ID:

dwi_2982

 Coordinate:

scf2_1100000004921:1509776-1510004 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dwil\GK22508-cds]; exon [dwil_GLEANR_5723:7]; CDS [Dwil\GK22508-cds]; exon [dwil_GLEANR_5723:6]; intron [Dwil\GK22508-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAGAAGTCGAGGCAGAGGCAGTGCATCGTGCTTGCGTTTTGGCCCATCAGGTAGGATTCGTCTCCACATTGGCAGTTGTATAGAAGAAATATATATGGAAGAAAGGGGATAAATATGTTTTGCTAGTTGTGTATACTTACTTACCACAAATTTTGTAATTATATTTTTATTTATTTTGATTTTTATTATTTCCATTATGTATGATGTATGATGCACCCTCCTTGTACATATATATGCGGTATGCGGCACTCGATATACATATGTGTATATATAATTTAGGTCGATTGCCCACTGTATGTGGTCCATGTAATGTCCAAGTCGGCGGGCAT
**************************************************(((.((((.(((........))))))).)))....((((((.(((.(((..((((.(((((((.((((.((((...(((((((........)).))))).....))))..)))).))))))).))))..))).)))))))))(((..((((((.((((((.((((.......))))))))))))))))..))).........(((((((....))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V119
head
 M045
female body
 V118
embryo
.............AGAGGCAGTGCATCGTGCTTGC...................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0
............CAGAGGCAGTGAATGGTGC.......................................................................................................................................................................................................................................................................................................... 19 2 3 0.33 1 0 1 0
..................................CGTTTTAGCTCAGCAGGTAG................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 1 0 0
...........................................................................................TATTGGGAAGAAAGGGGA............................................................................................................................................................................................................................ 18 2 10 0.10 1 0 1 0
.....................................................................................GTAAAATACATGGAAGAAAGG............................................................................................................................................................................................................................... 21 3 13 0.08 1 0 0 1
...................................GTTTTAGCTCAGCAGGTAG................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0

Anti-sense strand reads

TTCTTCAGCTCCGTCTCCGTCACGTAGCACGAACGCAAAACCGGGTAGTCCATCCTAAGCAGAGGTGTAACCGTCAACATATCTTCTTTATATATACCTTCTTTCCCCTATTTATACAAAACGATCAACACATATGAATGAATGGTGTTTAAAACATTAATATAAAAATAAATAAAACTAAAAATAATAAAGGTAATACATACTACATACTACGTGGGAGGAACATGTATATATACGCCATACGCCGTGAGCTATATGTATACACATATATATTAAATCCAGCTAACGGGTGACATACACCAGGTACATTACAGGTTCAGCCGCCCGTA
**************************************************(((.((((.(((........))))))).)))....((((((.(((.(((..((((.(((((((.((((.((((...(((((((........)).))))).....))))..)))).))))))).))))..))).)))))))))(((..((((((.((((((.((((.......))))))))))))))))..))).........(((((((....))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total V119
head
 M045
female body
 V117
male body		 V118
embryo
 M020
head
.......................................ACCGCGTAGACCATCCTAAGC............................................................................................................................................................................................................................................................................. 21 2 1 74.00 74 74 0 0 0 0
.......................................ACCGCGTAGACCATCCTAAGCT............................................................................................................................................................................................................................................................................ 22 3 6 17.50 105 90 3 3 9 0
.......................................ACCGCGTAGACCATCCTAA............................................................................................................................................................................................................................................................................... 19 2 5 7.40 37 36 1 0 0 0
.......................................ACCGAGTCGACCATCCTAAGC............................................................................................................................................................................................................................................................................. 21 3 12 5.83 70 67 0 2 1 0
.......................................ACCGCGTAGACCATCCTAAG.............................................................................................................................................................................................................................................................................. 20 2 3 4.67 14 14 0 0 0 0
.......................................ACCGCGTTGACCATCCTAAGC............................................................................................................................................................................................................................................................................. 21 3 13 1.85 24 23 0 0 1 0
.......................................ACCGCGTAGACCATCCTAGGC............................................................................................................................................................................................................................................................................. 21 3 11 1.64 18 18 0 0 0 0
.......................................ACCGCGTCGTCCATCCTAAGC............................................................................................................................................................................................................................................................................. 21 2 4 1.25 5 5 0 0 0 0
.......................................ACCGCGTAGACCATCCTGAGC............................................................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0
.......................................ACCACGTAGACCATCCTAAGC............................................................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0
.......................................ACCGCGTCGACCATCCTAAGCAGAG......................................................................................................................................................................................................................................................................... 25 3 1 1.00 1 0 1 0 0 0
.......................................ACCGGGTCGACCATCCTAAGCT............................................................................................................................................................................................................................................................................ 22 3 6 1.00 6 3 0 2 1 0
.......................................ACCGAGGCGTCCATCCTAAG.............................................................................................................................................................................................................................................................................. 20 3 1 1.00 1 0 1 0 0 0
.......................................CCCGGGTCGACCATCCTAAGCA............................................................................................................................................................................................................................................................................ 22 3 1 1.00 1 0 0 1 0 0
.......................................ACCGGGTCGACCATCCTAAGC............................................................................................................................................................................................................................................................................. 21 2 1 1.00 1 1 0 0 0 0
.......................................ACCGCGTAGACAATCCTAAGC............................................................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0
.......................................ACCGCATAGACCATCCTAAGC............................................................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0
.......................................ACCGCGTTGTCCATCCTAAG.............................................................................................................................................................................................................................................................................. 20 2 2 0.50 1 1 0 0 0 0
.......................................ACCGGGTAGACCATCCTAG............................................................................................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0
.......................................ACCGCGTAGAACATCCTAAGC............................................................................................................................................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0
.......................................ACCGGGTCGACCATCCTAAG.............................................................................................................................................................................................................................................................................. 20 2 3 0.33 1 1 0 0 0 0
.................................................CCATCCTAGGCATAGATG...................................................................................................................................................................................................................................................................... 18 3 20 0.30 6 0 1 0 0 5
.......................................ACCGCGTAGACCATCCTAATC............................................................................................................................................................................................................................................................................. 21 3 4 0.25 1 1 0 0 0 0
.......................................ACCGCGTAGACCATCCTACGC............................................................................................................................................................................................................................................................................. 21 3 4 0.25 1 1 0 0 0 0
.......................................ACCGAGTAGACCATCCTATGC............................................................................................................................................................................................................................................................................. 21 3 5 0.20 1 1 0 0 0 0
.......................................ACCGAGTAGACCATCCTA................................................................................................................................................................................................................................................................................ 18 2 6 0.17 1 1 0 0 0 0
.......................................ACCGGGTCGACCATCCTAGGC............................................................................................................................................................................................................................................................................. 21 3 12 0.17 2 2 0 0 0 0
.......................................ACCGCGTAGACCATCCTAAT.............................................................................................................................................................................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0
.......................................ACCTCGTCGTCCATCCTAAGC............................................................................................................................................................................................................................................................................. 21 3 9 0.11 1 1 0 0 0 0
........................................CCGCGTAGACCATCCTAAGCT............................................................................................................................................................................................................................................................................ 21 3 11 0.09 1 1 0 0 0 0
.......................................ACCGCGTCGTCCATCCTAAG.............................................................................................................................................................................................................................................................................. 20 2 12 0.08 1 0 0 0 1 0
.......................................GCCGCGTAGACCATCCTAA............................................................................................................................................................................................................................................................................... 19 3 17 0.06 1 1 0 0 0 0
.........................................CGCGTAGACCATCCTAGGC............................................................................................................................................................................................................................................................................. 19 3 19 0.05 1 1 0 0 0 0
.......................................ACCGCGCAGACCATCCTAA............................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0
.......................................ACCGAGGCGTCCATCCTA................................................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 1 0 0 0
.......................................................................AGTCAACACATCTGCTTTA............................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
....TCAGCTCCAACTCCGTGAC.................................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004921:1509726-1510054 - dwi_2982 AAGAAGTCGAGGCAGAGGCAGTGCATCGTGCTTGCGTTTTGGCCCATCAGGTAGGATTCGTCTCCA-------------------------------CA------------T-----TGGCAGTTG----TATAGAA-------------GAAATATA-------------TATGGA---------AG---------------------AAA---GGGGATAAAT--------------ATGTT-TTGCTAGTTGTGTA---TA-CT---TA-------------------------CT-------TACC---ACAA---ATTTTGTAATTAT--A-TTTT----------------TATT--TA---TTTTGAT----------T-T-TTATTATTT-----CCATTATGTATG-ATGTATGATGCACCCTCCTTGTACATAT--------ATATGCGGTATGCGGC--ACTCGATATA----CAT--A---TGTG----------------------T----AT--------------------------------------------ATATAATTTAGGTCGATTGCCCACTGTATGTGGTCCATGTAATGTCCAAGTCGGCGGGCAT
droVir3 scaffold_12855:10033041-10033403 - dvi_4618 AGGAAGTTGAAGCAGAGGCTGTACACCGCGCTTGCATTTTAGCCCACCAGGTAAGTATTTTAT---TTAAATAAAATGTACGAATGCA---------CA------------TTTAGTC-AAAATTG----TATAAA--ATAAA-GCTCGT----------GGG-------A----------ACTAGGGAA--------------------AT-GTTACAAT--AA--------------ATGTACATATACATAT---GT-------------------------------------------------T---ACT-------TGTTAA---T--T-GTTTATT------------------T--TGTTTTTAAT----------T-TATTATTATTT-----CCATTAAGTATG-ATGCA-------CTC---TTGTACATAAATAAGAATGTATGCGGTATGTGGC--ACTTGATAATACTCCA----ATAAATA----------------------T----A-------------------ACCCCCGATGCTGCACTTTTAAAAATAT--A---AATTTTGATTGCCTGATACATGTA-CTCATATTATGTGCAAATTAAATGGCAT
droMoj3 scaffold_6540:3987583-3987864 - AGGAAGTTGAAGCCGAGGCTGTACACCGCGCATGCATTTTAGCCCACCAGGTGAGT--ATTTTTAAAATG--------TTT-----CTCTGACAAAGAAAGACCAAATAAATTTAGTTGAAAGTTG----TATAAA--TTAAATGCTCGT----------G-G-------A----------TCTTGGGAAATGTTACAATATACAATATAAT---GTACATAAAT--------------AT--------------------------------------------------------------------A---TTT-------CTTTAA-------------TTG--------ATGATTTA----CTTTTTTAAT----------T-TATTATTATTT-----CCATTATGTATG-ATGCA-------CCC---TTGTACATAAATAAGAATGTATGCGGTTTGTGGC--ACTTGATATA-------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15245:1102740-1102972 - AGGAAGTGGAAGCGGAGGCCGTAAATCGTGCTTGTATTTTGGCTCATCAGGTGAGTTAAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTAAAAA--TA-ATGTGGATATTGATAAATATCTGAATTGTAAA----------ACT---TGC-------TTG----CAA--G-CTTAAAAAAATTAAATATATTATCC--------------------------------------------------------------------------------------------ATGCGGTTTATT----------TATA----CAT--T---TATT----------------------T----AT-----------T--------------GT-T------------------TACCAAGGTTGATTGTCCCCTTTATGTGGTCCACTGTATGAGCAAATCGGCTGGAAT
dp5 2:23663557-23663922 + AGGAGGTGGAGGCCGAGGCGGTGCATCGCGCCTGCGTTCTGGCCCACCAGGTAAGAC-ACTCCCAAGTCG-------------------------------------------------TTTGTTAAACCATTGAGA-------------G--------------------------------------------------------------AGGGCGGT--GTATAGCAAAAGAGTT--------------------GTACA-GT---TC-------------------------CTG------TACG---ACGCGGAA--CTGTAATTAT--AAATTTATCT--------ACGCTGTA--TATTCTTTTAAT----------TTTGTTATTATTTCTTACCCATTGTGCATG-ATGCA-------CTC---TTGTACATAT--TATGCGGTATGCGGTATGCGGCACACACGATATAACCCCT------------ACCAACATA----TA-ATACGAATGTATCTA----TATCCGATATGA-------TGGTGCCCT---------------AAAAGTCCGATTGCCCGCTGTATGTGGTTCATGTGATGAGCAAATCGGCGGGCAT
droPer2 scaffold_3:6440656-6441025 + AGGAGGTGGAGGCCGAGGCGGTGCATCGCGCCTGCGTTCTGGCCCACCAGGTAAGAC-ACTCCCAAGTCG-------------------------------------------------TTTGTTAAACCATTGAGA-------------G--------------------------------------------------------------AGGGCGGT--GTATAGCAAAAGAGTT--------------------GTACA-GT---TC-------------------------CTG------TACG---ACGCGGAA--CTGTAATTAT--ACATTTATCT--------ACGCTGTA--TATTCTTTTAAT----------TTTGTTATTATTTCTTACCCATTGTGCATG-ATGCA-------CTC---TTGTACATAT--TATGCGGTATGCGGTATGCGGCACACACGATATAACCCCT------------ACCAACATACATATA-ATACGAATGTATCTA----TATCCGATATGA-------TGGTGCCCT---------------AAAAGTCCGATTGCCCGCTGTATGTGGTTCATGTGATGAGCAAATCGGCGGGCAT
droAna3 scaffold_13088:522286-522599 - dan_1216 AGGAGGTCGAGGCCGAGGCAGTGCACCGCGCATGCGTCCTAGCCCACCAGGTGAGTCCG----------------------------------------------------------------ACG---G--TGG--------------------------------------------------------------------------------AGTGGT--G-----------------------------------------GT---T-----GCAGGGTGTGGGAGTAGGAAG----------GCT---GAC-------CTGTAATT------GGTTATTT--------GTTTTAAA--TA---TTTTTATTTATTATAATT-TTTTATTATTT-----TCATTGTGTATG-ATGCA-------CT----CTGTACATAT--TA-------TGCGGTATGCGGC--ACTTGACATAACCCCAC--AATAC------CCACTT--------------------CGATACCCAACCGATTTGAT--CTGGGGCT-------------------GATCAGGCCGCTTGTCCCCTGTATGTGGTCCATGTGATGAGCAAGTCGGCGGGCAT
droBip1 scf7180000396413:577637-577960 - AGGAAGTCGAGGCCGAGGCAGTGCATCGCGCATGCGTTCTAGCCCACCAGGTGAGTCCGAT------------------------------------------------------------------------G-----------------GAATGGTGTGGAATG----------A-----------------------------------------------------------------------------------------------------AGGGTGTGGGAATAGGAAG----------TTTGTCCTC-------CTGTAATTAT--T-GTTTATTT--------ATTTTTAA--AACTTTTTTGATTTATTATTATT-TTTTATTATTT-----TCATTGTGTATG-ATGCA-------CAC---TTGTACATAT--TA-------TGCGGTATGCGGC--ACTTGATATAACCTCAC--AATAC------CCACTT--------------------CGATCCCCAACCGATTTGAT--CTGGGGCT-------------------GATCAGGCCGCTTGTCCCCTGTATGTGGTCCATGTGATGAGCAAGTCGGCGGGCAT
droKik1 scf7180000302461:828366-828721 + AGGAAGTCGAGGCAGAGGCCGTACACCGCGCCTGCGTTCTGGCCCACCAGGTAAGACCACTCCCAAGT-G----------C-----CGGTGA---------------------------CTAGCC--------G----------------GCGTCAGA-------------GGAG---AGTT-GAGAG----------------------CG-TGAGTGGT--GG--------------ATGTGGATGTCGGTAGCGGGC--CA-G-------------------------------CTGAAAAAAGGCT---GTG-------CTGTAATTAT--C-CTTTATTTAT------ATGTTACA--CC---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CCC---TTGTACATAT--TAT---ATATGCGGTATGCGGC--ACTCGATATAACCCCTC--GATATA-------------------AT-CGAATATCCCGA----CTCCC--------------GG-----CT---------------ACCAGGCCGCTTGTCCACTGTATGTGGTCCACGTGATGAGCAAGTCGGCGGGAAT
droFic1 scf7180000453850:800067-800391 + AGGAGGTGGAGGCCGAGGCGGTGCACCGCGCCTGCGTGCTGGCCCACCAGGTAAGACCACTCCCAGCCCAATA-----------------GG---------------------------CTAGACA---CTCTGGGA-------------GGGACTG----------------------------AGG----------------------AT-GAGGTGGT--GA--------------ATGTCCATGCCGGCCGAGTGC-------------------------------------------------C---GCG-------CTGTAATTAT--G-GTTTATTT--------ACGTTACA--CA---TTTTGATTTCTTA----T-TATTATTATTT-----CCATTGTGTATG-ATGCA-------CC----TTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------A------------------------------------------------------ATGTTAGGCCGCTTGCCCCTTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCAT
droEle1 scf7180000491021:44352-44714 - AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGTGTGCTGGCCCATCAGGTAAGAGCACGAGCA------------------------------------------------------CGAGATA---CTCTGGGA-------------GGGACGGT-----ACTC------------------TGG----------------------AG-GCGGCGGT--GT------------TTGTGTCCATGCCGGCCAAGTGC--CA-GT---CA-------------------------CTG------CGCC---GG-----A--CTGTAATTACTTATGTTTATTT--------ATGTTACA--CA---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CCCT--TTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--CATAAACGTACCTACATATATATATATATATATATAT--------------------------------------------GT--ATATTAGGCCGCTTGTCCGCTGTACGTGGTGCACGTGATGAGCAAGTCGGCCGGCAT
droRho1 scf7180000767094:2327-2657 + AGGAAGTGGAGGCCGAGGCCGTGCACCGCGCCTGCGTGCTGGCCCACCAGGTAAGACCACTCCCAAGGCG-------------------------------------------------CTAGTTA---CTCTGGGA-------------GGGACTC----------------------------AGG----------------------AG-GCGGCGGT--GT--------------GTGTCCACGCGGGCTAAGTGC--CA-GT---CA-------------------------CTT------GGCC---GGG-------CTGTAATTAC--G-GTTTATTT--------ATGTTACA--CA---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CCC---TTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCCC--AATAAACG----------------------T----AC--------------------------------------------AT--ATATTAGGCCGCTTGTCCGCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCAT
droBia1 scf7180000302155:3370182-3370505 - AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCTTGCGTGCTGGCCCACCAGGTAAGACCACTCCCAAGTCG-------------------------------------------------CTAGACA----TCTGGGA-------------GGGACGGA-------------GGAGGA---------GG----------------------CG-GCGGCGGT--GT--------------ATGTCCATGCCGGCTGAGTGC--CA-GT---CA-------------------------CTG------GGCC---GCG-------CTGTAATTAT--G-GTTTATTT--------ACGTTACA--CA---TTTTCAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CC----TTGTACATAT--TA-------TGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------ATGTTAGGCGGCCTGTCCGCTCTACGTGGTGCACGTGATGAGCAAGTCGGCGGGCAT
droTak1 scf7180000415754:397760-398087 - AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCATGTGTACTGGCCCACCAGGTAAGACCACTCCCAAGTCG-------------------------------------------------CTAGTTA----ACTAGGA-------------GGGACGGA-------------GGAGGA---------GG----------------------AG-GAGGCGGT--GT--------------ATGTCCTTGCCGGTGGAGTGC--CA-GT---CA-------------------------CTG------CACC---GAG-------CTGTAATTAT--G-GTTTATTT--------ATGTTACA--CA---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CC----TTGTACATAT--TA-------TGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T----AT--------------------------------------------GT--ACATTAGGCCGATTGTCCGCTCTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCAT
droEug1 scf7180000409766:352333-352656 + AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGCGTGCTGGCGCACCAGGTAAGACCACTTCCAATTCG-------------------------------------------------TTAGATA----TCTG-GA-------------GGGACGGA-------------GGAGA---------TGG----------------------AA-GAGGAGGT--GT--------------ATGTCCTTGCCGGTTCAGTGC--CA-GT---CA-------------------------CTG------TGCC---GCG-------CTGTAATTAT--G-GTTTATTT--------ATGCTACA--CG---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CCC---TTGTACATAT--TA-------TGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------ATATTAGGCCGCTTGTCCGCTGTATGTGGTCCACGTGATGAGCAAGTCGGCAGGCAT
dm3 chr3R:1401598-1401946 + AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGCGTCCTGGCCCACCAGGTAAGACCACTCCCATGTCG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGGAT-GGGAAGAG---GGAGGA--------AGG----------------------AG-GAGGCGGA--GT--------------GTGTCCATGCCGGTTGAGTGC--CA-TTGTGCA-------------------------CTG------TGCC---GCGC---A--CTGTAATCAT--G-GTTTATTTATTTATGTATGTTATTTA--TGATTTTGAT----------T-TCCTATTATTT-----CCATTGTGTATG-ATGCA-------CC----CTGTACATAT--TA-------TGCGGTATGCGGC--ACTCGATATAACCCCACGAAAAAAACA----------------------T------------------------------------------------------AACCTAGGCCGATTGTCCCCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCAT
droSim2 3r:1296738-1297098 + dsi_15801 AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGCGTCCTGGCCCACCAGGTAAGACCACTCCCATGTCG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGTAT-GGGAAGTGGGAGG---AGGGAG-AAGGG----------------------AG-GAGGCGGT--GT--------------GTGTCCATGCCGGTTGAGTGC--CA-CTGTGCA-------------------------CTG------TGCC---GCGC---A--CTGTAATCAT--G-GTTTATTTAATTATGTATGTTATTTA--TGATTTTGAT----------T-TCCTATTATTT-----CCATTGTGTATG-ATGCA-------CC----CTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------AACCTAGGCCGATTGTCCCCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCAT
droSec2 scaffold_6:1516478-1516748 + dse_1460 T-------------------------------------------------------------------CG----------------CC--------------------------------CGGACA---G--TGGG---------------AGATGTAT-GGGAAGTGGGAGG---AGGGAG-AAGGG----------------------AG-GAGGCGGT--GT--------------GTGTCCATGCCGGTTGAGTGC--CCACTCTGCA-------------------------CTG------TG--------------TATGTTATTAT--G---TTATTT--------AT-----------GATTTTGAT----------T-TCCTATTATTT-----CCATTGTGTATG-ATGCA-------CC----CTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------AACCTAGGCCGATTGTCCCCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCAT
droYak3 3R:17365471-17365818 + AGGAGGTCGAGGCCGAGGCGGTGCATCGCGCCTGCGTCCTGGCCCACCAGGTAAGACCACTCCCATGTCG-------------------------------------------------CTAGTCA---G--TGGGAT------------GAGACGGAT-GGGAAG----------A-------ATGG----------------------GAGCGGACGGT--GT--------------GTGTCCATGCCGGTTGAGTGT--CA-CT---CA-------------------------CTC----AATGCC---GCGC---A--TTGTAATCAT--G-GTTTATTTATTT----ATGTTATTTT--TGATTTTGAT----------T-TCTTATTATTT-----CCATTCTGTATG-ATGCA-------CCC---CTGTACATAT--TATGCGGTATGTGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------AACTTAGGCCGATTGTCCCCTCTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCAT
droEre2 scaffold_4770:1671486-1671826 + AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGCGTCCTGGCCCACCAGGTAAGACCACTCCCATGTCA-------------------------------------------------CTAGTCA---G--TGG----------------GGACGGA-----AAAAA---AGAGGA---------------------------------AC-AAGACGGT--GT--------------GTGTCCATGCCGGTGGAGTGC--CA-GT---CA-------------------------CTG------TGCC---GCGC---A--CTGTAATCAT--G-GTCTATTTATTT----ATGTTATTTT--TGATTTTGAT----------T-TCTTATTATTT-----CCATTCTGTATGTATGCA-------CCC---CTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------AATTTAGGCCGATTGCCCCCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AAGAAGTCGAGGCAGAGGCAGTGCATCGTGCTTGCGTTTTGGCCCATCAGGTAGGATTCGTCTCCA-------------------------------CA------------T-----TGGCAGTTG----TATAGAA-------------GAAATATA-------------TATGGA---------AG---------------------AAA---GGGGATAAAT--------------ATGTT-TTGCTAGTTGTGTA---TA-CT---TA-------------------------CT-------TACC---ACAA---ATTTTGTAATTAT--A-TTTT----------------TATT--TA---TTTTGAT----------T-T-TTATTATTT-----CCATTATGTATG-ATGTATGATGCACCCTCCTTGTACATAT--------ATATGCGGTATGCGGC--ACTCGATATA----CAT--A---TGTG----------------------T----AT--------------------------------------------ATATAATTTAGGTCGATTGCCCACTGTATGTGGTCCATGTAATGTCCAAGTCGGCGGGCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............AGAGGCAGTGCATCGTGCTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
droVir3
AGGAAGTTGAAGCAGAGGCTGTACACCGCGCTTGCATTTTAGCCCACCAGGTAAGTATTTTAT---TTAAATAAAATGTACGAATGCA---------CA------------TTTAGTC-AAAATTG----TATAAA--ATAAA-GCTCGT----------GGG-------A----------ACTAGGGAA--------------------AT-GTTACAAT--AA--------------ATGTACATATACATAT---GT-------------------------------------------------T---ACT-------TGTTAA---T--T-GTTTATT------------------T--TGTTTTTAAT----------T-TATTATTATTT-----CCATTAAGTATG-ATGCA-------CTC---TTGTACATAAATAAGAATGTATGCGGTATGTGGC--ACTTGATAATACTCCA----ATAAATA----------------------T----A-------------------ACCCCCGATGCTGCACTTTTAAAAATAT--A---AATTTTGATTGCCTGATACATGTA-CTCATATTATGTGCAAATTAAATGGCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................ATAAA-GCTCGT----------GGG-------A----------ACTAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.005000001000000000000000000000000010300000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGCGGTATGTGGC--AC...............................................................................................................................................................1912.002000000000020000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATAAGAATGTATGCGGT..........................................................................................................................................................................2112.002000000000000000000000000011000000000000000000000000000000000000
...................................................................................................................................ATAAA--ATAAA-GCTCGT----------GGG-------A----------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
..........AGCAGAGGCTGTACACCGCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTA-CTCATATTATGTGCA.............2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AAA-GCTCGT----------GGG-------A----------ACTAGGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGCGGTATGTGGC--ACTTC............................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AATTTTGATTGCCTGATAC..................................2011.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGATACATGTA-CTCATAT.....................2111.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCTGATACATGTA-CTCA........................2011.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATGCGGTATGTGGC--AC...............................................................................................................................................................2011.001000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGC--ACTTGATAATACTCC..................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................A--ATAAA-GCTCGT----------GGG-------A----------ACTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGATTGCCTGATACAT................................2111.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................AAA-GCTCGT----------GGG-------A----------ACTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGCGGTATGTGGC--ACTTG............................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTG----TATAAA--ATAAA-GCTCGT----------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTATGCGGTATGTGGC--AC...............................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCGGTATGTGGC--ACTTGA...........................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.............AGAGGCTGTACACCGCGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
.........................CCGCGCTTGCATTTTAGCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..........AGCAGAGGCTGTACACCGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATA----------------------T----A-------------------ACCCCCGATGCTGC.........................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................AA--ATAAA-GCTCGT----------GGG-------A----------ACTAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATG-ATGCA-------CTC---TTGTACATA............................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAGTATG-ATGCA-------CTC---TTG..................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCTGATACATGTA-CTCA........................2111.001000000000000000000000000000000100000000000000000000000000000000
droMoj3
AGGAAGTTGAAGCCGAGGCTGTACACCGCGCATGCATTTTAGCCCACCAGGTGAGT--ATTTTTAAAATG--------TTT-----CTCTGACAAAGAAAGACCAAATAAATTTAGTTGAAAGTTG----TATAAA--TTAAATGCTCGT----------G-G-------A----------TCTTGGGAAATGTTACAATATACAATATAAT---GTACATAAAT--------------AT--------------------------------------------------------------------A---TTT-------CTTTAA-------------TTG--------ATGATTTA----CTTTTTTAAT----------T-TATTATTATTT-----CCATTATGTATG-ATGCA-------CCC---TTGTACATAAATAAGAATGTATGCGGTTTGTGGC--ACTTGATATA-------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGGAAGTGGAAGCGGAGGCCGTAAATCGTGCTTGTATTTTGGCTCATCAGGTGAGTTAAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTAAAAA--TA-ATGTGGATATTGATAAATATCTGAATTGTAAA----------ACT---TGC-------TTG----CAA--G-CTTAAAAAAATTAAATATATTATCC--------------------------------------------------------------------------------------------ATGCGGTTTATT----------TATA----CAT--T---TATT----------------------T----AT-----------T--------------GT-T------------------TACCAAGGTTGATTGTCCCCTTTATGTGGTCCACTGTATGAGCAAATCGGCTGGAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
AGGAGGTGGAGGCCGAGGCGGTGCATCGCGCCTGCGTTCTGGCCCACCAGGTAAGAC-ACTCCCAAGTCG-------------------------------------------------TTTGTTAAACCATTGAGA-------------G--------------------------------------------------------------AGGGCGGT--GTATAGCAAAAGAGTT--------------------GTACA-GT---TC-------------------------CTG------TACG---ACGCGGAA--CTGTAATTAT--AAATTTATCT--------ACGCTGTA--TATTCTTTTAAT----------TTTGTTATTATTTCTTACCCATTGTGCATG-ATGCA-------CTC---TTGTACATAT--TATGCGGTATGCGGTATGCGGCACACACGATATAACCCCT------------ACCAACATA----TA-ATACGAATGTATCTA----TATCCGATATGA-------TGGTGCCCT---------------AAAAGTCCGATTGCCCGCTGTATGTGGTTCATGTGATGAGCAAATCGGCGGGCATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGGTATGCGGCACAC...............................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................ATTAT--AAATTTATCT--------ACGCTGTA--T...........................................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGATGAGCAAATCGGCGGGC..2411.0010100000000
droPer2
AGGAGGTGGAGGCCGAGGCGGTGCATCGCGCCTGCGTTCTGGCCCACCAGGTAAGAC-ACTCCCAAGTCG-------------------------------------------------TTTGTTAAACCATTGAGA-------------G--------------------------------------------------------------AGGGCGGT--GTATAGCAAAAGAGTT--------------------GTACA-GT---TC-------------------------CTG------TACG---ACGCGGAA--CTGTAATTAT--ACATTTATCT--------ACGCTGTA--TATTCTTTTAAT----------TTTGTTATTATTTCTTACCCATTGTGCATG-ATGCA-------CTC---TTGTACATAT--TATGCGGTATGCGGTATGCGGCACACACGATATAACCCCT------------ACCAACATACATATA-ATACGAATGTATCTA----TATCCGATATGA-------TGGTGCCCT---------------AAAAGTCCGATTGCCCGCTGTATGTGGTTCATGTGATGAGCAAATCGGCGGGCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGTATGTGGTTCATGTGATGA................2511.001010000
droAna3
AGGAGGTCGAGGCCGAGGCAGTGCACCGCGCATGCGTCCTAGCCCACCAGGTGAGTCCG----------------------------------------------------------------ACG---G--TGG--------------------------------------------------------------------------------AGTGGT--G-----------------------------------------GT---T-----GCAGGGTGTGGGAGTAGGAAG----------GCT---GAC-------CTGTAATT------GGTTATTT--------GTTTTAAA--TA---TTTTTATTTATTATAATT-TTTTATTATTT-----TCATTGTGTATG-ATGCA-------CT----CTGTACATAT--TA-------TGCGGTATGCGGC--ACTTGACATAACCCCAC--AATAC------CCACTT--------------------CGATACCCAACCGATTTGAT--CTGGGGCT-------------------GATCAGGCCGCTTGTCCCCTGTATGTGGTCCATGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................CAGTGCACCGCGCATGCGTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................GCATGCGTCCTAGCCCACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......CGAGGCCGAGGCAGTGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droBip1
AGGAAGTCGAGGCCGAGGCAGTGCATCGCGCATGCGTTCTAGCCCACCAGGTGAGTCCGAT------------------------------------------------------------------------G-----------------GAATGGTGTGGAATG----------A-----------------------------------------------------------------------------------------------------AGGGTGTGGGAATAGGAAG----------TTTGTCCTC-------CTGTAATTAT--T-GTTTATTT--------ATTTTTAA--AACTTTTTTGATTTATTATTATT-TTTTATTATTT-----TCATTGTGTATG-ATGCA-------CAC---TTGTACATAT--TA-------TGCGGTATGCGGC--ACTTGATATAACCTCAC--AATAC------CCACTT--------------------CGATCCCCAACCGATTTGAT--CTGGGGCT-------------------GATCAGGCCGCTTGTCCCCTGTATGTGGTCCATGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotal
No Reads
droKik1
AGGAAGTCGAGGCAGAGGCCGTACACCGCGCCTGCGTTCTGGCCCACCAGGTAAGACCACTCCCAAGT-G----------C-----CGGTGA---------------------------CTAGCC--------G----------------GCGTCAGA-------------GGAG---AGTT-GAGAG----------------------CG-TGAGTGGT--GG--------------ATGTGGATGTCGGTAGCGGGC--CA-G-------------------------------CTGAAAAAAGGCT---GTG-------CTGTAATTAT--C-CTTTATTTAT------ATGTTACA--CC---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CCC---TTGTACATAT--TAT---ATATGCGGTATGCGGC--ACTCGATATAACCCCTC--GATATA-------------------AT-CGAATATCCCGA----CTCCC--------------GG-----CT---------------ACCAGGCCGCTTGTCCACTGTATGTGGTCCACGTGATGAGCAAGTCGGCGGGAATSizeHit CountTotal NormTotal
No Reads
droFic1
AGGAGGTGGAGGCCGAGGCGGTGCACCGCGCCTGCGTGCTGGCCCACCAGGTAAGACCACTCCCAGCCCAATA-----------------GG---------------------------CTAGACA---CTCTGGGA-------------GGGACTG----------------------------AGG----------------------AT-GAGGTGGT--GA--------------ATGTCCATGCCGGCCGAGTGC-------------------------------------------------C---GCG-------CTGTAATTAT--G-GTTTATTT--------ACGTTACA--CA---TTTTGATTTCTTA----T-TATTATTATTT-----CCATTGTGTATG-ATGCA-------CC----TTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------A------------------------------------------------------ATGTTAGGCCGCTTGCCCCTTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotal
No Reads
droEle1
AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGTGTGCTGGCCCATCAGGTAAGAGCACGAGCA------------------------------------------------------CGAGATA---CTCTGGGA-------------GGGACGGT-----ACTC------------------TGG----------------------AG-GCGGCGGT--GT------------TTGTGTCCATGCCGGCCAAGTGC--CA-GT---CA-------------------------CTG------CGCC---GG-----A--CTGTAATTACTTATGTTTATTT--------ATGTTACA--CA---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CCCT--TTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--CATAAACGTACCTACATATATATATATATATATATAT--------------------------------------------GT--ATATTAGGCCGCTTGTCCGCTGTACGTGGTGCACGTGATGAGCAAGTCGGCCGGCATSizeHit CountTotal NormTotal
No Reads
droRho1
AGGAAGTGGAGGCCGAGGCCGTGCACCGCGCCTGCGTGCTGGCCCACCAGGTAAGACCACTCCCAAGGCG-------------------------------------------------CTAGTTA---CTCTGGGA-------------GGGACTC----------------------------AGG----------------------AG-GCGGCGGT--GT--------------GTGTCCACGCGGGCTAAGTGC--CA-GT---CA-------------------------CTT------GGCC---GGG-------CTGTAATTAC--G-GTTTATTT--------ATGTTACA--CA---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CCC---TTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCCC--AATAAACG----------------------T----AC--------------------------------------------AT--ATATTAGGCCGCTTGTCCGCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotal
No Reads
droBia1
AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCTTGCGTGCTGGCCCACCAGGTAAGACCACTCCCAAGTCG-------------------------------------------------CTAGACA----TCTGGGA-------------GGGACGGA-------------GGAGGA---------GG----------------------CG-GCGGCGGT--GT--------------ATGTCCATGCCGGCTGAGTGC--CA-GT---CA-------------------------CTG------GGCC---GCG-------CTGTAATTAT--G-GTTTATTT--------ACGTTACA--CA---TTTTCAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CC----TTGTACATAT--TA-------TGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------ATGTTAGGCGGCCTGTCCGCTCTACGTGGTGCACGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotal
No Reads
droTak1
AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCATGTGTACTGGCCCACCAGGTAAGACCACTCCCAAGTCG-------------------------------------------------CTAGTTA----ACTAGGA-------------GGGACGGA-------------GGAGGA---------GG----------------------AG-GAGGCGGT--GT--------------ATGTCCTTGCCGGTGGAGTGC--CA-GT---CA-------------------------CTG------CACC---GAG-------CTGTAATTAT--G-GTTTATTT--------ATGTTACA--CA---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CC----TTGTACATAT--TA-------TGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T----AT--------------------------------------------GT--ACATTAGGCCGATTGTCCGCTCTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotal
No Reads
droEug1
AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGCGTGCTGGCGCACCAGGTAAGACCACTTCCAATTCG-------------------------------------------------TTAGATA----TCTG-GA-------------GGGACGGA-------------GGAGA---------TGG----------------------AA-GAGGAGGT--GT--------------ATGTCCTTGCCGGTTCAGTGC--CA-GT---CA-------------------------CTG------TGCC---GCG-------CTGTAATTAT--G-GTTTATTT--------ATGCTACA--CG---TTTTGAT----------T-TCTTATTATTT-----CCATTGTGTATG-ATGCA-------CCC---TTGTACATAT--TA-------TGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------ATATTAGGCCGCTTGTCCGCTGTATGTGGTCCACGTGATGAGCAAGTCGGCAGGCATSizeHit CountTotal NormTotal
No Reads
dm3
AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGCGTCCTGGCCCACCAGGTAAGACCACTCCCATGTCG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGGAT-GGGAAGAG---GGAGGA--------AGG----------------------AG-GAGGCGGA--GT--------------GTGTCCATGCCGGTTGAGTGC--CA-TTGTGCA-------------------------CTG------TGCC---GCGC---A--CTGTAATCAT--G-GTTTATTTATTTATGTATGTTATTTA--TGATTTTGAT----------T-TCCTATTATTT-----CCATTGTGTATG-ATGCA-------CC----CTGTACATAT--TA-------TGCGGTATGCGGC--ACTCGATATAACCCCACGAAAAAAACA----------------------T------------------------------------------------------AACCTAGGCCGATTGTCCCCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................GTGTCCATGCCGGTTGAGTGC--.................................................................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000011000000001020000
.................................................................TGTCG-------------------------------------------------CCAGACA---G--TGGG---------------GGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCCGATTGTCCCCTGTACGTGGTC..........................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GAG---GGAGGA--------AGG----------------------AG-GAGGCGGA--G.......................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................CCAGACA---G--TGGG---------------GGATGGAT-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-------TGCGGTATGCGGC--ACTCG............................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGATGAGCAAGTCGGCG.....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTATTT-----CCATTGTGTATG-ATG....................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCACGTGATGAGCAAGTC.........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...............................................................................................................................................................................................................................GT--------------GTGTCCATGCCGGTTGAG......................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATTGTCCCCTGTACGTG.............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GGATGGAT-GGGAAGAG---GGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGATGAGCAAGTCGGC......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
.................................................................................................................................G--TGGG---------------GGATGGAT-GGGAAGAG---GGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AT-GGGAAGAG---GGAGGA--------AG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGTGATGAGCAAGTCGGCGGG...2512.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CC---GCGC---A--CTGTAATCAT--G-GTT...................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAT--TA-------TGCGGTATGCGGC--A................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................................................................................................................................................................................TGTCCATGCCGGTTGAGTGC--CT-..............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................AG---GGAGGA--------AGG----------------------AG-GAGGCA............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TCCATGCCGGTTGAGTGC--CA-TTGTGG........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCCGGTTGAGTGC--CA-TTGT..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................................GATGGAT-GGGAAGAG---GGAGGA--------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATAT--TA-------TGCGGTATGCGGC--.................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------TGCGGTATGCGGC--ACTCGAT..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGGTCCACGTGATGAGCA.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................TGTCG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTGTACGTGGTCCACGTGATGAGC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................ATGTCG-------------------------------------------------CCAGACA---G--TGGG---------------GGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................T--------------GTGTCCATGCCGGTTGAGTGC--.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGCAAGTCGGCGGGC..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------CC----CTGTACATAT--TA-------TGCG............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCCACGTGATGAGCAAGT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TATG-ATGCA-------CC----CTGTACATAT--TA-------TGCGG...........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CTATTATTT-----CCATTGTGTATG-.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................TGC--CA-TTGTGCA-------------------------CTG------TGCC---GC............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGATGAGCAAGTCGGCG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
....................................................................................................................................................................................................................................................CATGCCGGTTGAGTGC--CA-TTGTGC........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCCACGTGATGAGCAAGTC.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AT-GGGAAGAG---GGAGGA--------AGG----------------------AG-GAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA----------------------T------------------------------------------------------AACCTAGGCCGATTGT.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTACATAT--TA-------TGCGGTATG.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCCACGTGATGAGCAA............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TCAT--G-GTTTATTTATTTATGT......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................GACA---G--TGGG---------------GGATGGAT-GGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TGGAT-GGGAAGAG---GGAGGA--------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................T-TCCTATTATTT-----CCATTGTGT...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................TGGG---------------GGATGGAT-GGGAAGAG---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................T-GGGAAGAG---GGAGGA--------AGG----------------------AG-GAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AGAG---GGAGGA--------AGG----------------------AG-GAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................GGAT-GGGAAGAG---GGAGGA--------AGG----------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCCGATTGTCCCCTGTACGTGG............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................GAG---GGAGGA--------AGG----------------------AG-GAGGCGGA--GT--------------G.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCCCCTGTACGTGGTCCACGTGA...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCG-------------------------------------------------CCAGACA---G--TGGG---------------GGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT--TA-------TGCGGTATGCGGC--ACTCGA...........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................CTGCGTCCTGGCCCACCAGGTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGTGATGAGCAAGTCGG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................AT----------T-TCCTATTATTT-----CCATTGT.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GCACCGCGCCTGCGTCCTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACGTGGTCCACGTGATGAGCAAG...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGTGATGAGCAAGTCGGC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.................................................................................................................................G--TGGG---------------GGATGGAT-GGGAAGAG---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TCCATGCCGGTTGAGTGC--CA-TTGT..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................CGGTGCACCGCGCCTGCGTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGGTCCACGTGATGAGCAAGTC.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATAT--TA-------TGCGGTATGCGGC--.................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCGGC--ACTCGATATAACCCCACGAAA............................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCACGTGATGAGCAAGTCG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................CA---G--TGGG---------------GGATGGAT-GGGAAGAG---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTCCCCTGTACGTGGT...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................T-GGGAAGAG---GGAGGA--------AGG----------------------AG-GA................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................................................................................................GT--------------GTGTCCATGCCGGTTGAGT.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................T--------------GTGTCCATGCCGGTTGAGTG....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................A--GT--------------GTGTCCATGCCGGTTGAG......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................T--TA-------TGCGGTATGCGGC--ACTCGATA.........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTCCACGTGATGAGCAAG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................CTCCCATGTCG-------------------------------------------------CCAGACA---G--T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AT-GGGAAGAG---GGAGGA--------AGG----------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................ACA---G--TGGG---------------GGATGGAT-GGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................A---G--TGGG---------------GGATGGAT-GGGAAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGTGATGAGCAAGTCGGCGGGC..2611.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TATTT-----CCATTGTGTATG-ATGC...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................GACA---G--TGGG---------------GGATGGAT-GG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGTCCACGTGATGAGCAA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................GGATGGAT-GGGAAGAG---GGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................CG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................ATGGAT-GGGAAGAG---GGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................GACA---G--TGGG---------------GGATGGAT-GGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGGTCCACGTGATGAGC..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................ATGCCGGTTGAGTGC--CC-C.............................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ATGCCGGTTGAGTGC--CC-A.............................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGCGTCCTGGCCCACCAGGTAAGACCACTCCCATGTCG-------------------------------------------------CCAGACA---G--TGGG---------------GGATGTAT-GGGAAGTGGGAGG---AGGGAG-AAGGG----------------------AG-GAGGCGGT--GT--------------GTGTCCATGCCGGTTGAGTGC--CA-CTGTGCA-------------------------CTG------TGCC---GCGC---A--CTGTAATCAT--G-GTTTATTTAATTATGTATGTTATTTA--TGATTTTGAT----------T-TCCTATTATTT-----CCATTGTGTATG-ATGCA-------CC----CTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------AACCTAGGCCGATTGTCCCCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGATGAGCAAGTCGGCG.....2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGATGAGCAAGTCGGCGGG...2111.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAAGTCGGCGGGCAT1911.00100100000000000000
..............................................................................................................................................................................................................................................................GAGTGC--CA-CTGTGCA-------------------------CTG------TGCC---G.............................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
.....GTCGAGGCCGAGGCGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..............................................................................................................................................................T-GGGAAGTGGGAGG---AGGGAG-................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACATAT--TATGCGGTATGCGGTA.........................................................................................................................................................................2511.00100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGAGCAAGTCGGCGGGC..2111.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACG----------------------T------------------------------------------------------AACCTAGGCCGATTGTCCCC.....................................2511.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACG----------------------T------------------------------------------------------AACCTAGGCCGATTGTC........................................2311.00100000000000001000
droSec2
T-------------------------------------------------------------------CG----------------CC--------------------------------CGGACA---G--TGGG---------------AGATGTAT-GGGAAGTGGGAGG---AGGGAG-AAGGG----------------------AG-GAGGCGGT--GT--------------GTGTCCATGCCGGTTGAGTGC--CCACTCTGCA-------------------------CTG------TG--------------TATGTTATTAT--G---TTATTT--------AT-----------GATTTTGAT----------T-TCCTATTATTT-----CCATTGTGTATG-ATGCA-------CC----CTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------AACCTAGGCCGATTGTCCCCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................T-GGGAAGTGGGAGG---AGGGAG-................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ACTCGATATAACCCCAC--AAT...........................................................................................................................................2111.0010001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCGGTATGCGGTATGCGGC--.................................................................................................................................................................2120.5010001
droYak3
AGGAGGTCGAGGCCGAGGCGGTGCATCGCGCCTGCGTCCTGGCCCACCAGGTAAGACCACTCCCATGTCG-------------------------------------------------CTAGTCA---G--TGGGAT------------GAGACGGAT-GGGAAG----------A-------ATGG----------------------GAGCGGACGGT--GT--------------GTGTCCATGCCGGTTGAGTGT--CA-CT---CA-------------------------CTC----AATGCC---GCGC---A--TTGTAATCAT--G-GTTTATTTATTT----ATGTTATTTT--TGATTTTGAT----------T-TCTTATTATTT-----CCATTCTGTATG-ATGCA-------CCC---CTGTACATAT--TATGCGGTATGTGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------AACTTAGGCCGATTGTCCCCTCTACGTGGTCCACGTGATGAGCAAGTCGGCGGGCATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................T--------------GTGTCCATGCCGGTTGAGT.....................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEre2
AGGAGGTCGAGGCCGAGGCGGTGCACCGCGCCTGCGTCCTGGCCCACCAGGTAAGACCACTCCCATGTCA-------------------------------------------------CTAGTCA---G--TGG----------------GGACGGA-----AAAAA---AGAGGA---------------------------------AC-AAGACGGT--GT--------------GTGTCCATGCCGGTGGAGTGC--CA-GT---CA-------------------------CTG------TGCC---GCGC---A--CTGTAATCAT--G-GTCTATTTATTT----ATGTTATTTT--TGATTTTGAT----------T-TCTTATTATTT-----CCATTCTGTATGTATGCA-------CCC---CTGTACATAT--TATGCGGTATGCGGTATGCGGC--ACTCGATATAACCCCAC--AATAAACG----------------------T------------------------------------------------------AATTTAGGCCGATTGCCCCCTGTACGTGGTCCACGTGATGAGCAAGTCGGCGGGTATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGATGAGCAAGTCGGC......1911.0010000010

Generated: 05/18/2015 at 05:47 AM