ID:

dwi_301

 Coordinate:

scf2_1100000003862:566-716 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dwil_GLEANR_4218:2]; CDS [Dwil\GK21225-cds]; intron [Dwil\GK21225-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-20_DWil-LTRLTRGypsy+
mature
  1. scf2_1100000010561:584-606 +
  2. scf2_1100000010572:1608-1630 -
  3. scf2_1100000001467:5464-5486 -
  4. scf2_1100000001511:3005-3027 -
  5. dwi_301  scf2_1100000003862:641-663 -
  6. scf2_1100000004389:12958-12980 -
  7. scf2_1100000004532:3659-3681 -
  8. scf2_1100000004577:3868604-3868626 -
  9. scf2_1100000004592:24579-24601 -
  10. scf2_1100000004595:228437-228459 -
  11. scf2_1100000004884:364261-364283 +
  12. scf2_1100000004920:59944-59966 -
  13. scf2_1100000004958:1530377-1530399 -
  14. scf2_1100000004961:2356417-2356439 -
  15. scf2_1100000004961:4191298-4191320 -
  16. scf2_1100000004963:373451-373473 +
  17. scf2_1100000004963:994815-994837 -
  18. scf2_1100000004965:809331-809353 +
  19. scf2_1100000004970:6776-6798 -
  20. dwi_225  scf2_1100000001088:3196-3218 -
star
  1. scf2_1100000010572:1577-1602 -
  2. scf2_1100000001458:110-135 +
  3. scf2_1100000010675:194-219 +
  4. scf2_1100000001511:2974-2999 -
  5. scf2_1100000003360:12324-12349 +
  6. dwi_301  scf2_1100000003862:610-635 -
  7. scf2_1100000004389:12927-12952 -
  8. scf2_1100000004577:3868573-3868598 -
  9. scf2_1100000004833:4076-4101 +
  10. scf2_1100000004864:12900-12925 +
  11. dwi_4324  scf2_1100000004936:578879-578904 -
  12. scf2_1100000004958:1530346-1530371 -
  13. scf2_1100000004961:4191267-4191292 -
  14. dwi_225  scf2_1100000001088:3165-3190 -
  15. scf2_1100000000509:2366-2391 +
  16. scf2_1100000000574:1809-1834 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCAACTGTGAATGTAGGCGCCAAATCCAAGAATCACAAGCATTGGCTGACTCATGTTACCCAGCGATCGTGGCCACTGCTAATATTGTAGATGCATCCGCTATACCCTCTTGTCCATCTTAACTTGCATGTTGGATTTATCTCTGTTGTGCTCCCAGTTTGTGGCATTACAGATTCCTCTGAATGTCCAAATTTTTTTTAGCTTCATGCCTTCATGGCAGGACTCAAGAGGTCCCTAAAATCCTTGGTGAT
*******************************************************************************************************......................(((((.((((......)))).)))))......********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
................................................ACTCATGTTACCCAGCGATCGTGG................................................................................................................................................................................... 24 0 20 2.45 49 48 0 0 1 0
................................................................................................................................................................................CTCTGAATGTCCAAATTTTTTTTAGCTT............................................... 28 0 20 2.45 49 0 49 0 0 0
.......................................................................................................ACCCTCTTGTCCATCTTAACTTG............................................................................................................................. 23 0 20 1.30 26 26 0 0 0 0
.......................................................................................................ACCCTCTTGTCCATCTTAACTTGCA........................................................................................................................... 25 0 20 1.15 23 23 0 0 0 0
.......................................................................................................ACCCTCTTGTCCATCTTAACTTGC............................................................................................................................ 24 0 20 1.10 22 22 0 0 0 0
...................................................................................................................................TGGATTTATCTCTGTTGTGCTCCCAG.............................................................................................. 26 0 16 1.00 16 16 0 0 0 0
.......................................................................................................ACCCTCTTGTCCATCTTAACTTGCATGT........................................................................................................................ 28 0 20 0.85 17 14 3 0 0 0
..................................................TCATGTTACCCAGCGATCGTGGCCAC............................................................................................................................................................................... 26 0 20 0.75 15 15 0 0 0 0
...................................................................................................CTATACCCTCTTGTCCATCTTAACT............................................................................................................................... 25 0 20 0.70 14 0 14 0 0 0
................................................................................................................................TGTTGGATTTATCTCTGTTGTGCTC.................................................................................................. 25 0 20 0.60 12 0 12 0 0 0
..................................................TCATGTTACCCAGCGATCGTGGCCA................................................................................................................................................................................ 25 0 20 0.50 10 10 0 0 0 0
.........................................................................................................................................TATCTCTGTTGTGCTCCCAGTTTGTGG....................................................................................... 27 0 17 0.35 6 3 3 0 0 0
...................................................................................................................................TGGATTTATCTCTGTTGTGCTCCCA............................................................................................... 25 0 17 0.35 6 6 0 0 0 0
..................................................TCATGTTACCCAGCGATCGTGGCC................................................................................................................................................................................. 24 0 20 0.35 7 7 0 0 0 0
....................................................................................................................................GGATTTATCTCTGTTGTGCTCCCAG.............................................................................................. 25 0 16 0.31 5 5 0 0 0 0
...................................................................................................................................TGGATTTATCTCTGTTGTGCTCCCAGT............................................................................................. 27 0 16 0.31 5 5 0 0 0 0
.......................................................................................................ACCCTCTTGTCCATCTTAACTTGCATG......................................................................................................................... 27 0 20 0.30 6 6 0 0 0 0
............................................................................................................................TGCATGTTGGATTTATCTCTGTTG....................................................................................................... 24 0 19 0.26 5 2 3 0 0 0
......................................................................................................................TTAACTTGCATGTTGGATTTATCTC............................................................................................................ 25 0 19 0.26 5 5 0 0 0 0
............................................................................TGCTAATATTGTAGATGCATCCGC....................................................................................................................................................... 24 0 8 0.25 2 1 1 0 0 0
............................................................................TGCTAATATTGTAGATGCATCCGCTA..................................................................................................................................................... 26 0 8 0.25 2 1 1 0 0 0
........................................................................................................................................TTATCTCTGTTGTGCTCCCAGTTTG.......................................................................................... 25 0 17 0.24 4 4 0 0 0 0
......................AATCCAAGAATCACAAGCATTGGCTGAC......................................................................................................................................................................................................... 28 0 18 0.17 3 3 0 0 0 0
......................AATCCAAGAATCACAAGCATTG............................................................................................................................................................................................................... 22 0 18 0.17 3 2 0 0 1 0
......................AATCCAAGAATCACAAGCATTGGC............................................................................................................................................................................................................. 24 0 18 0.17 3 3 0 0 0 0
............................................................................................................................TGCATGTTGGATTTATCTCTGTTGTG..................................................................................................... 26 0 19 0.16 3 0 3 0 0 0
.....TGTGAATGTAGGCGCCAAATCCAAG............................................................................................................................................................................................................................. 25 0 20 0.15 3 0 3 0 0 0
.....................................................TGTTACCCAGCGATCGTGGCCAC............................................................................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0
........................................................TACCCAGCGATCGTGGCCACTGCTA.......................................................................................................................................................................... 25 0 20 0.15 3 0 0 3 0 0
..............................................................................................................................................................................................................TGCCTTCATGGCAGGACTCAAGAGG.................... 25 0 15 0.13 2 1 1 0 0 0
.....................................................................................................................................GATTTATCTCTGTTGTGCTCCCAGTTTG.......................................................................................... 28 0 16 0.13 2 1 1 0 0 0
....................................................................................................................................GGATTTATCTCTGTTGTGCTCCCAGTT............................................................................................ 27 0 16 0.13 2 2 0 0 0 0
..........................................................................ACTGCTAATATTGTAGATGCATCC......................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0
..............................................................................CTAATATTGTAGATGCATCCGCTA..................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0
....................................................................................TTGTAGATGCATCCGCTATACCCTCT............................................................................................................................................. 26 0 8 0.13 1 1 0 0 0 0
...................................................................................................................................TGGATTTATCTCTGTTGTGCTCCCAGTT............................................................................................ 28 0 16 0.13 2 2 0 0 0 0
......................................................................................................................................................................................................................TGGCAGGACTCAAGAGGTCCC................ 21 0 17 0.12 2 2 0 0 0 0
.....................AAATCCAAGAATCACAAGCATTGGC............................................................................................................................................................................................................. 25 0 17 0.12 2 2 0 0 0 0
....................................................................................................................................GGATTTATCTCTGTTGTGCTCCCA............................................................................................... 24 0 17 0.12 2 2 0 0 0 0
.......................................................................................................................................TTTATCTCTGTTGTGCTCCCAGTTTG.......................................................................................... 26 0 17 0.12 2 2 0 0 0 0
.................................................................................................................................................................TGGCATTACAGATTCCTCTGAATG.................................................................. 24 0 9 0.11 1 1 0 0 0 0
......................AATCCAAGAATCACAAGCATTGGCTG........................................................................................................................................................................................................... 26 0 18 0.11 2 2 0 0 0 0
......................AATCCAAGAATCACAAGCATTGG.............................................................................................................................................................................................................. 23 0 18 0.11 2 2 0 0 0 0
..................................................TCATGTTACCCAGCGATCGTGGCCACTGC............................................................................................................................................................................ 29 0 20 0.10 2 2 0 0 0 0
...................................................................................................CTATACCCTCTTGTCCATCTTAAC................................................................................................................................ 24 0 20 0.10 2 0 2 0 0 0
...................................................................................................................................TGGATTTATCTCTGTTGTGCTCC................................................................................................. 23 0 20 0.10 2 0 2 0 0 0
...........................................GGCTGACTCATGTTACCCAGCGATCG...................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
...............................................................................................................................ATGTTGGATTTATCTCTGTTGTGC.................................................................................................... 24 0 20 0.10 2 0 2 0 0 0
....................................................................................................TATACCCTCTTGTCCATCTTAACT............................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
.................................................CTCATGTTACCCAGCGATCGTGG................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0
................................................ACTCATGTTACCCAGCGATCGTGGCCA................................................................................................................................................................................ 27 0 20 0.10 2 0 2 0 0 0
......................................................................................................TACCCTCTTGTCCATCTTAACTTGCA........................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
..............................................................................................................................CATGTTGGATTTATCTCTGTTGTGC.................................................................................................... 25 0 20 0.10 2 0 2 0 0 0
................................................................................................................TCCATCTTAACTTGCATGTTGGATT.................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................................TCTCTGTTGTGCTCCCAGTTTGTGGCA..................................................................................... 27 0 13 0.08 1 1 0 0 0 0
.............TAGGCGCCAAATCCAAGAATCACAAGC................................................................................................................................................................................................................... 27 0 14 0.07 1 0 1 0 0 0
...................................................................................................................................TGGATTTATCTCTGTTGTTCTCCCAG.............................................................................................. 26 1 16 0.06 1 1 0 0 0 0
...................................................................................................................................TGGATTTATCTCTTTTGTGCTCCCAG.............................................................................................. 26 1 16 0.06 1 1 0 0 0 0
........................................................................................................................................................................ACAGATTCCTCTGAATGTCCAAATT.......................................................... 25 0 16 0.06 1 1 0 0 0 0
.....................................................................................................................................................................ATTACAGATTCCTCTGAATGT................................................................. 21 0 16 0.06 1 0 1 0 0 0
.....................................................................................................................................GATTTATCTCTGTTGTGCTCCCAG.............................................................................................. 24 0 16 0.06 1 1 0 0 0 0
.........................................................................................................................................TATCTCTGTTGTGCTCCCAGTT............................................................................................ 22 0 17 0.06 1 0 1 0 0 0
...........................................................................................................................................TCTCTGTTGTGCTCCCAGTTTGTGG....................................................................................... 25 0 17 0.06 1 1 0 0 0 0
........................................................................................................................................TTATCTCTGTTGTGCTCCCAGTTTGT......................................................................................... 26 0 17 0.06 1 0 1 0 0 0
.....................AAATCCAAGAATCACAAGCATTGGCT............................................................................................................................................................................................................ 26 0 17 0.06 1 1 0 0 0 0
.........................................................................................................................................TATCTCTGTTGTGCTCCCAGTTTG.......................................................................................... 24 0 17 0.06 1 0 1 0 0 0
.....................AAATCCAAGAATCACAAGCATTGG.............................................................................................................................................................................................................. 24 0 17 0.06 1 1 0 0 0 0
..........................................................................................................................................ATCTCTGTTGTGCTCCCAGTTTGTG........................................................................................ 25 0 17 0.06 1 1 0 0 0 0
...........................................................................................................................................TCTCTGTTGTGCTCCCAGTTTG.......................................................................................... 22 0 17 0.06 1 1 0 0 0 0
.......................................................................................................................................TTTATCTCTGTTGTGCTCCCAGTT............................................................................................ 24 0 17 0.06 1 1 0 0 0 0
.....................AAATCCAAGAATCACAAGCATTG............................................................................................................................................................................................................... 23 0 17 0.06 1 1 0 0 0 0
...........................................................................................................................................TCTCTGTTGTGCTCCCAGTTTGTGGTG..................................................................................... 27 2 17 0.06 1 0 1 0 0 0
...........................................................................................................................................TCTCTGTTGTGCTCCCAGTTTGTTG....................................................................................... 25 1 17 0.06 1 0 1 0 0 0
......................AATCCAAGAATCACAAGCATT................................................................................................................................................................................................................ 21 0 18 0.06 1 0 1 0 0 0
............................................................................................................................................CTCTGTTGTGCTCCCAGTTTGTGG....................................................................................... 24 0 18 0.06 1 1 0 0 0 0
........................TCCAAGAATCACAAGCATTGGCTGACTCA...................................................................................................................................................................................................... 29 0 18 0.06 1 1 0 0 0 0
......................AATCCAAGAATGACAAGCATTGGCTGA.......................................................................................................................................................................................................... 27 1 18 0.06 1 1 0 0 0 0
......................AATCCAAGAATCACAAGCATTGGCT............................................................................................................................................................................................................ 25 0 18 0.06 1 1 0 0 0 0
.............................................................................................................................................TCTGTTGTGCTCCCAGTTTGTGG....................................................................................... 23 0 18 0.06 1 1 0 0 0 0
.......................................................................................................................TAACTTGCATGTTGGATTTATCTCTGTTG....................................................................................................... 29 0 19 0.05 1 1 0 0 0 0
......................................................................................................................TTAACTTGCATGTTGGATTTATCTCT........................................................................................................... 26 0 19 0.05 1 1 0 0 0 0
.......................................................................................................................TAACTTGCATGTTGGATTTATCTCTGT......................................................................................................... 27 0 19 0.05 1 0 1 0 0 0
..................................................................................................................................................TGTGCTCCCAGTTTGTGGCATTAC................................................................................. 24 0 19 0.05 1 1 0 0 0 0
.............................................................................................................................GCATGTTGGATTTATCTCTGTTGTG..................................................................................................... 25 0 19 0.05 1 1 0 0 0 0
......................................................................................................................TTAACTTGCATGTTGGATTTATCTCTGT......................................................................................................... 28 0 19 0.05 1 1 0 0 0 0
..................................................................................................................................................TGTGCTCCCAGTTTGTGGCATTACA................................................................................ 25 0 19 0.05 1 1 0 0 0 0
.......................................................................................................................TAACTTGCATGTTGGATTTATCTCTG.......................................................................................................... 26 0 19 0.05 1 0 1 0 0 0
......................................................................................................................TTAACTTGCATGTTGGATTTATCTCTG.......................................................................................................... 27 0 19 0.05 1 1 0 0 0 0
.....................................................................................................ATACCCTCTTGTCCATCTTAACTTGC............................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
................................TCACAAGCATTGGCTGACTC....................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
.............................................................................................................TTGTCCATCTTAACTTGCATGTTG...................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.......................................................................................................ACCCTCTTGTCCATCTTAACTTGCAT.......................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
................................................................................................................................TGTTGGATTTATCTCTGTTGTGCTCG................................................................................................. 26 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................TTCCTCTGAATGTCCAAATTT......................................................... 21 0 20 0.05 1 0 0 0 0 1
................................................................................................................................................................................CTCTGAATGTCGAAATTTTTTTTAGCT................................................ 27 1 20 0.05 1 1 0 0 0 0
.............................................................................................................TTGTCCATCTTAACTTGCATGTTGGA.................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
.....................................................TGTTACCCAGGGATCGTGGCC................................................................................................................................................................................. 21 1 20 0.05 1 0 0 0 0 1
................................................ACTCATGTTACCCAGTGATCGTGGCCAC............................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
................................................ACTCATGTTACCCAGCGATCGTGGCCAT............................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
......................................................................................................TACCCTCTTGTCCATCTTAACTTGC............................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
........................................................TACCCAGCGATCGTGGCCACTGCTAA......................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0
.........................................................ACCCAGCGATCGTGGCCACTGCTAA......................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
.....TGTGAATGTAGGCGCCAAATCCAAGAA........................................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
................................................................................................................................TGTTGGATTTATCTCTTTTGTGCTC.................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
................................................ACTCATGTTACCCAGCGATCGTGGCCAC............................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................GATTTATCTCTGTTGTGCTCC................................................................................................. 21 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................GTTGGATTTATCTCTGTTGTGCTCC................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
...........................................................................................................TCTTGTCCATCTTAACTTGCATGTTGGA.................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................CTCTGAATGTCCAAATTTTTT...................................................... 21 0 20 0.05 1 0 0 1 0 0
.................................................CTCATGTTACCCAGCGATCGTG.................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
................................................................................................................................TGTTGGATTTATCTCTGTTGTGCT................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................TTGGATTTATCTCTGTTGTGCTCC................................................................................................. 24 0 20 0.05 1 0 1 0 0 0
..........................................................CCCAGCGATCGTGGCCACTGC............................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
....................................................................................................TATACCCTCTTGTCCATCTTAACTTGC............................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
.............................GAATCACAAGCATTGGCTGAC......................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
....................................................................................................TATACCCTCTTGCCCATCTTAACT............................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................ATTTATCTCTGTTGTGCTCCC................................................................................................ 21 0 20 0.05 1 0 0 0 1 0
..............................................................................................................TGTCCATCTTAACTTGCATGTTGGATT.................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................CATGGTGGATTGACCTCTGT......................................................................................................... 20 3 20 0.05 1 0 0 0 1 0
........................TCCAAGAATCACAAGCATTGGCTGACT........................................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
.......................................................................................................ACCCTCTTGTCGATCTTAACTTGCA........................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
.......................................................................................................ACCCTCTTGTCCATCTTAATTTGC............................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................TGAATGTCCAAATTTTTTTTAGCT................................................ 24 0 20 0.05 1 1 0 0 0 0
.....................................................................................................ATACCCTCTTGTCCATCTTAACTTGCA........................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.....................CAATCCAAGAACCACAAGCATTGGCTG........................................................................................................................................................................................................... 27 2 20 0.05 1 1 0 0 0 0
.....................................................TCTTACCCAGCGATCGTGGCCA................................................................................................................................................................................ 22 1 20 0.05 1 0 0 0 1 0
....................................................ATGTTACCCAGCGATCGTGGCC................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
.CAACTGTGAATGTAGGCGCCAA.................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
................................................ACTCATGTTACCCAGCGATCGTGGCCT................................................................................................................................................................................ 27 1 20 0.05 1 0 1 0 0 0
.....................................................TGTTACCCAGCGATCGTGGCCACT.............................................................................................................................................................................. 24 0 20 0.05 1 0 0 0 1 0
.................................................................................................................................GTTGGATTTATCTCTGTTGTGCTCCC................................................................................................ 26 0 20 0.05 1 0 0 1 0 0
.............................................................................................................TTGTCCATCTTAACTTGCATGTTGGATT.................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0
..........................CAAGAATCACAAGCATTGGCTGAC......................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
................................................................................................................TCCATCTTAACTTGCATGT........................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................ATCGCAGGCATCAAGAGGT................... 19 3 20 0.05 1 1 0 0 0 0
.......................................................................................................ACCCTCTTGCCCATCTTAACTTGCATGT........................................................................................................................ 28 1 20 0.05 1 0 1 0 0 0
................................................................................................................................TGTTGGATTTATCTCTGTTGTGCTCCC................................................................................................ 27 0 20 0.05 1 0 1 0 0 0
..........................................................................................................CTCTTGTCCATCTTAACTTGCATGTTG...................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
........................................................................................................CCCTCTTGTCCATCTTAACTTGCA........................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
..............................................................................................ATCCGCTATACCCTCTTGTCCATCT.................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
GCAACTGTGAATGTAGGCGCCA..................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

CGTTGACACTTACATCCGCGGTTTAGGTTCTTAGTGTTCGTAACCGACTGAGTACAATGGGTCGCTAGCACCGGTGACGATTATAACATCTACGTAGGCGATATGGGAGAACAGGTAGAATTGAACGTACAACCTAAATAGAGACAACACGAGGGTCAAACACCGTAATGTCTAAGGAGACTTACAGGTTTAAAAAAAATCGAAGTACGGAAGTACCGTCCTGAGTTCTCCAGGGATTTTAGGAACCACTA
**********************************************************************************************......................(((((.((((......)))).)))))......******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
........................................................................................TCTACGTAGGCGATATGGGAGAACA.......................................................................................................................................... 25 0 20 9.95 199 72 125 0 0 2
.........................................................................................CTACGTAGGCGATATGGGAGAACA.......................................................................................................................................... 24 0 20 9.95 199 188 0 11 0 0
....GACACTTACATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 27 0 20 4.50 90 56 32 0 2 0
..........................................................GGGTCGCTAGCACCGGTGACGATTAT....................................................................................................................................................................... 26 0 20 4.05 81 75 6 0 0 0
...TGACACTTACATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 28 0 20 3.70 74 61 6 0 7 0
................................................................................................GGCGATATGGGAGAACAGGTAGAAT.................................................................................................................................. 25 0 20 2.75 55 23 32 0 0 0
...TGACACTTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 29 0 20 2.05 41 41 0 0 0 0
.......ACTTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 25 0 20 1.55 31 31 0 0 0 0
...............................................................................................AGGCGATATGGGAGAACAGGTAGAAT.................................................................................................................................. 26 0 20 1.30 26 6 19 1 0 0
......................................................................................................ATGGGAGAACAGGTAGAATTGAACGT........................................................................................................................... 26 0 20 1.25 25 13 12 0 0 0
............................................................GTCGCTAGCACCGGTGACGATTAT....................................................................................................................................................................... 24 0 20 1.05 21 21 0 0 0 0
.........................................................................................CTACGTAGGCGATATGGGAGAAC........................................................................................................................................... 23 0 20 0.90 18 17 0 1 0 0
...TGACACTTACATCCGCGGTTTAGGT............................................................................................................................................................................................................................... 25 0 20 0.85 17 16 1 0 0 0
................................................................................................GGCGATATGGGAGAACAGGTAGAATT................................................................................................................................. 26 0 20 0.85 17 17 0 0 0 0
....GACACTTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 28 0 20 0.75 15 0 13 0 2 0
...TGACACTTACATCCGCGATTTAGGTTCT............................................................................................................................................................................................................................ 28 1 20 0.70 14 14 0 0 0 0
.....................................TCGTAACCGACTGAGTACAATGGGT............................................................................................................................................................................................. 25 0 20 0.65 13 9 4 0 0 0
............................................................................................................................................................................................................GTACGGAAGTACCGTCCTGAGTTCT...................... 25 0 17 0.65 11 8 3 0 0 0
.......................................................................................ATCTACGTAGGCGATATGGGAGAACA.......................................................................................................................................... 26 0 8 0.63 5 3 1 0 1 0
.................................................................................................GCGATATGGGAGAACAGGTAGAATT................................................................................................................................. 25 0 20 0.60 12 6 6 0 0 0
........CTTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 24 0 20 0.55 11 11 0 0 0 0
.........................................................................................CTACGTAGGCGATATGGGAGAACAGGT....................................................................................................................................... 27 0 20 0.55 11 4 7 0 0 0
...TGACACTTACATCCGCGATTTAGGTTCTT........................................................................................................................................................................................................................... 29 1 20 0.45 9 8 0 1 0 0
..................................................................................................CGATATGGGAGAACAGGTAGAAT.................................................................................................................................. 23 0 20 0.40 8 2 6 0 0 0
........................................................................................TCTACGTAGGCGATATGGGAGAAC........................................................................................................................................... 24 0 20 0.40 8 8 0 0 0 0
........................................................................................................GGGAGAACAGGTAGAATTGAACGT........................................................................................................................... 24 0 20 0.40 8 4 4 0 0 0
...........................................................GGTCGCTAGCACCGGTGACGATTAT....................................................................................................................................................................... 25 0 20 0.35 7 0 7 0 0 0
....GACACTTACATCCGCGGTTTAGGTTC............................................................................................................................................................................................................................. 26 0 20 0.35 7 7 0 0 0 0
.......................................................................................................TGGGAGAACAGGTAGAATTGAACGT........................................................................................................................... 25 0 20 0.35 7 4 3 0 0 0
.................................................................................................................GGTAGAATTGAACGTACAACCTAAAT................................................................................................................ 26 0 20 0.35 7 7 0 0 0 0
....................................................................................................................AGAATTGAACGTACAACCTAAATAG.............................................................................................................. 25 0 20 0.35 7 6 1 0 0 0
.....ACACTTACATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 26 0 20 0.35 7 4 3 0 0 0
............................................................................................................................................................................................TTTAAAAAAAAACGAAGTAGGTAAG...................................... 25 3 3 0.33 1 0 0 1 0 0
............................................................GTCGCTAGCACCGGTGACGATTATAA..................................................................................................................................................................... 26 0 20 0.30 6 5 1 0 0 0
.....ACACTTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 27 0 20 0.30 6 5 1 0 0 0
..........................................................................................TACGTAGGCGATATGGGAGAACA.......................................................................................................................................... 23 0 20 0.25 5 0 5 0 0 0
...TGACACTTACATCCGCGGTTTAGGTTC............................................................................................................................................................................................................................. 27 0 20 0.25 5 4 1 0 0 0
........................................................................................................GGGAGAACAGGTAGAATTGAACGTA.......................................................................................................................... 25 0 20 0.25 5 1 4 0 0 0
...............................................................................................AGGCGATATGGGAGAACAGGTAGAATT................................................................................................................................. 27 0 20 0.25 5 2 3 0 0 0
..............................................................CGCTAGCACCGGTGACGATTATAACAT.................................................................................................................................................................. 27 0 8 0.25 2 2 0 0 0 0
.................................................................................................GCGATATGGGAGAACAGGTAGAAT.................................................................................................................................. 24 0 20 0.25 5 2 3 0 0 0
.........................................................................................................................TGAACGTACAACCTAAATAGAGACAA........................................................................................................ 26 0 19 0.21 4 0 2 2 0 0
..................................................................................................CGATATGGGAGAACAGGTAGAATT................................................................................................................................. 24 0 20 0.20 4 4 0 0 0 0
......................................................CAATGGGTCGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 27 0 20 0.20 4 4 0 0 0 0
...................................GTTCGTAACCGACTGAGTACAAT................................................................................................................................................................................................. 23 0 20 0.20 4 4 0 0 0 0
.........TTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 23 0 20 0.20 4 4 0 0 0 0
................................................................................................GGCGATATGGGAGAACAGGTAGAA................................................................................................................................... 24 0 20 0.20 4 2 2 0 0 0
................CGCGGTTTAGGTTCTTAGTGTTCGT.................................................................................................................................................................................................................. 25 0 16 0.19 3 3 0 0 0 0
.......................................................AATGGGTCGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0
..............................................................CGCTAGCACCGGTGACGATTATAA..................................................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0
........CTTACATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 23 0 20 0.15 3 3 0 0 0 0
...............................................CTGAGTACAATGGGTCGCTAGCACCGGT................................................................................................................................................................................ 28 0 20 0.15 3 3 0 0 0 0
..........................................................GGGTCGCTAGCACCGGTGACGATTA........................................................................................................................................................................ 25 0 20 0.15 3 3 0 0 0 0
.....................................................................................................TATGGGAGAACAGGTAGAAT.................................................................................................................................. 20 0 20 0.15 3 0 2 1 0 0
................................AGTGTTCGTAACCGACTGAGTACAAT................................................................................................................................................................................................. 26 0 20 0.15 3 3 0 0 0 0
......CACTTACATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 25 0 20 0.15 3 3 0 0 0 0
............................................................................................................................................................................................................GTACGGAAGTACCGTCCTGAGTTCTC..................... 26 0 14 0.14 2 1 1 0 0 0
....GACACTTACATCCGCGGTTTAGGTTCTTA.......................................................................................................................................................................................................................... 29 0 14 0.14 2 2 0 0 0 0
..............................................................CGCTAGCACCGGTGACGATTATAACA................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0 0
.......................................................................................ATCTACGTAGGCGATATGGGAG.............................................................................................................................................. 22 0 8 0.13 1 0 1 0 0 0
.......................................................................................AGCTACGTAGGCGATATGGGAGAACA.......................................................................................................................................... 26 1 8 0.13 1 1 0 0 0 0
.............................................................TCGCTAGCACCGGTGACGATTATAACAT.................................................................................................................................................................. 28 0 8 0.13 1 1 0 0 0 0
.....................................................................................ACATCTACGTAGGCGATATGGGAG.............................................................................................................................................. 24 0 8 0.13 1 0 1 0 0 0
......................................................................................CATCTACGTAGGCGATATAGGAGAACA.......................................................................................................................................... 27 1 8 0.13 1 0 1 0 0 0
....................................................................................AACATCTACGTAGGCGATATGGGAG.............................................................................................................................................. 25 0 8 0.13 1 0 1 0 0 0
.................................................................................TATAACATCTACGTAGGCGATATG.................................................................................................................................................. 24 0 8 0.13 1 0 1 0 0 0
......................................................................................CATCTACGTAGGCGATATGGGAGAACA.......................................................................................................................................... 27 0 8 0.13 1 0 0 1 0 0
...........................................................................GACGATTATAACATCTACGTAGGCGAT..................................................................................................................................................... 27 0 8 0.13 1 0 0 1 0 0
...............................................................GCTAGCACCGGTGACGATTATAACAT.................................................................................................................................................................. 26 0 8 0.13 1 0 1 0 0 0
......................................................................................GATCTACGCAGGCGATATGGGAGAACA.......................................................................................................................................... 27 2 9 0.11 1 1 0 0 0 0
......................................................................................CAGCTACGCAGGCGATATGGGAGAACA.......................................................................................................................................... 27 2 9 0.11 1 0 0 1 0 0
......................TTAGGTTCTTAGTGTTCGTAACCGACTG......................................................................................................................................................................................................... 28 0 18 0.11 2 2 0 0 0 0
.............................................................................................................................CGTACAACCTAAATAGAGACAACAC..................................................................................................... 25 0 19 0.11 2 0 0 2 0 0
..........................................................................................TACGTAGGCGATATGGGAGAAC........................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0
...................................GTTCGTAACCGACTGAGTACAATGG............................................................................................................................................................................................... 25 0 20 0.10 2 1 1 0 0 0
..............................................................................................................................................................................AGGAGGCTTACAGGTTTAAAA........................................................ 21 1 20 0.10 2 0 1 0 1 0
...........................................................................................................................................GGAGACAACACGAGGGTCAAAC.......................................................................................... 22 1 20 0.10 2 1 0 0 0 1
.........................................................TGGGTCGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
....GACACTTACATCCGCGGTTTAGGT............................................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
..............................................................CGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0
...................................GTTCGTAACCGACTGAGTACAATGGGT............................................................................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0
.....ACACTTACATCCGCGGTTTAGGTT.............................................................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0
....GACACTTACATCCGCGGTTTAGGTT.............................................................................................................................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0
......CACTTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 26 0 20 0.10 2 0 2 0 0 0
..................................................................................................................GTAGAATTGAACGTACAACCTAAAT................................................................................................................ 25 0 20 0.10 2 1 1 0 0 0
.....ACACTTACATCCGCGATTTAGGTTCT............................................................................................................................................................................................................................ 26 1 20 0.10 2 2 0 0 0 0
............................................CGACTGAGTACAATGGGTCGCTAGCAC.................................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0
.......................................................................................................TGGGAGAACAGGTAGAATTGAACGTA.......................................................................................................................... 26 0 20 0.10 2 0 1 1 0 0
.....ACACTTACATCCGCGATTTAGGTTCTT........................................................................................................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0
...TGACACTTACATCCGCGGTTTAGG................................................................................................................................................................................................................................ 24 0 20 0.10 2 2 0 0 0 0
..............................................................................................................ACAGGTAGAATTGAACGTACAACCTAAAT................................................................................................................ 29 0 20 0.10 2 2 0 0 0 0
..........................................................GGGTCGCTAGCACCGGTGACGATT......................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
..TTGACACTTACATCCGCGGTTTAGGT............................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
......................................................................................................ATGGGAGAACAGGTAGAATTGAAC............................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0
..................................................AGTACAATGGGTCGCTAGCACCGGT................................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0
..........TACATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0
.....................................................................................AAATCTACGCAGGCGATATGGGATAACA.......................................................................................................................................... 28 3 10 0.10 1 1 0 0 0 0
.................................................................................................................GGTAGAATTGAACGTACAACCTAAATAG.............................................................................................................. 28 0 20 0.10 2 2 0 0 0 0
.............ATCCGCGGTTTAGGTTCTTAGTGTTCGT.................................................................................................................................................................................................................. 28 0 14 0.07 1 1 0 0 0 0
.............................................................................................................................................AGACAACACGAGGGTCAAACACCGT..................................................................................... 25 0 14 0.07 1 0 1 0 0 0
.............ATCCGCGGTTTAGGTTCTTAGTGT...................................................................................................................................................................................................................... 24 0 15 0.07 1 0 1 0 0 0
...........................................................................................................................................................................................................................CCTGAGTTCTCCAGGGATTTTAGGAA...... 26 0 16 0.06 1 0 1 0 0 0
..............................................................................................................................................................................................................................GAGTTCTCCAGGGATTTTAGGAACCACT. 28 0 16 0.06 1 1 0 0 0 0
..............................................................................................................................................GACAACACGAGGGTCAAACACCGTAAT.................................................................................. 27 0 16 0.06 1 0 1 0 0 0
...........ACATCCGCGGTTTAGGTTCTTAG......................................................................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0 0
..............................................................................................................................................................................................................................GAGTTCTCCAGGGATTTTAGGAACCA... 26 0 16 0.06 1 1 0 0 0 0
................CGCGGTTTAGGTTCTTAGTGTTCG................................................................................................................................................................................................................... 24 0 16 0.06 1 1 0 0 0 0
........................................................................................................................................................................TGTCTAAGGAGACTTACAGGT.............................................................. 21 0 16 0.06 1 0 1 0 0 0
.......................................................................................................................................................................ATGTCTAAGGAGACTTACAGG............................................................... 21 0 16 0.06 1 1 0 0 0 0
.................................................................................................................................CAACCTAAATAGAGACAACTCGAGGGT............................................................................................... 27 1 16 0.06 1 0 1 0 0 0
............................................................................................................................................................................................................GTACGGAAGTACCGTCCCGAGTTCT...................... 25 1 17 0.06 1 1 0 0 0 0
.............................................................................................................................................................................................................TACGGAAGTACCGTCCTGAGT......................... 21 0 17 0.06 1 1 0 0 0 0
..................CGGTTTAGGTTCTTAGTGTTCGT.................................................................................................................................................................................................................. 23 0 17 0.06 1 1 0 0 0 0
................................................................................................................................................CAACACGAGGGTCAAACACCGT..................................................................................... 22 0 18 0.06 1 0 1 0 0 0
..................................................................................................................................................................................................................................TCTCCAGGGATTTTAGGAACCACT. 24 0 18 0.06 1 1 0 0 0 0
............................................................................................................................ACGTACAACCTAAATAGAGACAA........................................................................................................ 23 0 19 0.05 1 0 1 0 0 0
.........................................................................................................................TGAACGTACAACCTAAATAGAGACAAC....................................................................................................... 27 0 19 0.05 1 0 1 0 0 0
.............................................................................CGATTATAACATCTACGCAGGCGAT..................................................................................................................................................... 25 1 19 0.05 1 1 0 0 0 0
..........................................................................................................................GAACGTACAACCTAAATAGAGACA......................................................................................................... 24 0 19 0.05 1 1 0 0 0 0
.........................................................................................................................TGAACGTACAACCTAAATAGAGACAACA...................................................................................................... 28 0 19 0.05 1 1 0 0 0 0
...........................................................................................................................AACGTACAACCTAAATAGAGACAA........................................................................................................ 24 0 19 0.05 1 1 0 0 0 0
........CTTACATCCGCGGTTTAGGTTC............................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
........CTTACATCCGCGTTTTAGGTTCTT........................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0
.........................................................................................................GGAGAACAGGTAGAATTGAACGTA.......................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
....AACACTTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
.GTTGACACTTACATCCGCGGTTTAGGTT.............................................................................................................................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................GACAACACGAGGGTCAAACGC........................................................................................ 21 1 20 0.05 1 0 0 0 0 1
......................................................................................................ATGGAAGAACAGGTAGAATTGAACGT........................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
......................................................................................................ATGGGAGAACAGGTAGAAT.................................................................................................................................. 19 0 20 0.05 1 0 1 0 0 0
............................TCTTAGTGTTCGTAACCGACTGAGTACA................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
............................................................................................CGTAGGCGATATGGGAGAACA.......................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
...........ACATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0
....................................................................................................................AGAATTGAACGTACAACCTAAATA............................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.............................................................TCGCTAGCACCGGTGACGATTATAA..................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
...........................................................GGTCGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0
......................................................................................................ATGGGAGAACAGGTAGAATTGAACG............................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................TGAACGTACAACCTAAATAG.............................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
.....................................................ACAATGGGTCGCTAGCACCGGTGAC............................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0
.............................................................................................ATAGGCGATATGGGAGAAGAGGTAGAAT.................................................................................................................................. 28 2 20 0.05 1 1 0 0 0 0
...................................................................................................GATATGGGAGAACAGGTAGAATTGA............................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
..............................................................................................TAGGCGATATGGGAGAACA.......................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
...GGACACTTACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 29 1 20 0.05 1 1 0 0 0 0
......................................................CTATGGGTCGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
..........................................................GGGTCGCTAGCACCGGTGACGA........................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
..............................................ACTGAGTACAATGGGTCGCTAGCACCGG................................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0
....................................................................................................GTATGGCAGGACAGGTAG..................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0
...................................................................................................GATATGGGAGAACAGGTAGAAT.................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................AGGAGACTTACAGGTTTAAAA........................................................ 21 0 20 0.05 1 1 0 0 0 0
.............................................................................................GTAGGCGATATGGGAGAACA.......................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
......CACTTACATCCGCGATTTAGGTTCT............................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0
.........................................................................................CTTCGTAGGCGATATGGGAGAACA.......................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
...................................GTTCTTAACCGACTGAGTACAAT................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0
....................................................................................................ATATGGGGCAACATGTAGA.................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0
...TGACACTTACATCCGCGATTTAGGTTC............................................................................................................................................................................................................................. 27 1 20 0.05 1 0 0 0 0 1
............................................................................................................GAACAGGTAGAATTGAACGTACAACC..................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
...................................................................................................................TAGAATTGAACGTACAACCTAAAT................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
.....................................................................................................TATGGGAGAACAGGTAGAATT................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0
.........................................................................................CTACGTAGGCGATACGGGAGAACA.......................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
..................................................................................................CGATATGGGAGAACAGGTAGAAC.................................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................AGGAGACTTACAGGTTTAAA......................................................... 20 0 20 0.05 1 0 0 0 1 0
.....................................................................................................TATGGGAGAACAGGTAGAGT.................................................................................................................................. 20 1 20 0.05 1 0 1 0 0 0
.............ATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0
........................................................................................TCTACGTAGGCGATATGGGAGA............................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
.......................................................AATGGGTCGCTAGGACCGGTGACG............................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0
..............................................................CGCTAGCACCGGTGACGATTATAAC.................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
................................................................................................GGCGATATGGGCGAACAGGTAGAAT.................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
.......................................................................................................TGGGAGAACAGGTAGAATTGAA.............................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
..................................................................................................CGATATGGGAGAACAGGTAGAA................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0
......................................................................................................ATGGGAGAACAGGTAGAATTGAACGTA.......................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
........................................................ATGGGTCGCTAGCACCGGTGACGATT......................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
CGTTGACACTTACATCCGCGGTTTAGG................................................................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0
...........................................................GGTCGCTAGCACCGGTGACGATT......................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
....GAAACTTACATCCGCGATTTAGGTTCT............................................................................................................................................................................................................................ 27 2 20 0.05 1 0 1 0 0 0
....................................................................................................ATATGGGAGAACAGGTAGAAT.................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0
................................................................................................GGCGATACGGGAGAACAGGTAGAAT.................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
............................................................................................................GAACAGGTAGAATTGAACGTA.......................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
............................................................GTCGCTAGCACCGGTGACGATT......................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
.....................................TCGTAACCGACTGAGTACAATGGG.............................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
........................................................................................TCTACGTAGGCGATGTGGGAGAACA.......................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0
.................................................................................................GCGATATGGGAGAACAGGTAGAATTG................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................GAGACTTACAGGTTTGGAAAA...................................................... 21 2 20 0.05 1 0 1 0 0 0
....GACACTTACATCCGCGGTTTAGTTTCT............................................................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0
..GTGACACTTACATCCGCGGTTTAGGTT.............................................................................................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
.........................................................................................................GCAGAACAGGTAGAATAGA............................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0
..........TACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
........................................................................................................GGGAGAACAGGTAGAATT................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0
........................................................ATGGGTCGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0
...............................................................................................AGGCGATATGGGAGGACAGGTAGAAT.................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................GGAGACTTACAGGTTTAAAAA....................................................... 21 0 20 0.05 1 1 0 0 0 0
...............................................................GCTAGCACCGGTGACGATTATAA..................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
...............................................................................................................CAGGTAGAATTGAACGTACAACCTAAA................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0
...GGACACTTACATCCGCGGTTTAGGTTCT............................................................................................................................................................................................................................ 28 1 20 0.05 1 0 0 0 1 0
...............................................................................................AGGCGATATGGGAGAACA.......................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
....GACACTTACATCCGCGATTTAGGTTCTT........................................................................................................................................................................................................................... 28 1 20 0.05 1 0 0 1 0 0
.........................................................................................CTACGTAGGCTATATGGGAGAACA.......................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
............................................................TTCGCTAGCACCGGTGACGATTATAA..................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
.GTTGACACTTACATCCGCGGTTTAGG................................................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................GGTGACACGAGGGTCAAACACC....................................................................................... 22 3 20 0.05 1 1 0 0 0 0
.........................................................................................CTACGTAGGCGATATGGTAGAACA.......................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
.............................................................................................GTAGGCGATATGGGAGAATA.......................................................................................................................................... 20 1 20 0.05 1 0 1 0 0 0
................................................................................................TGCGATATGGGAGAACAGGTAGAATT................................................................................................................................. 26 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................TGAACGTACAACCTAAAT................................................................................................................ 18 0 20 0.05 1 0 1 0 0 0
........................................................ATGGGCCGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0
............................................................GTCGCTAGCACCGGTGACGAT.......................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
...........ACATCCGCGGTTTAGGTTCTT........................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
..ATGACACTTACATCCGCGGTTTAGGT............................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................ACCGTAATGTCGAAGGAGACTTA................................................................... 23 1 20 0.05 1 1 0 0 0 0
.................................................................................................................GGTAGAATTGAACGTACAACC..................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
.......................................................................................................TGGGAGAACAGGTAGAATTGAACG............................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................GCCGTAATGTCGAAGGAGGCTTA................................................................... 23 3 20 0.05 1 0 0 0 1 0
..............................................................CGCTAGCACCGGTGACGATTA........................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0
.......................TAGCTTCTTAGTTTTCGTTAC............................................................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0
.........................................................................................................GGAGAACAGGTAGAATTGAACGT........................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0
....................................TTCGTAACCGACTGAGTACAATGGGT............................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0
.................................................................................................GCGATATGGAAGAACAGGTAGAATT................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
......................................................................................................ATGGGAGAACAGGTAGAATT................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0
...............................................CTGAGTACAATGGGTCGCTAGCACCG.................................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
..............................................................................................AAGGCGATATGGGAGAACAGGTAGAA................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
...TGACACTTACATCCGCGATTTAGGTT.............................................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0
.....................................TCGTAACCGACTTAGTACAATGGGT............................................................................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0
....GACACTTACATCCGCGGTTTA.................................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
..................................TGTTCGTAACCGACTGAGTACAATGGGT............................................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................AGACTTACAGGTTTAAAAAAA..................................................... 21 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................GGAGACTTACAGGTTTAAA......................................................... 19 0 20 0.05 1 0 0 0 1 0
........................................................................................TTTACGTAGGCGATATGGGAGAACA.......................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0
......CACTTACATCCGCGATTTAGGTTCC............................................................................................................................................................................................................................ 25 2 20 0.05 1 0 1 0 0 0
....GACACTTACATCCGCGTTTTAGGTTCT............................................................................................................................................................................................................................ 27 1 20 0.05 1 0 1 0 0 0
.........................................................TGGGTCGCTAGCACCGGTGACGATTA........................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0
.....................................................................................................TATGGGAGAACAGGTAGAATTGAACGT........................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
........................................................................................TCTACGTAGGCGAGATGGGAGAACA.......................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0
................................................TGAGTACAATGGGTCGCTAGCACCG.................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
.........................................................................................................GGAGAACAGGTAGAATTGAAC............................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000003862:516-766 - dwi_301 GCAACTGTGAATGTAGGCGCCA-AATCCAAGAATCACAAGCATTGGCTGACTCATGTTACCCAGCGATCGTGGCCACTGCTAATATTGTAGATGCATCCGCTATACCCTCTTGTCCATCTTAACTTGCATGTTGGATTTATCTCTGTTGTGCTCCCAGTTTGTGGCATTACAGATTCCTCTGAATGTCCAAATTTTTTTTAGCTT------------------------------------CATGCCTTCATGGCAGGAC-TCAAGAGG--------------------------------T------------CCCTAAAATCCTT--------------------------------------------------------------------------------------------------------------------------------GGT-GAT
droVir3 scaffold_12958:1061101-1061313 + AGC-----------AGAG-CCA-GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAAAAATGAAAAATAATTTG-CTGTACTCTGAT------------T-GTAGCTTTATCGCGTCATTGGCTATAGCAGCAGCAATAGCACAACATGAAATAAGGTACTCTGCGTAGCCGTAGAGGTAGCTGAA-AGCTGATAGCGAGA-TGAGAGCAGAGCAAATGAAATTGTT--T-CATTTGCTAC-GGCTACTGTG------CGC------TTT----TATTCAT--T-----------------TTG-TTC
droMoj3 scaffold_6541:1557502-1557760 + AACGGCTACGTAGCATAG-CAGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAACAAC-AAAACGAATGCTCTTCTGCTCTGCT------------CCATAGCA-TAGAACATCGGAGCAAAGAGCAATAGCAAAAGCAAAAAAT-TTGCGATCCGTTATTTGTAGTTGTAGCAATAGCACAAGCATTGACAGCAAGA-TGAGAGCAAAGCAAATGAAAAAAACAATT--TTTGCTAC-TGCTACGGAGCATTGGCATTGTTTTCC-TCTTTTCCTTTTCTGTTGC--TTTCGTAGTTGCTCTCG
droGri2 scaffold_15245:15112783-15112945 + GAGAGC--AATAGCAAAC-CCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAAAATT-GAAATAAATGCTCTTTTGCACTGCT------------CTGAT--------------------CTGTCAAGAACAATAGCAAAAACATTTCCATTGTGCTCTCTGTAGTTGTAGCAATAGCAGAAAGAATAATAATAAAT-ATAATATA-AATAAATAA-TATAA---AT-----------------------------------------------------------------------------
dp5 Unknown_singleton_1494:6459-6505 - CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTTATCTCCGGTC-TTAGGAAG--------------------------------C------------CGTTGAGAGCGGT--------------------------------------------------------------------------------------------------------------------------------TGT-GTT
droAna3 scaffold_12794:365-414 - CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCATTCATTGCAGGGC-TTAAAAGA--------------------------------C------------CACTCAAGTCACT--------------------------------------------------------------------------------------------------------------------------------CGT-GCT
droBip1 scf7180000395585:25238-25478 + ATCGGCTCTGT-GCATAG-CAGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAA-AATCAAAACGGCTGCT-CTTTGCTCTGCT------------CTGTAGCA-CTGAACGTCGGAGCACGGAGCAATAGCAATAGCAAGAAAATGCGCGACACGCTATTTGTAGTTGTAGCAATAGCACAAGCATCGACAGTGAGA-TGAGAGCAGAGCCAAAGAAAATAAT--ATTGT--GCT------CTCGTAGCAACTGCATAGTCGCTC-TC------------GTAGCAACTACGTAGTCACTCTGG
droKik1 scf7180000300033:5966-6192 + ACGAGAGCCGTAACAGAG-CCG-TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAGAACGGCAAAGCCTATG-CTCTGCTCTGCT------------C-GTAGTTTTCTCGGATCAAAAACTACGGCTATAGCTATAGCAAAAAATAAATAGCAGTGCTCTGCGTAGCCGTAGCCGTAGCAAAA-AATTGAGAGCGAGA-TGAAAGCAGAGCAAAAGGAGTTTCG--T-CATATGCTACCTGCTGTCGCG------TGC------CCC----CGTTTCTCTC-----------------TCT-TTC
droFic1 scf7180000451467:468-708 + ATTGGCTCTGTAGCATAG-CAG-AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCACAAAATCAAAACGGCTGCT-CTCTGCTCTGCT------------CTGTAGCA-CCAAACGTCGGAGCACGGAGCAATAGCAATAGCAAGAAAGTGTGCGACACGCTATTTGTAGTTGTAGCAATAGCACAAGCATCGACAGCGAGT-TGAAAGCAGAGCCAACGAAAAGAA---ATTGT--GCT------TTCGTAGCAACTGCATAGTCACTC-TC------------GTTGCAACTACGTAGTCGCTCTTG
droEle1 scf7180000490557:19887-19960 + ACGAGAGCCGGATCAGAG-AAT-TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAACAACGAAAATGTATTTG-CTCTGCTCTGC--------------------------------------------------------------------------CCTGCGTAGTCGTAGCA-----------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000767504:17713-17941 + ATCGGCTCTGTAGCAAG--CAGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAAAAGC-AAAACGGTTGCTTTTCTGCTCTGCT------------CTGTAGCA-CAGAACGTCGGAGTACAGAGCAATAGCAATAGCAAAAAAT-GCGCGACATACTATTTGTAGTTGTAGCTATAGCACAAGCATCGACAGCGAGAATGAGAGCAAAGCGAACGAAAATAAT-----------------------AGCAACTCTGTTTTTGCTC-TC------------GTAGCAGCTGCGTAGTTGCTCTCA
droBia1 scf7180000302179:20892-20944 - TAGGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGCTTTTATTGCAGGGC-TCAAGAAA--------------------------------C------------CGCTCAAATCGAT--------------------------------------------------------------------------------------------------------------------------------GGT-GCT
droTak1 scf7180000415438:150544-150714 + ACGAGAGCCGTAGCAGAG-CCA-TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAGTAACGAGAAAGTTTGTG-CTCTGCTCTGCT------------C-GTAGTTTTGTCGCTTCAGAAACTGTAGCAATAGCGGTAGCAGAAAATCCAGTCCTGTGCTCTGTGTAGCAGTAACGGTAGCAAAA-AATTGATAGCGAGA-TGAGAGCAGAGCA---------------------------------------------------------------------------------------------
droEug1 scf7180000407985:15603-15827 + AGCG-----GGAGCAGAG-CCG-AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAAAACGAAAACTGATCAA-CTCTGCTCTGCT------------CCGAGCT-ACAAAAAGTTCAGAGCTATAGCTATAGCAATAGCAGAAAATAATATTCTGTGCTCCGCGTAGCCGTAGCCGTATA-CGAAAATTGAGAGCGAGA-TCAGAGCAGAGCAAAAGATATTTTT--A-TTGGTGCTAC-GGCTCTCGGG------TAT------ATTCCTTCGGCTTTTCT-----------------GCT-TCT
dm3 chr3LHet:1620396-1620445 - CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGCC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTT
droSim2 node_44627:78-127 - CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCTTTTATTTCAGGGC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTT
droSec2 scaffold_436:42547-42596 - CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGTC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTT
droYak3 v2_chrUn_001:292606-292656 - GCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGTTTTCGTCTCAGGAT-TAAAAAAA--------------------------------T------------CTCTAAAGTGGGC--------------------------------------------------------------------------------------------------------------------------------GGT-CTT
droEre2 scaffold_3002:1638-1687 - CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCCGGCC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GCAACTGTGAATGTAGGCGCCA-AATCCAAGAATCACAAGCATTGGCTGACTCATGTTACCCAGCGATCGTGGCCACTGCTAATATTGTAGATGCATCCGCTATACCCTCTTGTCCATCTTAACTTGCATGTTGGATTTATCTCTGTTGTGCTCCCAGTTTGTGGCATTACAGATTCCTCTGAATGTCCAAATTTTTTTTAGCTT------------------------------------CATGCCTTCATGGCAGGAC-TCAAGAGG--------------------------------T------------CCCTAAAATCCTT--------------------------------------------------------------------------------------------------------------------------------GGT-GATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................ACTCATGTTACCCAGCGATCGTGG.....................................................................................................................................................................................................................................................................................................................................................................................................24202.4549048100
.................................................................................................................................................................................CTCTGAATGTCCAAATTTTTTTTAGCTT------------------------------------.............................................................................................................................................................................................................................28202.4549000490
........................................................................................................ACCCTCTTGTCCATCTTAACTTG...............................................................................................................................................................................................................................................................................................................................................23201.3026026000
........................................................................................................ACCCTCTTGTCCATCTTAACTTGCA.............................................................................................................................................................................................................................................................................................................................................25201.1523023000
........................................................................................................ACCCTCTTGTCCATCTTAACTTGC..............................................................................................................................................................................................................................................................................................................................................24201.1022022000
....................................................................................................................................TGGATTTATCTCTGTTGTGCTCCCAG................................................................................................................................................................................................................................................................................................................26161.0016016000
........................................................................................................ACCCTCTTGTCCATCTTAACTTGCATGT..........................................................................................................................................................................................................................................................................................................................................28200.8517014030
...................................................TCATGTTACCCAGCGATCGTGGCCAC.................................................................................................................................................................................................................................................................................................................................................................................................26200.7515015000
....................................................................................................CTATACCCTCTTGTCCATCTTAACT.................................................................................................................................................................................................................................................................................................................................................25200.7014000140
.................................................................................................................................TGTTGGATTTATCTCTGTTGTGCTC....................................................................................................................................................................................................................................................................................................................25200.6012000120
...................................................TCATGTTACCCAGCGATCGTGGCCA..................................................................................................................................................................................................................................................................................................................................................................................................25200.5010010000
..........................................................................................................................................TATCTCTGTTGTGCTCCCAGTTTGTGG.........................................................................................................................................................................................................................................................................................................27170.35603030
....................................................................................................................................TGGATTTATCTCTGTTGTGCTCCCA.................................................................................................................................................................................................................................................................................................................25170.35606000
...................................................TCATGTTACCCAGCGATCGTGGCC...................................................................................................................................................................................................................................................................................................................................................................................................24200.35707000
.....................................................................................................................................GGATTTATCTCTGTTGTGCTCCCAG................................................................................................................................................................................................................................................................................................................25160.31505000
....................................................................................................................................TGGATTTATCTCTGTTGTGCTCCCAGT...............................................................................................................................................................................................................................................................................................................27160.31505000
........................................................................................................ACCCTCTTGTCCATCTTAACTTGCATG...........................................................................................................................................................................................................................................................................................................................................27200.30606000
.............................................................................................................................TGCATGTTGGATTTATCTCTGTTG.........................................................................................................................................................................................................................................................................................................................24190.26502030
.......................................................................................................................TTAACTTGCATGTTGGATTTATCTC..............................................................................................................................................................................................................................................................................................................................25190.26505000
.............................................................................TGCTAATATTGTAGATGCATCCGC.........................................................................................................................................................................................................................................................................................................................................................................2480.25201010
.............................................................................TGCTAATATTGTAGATGCATCCGCTA.......................................................................................................................................................................................................................................................................................................................................................................2680.25201010
.........................................................................................................................................TTATCTCTGTTGTGCTCCCAGTTTG............................................................................................................................................................................................................................................................................................................25170.24404000
.......................AATCCAAGAATCACAAGCATTGGCTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................28180.17303000
.......................AATCCAAGAATCACAAGCATTG.................................................................................................................................................................................................................................................................................................................................................................................................................................22180.17302100
.......................AATCCAAGAATCACAAGCATTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................24180.17303000
.............................................................................................................................TGCATGTTGGATTTATCTCTGTTGTG.......................................................................................................................................................................................................................................................................................................................26190.16300030
.....TGTGAATGTAGGCGCCA-AATCCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300030
......................................................TGTTACCCAGCGATCGTGGCCAC.................................................................................................................................................................................................................................................................................................................................................................................................23200.15303000
.........................................................TACCCAGCGATCGTGGCCACTGCTA............................................................................................................................................................................................................................................................................................................................................................................................25200.15330000
...................................................................................................................................................................................................................................................TGCCTTCATGGCAGGAC-TCAAGAGG--------------------------------.................................................................................................................................................................25150.13201010
......................................................................................................................................GATTTATCTCTGTTGTGCTCCCAGTTTG............................................................................................................................................................................................................................................................................................................28160.13201010
.....................................................................................................................................GGATTTATCTCTGTTGTGCTCCCAGTT..............................................................................................................................................................................................................................................................................................................27160.13202000
...........................................................................ACTGCTAATATTGTAGATGCATCC...........................................................................................................................................................................................................................................................................................................................................................................2480.13101000
...............................................................................CTAATATTGTAGATGCATCCGCTA.......................................................................................................................................................................................................................................................................................................................................................................2480.13101000
.....................................................................................TTGTAGATGCATCCGCTATACCCTCT...............................................................................................................................................................................................................................................................................................................................................................2680.13101000
....................................................................................................................................TGGATTTATCTCTGTTGTGCTCCCAGTT..............................................................................................................................................................................................................................................................................................................28160.13202000
...........................................................................................................................................................................................................................................................TGGCAGGAC-TCAAGAGG--------------------------------T------------CCC.................................................................................................................................................21170.12202000
.....................A-AATCCAAGAATCACAAGCATTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................25170.12202000
.....................................................................................................................................GGATTTATCTCTGTTGTGCTCCCA.................................................................................................................................................................................................................................................................................................................24170.12202000
........................................................................................................................................TTTATCTCTGTTGTGCTCCCAGTTTG............................................................................................................................................................................................................................................................................................................26170.12202000
..................................................................................................................................................................TGGCATTACAGATTCCTCTGAATG....................................................................................................................................................................................................................................................................................2490.11101000
.......................AATCCAAGAATCACAAGCATTGGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................26180.11202000
.......................AATCCAAGAATCACAAGCATTGG................................................................................................................................................................................................................................................................................................................................................................................................................................23180.11202000
...................................................TCATGTTACCCAGCGATCGTGGCCACTGC..............................................................................................................................................................................................................................................................................................................................................................................................29200.10202000
....................................................................................................CTATACCCTCTTGTCCATCTTAAC..................................................................................................................................................................................................................................................................................................................................................24200.10200020
....................................................................................................................................TGGATTTATCTCTGTTGTGCTCC...................................................................................................................................................................................................................................................................................................................23200.10200020
............................................GGCTGACTCATGTTACCCAGCGATCG........................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
................................................................................................................................ATGTTGGATTTATCTCTGTTGTGC......................................................................................................................................................................................................................................................................................................................24200.10200020
.....................................................................................................TATACCCTCTTGTCCATCTTAACT.................................................................................................................................................................................................................................................................................................................................................24200.10202000
..................................................CTCATGTTACCCAGCGATCGTGG.....................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
.................................................ACTCATGTTACCCAGCGATCGTGGCCA..................................................................................................................................................................................................................................................................................................................................................................................................27200.10200020
.......................................................................................................TACCCTCTTGTCCATCTTAACTTGCA.............................................................................................................................................................................................................................................................................................................................................26200.10202000
...............................................................................................................................CATGTTGGATTTATCTCTGTTGTGC......................................................................................................................................................................................................................................................................................................................25200.10200020
.................................................................................................................TCCATCTTAACTTGCATGTTGGATT....................................................................................................................................................................................................................................................................................................................................25200.10202000
............................................................................................................................................TCTCTGTTGTGCTCCCAGTTTGTGGCA.......................................................................................................................................................................................................................................................................................................27130.08101000
.............TAGGCGCCA-AATCCAAGAATCACAAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................27140.07100010
.........................................................................................................................................................................ACAGATTCCTCTGAATGTCCAAATT............................................................................................................................................................................................................................................................................25160.06101000
......................................................................................................................................................................ATTACAGATTCCTCTGAATGT...................................................................................................................................................................................................................................................................................21160.06100010
......................................................................................................................................GATTTATCTCTGTTGTGCTCCCAG................................................................................................................................................................................................................................................................................................................24160.06101000
..........................................................................................................................................TATCTCTGTTGTGCTCCCAGTT..............................................................................................................................................................................................................................................................................................................22170.06100010
............................................................................................................................................TCTCTGTTGTGCTCCCAGTTTGTGG.........................................................................................................................................................................................................................................................................................................25170.06101000
.........................................................................................................................................TTATCTCTGTTGTGCTCCCAGTTTGT...........................................................................................................................................................................................................................................................................................................26170.06100010
.....................A-AATCCAAGAATCACAAGCATTGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................26170.06101000
..........................................................................................................................................TATCTCTGTTGTGCTCCCAGTTTG............................................................................................................................................................................................................................................................................................................24170.06100010
.....................A-AATCCAAGAATCACAAGCATTGG................................................................................................................................................................................................................................................................................................................................................................................................................................24170.06101000
...........................................................................................................................................ATCTCTGTTGTGCTCCCAGTTTGTG..........................................................................................................................................................................................................................................................................................................25170.06101000
............................................................................................................................................TCTCTGTTGTGCTCCCAGTTTG............................................................................................................................................................................................................................................................................................................22170.06101000
........................................................................................................................................TTTATCTCTGTTGTGCTCCCAGTT..............................................................................................................................................................................................................................................................................................................24170.06101000
.....................A-AATCCAAGAATCACAAGCATTG.................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
............................................................................................................................................TCTCTGTTGTGCTCCCAGTTTGTGGTG.......................................................................................................................................................................................................................................................................................................27170.06100010
.......................AATCCAAGAATCACAAGCATT..................................................................................................................................................................................................................................................................................................................................................................................................................................21180.06100010
.............................................................................................................................................CTCTGTTGTGCTCCCAGTTTGTGG.........................................................................................................................................................................................................................................................................................................24180.06101000
.........................TCCAAGAATCACAAGCATTGGCTGACTCA........................................................................................................................................................................................................................................................................................................................................................................................................................29180.06101000
.......................AATCCAAGAATCACAAGCATTGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................25180.06101000
..............................................................................................................................................TCTGTTGTGCTCCCAGTTTGTGG.........................................................................................................................................................................................................................................................................................................23180.06101000
........................................................................................................................TAACTTGCATGTTGGATTTATCTCTGTTG.........................................................................................................................................................................................................................................................................................................................29190.05101000
.......................................................................................................................TTAACTTGCATGTTGGATTTATCTCT.............................................................................................................................................................................................................................................................................................................................26190.05101000
........................................................................................................................TAACTTGCATGTTGGATTTATCTCTGT...........................................................................................................................................................................................................................................................................................................................27190.05100010
...................................................................................................................................................TGTGCTCCCAGTTTGTGGCATTAC...................................................................................................................................................................................................................................................................................................24190.05101000
..............................................................................................................................GCATGTTGGATTTATCTCTGTTGTG.......................................................................................................................................................................................................................................................................................................................25190.05101000
.......................................................................................................................TTAACTTGCATGTTGGATTTATCTCTGT...........................................................................................................................................................................................................................................................................................................................28190.05101000
...................................................................................................................................................TGTGCTCCCAGTTTGTGGCATTACA..................................................................................................................................................................................................................................................................................................25190.05101000
........................................................................................................................TAACTTGCATGTTGGATTTATCTCTG............................................................................................................................................................................................................................................................................................................................26190.05100010
.......................................................................................................................TTAACTTGCATGTTGGATTTATCTCTG............................................................................................................................................................................................................................................................................................................................27190.05101000
......................................................................................................ATACCCTCTTGTCCATCTTAACTTGC..............................................................................................................................................................................................................................................................................................................................................26200.05101000
.................................TCACAAGCATTGGCTGACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
..............................................................................................................TTGTCCATCTTAACTTGCATGTTG........................................................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................................ACCCTCTTGTCCATCTTAACTTGCAT............................................................................................................................................................................................................................................................................................................................................26200.05101000
.................................................................................................................................TGTTGGATTTATCTCTGTTGTGCTCG...................................................................................................................................................................................................................................................................................................................26200.05101000
..............................................................................................................................................................................TTCCTCTGAATGTCCAAATTT...........................................................................................................................................................................................................................................................................21200.05100001
..............................................................................................................TTGTCCATCTTAACTTGCATGTTGGA......................................................................................................................................................................................................................................................................................................................................26200.05100010
.................................................ACTCATGTTACCCAGCGATCGTGGCCAT.................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.......................................................................................................TACCCTCTTGTCCATCTTAACTTGC..............................................................................................................................................................................................................................................................................................................................................25200.05101000
.........................................................TACCCAGCGATCGTGGCCACTGCTAA...........................................................................................................................................................................................................................................................................................................................................................................................26200.05110000
..........................................................ACCCAGCGATCGTGGCCACTGCTAA...........................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....TGTGAATGTAGGCGCCA-AATCCAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
.................................................ACTCATGTTACCCAGCGATCGTGGCCAC.................................................................................................................................................................................................................................................................................................................................................................................................28200.05100010
......................................................................................................................................GATTTATCTCTGTTGTGCTCC...................................................................................................................................................................................................................................................................................................................21200.05100010
..................................................................................................................................GTTGGATTTATCTCTGTTGTGCTCC...................................................................................................................................................................................................................................................................................................................25200.05101000
............................................................................................................TCTTGTCCATCTTAACTTGCATGTTGGA......................................................................................................................................................................................................................................................................................................................................28200.05101000
.................................................................................................................................................................................CTCTGAATGTCCAAATTTTTT........................................................................................................................................................................................................................................................................21200.05110000
..................................................CTCATGTTACCCAGCGATCGTG......................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.................................................................................................................................TGTTGGATTTATCTCTGTTGTGCT.....................................................................................................................................................................................................................................................................................................................24200.05101000
...................................................................................................................................TTGGATTTATCTCTGTTGTGCTCC...................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................CCCAGCGATCGTGGCCACTGC..............................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.....................................................................................................TATACCCTCTTGTCCATCTTAACTTGC..............................................................................................................................................................................................................................................................................................................................................27200.05101000
..............................GAATCACAAGCATTGGCTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......................................................................................................................................ATTTATCTCTGTTGTGCTCCC..................................................................................................................................................................................................................................................................................................................21200.05100100
...............................................................................................................TGTCCATCTTAACTTGCATGTTGGATT....................................................................................................................................................................................................................................................................................................................................27200.05101000
.........................TCCAAGAATCACAAGCATTGGCTGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
....................................................................................................................................................................................TGAATGTCCAAATTTTTTTTAGCT..................................................................................................................................................................................................................................................................24200.05101000
......................................................................................................ATACCCTCTTGTCCATCTTAACTTGCA.............................................................................................................................................................................................................................................................................................................................................27200.05101000
.....................................................ATGTTACCCAGCGATCGTGGCC...................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.CAACTGTGAATGTAGGCGCCA-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.................................................ACTCATGTTACCCAGCGATCGTGGCCT..................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
......................................................TGTTACCCAGCGATCGTGGCCACT................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100
..................................................................................................................................GTTGGATTTATCTCTGTTGTGCTCCC..................................................................................................................................................................................................................................................................................................................26200.05110000
..............................................................................................................TTGTCCATCTTAACTTGCATGTTGGATT....................................................................................................................................................................................................................................................................................................................................28200.05100010
...........................CAAGAATCACAAGCATTGGCTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.................................................................................................................TCCATCTTAACTTGCATGT..........................................................................................................................................................................................................................................................................................................................................19200.05101000
.................................................................................................................................TGTTGGATTTATCTCTGTTGTGCTCCC..................................................................................................................................................................................................................................................................................................................27200.05100010
...........................................................................................................CTCTTGTCCATCTTAACTTGCATGTTG........................................................................................................................................................................................................................................................................................................................................27200.05101000
.........................................................................................................CCCTCTTGTCCATCTTAACTTGCA.............................................................................................................................................................................................................................................................................................................................................24200.05101000
...............................................................................................ATCCGCTATACCCTCTTGTCCATCT......................................................................................................................................................................................................................................................................................................................................................25200.05101000
GCAACTGTGAATGTAGGCGCCA-.......................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05110000
droVir3
AGC-----------AGAG-CCA-GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAAAAATGAAAAATAATTTG-CTGTACTCTGAT------------T-GTAGCTTTATCGCGTCATTGGCTATAGCAGCAGCAATAGCACAACATGAAATAAGGTACTCTGCGTAGCCGTAGAGGTAGCTGAA-AGCTGATAGCGAGA-TGAGAGCAGAGCAAATGAAATTGTT--T-CATTTGCTAC-GGCTACTGTG------CGC------TTT----TATTCAT--T-----------------TTG-TTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................TTTG-CTGTACTCTGAT------------T-GTAGCTTTA......................................................................................................................................................................................................2611.001000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TGTACTCTGAT------------T-GTAGCTTTATCGCG.................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTAC-GGCTACTGTG------CGC------.........................................2111.001000000000000000000000000001000000000000000000000000000000000000
droMoj3
AACGGCTACGTAGCATAG-CAGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAACAAC-AAAACGAATGCTCTTCTGCTCTGCT------------CCATAGCA-TAGAACATCGGAGCAAAGAGCAATAGCAAAAGCAAAAAAT-TTGCGATCCGTTATTTGTAGTTGTAGCAATAGCACAAGCATTGACAGCAAGA-TGAGAGCAAAGCAAATGAAAAAAACAATT--TTTGCTAC-TGCTACGGAGCATTGGCATTGTTTTCC-TCTTTTCCTTTTCTGTTGC--TTTCGTAGTTGCTCTCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTTTCTGTTGC--TTTCGT...........2352.2011900020
................................................................................................................................................................................................................................................................TAGCA-TAGAACATCGGAGC..........................................................................................................................................................................................1912.002200000
..............................................................................................................................................................................................................................................................................................................................TGTAGTTGTAGCAATAGCACAAGC........................................................................................................................2452.0010700030
...............................................................................................................................................................................................................................................................ATAGCA-TAGAACATCGGAGCA.........................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTTTCTGTTGC--TTTCG............2250.804400000
..............................................................................................................................................................................................................................................................................................................................TGTAGTTGTAGCAATAGCACAAGCATTG....................................................................................................................2850.603300000
...............................................................................................................................................................................................................................................................................................................................GTAGTTGTAGCAATAGCACAAGC........................................................................................................................2350.603110010
........................................................................................................................................................................................................................................................................GAACATCGGAGCAAAGAGCAATAGC.............................................................................................................................................................................2540.502100010
..............................................................................................................................................................................................................................................................................................................................TGTAGTTGTAGCAATAGCACAAG.........................................................................................................................2350.402200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTTTCTGTTGC--TTTCGTA..........2450.402200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................C-TCTTTTCCTTTTCTGTTGC--T................2150.402200000
.............................................................................................................................................................................................................................................................................................................................TTGTAGTTGTAGCAATAGCAC............................................................................................................................2150.402100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTTTCTGTTGC--TTTCGTAG.........2550.402200000
........................................................................................................................................................................................................................................................................GAACATCGGAGCAAAGAGCAATAGCAA...........................................................................................................................................................................2740.251100000
.....................................................................................................................................................................................................................................................................................AAGAGCAATAGCAAAAGCA......................................................................................................................................................................1940.251100000
........................................................................................................................................................................................................................................................................GAACATCGGAGCAAAGAGCAAT................................................................................................................................................................................2240.251100000
....................................................................................................................................................................................................................................................................................AAAGAGCAATAGCAAAAGCAAAAA..................................................................................................................................................................2440.251100000
........................................................................................................................................................................................................................................................................GAACATCGGAGCAAAGAGCA..................................................................................................................................................................................2040.251100000
.........................................................................................................................................................................................................................................................................AACATCGGAGCAAAGAGCAATAGCAA...........................................................................................................................................................................2640.251100000
......................................................................................................................................................................................................................................................................TAGAACATCGGAGCAAAGAGCAATAGC.............................................................................................................................................................................2740.251100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCCTTTTCTGTTGC--TTT..............2150.201100000
..............................................................................................................................................................................................................................................................................................................................TGTAGTTGTAGCAATAGCACAAGCA.......................................................................................................................2550.201100000
..............................................................................................................................................................................................................................................................................................................................TGTAGTTGTAGCAATAGCACAA..........................................................................................................................2250.201100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTTTCTGTTGC--TTTCGTAG.........2450.201100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTTTCTGTTGC--TTTC.............2150.201100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTTTCTGTTGC--TTTCG............2150.201100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCTTTTCTGTTGC--TTTCGC...........2350.201000010
..............................................................................................................................................................................................................................................................................................................................TGTAGTTGTAGCAATAGCACAAGCATC.....................................................................................................................2750.201100000
droGri2
GAGAGC--AATAGCAAAC-CCAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAAAATT-GAAATAAATGCTCTTTTGCACTGCT------------CTGAT--------------------CTGTCAAGAACAATAGCAAAAACATTTCCATTGTGCTCTCTGTAGTTGTAGCAATAGCAGAAAGAATAATAATAAAT-ATAATATA-AATAAATAA-TATAA---AT-----------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTTATCTCCGGTC-TTAGGAAG--------------------------------C------------CGTTGAGAGCGGT--------------------------------------------------------------------------------------------------------------------------------TGT-GTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................GGTC-TTAGGAAG--------------------------------C------------CGTTGAGAG...........................................................................................................................................2250.8040400000000
................................................................................................................................................................................................................................................................GGTC-TTAGGAAG--------------------------------C------------CGTTGAGAGC..........................................................................................................................................2350.8040400000000
.............................................................................................................................................................................................................................................................TCCGGTC-TTAGGAAG--------------------------------C------------CGTTGAGA............................................................................................................................................2450.4020200000000
................................................................................................................................................................................................................................................................GGTC-TTAGGAAG--------------------------------C------------CGTTGAGAGCGG........................................................................................................................................2550.4020200000000
...............................................................................................................................................................................................................................................................CGGTC-TTAGGAAG--------------------------------C------------CGTTGAGAGCG.........................................................................................................................................2550.2010100000000
.....................................................................................................................................................................................................................................................................TTAGGAAG--------------------------------C------------CGTTGAGAGCGGT--------------------------------------------------------------------------------------------------------------------------------T......2350.2010100000000
..................................................................................................................................................................................................................................................................TC-TTAGGAAG--------------------------------C------------CGTTGAGAGCGT........................................................................................................................................2350.2010100000000
..................................................................................................................................................................................................................................................................TC-TTAGGAAG--------------------------------C------------CGTTGAGAGC..........................................................................................................................................2150.2010000100000
...................................................................................................................................................................................................................................................................C-TTAGGAAG--------------------------------C------------CGTTGAGAGC..........................................................................................................................................2050.2010100000000
................................................................................................................................................................................................................................................................GGTC-TTAGGAAG--------------------------------C------------CGTTGAGAGCG.........................................................................................................................................2450.2010100000000
................................................................................................................................................................................................................................................................GGTC-TTAGGAAG--------------------------------C------------CGTTGAGAGCGGT--------------------------------------------------------------------------------------------------------------------------------T......2750.2010000001000
................................................................................................................................................................................................................................................................GGTC-TTAGGAAG--------------------------------C------------CGTTGAGA............................................................................................................................................2150.2010100000000
.............................................................................................................................................................................................................................................................TCCGGTC-TTAGGAAG--------------------------------C------------CGTTGAG.............................................................................................................................................2360.1710100000000
CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTTATCTCCGGTC-TTAGGA...................................................................................................................................................................................................2560.1710100000000
CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTTATCTCCGGTC-TTAG.....................................................................................................................................................................................................2360.1710100000000
CAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTTATCTCCGGTC-TTAGGAAG--------------------------------.................................................................................................................................................................2760.1710100000000
droAna3
CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCATTCATTGCAGGGC-TTAAAAGA--------------------------------C------------CACTCAAGTCACT--------------------------------------------------------------------------------------------------------------------------------CGT-GCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................ATTCATTGCAGGGC-TTAAAAGA--------------------------------.................................................................................................................................................................22150.071100000
droBip1
ATCGGCTCTGT-GCATAG-CAGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAA-AATCAAAACGGCTGCT-CTTTGCTCTGCT------------CTGTAGCA-CTGAACGTCGGAGCACGGAGCAATAGCAATAGCAAGAAAATGCGCGACACGCTATTTGTAGTTGTAGCAATAGCACAAGCATCGACAGTGAGA-TGAGAGCAGAGCCAAAGAAAATAAT--ATTGT--GCT------CTCGTAGCAACTGCATAGTCGCTC-TC------------GTAGCAACTACGTAGTCACTCTGGSizeHit CountTotal NormTotal
No Reads
droKik1
ACGAGAGCCGTAACAGAG-CCG-TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAGAACGGCAAAGCCTATG-CTCTGCTCTGCT------------C-GTAGTTTTCTCGGATCAAAAACTACGGCTATAGCTATAGCAAAAAATAAATAGCAGTGCTCTGCGTAGCCGTAGCCGTAGCAAAA-AATTGAGAGCGAGA-TGAAAGCAGAGCAAAAGGAGTTTCG--T-CATATGCTACCTGCTGTCGCG------TGC------CCC----CGTTTCTCTC-----------------TCT-TTCSizeHit CountTotal NormTotal
No Reads
droFic1
ATTGGCTCTGTAGCATAG-CAG-AG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCACAAAATCAAAACGGCTGCT-CTCTGCTCTGCT------------CTGTAGCA-CCAAACGTCGGAGCACGGAGCAATAGCAATAGCAAGAAAGTGTGCGACACGCTATTTGTAGTTGTAGCAATAGCACAAGCATCGACAGCGAGT-TGAAAGCAGAGCCAACGAAAAGAA---ATTGT--GCT------TTCGTAGCAACTGCATAGTCACTC-TC------------GTTGCAACTACGTAGTCGCTCTTGSizeHit CountTotal NormTotal
No Reads
droEle1
ACGAGAGCCGGATCAGAG-AAT-TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAACAACGAAAATGTATTTG-CTCTGCTCTGC--------------------------------------------------------------------------CCTGCGTAGTCGTAGCA-----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATCGGCTCTGTAGCAAG--CAGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAAAAGC-AAAACGGTTGCTTTTCTGCTCTGCT------------CTGTAGCA-CAGAACGTCGGAGTACAGAGCAATAGCAATAGCAAAAAAT-GCGCGACATACTATTTGTAGTTGTAGCTATAGCACAAGCATCGACAGCGAGAATGAGAGCAAAGCGAACGAAAATAAT-----------------------AGCAACTCTGTTTTTGCTC-TC------------GTAGCAGCTGCGTAGTTGCTCTCASizeHit CountTotal NormTotal
No Reads
droBia1
TAGGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGCTTTTATTGCAGGGC-TCAAGAAA--------------------------------C------------CGCTCAAATCGAT--------------------------------------------------------------------------------------------------------------------------------GGT-GCTSizeHit CountTotal NormTotal
No Reads
droTak1
ACGAGAGCCGTAGCAGAG-CCA-TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAAGTAACGAGAAAGTTTGTG-CTCTGCTCTGCT------------C-GTAGTTTTGTCGCTTCAGAAACTGTAGCAATAGCGGTAGCAGAAAATCCAGTCCTGTGCTCTGTGTAGCAGTAACGGTAGCAAAA-AATTGATAGCGAGA-TGAGAGCAGAGCA---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGCG-----GGAGCAGAG-CCG-AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAAAAACGAAAACTGATCAA-CTCTGCTCTGCT------------CCGAGCT-ACAAAAAGTTCAGAGCTATAGCTATAGCAATAGCAGAAAATAATATTCTGTGCTCCGCGTAGCCGTAGCCGTATA-CGAAAATTGAGAGCGAGA-TCAGAGCAGAGCAAAAGATATTTTT--A-TTGGTGCTAC-GGCTCTCGGG------TAT------ATTCCTTCGGCTTTTCT-----------------GCT-TCTSizeHit CountTotal NormTotal
No Reads
dm3
CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGCC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....2194.00360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000200000000100000000000000001000000000000210000000000000000000000000000000000000000000000000002500020010000100000000003000000110022300001000300000010000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....2492.56230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000070000000022100000000100200100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000203000000
..........................................................................................................................................................................................................................................................................AAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..2182.38190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000600030000000000000000000020000010001100010000000000001010
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTG........................................................................................................................................2192.22200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000002000000000000000000000000100000000100100000000000010000000000010010100000000000000000000000000000000000000000000000000000020000000000000000000000000000002010011000010100000000
.......................................................................................................................................................................................................................................................................AAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------G......2192.11190000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000001000000000000000000000000000000100000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000300000000000100000000110000000010011000000001000000010000
.........................................................................................................................................................................................................................................................................AAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-...2191.56140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500050000000000000000000000000000001100010000000000000000
.............................................................................................................................................................................................................................................................TCGGGCC-TCAAAAAG--------------------------------T------------CCCTTAGAGC..........................................................................................................................................2661.3380000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
...................................................................................................................................................................................................................................................................C-TCAAAAAG--------------------------------T------------CCCTTAGAGCT.........................................................................................................................................2191.22110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000030000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100020000010000000000
.......................................................................................................................................................................................................................................................TTCACTTCGGGCC-TCAAAAAG--------------------------------.................................................................................................................................................................2151.2060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000001000
.TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGCC-.........................................................................................................................................................................................................2161.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100001000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................AG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2180.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000001000000000001000000000000000000000
......................................................................................................................................................................................................................................................CTTCACTTCGGGCC-TCAAAAG..................................................................................................................................................................................................2150.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TCACTTCGGGCC-TCAAAAAG--------------------------------T------------....................................................................................................................................................2150.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CC-TCAAAAAG--------------------------------T------------CCCTTAGAGC..........................................................................................................................................2180.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................................CACTTCGGGCC-TCAAAAAG--------------------------------T------------C...................................................................................................................................................2160.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000
.TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGCC-T........................................................................................................................................................................................................2260.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..2680.5040000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCT.........................................................................................................................................2090.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CTTCACTTCGGGCC-TCAAAAAG--------------------------------.................................................................................................................................................................2250.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGCCTTCACTTCGGGCC-TCAAAAAG--------------------------------T------------....................................................................................................................................................2650.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTCACTTCGGGCC-TCAAAAAG--------------------------------T------------....................................................................................................................................................2250.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..2080.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000010000
CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGC...........................................................................................................................................................................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....2090.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------.......2190.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000100000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2680.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..2280.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------G......2290.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGC..........................................................................................................................................1990.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................C-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....2590.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....2390.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------G......2390.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................TCACTTCGGGCC-TCAAAAAG--------------------------------.................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................CCTTCACTTCGGGCC-TCAAAAAG--------------------------------T------------C...................................................................................................................................................2550.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGCCTTCACTTCGGGCC-TCAAAAAG--------------------------------T------------C...................................................................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CTTCACTTCGGGCC-TCAAAAAG--------------------------------A------------....................................................................................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TCACTTCGGGCC-TCAAAAGT--------------------------------.................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................CCTTCACTTCGGGCC-TCAAAAAG--------------------------------T------------....................................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GCC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------.......2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CATGCCTTCACTTCGGGCC-TC.......................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTCGGGCC-TCAAAAAG--------------------------------T------------CCCTTAGAGC..........................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGCC-G........................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGC...........................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGCC-T........................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATGCCTTCACTTCGGGCC-TCA......................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................ATGCCTTCACTTCGGGCC-TCT......................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ACTTCGGGCC-TCAAAAAG--------------------------------T------------CT..................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGG............................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ACTTCGGGCC-TCAAAAAG--------------------------------T------------C...................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGT.............................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2780.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CC-TCAAAAAG--------------------------------T------------CCCTTAGAG...........................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTT3080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................G--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTT2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................................................CC-TCAAAAAG--------------------------------T------------CCCTTAGAGCT.........................................................................................................................................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..2380.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..2580.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................AAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2580.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................AAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-...2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-...2290.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GC.....2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------G......2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................AAAAAG--------------------------------T------------CCCTTAGAGCTG........................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGG-...2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-...2390.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-...2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................G--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....1790.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGA-...2290.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................AAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------G......1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAAAAG--------------------------------T------------CCCTTAGAGCT.........................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTG........................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................CC-TCAAAAAG--------------------------------T------------CCCTTAGAGTA.........................................................................................................................................2290.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAG...........................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCTTTTATTTCAGGGC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCT.........................................................................................................................................1934.331361510000000000000
.................................................................................................................................................................................................................................................CATGCTTTTATTTCAGGG...........................................................................................................................................................................................................1844.0016000015000001000000
.................................................................................................................................................................................................................................................CATGCTTTTATTTCAGGGC-TCAA.....................................................................................................................................................................................................2344.0016000015000010000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..2632.67800000014300000000
.................................................................................................................................................................................................................................................CATGCTTTTATTTCAGGGC-TCAAA....................................................................................................................................................................................................2442.501000015001102000000
.................................................................................................................................................................................................................................................CATGCTTTTATTTCAGGGC-TCAAAA...................................................................................................................................................................................................2542.00800015010001000000
...................................................................................................................................................................................................................................................TGCTTTTATTTCAGGGC-TCAAAAAG--------------------------------T------------....................................................................................................................................................2622.00400000000040000000
.................................................................................................................................................................................................................................................CATGCTTTTATTTCAGGGC-.........................................................................................................................................................................................................1941.50600105000000000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2731.33400000000202000000
.................................................................................................................................................................................................................................................CATGCTTTTATTTCAGGGC-TCA......................................................................................................................................................................................................2241.25500005000000000000
.................................................................................................................................................................................................................................................CATGCTTTTATTTCAGGGC-TC.......................................................................................................................................................................................................2141.25500000500000000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2630.67202000000000000000
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2430.67202000000000000000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGC..........................................................................................................................................1830.67210100000000000000
.......................................................................................................................................................................................................................................................................AAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..2430.67200000000002000000
..........................................................................................................................................................................................................................................................ATTTCAGGGC-TCAAAAAG--------------------------------T------------CCCTTAGA............................................................................................................................................2720.50100000001000000000
...................................................................................................................................................................................................................................................TGCTTTTATTTCAGGGC-TCAAAAAG--------------------------------T------------C...................................................................................................................................................2720.50100100000000000000
...................................................................................................................................................................................................................................................TGCTTTTATTTCAGGGC-TCAAAAAG--------------------------------.................................................................................................................................................................2540.50200000001001000000
...............................................................................................................................................................................................................................................................AGGGC-TCAAAAAG--------------------------------T------------CCCTTAGAGC..........................................................................................................................................2420.50100000000001000000
..............................................................................................................................................................................................................................................................CAGGGC-TCAAAAAG--------------------------------T------------CCCTTAGAGCT.........................................................................................................................................2620.50100000000001000000
............................................................................................................................................................................................................................................................TTCAGGGC-TCAAAAAG--------------------------------T------------CCCTTAGAGC..........................................................................................................................................2720.50100000000001000000
............................................................................................................................................................................................................................................................................G--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------.......1530.33100000000001000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-...2530.33100000001000000000
.TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCTTTTATTTCAGG............................................................................................................................................................................................................1930.33100000000001000000
..........................................................................................................................................................................................................................................................................AAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....1930.33100000000001000000
.TG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCTTTTATTTCAGGGC-TCAA.....................................................................................................................................................................................................2530.33100000000000010000
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GA.....2130.33100000000001000000
...........................................................................................................................................................................................................................................................................AG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CT.2130.33100000000000001000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCC.........................................................................................................................................1930.33110000000000000000
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....2130.33100000000100000000
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGC..........................................................................................................................................1930.33100000000001000000
.................................................................................................................................................................................................................................................CATGCTTTTATTTCAGGGC-TCAAAAA..................................................................................................................................................................................................2640.25100000001000000000
...................................................................................................................................................................................................................................................TGCTTTTATTTCAGGGC-TC.......................................................................................................................................................................................................1940.25100000000001000000
...................................................................................................................................................................................................................................................TGCTTTTATTTCAGGGC-TCAAAA...................................................................................................................................................................................................2340.25100000000001000000
......................................................................................................................................................................................................................................................TTTTATTTCAGGGC-TCAAAAA..................................................................................................................................................................................................2140.25100000000001000000
......................................................................................................................................................................................................................................................TTTTATTTCAGGGC-TCAAAA...................................................................................................................................................................................................2040.25100000000001000000
.......................................................................................................................................................................................................................................................TTTATTTCAGGGC-TCAAA....................................................................................................................................................................................................1840.25100000000001000000
droSec2
CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCGGGTC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTG........................................................................................................................................2161.0066000
...................................................................................................................................................................................................................................................................C-TCAAAAAG--------------------------------T------------CCCTTAGAGCT.........................................................................................................................................2160.5033000
........................................................................................................................................................................................................................................................................AAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GG.....2170.4333000
......................................................................................................................................................................................................................................................................CAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------.......2170.4333000
............................................................................................................................................................................................................................................................................G--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTT2170.4332001
.....................................................................................................................................................................................................................................................................TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------.......2260.3322000
...........................................................................................................................................................................................................................................................................AG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTT2270.1411000
............................................................................................................................................................................................................................................................................G--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-C..1970.1411000
droYak3
GCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACGTTTTCGTCTCAGGAT-TAAAAAAA--------------------------------T------------CTCTAAAGTGGGC--------------------------------------------------------------------------------------------------------------------------------GGT-CTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGCCTTCACTTCCGGCC-TCAAAAAG--------------------------------T------------CCCTTAGAGCTGT--------------------------------------------------------------------------------------------------------------------------------GGT-CTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:45 PM