ID:

dwi_2970

 Coordinate:

scf2_1100000004921:968209-968490 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.1 -17.0 -17.0

Flybase annnotation

exon [dwil_GLEANR_5848:3]; CDS [Dwil\GK22635-cds]; exon [dwil_GLEANR_5848:4]; CDS [Dwil\GK22635-cds]; intron [Dwil\GK22635-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACCAGCATCAATTCCAAAGAGAACGAAGCGCTTGAAAAGGAGGTGCAGGGTATGTTCAATCGTAGCATTTATTCTCTAACCTGCTTTCTGTGTCCCATTTTGCTTATGTCCAGTATTTCTATTGAATCTCTTAATCTTCTTCCCACATGCTGATCATTTAAAAATATTAAATTCATTAACCTCATAGCCGTCTGAAGAATCTCCCACTAATATCTCTTCTCTCATTTGGTTGGGTAAGACTAACTTATTAACCTCACGATAAATCATTGCTTCAATTCGTTTTGCCGTGGAAAGAAAATCCATTTATATGCATCTCAATCTATGTTTGCAGTTGGCCGTCTGTCATCCAGGCGCCTCAGTCAAAAGTTGTGCCAGCAGCAG
************************************************************************...(((.(((...............(((((....(((..((((((.......(((..........))).......))))))..)))...)))))...................((((((..(((((((.................)))).)))..))))))))).)))............................****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V119
head
..................AGAGAACGAAGCGCTTGAAAA....................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
................................................................AGCATTTGTTCTCTAACCTGC......................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0
............................................................................................................GTCCAGTATTTCTGTTGAATC............................................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0
.....................GAACGAAGCGCTTGAAAAGGGGGTGCAG............................................................................................................................................................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0
........................................................................TTCTCTAACCTGCTTTCTGTG................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0
........................CGAGGCGCTTGAAGGGGAGGT................................................................................................................................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0
............................................................................................................................................................................................................................................................................................................................................TTGGCCGTCTGTCGTCCGGGC............................. 21 2 1 1.00 1 0 0 1
.......................................................................................................................................................................................................................................................ATTAACCTCACGATAAATCAT.................................................................................................................. 21 0 1 1.00 1 1 0 0
...................GAGAACGAAGCGGATGAAAAC...................................................................................................................................................................................................................................................................................................................................................... 21 3 12 0.08 1 0 1 0

Anti-sense strand reads

CTGGTCGTAGTTAAGGTTTCTCTTGCTTCGCGAACTTTTCCTCCACGTCCCATACAAGTTAGCATCGTAAATAAGAGATTGGACGAAAGACACAGGGTAAAACGAATACAGGTCATAAAGATAACTTAGAGAATTAGAAGAAGGGTGTACGACTAGTAAATTTTTATAATTTAAGTAATTGGAGTATCGGCAGACTTCTTAGAGGGTGATTATAGAGAAGAGAGTAAACCAACCCATTCTGATTGAATAATTGGAGTGCTATTTAGTAACGAAGTTAAGCAAAACGGCACCTTTCTTTTAGGTAAATATACGTAGAGTTAGATACAAACGTCAACCGGCAGACAGTAGGTCCGCGGAGTCAGTTTTCAACACGGTCGTCGTC
******************************************************************************************************************...(((.(((...............(((((....(((..((((((.......(((..........))).......))))))..)))...)))))...................((((((..(((((((.................)))).)))..))))))))).)))............................************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
 V119
head
 M020
head
.......................................CCTCCACGTCCCATACAAGTT.................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.............................................CGTCCCATACAAGTTAGCATC............................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................AGAGAATTAGAAGAAGGGTGT.......................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
......................................................................................AAGACACGGGGTAAAACGAAT................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................AGTGCTATTTAGTAACGAAGT........................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................ATATACGTAGAGTTAGATACAAA...................................................... 23 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................GTACGACTAGTAAATTTTTAT....................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................CAGACAGTAGGTCAGCGGAGT....................... 21 1 1 1.00 1 0 0 0 1 0
.............................................................................................................................................................................................................................................TCTGATTGAATAATTGGAGTGCTAT........................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................................GGTGTACGACTAGTAAATTTTTA........................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................................................................CGACAGTAGGTCCGCGTA......................... 18 2 3 0.67 2 2 0 0 0 0
..........................................................................................................................................AGAAGGGAGCACGACGAGTAAA.............................................................................................................................................................................................................................. 22 3 2 0.50 1 1 0 0 0 0
.................................................................................................................................................GGTACGACTAGTAAATTT........................................................................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................CACGGCACCTCTCTTATAGGT............................................................................... 21 3 11 0.18 2 2 0 0 0 0
.....................................................................................................................................................................................................CTTCGAGGGTGAATAGAGAG..................................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................CCGCGGAGTGAGCTTTGA.............. 18 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004921:968159-968540 + dwi_2970 GACCAGCATCAATTCCAAAGAGAACGAAGCGCTTGAAAA-GGAGGTGCAGGGTATGTTCAAT----CG-TAGCA--------------------------TTTATTCTCTAACCTG-------------------------------------------------------------------------------------------------------CT----TTC---------------------------------------------------------------TGTGTCCCATTTTGCTTATGTCCAGTATT-T--CT----ATTGAA-TCTCTTAATCTTCTTCCCACATGCTGATCATTTAAA------A-------ATATT--------AA--ATTCATTAA-----------------------------------CCTCATAGCCGTCTGA-AGA-ATCTCCCACT---AATATCTCTTCTCT-------------CAT-------T-TGGTTGGGTAAGACTA-----------------------------------------------------------------ACTTATTAACCTCACGATAAATCATTGCTTC-------------------A----------------ATTCGTTTTGCC--GT--GGAAAGAA-AATCCATTTATATG-------CATCTCAATCTATGTTTGCAGTTGGCCGTCTGTCATCCAGGCGCCTCAGTCAAAAGTTGTGCCAGCAGCAG
droVir3 scaffold_12855:3394652-3395036 - dvi_3712 GATAAGCGTCAATTCCAAGGAGAACGAAGAGCTGGAAAA-GCATGAAAAAGGTAGCTAACACT--CCA-TAGG-------------------------CAGATAAACTCTTAGCTGGTGGAACT---------------------AC------------------------------------------------------------------------CAAACTTCAT-------CTC-CA-------------------------TATATAT------ATG-------------TATAT---CTATATATCC------ATCTGTACATA----C-TGCCTTTATTTTCTTTTCACATGCCCTCCGCACGCATAC-----------CCT--------ATAT--ATCCATAAA----ACGCACA--------------T-----AG---------TTT-----------------CTCT------------AAAG--------------TGT-------TAAAACTGGGTAAGCCT------CCAGCGTATCTATCACAGCCCATTTCT----------------------------TGCT----------------TT---------------------------------A--TCTGTATTTTTT-------CTTAA-TGTGCTTTTATCTATTAT---TTATAAATA-------TAT------ATATATTCACAGGCG---ATTTGTCCGCTAGAAGGCTCAGCCAGAAGCTCTGCCAGCAGCAA
droMoj3 scaffold_6540:9796591-9796998 + GATTAGCGTCAATTCCAAGGAAAATGAAGAACACGAAAAAGGTAAATTAAGATAGAGCCTATA--TTC-TTGGA--------------------------------------AGATACTAATCC---------------------AT------------------------------------------------------------------------CATACTTCA----ATTACTTACA-------------------------TATACATATATAATTATATATC--TATA-TACAT---ATACATATAT------ATCTGTACAT--A-TC-TGCCTCTGTTTTCTATTCACATGCCTTCCACACGCATATA--A-------ACTCT--------AA--ATCCATAAA----TCGCACATTATGTAA------T-----------------TT-----------------CTCT------------AGAG--------------CTC-------TAAAACTGGGTAAGATG------CCAGAATATCTAACACATTTCGATTGT-----------------------------------------------AGTCCTAAAACCTTTACCTTAAATGGGACTCAAATCATATATGT---------------------------------CTAAT---GTATATATG-------TAT------CTTAATTCACAGATG---ATTTGTCGGGCAGACGTCTCAGCCAGAAGCTGTGCCAGCAGCAG
droGri2 scaffold_14906:6075044-6075454 - GATCAGCGTCAATTCCAAAGAGAACGAAGAGCTGGAGAA-GCATGAAAAAGGTAATTACATTTCTGCC-ACACAAAA-ATGTAGCTGATTTATCATCGCTAATGCTTTA------TGCTGGTCC---------------------AC------------------------------------------------------------------------C------------------------TTCACATCAGAGTTGTTCTTTCAAA--------------------------------------------------------TACATA----CAAGACTTTATCTTCTTTCCACATGCTTTCCGCTTGCATTACA--TGCAAATCCT--------ATAA--ATCCATAAG---CTCGCACT------TCCATAACT---------------AGTT-----------------CTTT------------AAAG--------------CGC-------T-AGCCTGGGTAAGCTTA------CCACATATCTAGCTC----CATCTCCAGCTGTCCATTAATATATTTTTTGTATTGTGTGAATTGTTTACTTTTT---------------------------------------------------------------CATTAATT----------------------TTTTTATCAT------ATCACTTTGCAGACG---TTCTGACCACGAGGCGTCTTGCCCAGAAGCTCTGCCAGCAGCAA
dp5 2:8321393-8321843 - CGGCAGCATCAATTCCAAGGAGAACGAAGCCATCGAGAA-GCAGGAGTCTGGTGCGTATT-TA--TCA-TAGA-------------------------CTAATGCTCCTTCGAGTAGCAAAACC---------------------TC------------------------------------------------------------------------CTCTCATCCT-------CTCTCA-------------------------TCGACAT---------------TTTGTG-------------------------ATCTCTAC----C-TC-TGCCTCTGCTTTCTTTCCACATGCCGATCATGCACATTTCTTT-------GCTCAAAAATT-----A-----TTATGTGTA----CAAGCAGTTG------TAGCACTGCTCCCCGAGGCCGTCTAA-AGT---------CAAGACCTATCAAAATAAA-------------CAATATTTCAT-GTGGTGGGTAAGCACTTCTCTCTCGCATGT------------------------CTTTCG--ATCTGCTCTGGGGTGGCCGAACCGTTTGCCTTCCGTCTCCAAATTGCTTCCGAGAATATCACTCAATTAAC----------------------TTG-CGTGCTTT----------------------TTTT--------------TATCCAACAGACGAAGGAGTGTCCGCCAAGCGACTCAGCCAGAAGCTCTGCCAGCAGCAG
droPer2 scaffold_0:2156483-2156933 - CGGCAGCATCAATTCCAAGGAGAACGAAGCAATAGAGAA-GCAGGAGTCTGGTGCGTACT-TA--TCA-TAGA-------------------------TTAATGCTCCTTCGAGTAGCAAAACC---------------------TC------------------------------------------------------------------------CTCTCATCCT-------CTCTCA-------------------------TCCACAT---------------TTTGTG-------------------------ATCTCTAC----C-TC-TGCCTCTGCTTTCTTTCCACATGCCGATCATGCACATTTTATT-------GCTCAAAAATT-----A-----TTATGTGTA----CAAGCAGTTG------TAGCACTGCTCCCCGAGGCCGTCTAA-AGT---------CAAGACCTATCAAAATAAA-------------CAATATTTCAT-GTGGTGGGTAAGCACTTCTCTCTCGCATGT------------------------CTTTCG--ATCTGCTCTGGGGTGGCCGAACCGTTTGCCTTCCGTCTCCAAATTGCTTCCGAGAATATCACCCAATTAAT----------------------TTG-CGTGCTTT----------------------TGTT--------------TATCCAACAGACGAAGGAGTGTCCGCCAAGCGACTCAGCCAGAAGCTCTGCCAGCAGCAG
droAna3 scaffold_13340:21902169-21902689 + GGCAAGCATTAATTCCAAGGAGAACGAGGCTCTCGAGAA-GCAGGAAAATGGTGCGTATAGTA--GCCGATG-AGGGTATCTAGCTA------------------------------CGAAATAAGGAACCACTTATTGTAACCCTTTTTCGATGGAACGAATTTTGAAATTAAGATTTCCCAGATCATCGCCTATTTGTATAATCTCAAAAATCGTTCCA----TTCTGTGACTA---ACATATG--------------------------------------------------TACATCATGCTCATCCCCATTATTAT--CT----ATA--T-CGCCTCTATTTTCTCTCCACATGCCGGTCATGCACATTTTT---GTAAAATTT--------ATATAA--T---TATATGTATGCACA------TA------T---------------AGCTGTGTGA-AGCCGCCTCCCTCTAGTCCT--CAAAATCAAATTCTATTGGGTAAAT-------T-ATGCTGGGTAAGCGCTTC----CCGCAAAT--AT--------------------CTTC----------------------------------------------------------AATGGTCTTCGCTTCATATCTGTGTTTACG-------CTTCGAA--GCTACTGAAGATTAA---TAATAAGTTTGTT--------------TATTCTGCAGACA---CCATGTCCGCTAGACGACTCAGCCAGAAGCTGTGCCAGCAGCAG
droBip1 scf7180000396583:303133-303564 - GGCAAGCATTAATTCCAAGGAGAACGAGGCTCTCGAGAA-GCAGGAAAATGGTGCGTATAGTA--GCT-ATGCAGAGTATGTAGCTG------------------------------CGAAACCAAGAATCACTCTTTGTAACCCCT------------------------------------------------------------------------CA----CTCTTTGATTA---ATC--TA--------------------------------------------------AACATCATGCTCATCCCCATTATTAT--CT----A----C-CGCCTCTAT-TTCTCCCCACATGCCGGTCATGCCCATTATT-AACTAAA--TT--------ATGTATTTACAAAAA---CACACACA------TATGTATGT---------------AGCTGTGTGATAGG-ACC---CTCTAGTCCTATCAAAATCAA-------------AAT-------T-ATGCTGGGTAAGCGCTTC----CCGCAAGT------------------------CTTC----------------------------------------------------------AACT-CCTCCGCTTCATAATTGT-----CGAGCCCTTCCTCGAA--GT--CGAAAGATTAA------TGTGTTTATT--------------TACTCTGCAGTCA---CCATGTCCCGCAGACGACTCAGCCAGAAGCTGTGCCAGCAGCAG
droKik1 scf7180000302706:1727826-1727881 + GGCGAGCGTCAATTCCAAGGAGAACGAGGCTCTCGAGAA-GCAGGAGCGCGGTACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453826:167820-167873 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGATG---CCCTGTCCGCCAGGAGACTCAGCAAAAAATTCTGCCAGCAACAG
droEle1 scf7180000491280:4264044-4264099 - CGCCAGTATAAACTCCAAGGAGAACGAGGCTTTGGAGAA-ACAGGAGCATGGTGCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779538:511939-512008 - CGCCAGTATAAACTCCAAGGAAAACGAGGCTTTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302075:5339593-5339661 + CGCCAGCATAAACTCCAAGGAGAACGAGGCTTTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415310:359492-359560 + CGCCAGTATAAACTCCAAGGAGAACGAGGCTTTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409787:1838876-1838940 - AACTTTTGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGACG---CCCTGTCCGCCAGGCGACTTAGCAAGAAGCTCTGCCAGCAGCAG
dm3 chr3R:23767806-23767898 + CGCCAGCATAAACTCGAAGGAGAACGAGGCACTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TTGCT-------------------------AAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCATTTGGTGTAGCAT---TT-------------------------------------------------------------------------------------
droSim2 3r:23169607-23169673 + CGCCAGCATAAACTCGAAGGAGAACGAGGCATTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_22:393100-393166 + CGCCAGCATAAACTCGAAGGAGAACGAGGCATTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3R:22729793-22729859 - CGCCAGCATAAACTCGAAGGAGAACGAGGCTTTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4820:4274768-4274834 - CGCCAGCATAAACTCCAAGGAGAACGAGGCATTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GACCAGCATCAATTCCAAAGAGAACGAAGCGCTTGAAAA-GGAGGTGCAGGGTATGTTCAAT----CG-TAGCA--------------------------TTTATTCTCTAACCTG-------------------------------------------------------------------------------------------------------CT----TTC---------------------------------------------------------------TGTGTCCCATTTTGCTTATGTCCAGTATT-T--CT----ATTGAA-TCTCTTAATCTTCTTCCCACATGCTGATCATTTAAA------A-------ATATT--------AA--ATTCATTAA-----------------------------------CCTCATAGCCGTCTGA-AGA-ATCTCCCACT---AATATCTCTTCTCT-------------CAT-------T-TGGTTGGGTAAGACTA-----------------------------------------------------------------ACTTATTAACCTCACGATAAATCATTGCTTC-------------------A----------------ATTCGTTTTGCC--GT--GGAAAGAA-AATCCATTTATATG-------CATCTCAATCTATGTTTGCAGTTGGCCGTCTGTCATCCAGGCGCCTCAGTCAAAAGTTGTGCCAGCAGCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................AGAGAACGAAGCGCTTGAAAA-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
........................................................................................................TTCTCTAACCTG-------------------------------------------------------------------------------------------------------CT----TTC---------------------------------------------------------------TGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAACCTCACGATAAATCAT.................................................................................................................................................................2111.00101000
droVir3
GATAAGCGTCAATTCCAAGGAGAACGAAGAGCTGGAAAA-GCATGAAAAAGGTAGCTAACACT--CCA-TAGG-------------------------CAGATAAACTCTTAGCTGGTGGAACT---------------------AC------------------------------------------------------------------------CAAACTTCAT-------CTC-CA-------------------------TATATAT------ATG-------------TATAT---CTATATATCC------ATCTGTACATA----C-TGCCTTTATTTTCTTTTCACATGCCCTCCGCACGCATAC-----------CCT--------ATAT--ATCCATAAA----ACGCACA--------------T-----AG---------TTT-----------------CTCT------------AAAG--------------TGT-------TAAAACTGGGTAAGCCT------CCAGCGTATCTATCACAGCCCATTTCT----------------------------TGCT----------------TT---------------------------------A--TCTGTATTTTTT-------CTTAA-TGTGCTTTTATCTATTAT---TTATAAATA-------TAT------ATATATTCACAGGCG---ATTTGTCCGCTAGAAGGCTCAGCCAGAAGCTCTGCCAGCAGCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCT----------------------------TGCT----------------TT---------------------------------A--TCTGTATTTT...........................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
............................................................ACT--CCA-TAGG-------------------------CAGATAAACTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---ATTTGTCCGCTAGAAGGCTCAGC.....................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................T---CTATATATCC------ATCTGTAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
.........CAATTCCAAGGAGAACGAAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
.ATAAGCGTCAATTCCAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..............CCAAGGAGAACGAAGAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACA--------------T-----AG---------TTT-----------------CTCT------------AAAG--------------TGT-------.............................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
droMoj3
GATTAGCGTCAATTCCAAGGAAAATGAAGAACACGAAAAAGGTAAATTAAGATAGAGCCTATA--TTC-TTGGA--------------------------------------AGATACTAATCC---------------------AT------------------------------------------------------------------------CATACTTCA----ATTACTTACA-------------------------TATACATATATAATTATATATC--TATA-TACAT---ATACATATAT------ATCTGTACAT--A-TC-TGCCTCTGTTTTCTATTCACATGCCTTCCACACGCATATA--A-------ACTCT--------AA--ATCCATAAA----TCGCACATTATGTAA------T-----------------TT-----------------CTCT------------AGAG--------------CTC-------TAAAACTGGGTAAGATG------CCAGAATATCTAACACATTTCGATTGT-----------------------------------------------AGTCCTAAAACCTTTACCTTAAATGGGACTCAAATCATATATGT---------------------------------CTAAT---GTATATATG-------TAT------CTTAATTCACAGATG---ATTTGTCGGGCAGACGTCTCAGCCAGAAGCTGTGCCAGCAGCAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCTTTACCTTAAATA...................................................................................................................................................1840.251000100
droGri2
GATCAGCGTCAATTCCAAAGAGAACGAAGAGCTGGAGAA-GCATGAAAAAGGTAATTACATTTCTGCC-ACACAAAA-ATGTAGCTGATTTATCATCGCTAATGCTTTA------TGCTGGTCC---------------------AC------------------------------------------------------------------------C------------------------TTCACATCAGAGTTGTTCTTTCAAA--------------------------------------------------------TACATA----CAAGACTTTATCTTCTTTCCACATGCTTTCCGCTTGCATTACA--TGCAAATCCT--------ATAA--ATCCATAAG---CTCGCACT------TCCATAACT---------------AGTT-----------------CTTT------------AAAG--------------CGC-------T-AGCCTGGGTAAGCTTA------CCACATATCTAGCTC----CATCTCCAGCTGTCCATTAATATATTTTTTGTATTGTGTGAATTGTTTACTTTTT---------------------------------------------------------------CATTAATT----------------------TTTTTATCAT------ATCACTTTGCAGACG---TTCTGACCACGAGGCGTCTTGCCCAGAAGCTCTGCCAGCAGCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................ACGAAGAGCTGGAGAA-GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
dp5
CGGCAGCATCAATTCCAAGGAGAACGAAGCCATCGAGAA-GCAGGAGTCTGGTGCGTATT-TA--TCA-TAGA-------------------------CTAATGCTCCTTCGAGTAGCAAAACC---------------------TC------------------------------------------------------------------------CTCTCATCCT-------CTCTCA-------------------------TCGACAT---------------TTTGTG-------------------------ATCTCTAC----C-TC-TGCCTCTGCTTTCTTTCCACATGCCGATCATGCACATTTCTTT-------GCTCAAAAATT-----A-----TTATGTGTA----CAAGCAGTTG------TAGCACTGCTCCCCGAGGCCGTCTAA-AGT---------CAAGACCTATCAAAATAAA-------------CAATATTTCAT-GTGGTGGGTAAGCACTTCTCTCTCGCATGT------------------------CTTTCG--ATCTGCTCTGGGGTGGCCGAACCGTTTGCCTTCCGTCTCCAAATTGCTTCCGAGAATATCACTCAATTAAC----------------------TTG-CGTGCTTT----------------------TTTT--------------TATCCAACAGACGAAGGAGTGTCCGCCAAGCGACTCAGCCAGAAGCTCTGCCAGCAGCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............CCAAGGAGAACGAAGCCATCGAGAA-GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
....................AGAACGAAGCCATCGAGAA-GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
CGGCAGCATCAATTCCAAGGAGAACGAAGCAATAGAGAA-GCAGGAGTCTGGTGCGTACT-TA--TCA-TAGA-------------------------TTAATGCTCCTTCGAGTAGCAAAACC---------------------TC------------------------------------------------------------------------CTCTCATCCT-------CTCTCA-------------------------TCCACAT---------------TTTGTG-------------------------ATCTCTAC----C-TC-TGCCTCTGCTTTCTTTCCACATGCCGATCATGCACATTTTATT-------GCTCAAAAATT-----A-----TTATGTGTA----CAAGCAGTTG------TAGCACTGCTCCCCGAGGCCGTCTAA-AGT---------CAAGACCTATCAAAATAAA-------------CAATATTTCAT-GTGGTGGGTAAGCACTTCTCTCTCGCATGT------------------------CTTTCG--ATCTGCTCTGGGGTGGCCGAACCGTTTGCCTTCCGTCTCCAAATTGCTTCCGAGAATATCACCCAATTAAT----------------------TTG-CGTGCTTT----------------------TGTT--------------TATCCAACAGACGAAGGAGTGTCCGCCAAGCGACTCAGCCAGAAGCTCTGCCAGCAGCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................CGAAGCAATAGAGAA-GCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGT------------------------CTTTCG--ATCTGCTCTG...................................................................................................................................................................................................2011.001000001
droAna3
GGCAAGCATTAATTCCAAGGAGAACGAGGCTCTCGAGAA-GCAGGAAAATGGTGCGTATAGTA--GCCGATG-AGGGTATCTAGCTA------------------------------CGAAATAAGGAACCACTTATTGTAACCCTTTTTCGATGGAACGAATTTTGAAATTAAGATTTCCCAGATCATCGCCTATTTGTATAATCTCAAAAATCGTTCCA----TTCTGTGACTA---ACATATG--------------------------------------------------TACATCATGCTCATCCCCATTATTAT--CT----ATA--T-CGCCTCTATTTTCTCTCCACATGCCGGTCATGCACATTTTT---GTAAAATTT--------ATATAA--T---TATATGTATGCACA------TA------T---------------AGCTGTGTGA-AGCCGCCTCCCTCTAGTCCT--CAAAATCAAATTCTATTGGGTAAAT-------T-ATGCTGGGTAAGCGCTTC----CCGCAAAT--AT--------------------CTTC----------------------------------------------------------AATGGTCTTCGCTTCATATCTGTGTTTACG-------CTTCGAA--GCTACTGAAGATTAA---TAATAAGTTTGTT--------------TATTCTGCAGACA---CCATGTCCGCTAGACGACTCAGCCAGAAGCTGTGCCAGCAGCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................GATGGAACGAATTTTGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...................................................GTGCGTATAGTA--GCCGATG-AG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGTTTACG-------CTTCGAA--G........................................................................................................2011.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGCTAGACGACTCAGCCAGAAGC..............2811.001010000
droBip1
GGCAAGCATTAATTCCAAGGAGAACGAGGCTCTCGAGAA-GCAGGAAAATGGTGCGTATAGTA--GCT-ATGCAGAGTATGTAGCTG------------------------------CGAAACCAAGAATCACTCTTTGTAACCCCT------------------------------------------------------------------------CA----CTCTTTGATTA---ATC--TA--------------------------------------------------AACATCATGCTCATCCCCATTATTAT--CT----A----C-CGCCTCTAT-TTCTCCCCACATGCCGGTCATGCCCATTATT-AACTAAA--TT--------ATGTATTTACAAAAA---CACACACA------TATGTATGT---------------AGCTGTGTGATAGG-ACC---CTCTAGTCCTATCAAAATCAA-------------AAT-------T-ATGCTGGGTAAGCGCTTC----CCGCAAGT------------------------CTTC----------------------------------------------------------AACT-CCTCCGCTTCATAATTGT-----CGAGCCCTTCCTCGAA--GT--CGAAAGATTAA------TGTGTTTATT--------------TACTCTGCAGTCA---CCATGTCCCGCAGACGACTCAGCCAGAAGCTGTGCCAGCAGCAGSizeHit CountTotal NormTotal
No Reads
droKik1
GGCGAGCGTCAATTCCAAGGAGAACGAGGCTCTCGAGAA-GCAGGAGCGCGGTACGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGATG---CCCTGTCCGCCAGGAGACTCAGCAAAAAATTCTGCCAGCAACAGSizeHit CountTotal NormTotal
No Reads
droEle1
CGCCAGTATAAACTCCAAGGAGAACGAGGCTTTGGAGAA-ACAGGAGCATGGTGCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CGCCAGTATAAACTCCAAGGAAAACGAGGCTTTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CGCCAGCATAAACTCCAAGGAGAACGAGGCTTTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CGCCAGTATAAACTCCAAGGAGAACGAGGCTTTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AACTTTTGTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGACG---CCCTGTCCGCCAGGCGACTTAGCAAGAAGCTCTGCCAGCAGCAGSizeHit CountTotal NormTotal
No Reads
dm3
CGCCAGCATAAACTCGAAGGAGAACGAGGCACTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TTGCT-------------------------AAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCATTTGGTGTAGCAT---TT-------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......ATAAACTCGAAGGAGAACGAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGGAGAA-GCAGGAGCATGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGAAGGAGAACGAGGCACTGGAGAA-GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GAGAA-GCAGGAGCATGGTGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................ACGAGGCACTGGAGAA-GCAGGAGCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACGAGGCACTGGAGAA-GCAGGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCATAAACTCGAAGGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GAACGAGGCACTGGAGAA-GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................AACGAGGCACTGGAGAA-GCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................GGAGAACGAGGCACTGGAGAA-GCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATAAACTCGAAGGAGAACGAGGCACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCAGCATAAACTCGAAGGAGAACGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................TGGAGAA-GCAGGAGCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................CTGGAGAA-GCAGGAGCATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................CGAGGCACTGGAGAA-GCAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGGCACTGGAGAA-GCAGGAGCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GTGCGTACTGTA--TCA-TTGCT-------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGAACGAGGCACTGGAGAA-GCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AACGAGGCACTGGAGAA-GCAGGAGCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACGAGGCACTGGAGAA-GCAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...............GAAGGAGAACGAGGCACTGGAGAA-GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AACGAGGCACTGGAGAA-GCAGGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AGAA-GCAGGAGCATGGTGCGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................A-GCAGGAGCATGGTGCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................GAGGCACTGGAGAA-GCAGGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................GAGGCACTGGAGAA-GCAGGAGCATGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTCGAAGGAGAACGAGGCACTGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........AACTCGAAGGAGAACGAGGCACTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................AACGAGGCACTGGAGAA-TT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CGCCAGCATAAACTCGAAGGAGAACGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................TGGAGAA-GCAGGAGCATGGTGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.GCCAGCATAAACTCGAAGGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........AAACTCGAAGGAGAACGAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGGAGAA-GCAGGAGCATGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
droSim2
CGCCAGCATAAACTCGAAGGAGAACGAGGCATTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................A-GCAGGAGCATGGTGCGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
CGCCAGCATAAACTCGAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
.....GCATAAACTCGAAGGAGAACGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
............................................GAGCATGGTGCGTACTGTA--TC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...............................TTGGAGAA-GCAGGAGCATGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
droSec2
CGCCAGCATAAACTCGAAGGAGAACGAGGCATTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CGCCAGCATAAACTCGAAGGAGAACGAGGCTTTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................ACGAGGCTTTGGAGAA-GCAGGAGCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
....................AGAACGAGGCTTTGGAGAA-GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
droEre2
CGCCAGCATAAACTCCAAGGAGAACGAGGCATTGGAGAA-GCAGGAGCATGGTGCGTACTGTA--TCA-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......ATAAACTCCAAGGAGAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
......................AACGAGGCATTGGAGAA-GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.................AGGAGAACGAGGCATTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..........AACTCCAAGGAGAACGAGGCATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
....AGCATAAACTCCAAGGAGAACGAGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010

Generated: 05/18/2015 at 05:45 AM