ID:

dwi_2999

 Coordinate:

scf2_1100000004921:2236677-2236827 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.1 -5.94 -5.3

Flybase annnotation

exon [dwil_GLEANR_5684:11]; CDS [Dwil\GK22469-cds]; intron [Dwil\GK22469-in]

Repeatable elements

NameClassFamilyStrand
(CAT)nSimple_repeatSimple_repeat+
Gypsy-38_DWil-I-intLTRGypsy-
(TG)nSimple_repeatSimple_repeat+
mature
  1. scf2_1100000004511:9514739-9514761 -
  2. scf2_1100000004762:5168750-5168772 +
  3. scf2_1100000004768:2201650-2201672 -
  4. scf2_1100000004943:12520853-12520875 -
  5. scf2_1100000004902:3214470-3214492 +
  6. dwi_2999  scf2_1100000004921:2236697-2236719 -
star
  1. scf2_1100000004511:1373969-1373987 -
  2. scf2_1100000004511:3178349-3178367 -
  3. scf2_1100000004511:9377025-9377043 -
  4. scf2_1100000004513:5784535-5784553 -
  5. scf2_1100000004514:226230-226248 -
  6. scf2_1100000004514:754070-754088 -
  7. scf2_1100000004515:692506-692524 -
  8. scf2_1100000004521:2291321-2291339 -
  9. scf2_1100000004521:3154438-3154456 -
  10. scf2_1100000004590:180514-180532 -
  11. scf2_1100000004762:1404988-1405006 -
  12. scf2_1100000004768:1242035-1242053 -
  13. scf2_1100000004768:2072217-2072235 -
  14. scf2_1100000004943:4857616-4857634 -
  15. scf2_1100000004902:769081-769099 -
  16. scf2_1100000004909:5070967-5070985 -
  17. scf2_1100000004909:7524169-7524187 -
  18. scf2_1100000004909:9401688-9401706 -
  19. dwi_2999  scf2_1100000004921:2236755-2236773 -
  20. scf2_1100000004963:3687872-3687890 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACCACCACCGCCAAACACACAACCACACACCACACACACAACACACACACTCTCATAAAACCGCCCACACTCATACACACAACACAAACACAAATGCATGCATGCAATGATGATGATGATGATGATGATGCCAAAATAATGATGACTCTACGATGACGATGATGATGATGATGATGATAACGATATTGATAATAACCTAAGGGGGTTGGTCGTGGGCATGGAATCACAGTGCAGCGTGGCCGAGTCGTTGG
********************************************************************************************************.....((.((.((.((.((.((.((...........((....))..........)).)).)).)).)).)).))...********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 M020
head
 V118
embryo
 V119
head
.........................................................................................................................................................................................................................ATGGAATCACAGTGCAGCGT.............. 20 0 1 2.00 2 0 2 0 0 0
......................................................................................................................................................................................................................................GAAGGGTGGCCGAGTGGTTG. 20 3 10 1.20 12 1 11 0 0 0
...............................................................................................................................................................................................................GGTCGTGGGCATGGAATCACAGTGC................... 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................GTGGAATCACAGTGCCGCGTGGCAGAGT...... 28 3 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................GCATGGAATCACAGTGCAGCGTGGC........... 25 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................GTTGGTCGTGGGCATGTAATC.......................... 21 1 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................................................................GGTCGTGGGCATGGAATCACAGTGCA.................. 26 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................TTGGTCATGGGCGTGGAATCACA....................... 23 2 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................CATGGAATCACAGTGCAGCGTGG............ 23 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................GGTTGGTCGTGGGCATGGA............................. 19 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................................................GTGGAATCACAGTGCCGCGTGGCAGA........ 26 3 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................................AGGGTGGCCGAGTGGTTG. 18 2 10 0.90 9 4 5 0 0 0
.............................................................................................................................................................................................................................CATCACAGTGCAGCGAGGT........... 19 3 10 0.50 5 2 0 0 3 0
..............................................................................................................................................................................................................................ATCACAGTGCAGCGAGGT........... 18 2 4 0.25 1 0 0 0 1 0
......................................................................................................................................................................................................................................GAAGGGTGGCCGAGTGGTT.. 19 3 20 0.20 4 0 4 0 0 0
..............................................................................................................................................................ATGATGATGATGATGATGATAAC...................................................................... 23 0 6 0.17 1 0 1 0 0 0
.........................................................................................................................................................................................................................TTGAAATCACAGTCCAGCGT.............. 20 3 6 0.17 1 1 0 0 0 0
................................................................................................................................................................GATGATGATGATGATGATAACGAT................................................................... 24 0 6 0.17 1 0 0 0 1 0
..........................................................................................................................................................GACGATGATGATGATGATGATGATA........................................................................ 25 0 10 0.10 1 1 0 0 0 0
......................................................................................................................................................................GATGATGATGATAACGAT................................................................... 18 0 13 0.08 1 0 0 1 0 0
.........................................................................................................................................................................................................GGGGACGGTCGTGGGCATC............................... 19 3 14 0.07 1 1 0 0 0 0
......................................................................................................................................................CGATGACGATGATGATGATGATGATGA.......................................................................... 27 0 17 0.06 1 0 0 0 1 0
......ACCGGCGAACACACCACCA.................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0
.....................................................................................................................................................ACGATGACGATGATGATGATG................................................................................. 21 0 20 0.05 1 0 1 0 0 0
......................................................................................................................ATGATGAAGATGCAAAAAT.................................................................................................................. 19 2 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................GATGACGATGATGATGATGATGAT............................................................................ 24 0 20 0.05 1 0 0 0 1 0
........................................................................................................CAATGATGATGATGATGAT................................................................................................................................ 19 0 20 0.05 1 0 0 0 1 0
.........................................................................................................AATGATGATGATGATGATGAT............................................................................................................................. 21 0 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

TGGTGGTGGCGGTTTGTGTGTTGGTGTGTGGTGTGTGTGTTGTGTGTGTGAGAGTATTTTGGCGGGTGTGAGTATGTGTGTTGTGTTTGTGTTTACGTACGTACGTTACTACTACTACTACTACTACTACGGTTTTATTACTACTGAGATGCTACTGCTACTACTACTACTACTACTATTGCTATAACTATTATTGGATTCCCCCAACCAGCACCCGTACCTTAGTGTCACGTCGCACCGGCTCAGCAACC
**********************************************************************.....((.((.((.((.((.((.((...........((....))..........)).)).)).)).)).)).))...******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V119
head
 V117
male body		 V118
embryo
...............................................................................................................................................................................CTATGGCTATAACTAGTAT......................................................... 19 2 2 2.00 4 0 4 0 0 0
.............................................................................................................................................................................TACTATGGCTATAACTAGTAT......................................................... 21 2 1 1.00 1 0 0 1 0 0
..................TGTTGGGGTGTGGTGTGTGTGT................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................TGTGGGTGTGTGGTGTGGGTGTGGTG............................................................................................................................................................................................................... 26 3 3 0.33 1 1 0 0 0 0
.................GTGTTGGGGTGCGGTGTGTGT..................................................................................................................................................................................................................... 21 2 4 0.25 1 1 0 0 0 0
.................GTGTTGGAGTGCGGTGTGTG...................................................................................................................................................................................................................... 20 2 6 0.17 1 1 0 0 0 0
.................GTGTTGGAGTGCGGTGTGTGT..................................................................................................................................................................................................................... 21 2 6 0.17 1 1 0 0 0 0
...........................................................................................................................................................................................................................CCTTAGTGTTAGGTCGCG.............. 18 3 20 0.10 2 2 0 0 0 0
........................................................TTTTGGTGGGTGTGATTATGC.............................................................................................................................................................................. 21 3 10 0.10 1 0 0 0 1 0
..........................................................................................GTCTACGTACGTCCGTTA............................................................................................................................................... 18 2 12 0.08 1 1 0 0 0 0
....................................................................................................................................................AGGCTACTGCTACTACTAGTA.................................................................................. 21 2 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................TGCTACTGCTACTACTACTAC................................................................................. 21 0 20 0.05 1 1 0 0 0 0
..................TGTGGGTGTGTGGTGTGGGTGT................................................................................................................................................................................................................... 22 2 20 0.05 1 0 0 0 1 0
..............................GTGTGTGTGTTGTGTGTG........................................................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004921:2236627-2236877 - dwi_2999 ACCACC-------------ACC-GC-CAA-ACACA---------------------CAA-----C--------CACACAC----CACACA---CACA--------------ACACACA------------CACTCTC--------------------------------ATAAA-ACCGCCC--------------ACACTC--AT-AC---------------------------------ACACA----------------------------AC----ACAAACACA-AATGC---------ATGCATG----CAAT---------------------------------GATGATGATGATGAT--GATGATGCC--------------------------AAAA-----------TAATGATGAC-----TCTACGATGACGAT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---GA------------------TAACG------ATATTGATAAT-------------------------AAC---CTAAGGGGGTTGGTCGTGGGCATGGAATCACAGTGCAGCGTGGCCGAGTCGTTGG
droVir3 scaffold_13047:12081382-12081581 - ACAC-------------ACCAACAC-AAC-ACACA---------------------CAC--ACACA--------------CACACA--CA----------------------CACACA--------------CACGAAA----------------------TGCAC-ACTA---------------------------------TC---------------------ACACATACACGCC-CACACA----------------------------CA----C--ACTACAAAATGC---------ATGCATG----CCAT---------------------------------GATGATGTGGATGAT--GATGATG----------------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGT------GAT----GAT--------------C------A--------------------------------------T-GACTAGGGGGCTGGCCGTGGGCATGGAATCACAGTCCCGCGTGGCCGAGCCGTTGG
droMoj3 scaffold_6540:29699151-29699328 + ACACTC-------------A------------------------------------------CACACA--CG------CATACGCA--TACG----------------------CAAA--------------CACGA---ACATGCACACTC---------------------------TG--TCTC-------ACACACAC--AC-ACACA------------CACA------C-------ACACA----------------------------CA----C--ACTACA-A-----------ACATGCATG----CA----------------------------------------------------------------------------------------------------TG--------CCATTGCAAT-------CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------T------GATGATA---------------------------------------------------------------------------ATTAGGGAGCTGGTCGTGGGCATGGAATCACAGTCCCGCGTGGACGAGCCGTTGG
droGri2 scaffold_15110:16369070-16369282 - ATCAAC-------------AAC------A-ACAGC---------------------AAC-AATAC--------AACACAC----AA--------------------------CACACT------------C-------------------------------------------------------------------------GTCAGAAG------------AACA------A----C-AAGAGAGGAG------------------------CC----CT--------GTTGAA----ATCAAAGCTT--------T-------------------AATGCCGACAAAACAACGACTACGACGAC--GACGACGAC---------------------GATT----A-----------TGGTG-------------------ATGAT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---GAT----AAT--------------A------ATGTTGATTAT------------------------------GAGC--AAAGATGATGCTG-----AGAATGATGATGACAGGTAGCCGAGT------
dp5 2:5966610-5966850 + dps_383 CTGGAA-----------TCGCTATATGAATCCACC---------------------CACACACACA----------------CA------------------------------CACACACGCATAC----------------------------------------------AAA---CA--C--T-CAACCCACACACACACAC------------------------------------ACACT-----------TA---------------A-----ACCCTCACA-AATGCCAC--GCTCATGCATG----AAAT---------------------------------GATGACGATGACGAC--GATGATGAT------------------GATG---CCATG--------------TGTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTGTTGATGATGAT------GAT----GAT--------------G------A------------------------------TGGCCATAT--AATAGGGGGCTGGTCGTGGGCATGGAACCACAGTGCAGCGTGGCAAAGCCGTTGG
droPer2 scaffold_45:305238-305444 - ACCCCC-------------A----------CCACC---------------------ATC-CACTC--------------------------CCC----------------------CTCA----TCA----------------------------------------------ACA---CA--T--TACAAG----CC-------------------------------------ACT--CAATAAG----CTGCCATCGACGGCGCCTAAAGTGCCAAGAACACACAC--------------AAATGGAGGAGGACAAC---------------------------------GATGCTGAGGATGCT--GATGATGAT------------G---ATGA---------------------TGATGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATGATGATGATGAT------GAT----GAT--------------G------A--------------------------------------T-GATGGGGCCGATGTTCGGGATGATGTAGCCCCAGT---------------------
droAna3 scaffold_13340:12955079-12955396 - dan_3058 TCTGCC------ACAACACTTTCTC-TCT-C--TCTCTCAATCAATCAATCAATCACGTACACCC-------------CACA--CA------A----------CGACACA----CACACA--------------CGT----------------CCAC------------GCAAACACAACACG-------------------CCGT-A--------------------------------C--CACA----------------------------CC----ACCATCACA-AACGCAAAAAACAAATGCATG----CAATATTGATGAC-TACGAATATGGTGTCGATCGATCGATGA------CGAC--GACC---------------------ACGACGA------------------CA-CGATG----------------ACGAC---------------------GACG-GC-----------------------------------------------------------------------------GACG----------------------------------GTGACGA------T------GATGATC----------G-----------TGTGG------ATA-----------CATATGAATGATAAATG--GCCGAC---TTTAGGGAGTTGGTCATGGGCGTGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG
droBip1 scf7180000396691:1835669-1835935 - CCACACTCTGCCACAACACT--CTT-CTA-TTTCA---------------------CGTACACCC-------------CACACAC------ACC----------------------ATCA---------------CA--AACACACACACCATCCACGCAAAACAC-A----------ACACG-------------------CCGT-AC------------------------------------------------------------------------ACCATCACA-AACGCAAAAAACAAATGCATG----CATTATTGATGACCTGCGA-------------------------ATGGTGTG--GAT------CGATGACGA--TGACGACGATGATCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---GT-------------------GTGG------ATT-----------CATATGAATGATGAATG--GCCGAC---TTTAGGGAGTTGGTCCTGGGCGTGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG
droKik1 scf7180000302307:126802-127173 - ACACAC---------ACACGCTCTC-GAA-TCACA---------------------CACACACCCCCG-------------ACTCA--CACAC---------------------CACACA--------------CGAAC----------------------C-------GTAAACA---CA--C--C----------------------------------------ACACACACACT--CAACACA----------------------------CC----ACCTTCACA-AACGCA----ACTAATGCATG----CAA----------------------------------AATGATGATGATGAT--GATGAC----------GA--TGACGACGACTACC------------------TTG----------------------------------------ATGGTGTTGAATCGATAACGATAACACGATATCCGGTTTGCGGATGCGGATGTGGATGTGAATGCGGATGTGCTTATGCCGATGCCGGCGGTGTGATGTGATGTGATGCGATGCGATGCGTTGCCATGTGATGATCATGATCGCGACAA--------CC----TAC--------------G------A--------------------------------------TCGCGTAGGGAGTTGGTCGTGGGCCTGGAATCACAGTGCCGCGTGGCAGAGCCGTTGG
droFic1 scf7180000453930:152596-152905 - A-AC-------------ACGCTCTC-GAA-CCACC---------------------CAC------------------------------------------------------ACATA------------CACTCGA--AACACACACACCA---------------------------CA--C--C---------ACACACACGT-ACACG------------AACA------C----A-CACACACCAC----------------C-------CC---CACCACTACA-AACGCA----ACTAATGCATG----CAAT---------------------------------AATGACGATGATGAT--GACGC---------------------------CCGAC--CAACCACTGTG--------CCATTGAAATATGATCACGATCACGATCACAACGGTGATGATGATGGAT------------------------------------------------------------------------------------------------------------------------------GAT------GATGATG---A------------------TGTGG------ATGTGGATGATGTGGAAATGGATGTGGATTT--GTGGA-T-GTGTAGGGAATTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG
droEle1 scf7180000491080:507212-507497 + ACA---------------CGCTCTC-GAA-CCACG---------------------CAA-CACCACCACTT-AAACA-----CACA------ACACAAAACAACAACACACACACACA------------CACTTGA------------------------AACAC-ACTT---------------------------------AT-ACT-C------------TACA------------C--CACA----------------------------CC---CA--CCCACA-AACGCA----ACTAATGCATG----CAAT---------------------------------AATGACGATGATGAT--GATGACGCC------------------------------TACCCACTGTG--------CCATTGAAATATGATCACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGAT---GTGATGTAATGATGTAATGATGTGGCTGTGGATG----------------------------TG---GA-T-GTGTAGGGAGTTGGTCGTGGGCCTGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG
droRho1 scf7180000779659:207904-208177 + A-AC-------------ACGCTCTC-GAA-ACACC---------------------CAC-CACCA-------------CCCACACA------ACACA--------------ACACACA------------CACTCGA------------------------AACAC-ACGTAAACACCACAC--------------ACACACATGT-ACA------------------------------C--CACA----------------------------CC---CA--CCCACA-AACGCA----ACTAATGCATG----CAAT---------------------------------AATGACGATGATGAT--GATGATGAC------------------GCCT---------ACCCACTGTG--------CCATTGAAATATGATCACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------GATGATGAT------GAT----AATG------TGATGTGG------ATGTGGA------------------------TG---GA-T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG
droBia1 scf7180000302402:9467069-9467316 + AAAC-------------ACGCTCTC-GAA-CCACC---------------------CAC-CACCCCCA-------------CCACA--CA----------------------CACATA------------CAC-----------------CA---------------------------CA--C--C---------AC-----------A-C------------TACA------CACA--CCACACA----------------------------CC----AC--CCACAAAACGCA----ACTAATGCATG----CAAT---------------------------------TATGACGATGATGAT--GATGAT----------CATATGAT---GATGGCC-----TAACCACTGT--------------GAAAAATGACCACGAT----------------------------------------------------------------------------------------------------------------------------------------------------------GATGATGATGAT------GTG----GAT--------------G------ATG----------------------------TG---GC-T-GTGTAGGGAATTGGTCGTGGGCATGGAGTCACAATGCCGCGTGGCAGAATCGTTGG
droTak1 scf7180000415409:685851-686117 + AAAC-------------ACGCTCTC-GAA-CCACC---------------------CAC-CACCCC--------------CACACA--------------------------CACACA------------CACTCGA------------------------AACTC--CAC---------------------------------GT-ACACG------------TACATACACACA--CA-CCCACA----------------------------CC----AC-CCCACAAAACGCA----ACTAATGCATG----CAAT---------------------------------TATGACGATGACGATGTGATGATGATC------GA--TAATGATGACG-CCG----CAACCACTGTG--------CCATTGAAATGTGATCACAA-------------------------------------------------------------------------------------------------------------------------------------------------------------T------GATGATG---A------------------TATGG------ATG----------------------------TG---GA-T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG
droEug1 scf7180000409542:553738-553963 - CCCAC-------------------------------------------------------CACCCCCA-------------ACACA--CACA----------------------CACACACAAACACATACACTCGA------------------------AACAC-A-----------------------------CACATACGT--------------------------------------ACA----------------------------CC----AC-TCCACAAAACGCA----ACTAATGCATG----CAAT---------------------------------AATGACCATGTTGAT--GATGATGAC-------TATATGACGATGACG-CC--------------------------GTTGATATATGATCACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTTG----------AT-----------------------G----------------------------TG---GA-T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG
dm3 chr3R:16627818-16628061 + ACAC-------------ATGCTCTC-AAA-CCACC---------------------AAC-CACCC-------------CACACAC--------------------------ACACACA------------CACTAAA------------------------AACAC-ACAC---------------------------------AT-ACACC------------TACA------CA--TA-CACACA----------------------------TC----A--ACCACA-ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATAATGAT--GATGATGAT-------GA--TGACGACGACGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTACCGCGTGGCAGAGTCGTTGG
droSim2 3r:4678429-4678666 - dsi_1622 ACAC-------------ATGCTCTC-AAA-CCACC---------------------AAC-CACTC-------------CA----CA--------------------------CACACA------------CACCAAA------------------------AACAC-ACAC---------------------------------GT-ACACC------------TACA------CA--TA-CACACA----------------------------CC----AT-CCCACA-ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATAATGAT--GATGAT----------GA--TGACGACGACGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTACCGCGTGGCAGAGTCGTTGG
droSec2 scaffold_27:107946-108183 - dse_1124 ACAC-------------ATGCTCTC-AAA-CCACC---------------------AAC-CACTC-------------CA----CA--------------------------CACACA------------CACCAAA------------------------AACAC-ACAC---------------------------------GT-ACACC------------TACA------CA--TA-CACACA----------------------------CC----AT-CCCACA-ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATAATGAT--GATGAT----------GA--TGACGACGACGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTACCGCGTGGCAGAGTCGTTGG
droYak3 3R:5422901-5423150 + TGCAAC--------AACACACTCAC-ACA-C--TC---------------------ACA-CACAC-------------CACACCC--------------------------ACACACA------------CACTCAA------------------------AACAC-ACTC---------------------------------GT-ACACCAACACCAACTCCGACA------CA--CA-CACACC----------------------------CC----AT-CCCAC--ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATGATGAT--GATGATGAC---------------------GACCGAAAA-----------TTCTGATC----------------ACTATCAC-------------------------------------------------------------------------------------------------------------------------------------------------------TAT------GATGACGATGCG----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG
droEre2 scaffold_4770:5036026-5036261 - ACAC-------------ATGCTCTT-AAA-CCACC---------------------AAC-CACTC-------------CACACAC--------------------------ACACACT------------CACTCAA------------------------AACACCACTC---------------------------------GT-ACACC------------GACA-------A--CA-CACACC----------------------------CC----AT-CCCACA-ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATGATGAT--GATGATGAC---------------------GACCTAAAA-----------TACTGATC----------------ACTATCAC-------------------------------------------------------------------------------------------------------------------------------------------------------TAT------GATGACGATGCG----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ACCACC-------------ACC-GC-CAA-ACACA---------------------CAA-----C--------CACACAC----CACACA---CACA--------------ACACACA------------CACTCTC--------------------------------ATAAA-ACCGCCC--------------ACACTC--AT-AC---------------------------------ACACA----------------------------AC----ACAAACACA-AATGC---------ATGCATG----CAAT---------------------------------GATGATGATGATGAT--GATGATGCC--------------------------AAAA-----------TAATGATGAC-----TCTACGATGACGAT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---GA------------------TAACG------ATATTGATAAT-------------------------AAC---CTAAGGGGGTTGGTCGTGGGCATGGAATCACAGTGCAGCGTGGCCGAGTCGTTGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAATCACAGTGCAGCGT..............2012.00202000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGGCATGGAATCACAGTGC...................2511.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGAATCACAGTGCAGCGTGGC...........2511.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGGCATGGAATCACAGTGCA..................2611.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAATCACAGTGCAGCGTGG............2311.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGGTCGTGGGCATGGA.............................1911.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---GA------------------TAAC........................................................................................................2360.17101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---GA------------------TAACG------AT...............................................................................................2460.17100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---GA------------------TA..........................................................................................................25100.10100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT------GATGAT---GA------------------TAACG------AT...............................................................................................18130.08110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGACGAT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---GA------------------............................................................................................................27170.06100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATGACGAT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------G........................................................................................................................................21200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGAT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---................................................................................................................................24200.05100010
............................................................................................................................................................................................................................................................................................................................CAAT---------------------------------GATGATGATGATGAT--...........................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
.............................................................................................................................................................................................................................................................................................................................AAT---------------------------------GATGATGATGATGAT--GAT........................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
droVir3
ACAC-------------ACCAACAC-AAC-ACACA---------------------CAC--ACACA--------------CACACA--CA----------------------CACACA--------------CACGAAA----------------------TGCAC-ACTA---------------------------------TC---------------------ACACATACACGCC-CACACA----------------------------CA----C--ACTACAAAATGC---------ATGCATG----CCAT---------------------------------GATGATGTGGATGAT--GATGATG----------------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGT------GAT----GAT--------------C------A--------------------------------------T-GACTAGGGGGCTGGCCGTGGGCATGGAATCACAGTCCCGCGTGGCCGAGCCGTTGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGAATCACAGTCCCGCGTGGC...........2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT--------------C------A--------------------------------------T-GACTAGGGGGCTGGCC........................................2211.001010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGGCATGGAATCACA.......................1811.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACAGTCCCGCGTGGCC..........2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCCCGCGTGGCCGAGCC.....2111.001000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCCCGCGTGGCCGAGCCG....2211.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGCGTGGCCGAGCCG....1811.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GTGGATGAT--GATGATG----------------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------------------------------------------------GA..........................................................................................................................................20100.101000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GATGAT--GATGATG----------------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGT------................................................................................................................................21200.051000000000000000001000000000000000000000000000000000000000000000
droMoj3
ACACTC-------------A------------------------------------------CACACA--CG------CATACGCA--TACG----------------------CAAA--------------CACGA---ACATGCACACTC---------------------------TG--TCTC-------ACACACAC--AC-ACACA------------CACA------C-------ACACA----------------------------CA----C--ACTACA-A-----------ACATGCATG----CA----------------------------------------------------------------------------------------------------TG--------CCATTGCAAT-------CAA-------------------------------------------------------------------------------------------------------------------------------------------------------------T------GATGATA---------------------------------------------------------------------------ATTAGGGAGCTGGTCGTGGGCATGGAATCACAGTCCCGCGTGGACGAGCCGTTGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTGGGCATGGAATC..........................1811.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATCACAGTCCCGCGTGGAC..........2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCTGGTCGTGGGCATGGAATC..........................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAGTCCCGCGTGGACGAGCC.....2411.001100000
droGri2
ATCAAC-------------AAC------A-ACAGC---------------------AAC-AATAC--------AACACAC----AA--------------------------CACACT------------C-------------------------------------------------------------------------GTCAGAAG------------AACA------A----C-AAGAGAGGAG------------------------CC----CT--------GTTGAA----ATCAAAGCTT--------T-------------------AATGCCGACAAAACAACGACTACGACGAC--GACGACGAC---------------------GATT----A-----------TGGTG-------------------ATGAT---------------------GATG-AT------------------------------------------------------------------------------------------------------------------------------GAT------GATGAT---GAT----AAT--------------A------ATGTTGATTAT------------------------------GAGC--AAAGATGATGCTG-----AGAATGATGATGACAGGTAGCCGAGT------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
CTGGAA-----------TCGCTATATGAATCCACC---------------------CACACACACA----------------CA------------------------------CACACACGCATAC----------------------------------------------AAA---CA--C--T-CAACCCACACACACACAC------------------------------------ACACT-----------TA---------------A-----ACCCTCACA-AATGCCAC--GCTCATGCATG----AAAT---------------------------------GATGACGATGACGAC--GATGATGAT------------------GATG---CCATG--------------TGTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTGTTGATGATGAT------GAT----GAT--------------G------A------------------------------TGGCCATAT--AATAGGGGGCTGGTCGTGGGCATGGAACCACAGTGCAGCGTGGCAAAGCCGTTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................GACGAC--GATGATGAT------------------GATG---CCATG--------------TGT...................................................................................................................................................................................................................................................................................................................................2712.0020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATGGAACCACAGTGCAGCGTGGC...........2711.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................T------------------GATG---CCATG--------------TGTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTGTTGA.............................................................................................................................................2511.0010000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGGAACCACAGTGCAGCGT..............2211.0010100000000
....................................................................................................................CACACGCATAC----------------------------------------------AAA---CA--C--T-CAACCCACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGATGATGAT------GAT----G........................................................................................................................1820.5010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGATGATGAT------GAT----GAT--------------G------A------------------------------..................................................................2190.1110100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGATGAT------GAT----GAT--------------G------A------------------------------T.................................................................21130.0810100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGATGATGAT------GAT----GAT--------------G------.................................................................................................20150.0710100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGATGAT------GAT----GAT--------------G------.................................................................................................19200.0510000100000
...............................................................................................................................................................................................................................................................................................................................T---------------------------------GATGACGATGACGAC--GAA........................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGATGAT------GAT----GAT--------------........................................................................................................18200.0510000100000
droPer2
ACCCCC-------------A----------CCACC---------------------ATC-CACTC--------------------------CCC----------------------CTCA----TCA----------------------------------------------ACA---CA--T--TACAAG----CC-------------------------------------ACT--CAATAAG----CTGCCATCGACGGCGCCTAAAGTGCCAAGAACACACAC--------------AAATGGAGGAGGACAAC---------------------------------GATGCTGAGGATGCT--GATGATGAT------------G---ATGA---------------------TGATGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGATGATGATGATGAT------GAT----GAT--------------G------A--------------------------------------T-GATGGGGCCGATGTTCGGGATGATGTAGCCCCAGT---------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................ATGATGAT------------G---ATGA---------------------TGATGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT.....................................................................................................................................................23200.102200000
.............................................................................................................................................................................................................................................................................................................................................................................GCT--GATGATGAT------------G---ATGA---------------------TGATGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......................................................................................................................................................25110.091000001
droAna3
TCTGCC------ACAACACTTTCTC-TCT-C--TCTCTCAATCAATCAATCAATCACGTACACCC-------------CACA--CA------A----------CGACACA----CACACA--------------CGT----------------CCAC------------GCAAACACAACACG-------------------CCGT-A--------------------------------C--CACA----------------------------CC----ACCATCACA-AACGCAAAAAACAAATGCATG----CAATATTGATGAC-TACGAATATGGTGTCGATCGATCGATGA------CGAC--GACC---------------------ACGACGA------------------CA-CGATG----------------ACGAC---------------------GACG-GC-----------------------------------------------------------------------------GACG----------------------------------GTGACGA------T------GATGATC----------G-----------TGTGG------ATA-----------CATATGAATGATAAATG--GCCGAC---TTTAGGGAGTTGGTCATGGGCGTGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTTGGTCATGGGCGT................................1911.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGCGTGGCAGAGTCGTTG.2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATCACAGTGCCGCGTGGC...........2111.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATGGGCGTGGAATCACAGTGCC..................2511.001000001
droBip1
CCACACTCTGCCACAACACT--CTT-CTA-TTTCA---------------------CGTACACCC-------------CACACAC------ACC----------------------ATCA---------------CA--AACACACACACCATCCACGCAAAACAC-A----------ACACG-------------------CCGT-AC------------------------------------------------------------------------ACCATCACA-AACGCAAAAAACAAATGCATG----CATTATTGATGACCTGCGA-------------------------ATGGTGTG--GAT------CGATGACGA--TGACGACGATGATCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---GT-------------------GTGG------ATT-----------CATATGAATGATGAATG--GCCGAC---TTTAGGGAGTTGGTCCTGGGCGTGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotal
No Reads
droKik1
ACACAC---------ACACGCTCTC-GAA-TCACA---------------------CACACACCCCCG-------------ACTCA--CACAC---------------------CACACA--------------CGAAC----------------------C-------GTAAACA---CA--C--C----------------------------------------ACACACACACT--CAACACA----------------------------CC----ACCTTCACA-AACGCA----ACTAATGCATG----CAA----------------------------------AATGATGATGATGAT--GATGAC----------GA--TGACGACGACTACC------------------TTG----------------------------------------ATGGTGTTGAATCGATAACGATAACACGATATCCGGTTTGCGGATGCGGATGTGGATGTGAATGCGGATGTGCTTATGCCGATGCCGGCGGTGTGATGTGATGTGATGCGATGCGATGCGTTGCCATGTGATGATCATGATCGCGACAA--------CC----TAC--------------G------A--------------------------------------TCGCGTAGGGAGTTGGTCGTGGGCCTGGAATCACAGTGCCGCGTGGCAGAGCCGTTGGSizeHit CountTotal NormTotal
No Reads
droFic1
A-AC-------------ACGCTCTC-GAA-CCACC---------------------CAC------------------------------------------------------ACATA------------CACTCGA--AACACACACACCA---------------------------CA--C--C---------ACACACACGT-ACACG------------AACA------C----A-CACACACCAC----------------C-------CC---CACCACTACA-AACGCA----ACTAATGCATG----CAAT---------------------------------AATGACGATGATGAT--GACGC---------------------------CCGAC--CAACCACTGTG--------CCATTGAAATATGATCACGATCACGATCACAACGGTGATGATGATGGAT------------------------------------------------------------------------------------------------------------------------------GAT------GATGATG---A------------------TGTGG------ATGTGGATGATGTGGAAATGGATGTGGATTT--GTGGA-T-GTGTAGGGAATTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotal
No Reads
droEle1
ACA---------------CGCTCTC-GAA-CCACG---------------------CAA-CACCACCACTT-AAACA-----CACA------ACACAAAACAACAACACACACACACA------------CACTTGA------------------------AACAC-ACTT---------------------------------AT-ACT-C------------TACA------------C--CACA----------------------------CC---CA--CCCACA-AACGCA----ACTAATGCATG----CAAT---------------------------------AATGACGATGATGAT--GATGACGCC------------------------------TACCCACTGTG--------CCATTGAAATATGATCACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGAT---GTGATGTAATGATGTAATGATGTGGCTGTGGATG----------------------------TG---GA-T-GTGTAGGGAGTTGGTCGTGGGCCTGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotal
No Reads
droRho1
A-AC-------------ACGCTCTC-GAA-ACACC---------------------CAC-CACCA-------------CCCACACA------ACACA--------------ACACACA------------CACTCGA------------------------AACAC-ACGTAAACACCACAC--------------ACACACATGT-ACA------------------------------C--CACA----------------------------CC---CA--CCCACA-AACGCA----ACTAATGCATG----CAAT---------------------------------AATGACGATGATGAT--GATGATGAC------------------GCCT---------ACCCACTGTG--------CCATTGAAATATGATCACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------GATGATGAT------GAT----AATG------TGATGTGG------ATGTGGA------------------------TG---GA-T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotal
No Reads
droBia1
AAAC-------------ACGCTCTC-GAA-CCACC---------------------CAC-CACCCCCA-------------CCACA--CA----------------------CACATA------------CAC-----------------CA---------------------------CA--C--C---------AC-----------A-C------------TACA------CACA--CCACACA----------------------------CC----AC--CCACAAAACGCA----ACTAATGCATG----CAAT---------------------------------TATGACGATGATGAT--GATGAT----------CATATGAT---GATGGCC-----TAACCACTGT--------------GAAAAATGACCACGAT----------------------------------------------------------------------------------------------------------------------------------------------------------GATGATGATGAT------GTG----GAT--------------G------ATG----------------------------TG---GC-T-GTGTAGGGAATTGGTCGTGGGCATGGAGTCACAATGCCGCGTGGCAGAATCGTTGGSizeHit CountTotal NormTotal
No Reads
droTak1
AAAC-------------ACGCTCTC-GAA-CCACC---------------------CAC-CACCCC--------------CACACA--------------------------CACACA------------CACTCGA------------------------AACTC--CAC---------------------------------GT-ACACG------------TACATACACACA--CA-CCCACA----------------------------CC----AC-CCCACAAAACGCA----ACTAATGCATG----CAAT---------------------------------TATGACGATGACGATGTGATGATGATC------GA--TAATGATGACG-CCG----CAACCACTGTG--------CCATTGAAATGTGATCACAA-------------------------------------------------------------------------------------------------------------------------------------------------------------T------GATGATG---A------------------TATGG------ATG----------------------------TG---GA-T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotal
No Reads
droEug1
CCCAC-------------------------------------------------------CACCCCCA-------------ACACA--CACA----------------------CACACACAAACACATACACTCGA------------------------AACAC-A-----------------------------CACATACGT--------------------------------------ACA----------------------------CC----AC-TCCACAAAACGCA----ACTAATGCATG----CAAT---------------------------------AATGACCATGTTGAT--GATGATGAC-------TATATGACGATGACG-CC--------------------------GTTGATATATGATCACGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTTG----------AT-----------------------G----------------------------TG---GA-T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotal
No Reads
dm3
ACAC-------------ATGCTCTC-AAA-CCACC---------------------AAC-CACCC-------------CACACAC--------------------------ACACACA------------CACTAAA------------------------AACAC-ACAC---------------------------------AT-ACACC------------TACA------CA--TA-CACACA----------------------------TC----A--ACCACA-ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATAATGAT--GATGATGAT-------GA--TGACGACGACGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTACCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................TGAT--GATGATGAT-------GA--TGA....................................................................................................................................................................................................................................................................................................................................................................182012.902580000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155000000000000000000000000000000000000000000000000000000000000000098000000000000000000000000000000000000000000000000000000000000010000000020000000000000000000000000000020000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGAT--GATGATGAT-------GA--TGA....................................................................................................................................................................................................................................................................................................................................................................192010.1520300000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000790000000000030000004100000000000000000000000000000000000000000000000000000000000000068000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTTGGTCGTGGGCA.................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................AC---------------------------------AT-ACACC------------TACA------CA--TA-CACACA----------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGTACCGCGTGGCAGAGTCGT...2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCGTGGGCATGGAAT...........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACGACGACCGAAAA-----------TACTGA...................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGA.............................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTACCGCGTGGCAGAGTC.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................ATCGCA----ACCAATGCATG----CAAT---------------------------------A...........................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGCGTGGCAGAGTC.....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ACGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT....................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAATCACAGTACCGCGTGGCAGA........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCA.................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................T-ACACC------------TACA------CA--TA-CACACA----------------------------TC----A--ACCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTT............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGTACCGCGTGGCAGAGTCGTT..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAG..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGAT------GCT----AA.......................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGAT------GCT----AAT--------------........................................................................................................2611.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGT....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGG....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATCACAGTACCGCGTGGCAGAG.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................C---------------------------------AT-ACACC------------TACA------CA--TA-CACACA----------------------------TC----A--AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGA.......................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGTACCGCGTGGCAGAGTCGTTG.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGG..........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGACGAT------GCT----AAT--------------G------A--------------------------------------T-........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACCGCGTGGCAGAGTCGTTGG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTG...................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAG..................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTA...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTACCGCGTGGCAGAGTCGT...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGG..........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACGACGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------A......................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATGGAATCACAGTACCG.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGTACCGCGTGGCAG.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCGTGGCAGAGTCGTTGG2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACCGCGTGGCAGAGTCGTTGG2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAATCACAGTACCGCGTGG............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAGTTGGTCGTGGGCATGGAATC..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAATCACAGTACCGCGTGGCAGA........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGTGGGCATGGAA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGTGGGCATGGAATCACA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................................................................................TGAT--GATGATGAT-------GA--TGACGA.................................................................................................................................................................................................................................................................................................................................................................21201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100603000000000000000000000000000000000000020000000000000000000000005000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCATGGAATCACAGTACCGCGTGG............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCGTGGGCATGGAATCACA.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTACCGCGTGGCAGAGTCGTTGG2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGG...................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGTACCGCGTGGCAGAGTCGTTGG2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGAT-------GA--TGACGACGACGACCG........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGAT--GATGATGAT-------GA--TGAC...................................................................................................................................................................................................................................................................................................................................................................20200.901800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGAT--GATGATGAT-------GA--TGACG..................................................................................................................................................................................................................................................................................................................................................................20200.70140000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000200000100222000000000000000000000000000000000000010000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGAT--GATGATGAT-------GA--TGAC...................................................................................................................................................................................................................................................................................................................................................................19200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGTGGGCATGG..............................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GAT--GATGATGAT-------GA--TGA....................................................................................................................................................................................................................................................................................................................................................................17200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATGAT--GATGATGAT-------GA--TGACG..................................................................................................................................................................................................................................................................................................................................................................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATGAT--GATGATGAT-------GA--TGA....................................................................................................................................................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100200000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATGAT--GATGATGAT-------GA--TG.....................................................................................................................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AT--GATGATGAT-------GA--TGACG..................................................................................................................................................................................................................................................................................................................................................................18200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................T--GATGATGAT-------GA--TGACGACGACGA...........................................................................................................................................................................................................................................................................................................................................................2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGAT--GATGATGAT-------GA--TGACGA.................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
................................ACC---------------------AAC-CACCC-------------CACACTG--------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................T--GATGATGAT-------GA--TGACGACGA..............................................................................................................................................................................................................................................................................................................................................................21150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................T--GATGATGAT-------GA--TGACGACG...............................................................................................................................................................................................................................................................................................................................................................20170.1220000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGAT--GATGATGAT-------GA--TGACG..................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................T--GATGATGAT-------GA--TGACGA.................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATGAT--GATGATGAT-------GA--TGACGACG...............................................................................................................................................................................................................................................................................................................................................................24100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATGATGAT-------GA--TGACGACGAC.............................................................................................................................................................................................................................................................................................................................................................20110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................TAATGAT--GATGATGAT-------GA--TGACA..................................................................................................................................................................................................................................................................................................................................................................23110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TGAT--GATGATGAT-------GA--TGACGACG...............................................................................................................................................................................................................................................................................................................................................................23120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................GATGAT-------GA--TGACGACGACGAC..........................................................................................................................................................................................................................................................................................................................................................21130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGAT-------GA--TGACGACGACGAC..........................................................................................................................................................................................................................................................................................................................................................19170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................ATGAT-------GA--TGACGACGACG............................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACAC-------------ATGCTCTC-AAA-CCACC---------------------AAC-CACTC-------------CA----CA--------------------------CACACA------------CACCAAA------------------------AACAC-ACAC---------------------------------GT-ACACC------------TACA------CA--TA-CACACA----------------------------CC----AT-CCCACA-ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATAATGAT--GATGAT----------GA--TGACGACGACGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTACCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................ATAATGAT--GATGAT----------GA--TGACG..................................................................................................................................................................................................................................................................................................................................................................2135.0015000015000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGAC............................................................................................................................................2411.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTGGGCATGGAATCACAGTACC..................2511.00101000000000000000
.....................TCTC-AAA-CCACC---------------------AAC-CACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................GACGACGACGACCGAAAA-----------TACTGAT..................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AT--GATGAT----------GA--TGACG..................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................TGAT--GATGAT----------GA--TGACGAC................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................TAATGAT--GATGAT----------GA--TG.....................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
ACAC-------------ATGCTCTC-AAA-CCACC---------------------AAC-CACTC-------------CA----CA--------------------------CACACA------------CACCAAA------------------------AACAC-ACAC---------------------------------GT-ACACC------------TACA------CA--TA-CACACA----------------------------CC----AT-CCCACA-ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATAATGAT--GATGAT----------GA--TGACGACGACGACCGAAAA-----------TACTGATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATGATGACGACGAT------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTACCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCGTGGGCATGGAATC..........................2011.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------GCT----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGT.........................................2611.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAATCACAGTACCGCGTGGC...........2211.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAATCACAGTACCGCG...............1911.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGGTCGTGGGCATGGA.............................2011.0010100
...........................................................................................................................................................................................................................................................................................................................................................................ATGAT--GATGAT----------GA--TGACGACGAC.............................................................................................................................................................................................................................................................................................................................................................2340.2511000
.............................................................................................................................................................................................................................................................................................................................................................................GAT--GATGAT----------GA--TGACGACGACG............................................................................................................................................................................................................................................................................................................................................................2260.1710100
droYak3
TGCAAC--------AACACACTCAC-ACA-C--TC---------------------ACA-CACAC-------------CACACCC--------------------------ACACACA------------CACTCAA------------------------AACAC-ACTC---------------------------------GT-ACACCAACACCAACTCCGACA------CA--CA-CACACC----------------------------CC----AT-CCCAC--ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATGATGAT--GATGATGAC---------------------GACCGAAAA-----------TTCTGATC----------------ACTATCAC-------------------------------------------------------------------------------------------------------------------------------------------------------TAT------GATGACGATGCG----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGATGCG----AAT--------------G------A--------------------------------------T-GTGTAGGGA...............................................2411.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACGATGCG----AAT--------------G------A--------------------------------------T-GTGTAG..................................................2311.00100000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCGTGGCAGAGTCGTT..1911.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACAGTGCCGCGTGGCAGAGT......2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-------------------------------------------------------------------------------------------------------------------------------------------------------TAT------GATGACGATGCG----AAT--------------G------A--------------------------------------T-GT......................................................2511.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................GAT--GATGATGAC---------------------GACCGAAAA-----------TTCTGATC----------------.................................................................................................................................................................................................................................................................................................................2911.00110000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------GATGACGATGCG----AAT--------------G------A--------------------------------------T-GT......................................................2211.00100000010000
droEre2
ACAC-------------ATGCTCTT-AAA-CCACC---------------------AAC-CACTC-------------CACACAC--------------------------ACACACT------------CACTCAA------------------------AACACCACTC---------------------------------GT-ACACC------------GACA-------A--CA-CACACC----------------------------CC----AT-CCCACA-ATCGCA----ACCAATGCATG----CAAT---------------------------------AATGACCATGATGAT--GATGATGAC---------------------GACCTAAAA-----------TACTGATC----------------ACTATCAC-------------------------------------------------------------------------------------------------------------------------------------------------------TAT------GATGACGATGCG----AAT--------------G------A--------------------------------------T-GTGTAGGGAGTTGGTCGTGGGCATGGAATCACAGTGCCGCGTGGCAGAGTCGTTGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTTGGTCGTGGGCATGGA.............................2211.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTTGGTCGTGGGCAT................................1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAATCACAGTGCCGCGTG.............2111.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGTGGGCATGGAAT...........................2011.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGTGCCGCGTGGCAGAGTCGT...2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGTGGGCATGGAA............................1911.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................GAT--GATGATGAC---------------------GACCTAAAA-----------TACTGATC----------------.................................................................................................................................................................................................................................................................................................................2911.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATGCG----AAT--------------G------A--------------------------------------T-GTGTAG..................................................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGAATCACAGTGCCGCGTGGC...........2411.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTTGGTCGTGGGCA.................................1811.0010000010

Generated: 05/18/2015 at 05:54 AM