAATCAGC---------------------------------------------------AGCAAATGCAATCAAGGCAATTGCA-GGCACATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGCAGAGTTTTAACAACA------------------ACAAGAATA------------------------------------------------------------------------------------------------------------------------------------------------ACTTCAGTAATAACAACAATAAT---------------------------------------------------------------------------------------------------------AACAA------CAATAATAATA-ACAACAAT-----------------------------------------------------------------------------AACAACAACAACAACA------------------------------------------------------------ACAACAAC------------A-------------------------ATAATAA-------------------------------------TSizeHit CountTotal NormTotal
No Reads
dm3
AACAACA---------------GCAGCAACAGCAGCAGCAACA-------------------------GT-----T--GC----------------------------------------------------AGC-T------------------------------------------------------------------------------------GCAACAACAAAATGATAT-------------TTTACTGCGTGAGGATATCGATGATATAG---------------------ACGCCTTTCTCAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCCCCCTGCACTCATTGGGCTCGCAATCCACCATTAATCCCTTCAACTCCAGCAGCAATAACAACAATCAA--------------------------------AGCTACAATGGAGGCAGTAATCTGAATAATGGCAACCAGAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCGC------------A-------------------------GTTCAAA-------------------------------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGTAATCTGAATAATGGCAA................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGCGTGAGGATATCGATGATATAG---------------------ACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGGAGGCAGTAATCTGA..........................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCAATCCACCATTAATCCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGGAGGCAGTAATCTG...........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................TACTGCGTGAGGATATCGATGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCGC------------A-------------------------GT...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCACCATTAATCCCTTCAACTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCAGCAATAACAACAATCAA--------------------------------AGC................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGGAGGCAGTAATCTGAATAA......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TACTGCGTGAGGATATCGATGATATA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------AGCTACAATGGAGGCAGTAATCT............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAGGCAGTAATCTGAATAAT.....................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................GATAT-------------TTTACTGCGTGAGGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................................TTTACTGCGTGAGGATATCGATGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACCAGAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA.......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TACTGCGTGAGGATATCGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................C----------------------------------------------------AGC-T------------------------------------------------------------------------------------GCAACAACAAAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACAACA---------------GCAGCAACAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000
AACAACA---------------GCAGCAACAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A---------------GCAGCAACAGCAGCAGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...AACA---------------GCAGCAACAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......A---------------GCAGCAACAGCAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
AACAACA---------------GCAGCAACAGCAGCAGCAACA-------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CAACA---------------GCAGCAACAGCAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCAGCAACAGCAGCAGCAACA-------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCAGCAACAGCAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......A---------------GCAGCAACAGCAGCAGCAACA-------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AACA---------------GCAGCAACAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droSim2
ATCAATAACCATGCCTCCCTCAACAACAACAACAACAGCAATA-------------------------ATA--ATA--AT---A-----------------------------------------------------------------------------------------------------------------------------------------ATAACAACAA--------------CAATCCAGCCACAC------------------------------------------------------------------CAAATGCCAA-----------------------------TCTGGCGGC----------------------------------CAGCAACAATGCCACGCCCACAGTAAACACCGCCTCTGCGGTGGCGCAACAACAGCAGGCGC----------ACGAGAATAGTTTGGTCAACAGCCT--------GGTGGGT------------GTAATCA-------------------------------------------------------------------------------------------------------ACAACAGCAACAACAACAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACAACAACAACAATAATAATACAAACAGCAATAGCA------------------------------------------------------------ACAA----------------------------------------------------------------------------TAATAATAACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................ATA-------------------------ATA--ATA--AT---A-----------------------------------------------------------------------------------------------------------------------------------------ATAACAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.7710000010000000000000
droSec2
AGCAACA---------------ACAGCACCAACAGCAGCAGCA-------------------------ACA--GTT--GCAGCT-----------------------------------------------------------------------------------------------------------------------------------------GCAGCAACAAAATGATAT-------------TTTACTGCGTGAGGATATCGATGATATAG---------------------ACGCCTTCCTCAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCCCCCTGCACTCACTGGGCTCGCAATCCACCATTAATCCCTTCAACTCCAGCAGCAATAACAACAATCAA--------------------------------AGCTACAATGGGGGTAGTAATCTGAATAATGGCAACCAGAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAATCGC------------A-------------------------GTTCGAA-------------------------------------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................ATGATATAG---------------------ACGCCTTCCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..............................AACAGCAGCAGCA-------------------------ACA--GTT--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410010
..........................CACCAACAGCAGCAGCA-------------------------ACA--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.0810100
.........................GCACCAACAGCAGCAGCA-------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.0610001
...........................ACCAACAGCAGCAGCA-------------------------ACC--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
droYak3
AGCAGCA---------------ACAACACTGATAACTGCAACA-------------------------ACT--TGA--GCTGCA-------------------------------GCAGCAGCA-------------------------------------------------------------------------------------------------ACATCAGCACAGAAACCA-------------GCGACAG----------------------------------------------------------------------------------------------------------------------------------------CAACGCGACAACT--------------------------------------------------------------------------T----------------------------------------------------------GCAGCAGCAACATC-----------------------------------TATTCCAACTGCAATT---GCAATTGCA-----------ATATCTGCCCCAATATCGACGGCTATAGCGAGGAGAGCAGCAACAACAACATAGTTACTAGTACTAG----------------------------------------------CTGCA---G-----CTGCAGTAGCTGCAACAATATCAACT-GCAGCTGC------AGC------------AGCAGCAGT-----------------------------------------------------------------------------------------------------------CAGCATAAAACTAGCGG------CAA------CAGC-AG-----------------------------------------------------------------CGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG----------------------------------------------CTGCA---G-----CTGCAGTAGCTGC..........................................................................................................................................................................................................................................................................2214.00404000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------------------------------------CTGCA---G-----CTGCAGTAGCTGA..........................................................................................................................................................................................................................................................................2111.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG----------------------------------------------CTGCA---G-----CTGCAGTAGCT............................................................................................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTGC------AGC------------AGCAGCAGT-----------------------------------------------------------------------------------------------------------CAGC.......................................................................................................2311.00100000100000
................................................................................TGCA-------------------------------GCAGCAGCA-------------------------------------------------------------------------------------------------ACATCAGCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.20101000000000
droEre2
ACCAGCA---------------GCAGCAGCAGCAACAACC--AA---------------------GCGGCG--GCCAGTCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCCA---------CAAGAACAAA---------------------------------------------------AGCAAGCGCTGCAGTCGCAGTCGCA-GTCGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA------------------GCAGCAGCA------------G------------------------------------------------------------------------------------------------------------------------------------CTGCAGTAGCAG-------------------------------------------------------------------------------------------------CAGCAGCAG--------CAGCAG------C----------A-----------------------------------------GCAG---------------CAAC---------------G---------------------CTAGCGTCGGCAGCAGCA-TGT------CCAAAACAAG------CAGCGGTAATCCAGCAG------CAG------CAGC-AG-----------------------------------------------------------------GTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAAACAAG------CAGCGGTAATCCAGC............................................................................................2511.0010100000
...................................................................................AGCAGCAACAACAACAGCAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28130.771000000010
...........................................................................................................................................................................................................AGTCGCA-GTCGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000100
.........................................................................................AACAACAACAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.2040000040
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG--------CAGCAG------C----------A-----------------------------------------GCAG---------------CAAC---------------G---------------------C......................................................................................................................................................20100.1011000000
......................................................................................AGCAACAACAACAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020002000
.................................................................................................................................................................................................................A-GTCGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA------------------GCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.0610000100
..................................................................................CAGCAGCAACAACAACAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100
............................................................................................AACAACAGCAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100
.........................................................................................AACAACAACAGCAGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
...................................................................................................................................................................................................GCAGTCGCAGTCGCA-GTCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100
...............................................................................CAGCAGCAGCAACAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
......................................................................................................................................................................................................................GCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA------------------GCAGCAGCA------------G------------------------------------------------------------------------------------------------------------------------------------CTGC..............................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000
.....................................................................................................................................................................................................................CGCAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCA------------------GCAGCAGCA------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010
................................................................................AGCAGCAGCAACAACAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
........................................................................................CAACAACAACAGCAGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG-------------------------------------------------------------------------------------------------CAGCAGCAG--------CAGCAG------C----------.............................................................................................................................................................................................................................................................19200.0510000010
....................................................................................GCAGCAACAACAACAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG--------CAGCAG------C----------A-----------------------------------------GCAG---------------C...............................................................................................................................................................................................19200.0511000000
.......................................................................................GCAACAACAACAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000
..................................................................................CAGCAGCAACAACAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000

Generated: 05/18/2015 at 05:50 AM