ID:

dwi_296

 Coordinate:

scf2_1100000003515:21338-21523 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.0 -11.9

Flybase annnotation

exon [dwil_GLEANR_18676:5]; CDS [Dwil\GK18326-cds]; exon [dwil_GLEANR_18676:6]; CDS [Dwil\GK18326-cds]; intron [Dwil\GK18326-in]

No Repeatable elements found

mature
  1. scf2_1100000002751:1882-1903 -
  2. dwi_296  scf2_1100000003515:21456-21477 +
  3. scf2_1100000004542:154393-154414 -
star
  1. scf2_1100000002751:1950-1973 -
  2. dwi_296  scf2_1100000003515:21386-21409 +
  3. scf2_1100000004542:154461-154484 -

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCGCGCACGAGGCCACTGATTAAAGGTCTTTCAAGGGGGACCACTTGTTGGTGGGTGCGCCTGCCCAACGTCCCCCTCCCTTCTAAAGAGGGGTTCTCCGCGCCGATGCTAGGCAAGAATTGTCTAAAACCATTGTATCTTAGTTTTAATCATAGCATTTTTGTAAACCGCACTCATAGGGCCCCGTTAGTACACTCAGAAGGCAGGGTAGTTTTAACGCACTTTATATTTCACAGTATGTCACAGCAAGGAGAAGACGATGGCGATCGCGCGGCAGATATAGCCC
**************************************************************************************************((.((((((((...((((((((((..((((((............))))))..))....)))))))).....))).))....)))..))....************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCA...................................... 23 0 4 2.00 8 5 3 0 0
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCAA..................................... 24 0 4 1.00 4 4 0 0 0
........................................................................................................................................................................CGCACTCATAGGGCCCCGTTAG................................................................................................ 22 0 3 1.00 3 3 0 0 0
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGC....................................... 22 0 8 0.75 6 6 0 0 0
....................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAGGA.................................. 24 0 4 0.75 3 2 1 0 0
....................................................................................................................................................................................................................................................................TGGCGATCGCGCGGCAGATATAGC.. 24 0 3 0.67 2 1 1 0 0
..............................................................................................................................................................................................................................................................AGACGATGGCGATCGCGCGGCAGAT....... 25 0 2 0.50 1 0 1 0 0
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCAAGGA.................................. 27 0 4 0.50 2 0 2 0 0
..............................................................................................................................................................................................................................................TGTCACAGCAAGGAGAAGACGATGGCGA.................... 28 0 2 0.50 1 1 0 0 0
............................................................................................................................................................................................................................................TATGTCACAGCAAGGAGAAGACGATGGC...................... 28 0 2 0.50 1 1 0 0 0
......................................................................................................................................................................................................................................TCACAGTATGTCACAGCAAG.................................... 20 0 4 0.50 2 2 0 0 0
....................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAG.................................... 22 0 4 0.50 2 0 2 0 0
.....................................................................................AAGAGGGGTTCTTCGCGCCGATGC................................................................................................................................................................................. 24 1 3 0.33 1 1 0 0 0
............................................................................................................................................................ATTTTTGTAAACCGCACTCATAGGGC........................................................................................................ 26 0 3 0.33 1 1 0 0 0
............................................................................................................................................................ATTTTTGTAAACCGCACTCATAGGG......................................................................................................... 25 0 3 0.33 1 1 0 0 0
........................................................................................................................................................................CGCACTCATAGGGCCCCGTTAGTACACT.......................................................................................... 28 0 3 0.33 1 1 0 0 0
..................................................................................................CGCGCCGATGCTAGGCAAGAATTG.................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0
........................................................................................................................................................................CGCACTCATAGGGCCCCGTTAGTAC............................................................................................. 25 0 3 0.33 1 1 0 0 0
.........................................................................................................................................................................GCACTCATAGGGCCCCGTTAGTACACT.......................................................................................... 27 0 3 0.33 1 0 1 0 0
......................................................................................................................................................................................................................................TCACAGTATGTCACAGCAAGGAGAAGA............................. 27 0 3 0.33 1 0 1 0 0
........................................................................................................................................................................................................................................ACAGTATGTCACAGCAAGGAGAAGACG........................... 27 0 3 0.33 1 0 1 0 0
......................................................................................................................................................................ACCGCACTCATAGGGCCCCGTTAGTA.............................................................................................. 26 0 3 0.33 1 1 0 0 0
......................................................................................................................................................................ACCGCACTCATAGGGCCCCGTTAGTACAC........................................................................................... 29 0 3 0.33 1 1 0 0 0
......................................................................................................................................................................ACCGCACTCATAGGGCCCCGTTAG................................................................................................ 24 0 3 0.33 1 1 0 0 0
........................................................................................................................................................................CGCACTCATAGGGCCCCGTTAGT............................................................................................... 23 0 3 0.33 1 1 0 0 0
..........................................................................................................................................................................CGCTCATAGGGCCCCGTTAGTACAC........................................................................................... 25 1 3 0.33 1 1 0 0 0
...................................................................................................................................................AATCATAGCATTTTTGTAAACCGC................................................................................................................... 24 0 4 0.25 1 1 0 0 0
.....................................................................................................................................................................................................................................TTCACAGTATGTCACAGCAAGG................................... 22 0 4 0.25 1 1 0 0 0
........................................................................................................................TGTCTAAAACCATTGTATCTTAGTTT............................................................................................................................................ 26 0 4 0.25 1 1 0 0 0
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCAAG.................................... 25 0 4 0.25 1 1 0 0 0
..................................................................................................................................................................................................................................TATTTCACAGTATGTCACAGCA...................................... 22 0 4 0.25 1 1 0 0 0
....................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAGGAG................................. 25 0 4 0.25 1 0 1 0 0
.....................................................................................................................................................................................................................................TTCACAGTATGTCACAGCAAGGAGAA............................... 26 0 4 0.25 1 0 1 0 0
....................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAGGAGAA............................... 27 0 4 0.25 1 1 0 0 0
....................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAGGAGA................................ 26 0 4 0.25 1 0 1 0 0
...........................................................................................................................................TTAGTTTTAATCATAGCATTTTTG........................................................................................................................... 24 0 4 0.25 1 1 0 0 0
................................................................................................................................................................................................................................TATATTTCACAGTATGTCACAG........................................ 22 0 9 0.22 2 2 0 0 0
......................................................................................................................................................................ACCGCACTCATAGGGCCCCGTT.................................................................................................. 22 0 5 0.20 1 1 0 0 0
...............................................................................................................................................................TTTGTAAACCGCACTCATAGGGCCCCG.................................................................................................... 27 0 5 0.20 1 1 0 0 0
................................................................................................................................................................TTGTAAACCGCACTCATAGGGCCC...................................................................................................... 24 0 5 0.20 1 1 0 0 0
.....................................................................................................................................................................AACCGCACTCATAGGGCCCCGT................................................................................................... 22 0 5 0.20 1 1 0 0 0
......................................................................................................................................................................ACCGCACTCATAGGGCCCCGTTA................................................................................................. 23 0 5 0.20 1 1 0 0 0
.......................................................TGCGCCTGCCCAACGTCCCCCTCCC.............................................................................................................................................................................................................. 25 0 14 0.14 2 2 0 0 0
.......................................................TGCGCCTGCCCAACGTCCCCCTCC............................................................................................................................................................................................................... 24 0 14 0.14 2 2 0 0 0
.........................................................................................................................................................................................................................................CAGTATGTCACAGCAAGGAGAAG.............................. 23 0 16 0.13 2 1 0 1 0
..................................................................................................................................................................................................................................TATTTCACAGTATGTCACAGC....................................... 21 0 8 0.13 1 1 0 0 0
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAG........................................ 21 0 9 0.11 1 1 0 0 0
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACA......................................... 20 0 9 0.11 1 0 1 0 0
..............................................................................................................................................................TTTTGTAAACCGCACTCATAGG.......................................................................................................... 22 0 20 0.10 2 2 0 0 0
....................................................................................................................................TTGTATCTTAGTTTTAATCATAGC.................................................................................................................................. 24 0 14 0.07 1 1 0 0 0
.......................................................TGCGCCTGCCCAACGTCCCCCTCCCT............................................................................................................................................................................................................. 26 0 14 0.07 1 1 0 0 0
...............................................................................................................................AACCATTGTATCTTAGTTTTAATCATAGC.................................................................................................................................. 29 0 14 0.07 1 1 0 0 0
.......................................................TGCGCCTGCCCAACGTCCCCCTCCCTTC........................................................................................................................................................................................................... 28 0 14 0.07 1 1 0 0 0
...............................................................................................................................AACCATTGTATCTTAGTTTTAATCAT..................................................................................................................................... 26 0 16 0.06 1 1 0 0 0
..............................................................................CCTTCTAAAGAGGGGTTCTTCGC......................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0
.........................................................................................................................................................................................................................................CAGTATGTCACAGCAAGGAGAAGA............................. 24 0 16 0.06 1 1 0 0 0
.........................................................CGCCTGCCCAACGTCCCCCTCCC.............................................................................................................................................................................................................. 23 0 17 0.06 1 1 0 0 0
.............................................................TGCCCAACGTCCCCCTCCCTT............................................................................................................................................................................................................ 21 0 17 0.06 1 0 1 0 0
.........................................................CGCCTGCCCAACGTCCCCCTC................................................................................................................................................................................................................ 21 0 17 0.06 1 1 0 0 0
............................................................................................................................................................................................................................................TATGTCAAAGCTAGGATAAGA............................. 21 3 19 0.05 1 0 0 1 0
...................................................TGGGTGCGCCTGCCCAACGTCCC.................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0
..................................................................................................................................................................GTAAACCGCACTCATAGGGCC....................................................................................................... 21 0 20 0.05 1 0 1 0 0
................................................................................................................................................................TTGTAAACCGCACTCATAGGGC........................................................................................................ 22 0 20 0.05 1 0 0 0 1
...........................CTTTCAAGGGGGACCACTTGTTGGTG......................................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
..............................TCAAGGGGGACCACTTGTTGG........................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
.......................................ACCACTTGTTGGTGGGTGCGC.................................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0
....................................................................................................................................................................AAACCGCACTCATAGGGC........................................................................................................ 18 0 20 0.05 1 1 0 0 0
..............................TTCAAGGGGACCACTTGTTGGTG......................................................................................................................................................................................................................................... 23 3 20 0.05 1 0 1 0 0

Anti-sense strand reads

CGCGCGTGCTCCGGTGACTAATTTCCAGAAAGTTCCCCCTGGTGAACAACCACCCACGCGGACGGGTTGCAGGGGGAGGGAAGATTTCTCCCCAAGAGGCGCGGCTACGATCCGTTCTTAACAGATTTTGGTAACATAGAATCAAAATTAGTATCGTAAAAACATTTGGCGTGAGTATCCCGGGGCAATCATGTGAGTCTTCCGTCCCATCAAAATTGCGTGAAATATAAAGTGTCATACAGTGTCGTTCCTCTTCTGCTACCGCTAGCGCGCCGTCTATATCGGG
************************************************************************************************((.((((((((...((((((((((..((((((............))))))..))....)))))))).....))).))....)))..))....************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
..................................................................................................................................................................................................................CAAAATTGCGTGAAATATAAAGTGT................................................... 25 0 3 21.33 64 36 27 1 0 0
........................................................................................................................................................ATCGTAAAAACATTTGGCGTGAGTAT............................................................................................................ 26 0 3 16.00 48 1 47 0 0 0
.........................................................................................................................................................TCGTAAAAACATTTGGCGTGAGTAT............................................................................................................ 25 0 3 9.67 29 5 24 0 0 0
...............................................................................................................CCGTTCTTAACAGATTTTGGTAACAT..................................................................................................................................................... 26 0 4 6.75 27 23 4 0 0 0
..........................................................................................................................................................CGTAAAAACATTTGGCGTGAGTAT............................................................................................................ 24 0 3 6.67 20 5 15 0 0 0
........................................................................................................................................................................................................................TGCGTGAAATATAAAGTGTCATACAGT........................................... 27 0 3 6.67 20 2 17 1 0 0
................................................................................................................................................................................ATCCCGGGGCAATCATGTGAGTCTT..................................................................................... 25 0 4 5.75 23 16 7 0 0 0
.......GCTCCGGTGACTAATTTCCAGAAAGT............................................................................................................................................................................................................................................................. 26 0 2 5.50 11 7 4 0 0 0
..................................................................................................................................................................................................................CAAAATTGCGTGAAATATAAAGTGTCAT................................................ 28 0 3 4.67 14 8 6 0 0 0
.....................................................................................TTCTCCCCAAGAAGCGCGGCTACGAT............................................................................................................................................................................... 26 1 3 3.67 11 11 0 0 0 0
..........................................................................................CCCAAGAAGCGCGGCTACGATCCGT........................................................................................................................................................................... 25 1 3 3.33 10 10 0 0 0 0
....................................................................................................GCGGCTACGATCCGTTCTTAACAGAT................................................................................................................................................................ 26 0 3 3.00 9 8 1 0 0 0
.........................................................................................CCCCAAGAAGCGCGGCTACGATCCGT........................................................................................................................................................................... 26 1 3 3.00 9 9 0 0 0 0
...................................................................................................................TCTTAACAGATTTTGGTAACATAGAAT................................................................................................................................................ 27 0 4 3.00 12 2 10 0 0 0
..............................................................................GGAAGATTTCTCCCCAAGAAGCGCGGCT.................................................................................................................................................................................... 28 1 3 2.33 7 7 0 0 0 0
...........................................................................................................................................................GTAAAAACATTTGGCGTGAGTAT............................................................................................................ 23 0 3 2.33 7 1 5 0 0 1
.......................................................................................................................................................................GGCGTGAGTATCCCGGGGCAATCATGT............................................................................................ 27 0 3 2.33 7 7 0 0 0 0
................................................................................................................................................................................ATCCCGGGGCAATCATGTGAGTCT...................................................................................... 24 0 4 2.00 8 6 2 0 0 0
..............................................................................................................................................................................................................................................ACAGTGTCGTTCCTCTTCTGCTACCGC..................... 27 0 2 2.00 4 3 0 0 1 0
..........................................................................................................................................................................................................................................................CTCTTCTGCTACCGCTAGCGCGCCGT.......... 26 0 2 2.00 4 3 1 0 0 0
.........................................................................................CCCCAAGAAGCGCGGCTACGATCCGTTCT........................................................................................................................................................................ 29 1 3 2.00 6 6 0 0 0 0
....................................................................................TTTCTCCCCAAGAAGCGCGGCTACGAT............................................................................................................................................................................... 27 1 3 2.00 6 5 1 0 0 0
.......GCTCCGGTGACTAATTTCCAGAAAGTT............................................................................................................................................................................................................................................................ 27 0 2 2.00 4 2 2 0 0 0
...............................................................................GAAGATTTCTCCCCAAGAAGCGCGGCT.................................................................................................................................................................................... 27 1 3 2.00 6 6 0 0 0 0
..............................................................................................................TCCGTTCTTAACAGATTTTGGTAACAT..................................................................................................................................................... 27 0 4 1.75 7 7 0 0 0 0
......................................................................................................................TAACAGATTTTGGTAACATAGAAT................................................................................................................................................ 24 0 4 1.75 7 1 6 0 0 0
....................................................................................TTTCTCCCCAAGAAGCGCGGCTACGA................................................................................................................................................................................ 26 1 3 1.67 5 5 0 0 0 0
.....................................................................................TTCTCCCCAAGAAGCGCGGCTACGA................................................................................................................................................................................ 25 1 3 1.67 5 5 0 0 0 0
..........................................................................................................................................................................GTGAGTATCCCGGGGCAATCATGT............................................................................................ 24 0 3 1.67 5 2 3 0 0 0
.....................................................................................................................................................................TTGGCGTGAGTATCCCGGGGCAATCAT.............................................................................................. 27 0 3 1.33 4 4 0 0 0 0
........................................................................................TCCCCAAGAAGCGCGGCTACGATCCGT........................................................................................................................................................................... 27 1 3 1.33 4 4 0 0 0 0
..................................................................................................................................................................................................................CAAAATTGCGTGAAATATAAAGTG.................................................... 24 0 3 1.33 4 4 0 0 0 0
....................................................................................................GCGGCTACGATCCGTTCTTAACAGATT............................................................................................................................................................... 27 0 3 1.00 3 2 1 0 0 0
................................................................................................................................................................................................................................................AGTGTCGTTCCTCTTCTGCTACCGCT.................... 26 0 2 1.00 2 1 1 0 0 0
.............................................................................................................................................................................................................CCCATCAAAATTGCGTGAAATATAAAGT..................................................... 28 0 3 1.00 3 2 1 0 0 0
...................................................................................................................................................................................................................................................GTCGTTCCTCTTCTGCTACCGCTAGC................. 26 0 2 1.00 2 2 0 0 0 0
.........TCCGGTGACTAATTTCCAGAAAGTT............................................................................................................................................................................................................................................................ 25 0 2 1.00 2 2 0 0 0 0
.............................................................................GTGTAGATTTCTCCGCAAGAGG........................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................GTCGTTCCTCTTCTGCTACCGCTAGCGC............... 28 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................................................AAAAACATTTGGCGTGAGTAT............................................................................................................ 21 0 3 1.00 3 1 2 0 0 0
.............................................................................................................................................................................................................................................TACAGTGTCGTTCCTCTTCTGCTACCGCT.................... 29 0 2 1.00 2 2 0 0 0 0
.........................................................................................................................................................................................................CCGTCCCATCAAAATTGCGTGAAATAT.......................................................... 27 0 3 1.00 3 2 1 0 0 0
..............................................................................................................................................................................GTATCCCGGGGCAATCATGTGAGTCTT..................................................................................... 27 0 4 1.00 4 1 3 0 0 0
...............................................................................................................................................................................................................................................................CTGCTACCGCTAGCGCGCCGTCTATAT.... 27 0 2 1.00 2 1 1 0 0 0
.................................................................................................................................................................................................................................................GTGTCGTTCCTCTTCTGCTACCGCT.................... 25 0 2 1.00 2 1 1 0 0 0
............................................................................................................................................................................................................................................................CTTCTGCTACCGCTAGCGCGCCGT.......... 24 0 2 1.00 2 1 1 0 0 0
.................................................................GTTGCAGGGGGAGGGAAGATTTCT..................................................................................................................................................................................................... 24 0 16 0.69 11 9 2 0 0 0
.................................................................................................................................................................................................................TCAAAATTGCGTGAAATATAAAGTGT................................................... 26 0 3 0.67 2 2 0 0 0 0
.........................................................................................................................................................................CGTGAGTATCCCGGGGCAATCATGT............................................................................................ 25 0 3 0.67 2 0 2 0 0 0
.......................................................................................................................................................TATCGTAAAAACATTTGGCGTGAGTAT............................................................................................................ 27 0 3 0.67 2 0 2 0 0 0
........................................................................................................................................................................................................................TGCGTGAAATATAAAGTGTCATACAG............................................ 26 0 3 0.67 2 2 0 0 0 0
..........................................................................................................................................................CGTAAAAACATTTGGCGTGAGT.............................................................................................................. 22 0 3 0.67 2 0 2 0 0 0
..........................................................................................................................................................CGTAAAAACATTTGGCGTGAGTATC........................................................................................................... 25 0 3 0.67 2 0 2 0 0 0
.......................................................................................CTCCCCAAGAAGCGCGGCTACGATCCGT........................................................................................................................................................................... 28 1 3 0.67 2 2 0 0 0 0
....................................................................................TTTCTCCCCAAGAAGCGCGGCTACG................................................................................................................................................................................. 25 1 3 0.67 2 1 0 1 0 0
......................................................................................TCTCCCCAAGAAGCGCGGCTACGAT............................................................................................................................................................................... 25 1 3 0.67 2 2 0 0 0 0
..............................................................................................................................TTTGGTAACATAGAATCAAAATTAGTAT.................................................................................................................................... 28 0 15 0.53 8 2 6 0 0 0
.............................................................................................................................................................................................................................GAAATATAAAGTGTCATACAGTGTCGT...................................... 27 0 4 0.50 2 1 1 0 0 0
...............................................................................................................................................................................................................................................CAGAGTCGTTCCTCTTCTGCTACCGCT.................... 27 1 2 0.50 1 0 1 0 0 0
...................................................................................................................................................................................................................................................GTCGTTCCTCTTCTGCTACCGCT.................... 23 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................................................ACAGTGTCGTTCCTCTCCTGCTACCGC..................... 27 1 2 0.50 1 0 1 0 0 0
.......................................................................................................................................................................................................................................................TTCCTCTTCTGCTACCGCTAGCGCCGT............ 27 3 2 0.50 1 1 0 0 0 0
.........................................................................................................................................AGAATCAAAATTAGTATCGTAA............................................................................................................................... 22 0 4 0.50 2 2 0 0 0 0
.............................................................................................................................................................................AGTATCCCGGGGCAATCATG............................................................................................. 20 0 4 0.50 2 2 0 0 0 0
.................................................................................................................................................................................TCCCGGGGCAATCATGTGAGTCT...................................................................................... 23 0 4 0.50 2 2 0 0 0 0
................................................................................AAGATTTCTCCCCAAGAAGCGCGGCT.................................................................................................................................................................................... 26 1 4 0.50 2 2 0 0 0 0
........CTCCGGTGACTAATTTCCAGAAAGTT............................................................................................................................................................................................................................................................ 26 0 2 0.50 1 0 1 0 0 0
..................................................................................................................................................................................................................................................TGTCGTTCCTCTTCTGCTACCGCT.................... 24 0 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................................................................................................................CCTCTTCTGCTACCGCTAGCGCGCCG........... 26 0 2 0.50 1 1 0 0 0 0
...........................................................................AAGGGAAGATTTCTCCCCAAGAAGCGCGGC..................................................................................................................................................................................... 30 2 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................................................................................................................CCTCTTCTGCTACCGCTAGCGCGCC............ 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................CGTTCCTCTTCTGCTACCGCTAGCGCGC............. 28 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................AGAATCAAAATTAGTATCGTAAAAACAT......................................................................................................................... 28 0 4 0.50 2 2 0 0 0 0
..........CCGGTGACTAATTTCCAGAAAGTT............................................................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
.........................................................................TGGAGGGAAGATTTCTCCCCAAGAAGCGC........................................................................................................................................................................................ 29 2 2 0.50 1 0 0 1 0 0
.................................................................................................................................................................................................................................................GTGTCGTTCCTCTTCTGCTACCGCTAGC................. 28 0 2 0.50 1 1 0 0 0 0
.....GTGCTCCGGTGACTAATTTCCAGAAAGT............................................................................................................................................................................................................................................................. 28 0 2 0.50 1 0 1 0 0 0
.............................................................................................................................................................................................................................................TACAGTGTCGTTCCTCTTCTGCTACCGC..................... 28 0 2 0.50 1 1 0 0 0 0
....TATGCTCCGGTGACTAATTTCCAGAAAGT............................................................................................................................................................................................................................................................. 29 2 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................................................TAGTGTCGTTCCTCTTCTGCTACCGC..................... 26 1 2 0.50 1 0 1 0 0 0
...GCGTGCTCCGGTGACTAATTTCCAGA................................................................................................................................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0
..................................................................................................................................................................................................................................................TGTCGTTCCTCTTCTGCTACCGCTAG.................. 26 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................TCTTCTGCTACCGCTAGCGCGCCGTC......... 26 0 2 0.50 1 0 1 0 0 0
..........CCGGTGACTAATTTCCAGAAAGTTCC.......................................................................................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
................................................................................................................CGTTCTTAACAGATTTTGGTAACAT..................................................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0
..............................................................................................................................................................................................................................................AAAGTGTCGTTCCTCTTCTGCTACCGC..................... 27 1 2 0.50 1 0 1 0 0 0
............................................................................................................................................................................................................................................................TATCTGCTACCGCTAGCGCGCCGTCTAT...... 28 2 2 0.50 1 1 0 0 0 0
...GCGTGCTCCGGTGACTAATTTCCA................................................................................................................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................................................................................................TCTGCTACCGCTAGCGCGCCGTCTA....... 25 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................AGAATCAAAATTAGTATCGTAAAAACATT........................................................................................................................ 29 0 4 0.50 2 2 0 0 0 0
.......CCTCCGGTGACTAATTTCCAGAAAGTT............................................................................................................................................................................................................................................................ 27 1 2 0.50 1 0 1 0 0 0
...GCGTGCTCCGGTGACTAATTTCCAGAA................................................................................................................................................................................................................................................................ 27 0 2 0.50 1 0 1 0 0 0
................................................................................................................................................................................................................................................AGTGTCGTTCCTCTTCTGCTACCGC..................... 25 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................................................ACAGTGTCGTTCCTCGTCTGCTACCGC..................... 27 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................CTGCTACCGCTAGCGCGCCGTCTAT...... 25 0 2 0.50 1 0 1 0 0 0
.....................................................................................................................................................................TTGGCGTGAGTATCCCGGGGCAAT................................................................................................. 24 0 5 0.40 2 0 2 0 0 0
.................................................................................AGATTTCTCCCCAAGAAGCGCGGC..................................................................................................................................................................................... 24 1 5 0.40 2 2 0 0 0 0
.................................................................................AGATTTCTCCCCAAGAAGCGCGGCT.................................................................................................................................................................................... 25 1 5 0.40 2 2 0 0 0 0
......................................CTGGTGAACAACCACCCACGCGGACGGGT........................................................................................................................................................................................................................... 29 0 20 0.35 7 0 7 0 0 0
........................................................................................................................................................ATCGTAAAAACATTTGGAGTGAGTAT............................................................................................................ 26 1 3 0.33 1 0 1 0 0 0
............................................................................................................................................................................GAGTATCCCGGGGCAATCATGT............................................................................................ 22 0 3 0.33 1 0 1 0 0 0
........................................................................................................................................................................................................................TGCGTGAAATATAGAGTGTCATACAGT........................................... 27 1 3 0.33 1 0 1 0 0 0
.........................................................................................................................................................TCGTAAAAACATTTGGCGTGAGTA............................................................................................................. 24 0 3 0.33 1 1 0 0 0 0
................................................................................................................................................................................................................................................................TGCTACCGCTAGCGCGCCGTCTAT...... 24 0 3 0.33 1 1 0 0 0 0
...................................................................................................CGCGGCTACGATCCGTTCTTAACAGATT............................................................................................................................................................... 28 0 3 0.33 1 1 0 0 0 0
..............................................................................GGAAGATTTCTCCCCAAGAAGCGCG....................................................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0
.....................................................................................................CGGCTACGATCCGTTCTTAACAGATT............................................................................................................................................................... 26 0 3 0.33 1 0 1 0 0 0
........................................................................................................................................................ACCGTAAAAACATTTGGCGTGAGTAT............................................................................................................ 26 1 3 0.33 1 0 1 0 0 0
........................................................................................................................................................ATCGTAAAAACATTTGGCGTGAGTATC........................................................................................................... 27 0 3 0.33 1 0 1 0 0 0
........................................................................................................................................................ATAGTAAAAACATTTGGCGTGAGTAT............................................................................................................ 26 1 3 0.33 1 0 1 0 0 0
.......................................................................................CTCCCCAAGAAGCGCGGCTACGAT............................................................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0
......................................................................................................GGCTACGATCCGTTCTTAACAGAT................................................................................................................................................................ 24 0 3 0.33 1 0 1 0 0 0
......................................................................................................................................................TTATCGTAAAAACATTTGGCGTGAGT.............................................................................................................. 26 1 3 0.33 1 0 1 0 0 0
..................................................................................GATTTCTCCCCAAGAAGCGCGGCTAC.................................................................................................................................................................................. 26 1 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................................CGGGAGTATCCCGGGGCAATCATGT............................................................................................ 25 1 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................................................................CAAAATTGCTTGAAATATAAAGTGT................................................... 25 1 3 0.33 1 0 1 0 0 0
...................................................................................ATTTCTCCCCAAGAAGCGCGGCTACGAT............................................................................................................................................................................... 28 1 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................CGTAAAAACATTTGGCGTGAGTA............................................................................................................. 23 0 3 0.33 1 1 0 0 0 0
..................................................................................................GCGCGGCTACGATCCGTTCTTAACAGAT................................................................................................................................................................ 28 0 3 0.33 1 0 1 0 0 0
...................................................................................................................................................................................................................AAAATTGCGTGAAATATAAAGTGT................................................... 24 0 3 0.33 1 0 1 0 0 0
........................................................................................................................................................................................................TCCGTCCCATCAAAATTGCGTGAAATAT.......................................................... 28 0 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................................................................CAAAAATGCGTGAAATATAAAGTGT................................................... 25 1 3 0.33 1 1 0 0 0 0
................................................................................................................................................................................................................ATCAAAATTGCGTGAAATATAAAGTGT................................................... 27 0 3 0.33 1 0 1 0 0 0
.....................................................................................................................................................................TTGGCGTGAGTATCCCGGGGCAATC................................................................................................ 25 0 3 0.33 1 1 0 0 0 0
......................................................................................................................................................................................................CTTCCGTCCCATCAAAATTGCGTGAAAT............................................................ 28 0 3 0.33 1 1 0 0 0 0
.....................................................................................TTCTCCCCAAGAAGCGCGGCTACGATGG............................................................................................................................................................................. 28 3 3 0.33 1 1 0 0 0 0
........................................................................................................................................................................................................................TACGTGAAATATAAAGTGTCATACAGT........................................... 27 1 3 0.33 1 0 1 0 0 0
.....................................................................................................................................................................................................................AATTGCGTGAAATATAAAGTGTCAT................................................ 25 0 3 0.33 1 0 1 0 0 0
.........................................................................................................................................................TCGTAAAAACATTTTGCGTGAGTAT............................................................................................................ 25 1 3 0.33 1 0 1 0 0 0
............................................................................................................................................................................GAGTATCCCGGGGCAATCA............................................................................................... 19 0 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................TCGTAAAAACATTTGGCGTGAGTATCC.......................................................................................................... 27 0 3 0.33 1 0 1 0 0 0
................................................................................................................................................................................................................................................................TGCTACCGCTAGCGCGCCGTCTATAT.... 26 0 3 0.33 1 0 1 0 0 0
..............................................................................GGAAGATCTCTCCCCAAGAAGCGCGGCT.................................................................................................................................................................................... 28 2 3 0.33 1 1 0 0 0 0
......................................................................................................................................................TTATCGTAAAAACATTTGGCGTGAGTAT............................................................................................................ 28 1 3 0.33 1 0 1 0 0 0
.........................................................................................................................................................TCGTAAAAACATTTGGCGTGAGTATC........................................................................................................... 26 0 3 0.33 1 0 1 0 0 0
....................................................................................TTTCTCCCCAAGAAGGGCGGCTACGAT............................................................................................................................................................................... 27 2 3 0.33 1 1 0 0 0 0
.................................................................................................................................................................................................................TCAAAATTGCGTGAAATATAAAGTTT................................................... 26 1 3 0.33 1 0 1 0 0 0
....................................................................................ATTCTCCCCAAGAAGCGCGGCTACGAT............................................................................................................................................................................... 27 2 3 0.33 1 1 0 0 0 0
........................................................................................................................................................CTCGTAAAAACATTTGGCGTGAGTAT............................................................................................................ 26 1 3 0.33 1 0 1 0 0 0
..................................................................................................................................................................................................................CAAAATTTCGTTAAATATAAAGTGT................................................... 25 2 3 0.33 1 0 1 0 0 0
...............................................................................................................................................................................................................CATCAAAATTGCGTGAAATATAAAGTGT................................................... 28 0 3 0.33 1 0 1 0 0 0
..........................................................................................................................................................CGTAAAAACATTTGGCATGAGTAT............................................................................................................ 24 1 3 0.33 1 0 1 0 0 0
....................................................................................................................................................................................................................AAATTGCGTGAAATATAAAGTGTCAT................................................ 26 0 3 0.33 1 0 1 0 0 0
.........................................................................................CCCCAAGAAGCGCGGCTACGATC.............................................................................................................................................................................. 23 1 3 0.33 1 1 0 0 0 0
......................................................................................................GGCTACGATCCGTTCTTA...................................................................................................................................................................... 18 0 6 0.33 2 2 0 0 0 0
.............................................................................................................................................................................................................CCCATCAAAATTGCGTGAAATATAAAG...................................................... 27 0 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................................................................................................................CCTCTTCTGCTACCCCTA................... 18 1 3 0.33 1 0 0 0 1 0
................................................................................................................................................................................................................................................................TGCTACCGCTAGCGCGCCGT.......... 20 0 3 0.33 1 0 1 0 0 0
.........................................................................................CCCCAAGAAGCGCGGCTGCGATCCGT........................................................................................................................................................................... 26 2 3 0.33 1 1 0 0 0 0
........................................................................................................................................................................................................................TGCGTGCAATATAAAGTGTCATACAGT........................................... 27 1 3 0.33 1 0 1 0 0 0
..........................................................................................................................................................................................................................CGTGAAATATAAAGTGTCATACAG............................................ 24 0 3 0.33 1 1 0 0 0 0
.....................................................................................................CGGCTAGGATCCGTGCTTGA..................................................................................................................................................................... 20 3 3 0.33 1 0 0 1 0 0
..................................................................................................................................................................................................................CAAAATTGCATGAAATATAAAGT..................................................... 23 1 3 0.33 1 1 0 0 0 0
...............................................................................GAAGATTTCTCCCCAAGAAGCGCGGC..................................................................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................TCGTAAAAACATTTGTCGTGAGTAT............................................................................................................ 25 1 3 0.33 1 0 1 0 0 0
......................................................................................................................................................................AGGCGTGAGTATCCCGGGGCAATCAT.............................................................................................. 26 1 3 0.33 1 0 1 0 0 0
...................................................................TGCAGGGGGAGGGAAGATTTCT..................................................................................................................................................................................................... 22 0 16 0.31 5 4 1 0 0 0
..............................................................................................................................TTTGGTAACATAGAATCAAAATTAGT...................................................................................................................................... 26 0 15 0.27 4 0 4 0 0 0
.................................................................................................................GTTCTTAACAGATTTTGGTAACAT..................................................................................................................................................... 24 0 4 0.25 1 0 1 0 0 0
............................................................................................................................................ATCAAAATTAGTATCGTAAAAACATT........................................................................................................................ 26 0 4 0.25 1 1 0 0 0 0
.......................................................................................................GCTACGATCCGTTCTTAACAGATTTTGG........................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0
..............................................................................................................................................CAAAATTAGTATCGTAAAAACATTTGGC.................................................................................................................... 28 0 4 0.25 1 0 1 0 0 0
..............................................................................................................TCCGTTCTTAACAGAGTTTGGTAACAT..................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0
...................................................................................................................................................................................................................................TAAAGTGTCATACAGTGTCGTTCCT.................................. 25 0 4 0.25 1 1 0 0 0 0
..............................................................................................................................................................................GTATCCCGGGGCAATCATGTGAGTCT...................................................................................... 26 0 4 0.25 1 0 1 0 0 0
................................................................................................................................................................................ATCCCGGGGCAATCATGTGAGTC....................................................................................... 23 0 4 0.25 1 1 0 0 0 0
...............................................................................................................CCGTTCTTAACAGATTTTGGTAA........................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0
...............................................................................................................CCGTTCTCAACAGATTTTGGTAACAT..................................................................................................................................................... 26 1 4 0.25 1 0 1 0 0 0
.............................................................................................................................................................................................................................GAAATATAAAGTGTCATACAGTGT......................................... 24 0 8 0.25 2 2 0 0 0 0
..........................................................................................................ACGATCCGTTCTTAACAGATTTTGGT.......................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
.......................................................................................................GCTACGATCCGTTCTTAACAGATTTTGGT.......................................................................................................................................................... 29 0 4 0.25 1 1 0 0 0 0
..............................................................................................................................................................................ATATCCCGGGGCAATCATGTGAGTCTT..................................................................................... 27 1 4 0.25 1 1 0 0 0 0
........................................................................................................................................AAGAATCAAAATTAGTATCGTAAAAACA.......................................................................................................................... 28 1 4 0.25 1 1 0 0 0 0
...............................................................................................................CCGTTCTTAACAGATTTTGGTAACATAG................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0
..................................................................................................................................................ATTAGTGCCGTAAAAACTTTTG...................................................................................................................... 22 3 4 0.25 1 1 0 0 0 0
................................................................................................................................................................................ATCCCGGGGCAACCATGTGAGTCT...................................................................................... 24 1 4 0.25 1 1 0 0 0 0
..............................................................................................................................................CAAAATTAGTATCGTAAAAACATTTGTC.................................................................................................................... 28 1 4 0.25 1 1 0 0 0 0
...............................................................................................................CCGTTCTTAACAGATTTAGGTAACAT..................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0
................................................................................................................................................................................ATCCCGGGGCAATCATGTGAGT........................................................................................ 22 0 4 0.25 1 1 0 0 0 0
...............................................................................................................CCGTTCTTAACAGACTTTGGTAACAT..................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0
.................................................................................................................................................................................TCCCGGGGCAATCATGTGAGTCTT..................................................................................... 24 0 4 0.25 1 0 1 0 0 0
..................................................................TTGCAGGGGGAGGGAAGATTT....................................................................................................................................................................................................... 21 0 19 0.21 4 4 0 0 0 0
........................................GGTGAACAACCACCCACGCGGACGGGT........................................................................................................................................................................................................................... 27 0 20 0.20 4 0 4 0 0 0
.........................................................................................................................................................................................................................................GTCATACAGTGTCGTTCCTCTTCTGCT.......................... 27 0 16 0.19 3 3 0 0 0 0
..................................................................TTGCAGGGGGAGGGAAGATTTCT..................................................................................................................................................................................................... 23 0 16 0.19 3 3 0 0 0 0
...............................................................................................................................TTGGTAACATAGAATCAAAATTAGT...................................................................................................................................... 25 0 16 0.19 3 1 2 0 0 0
............................................................GACGGGTTGCAGGGGGAGGGAAGAT......................................................................................................................................................................................................... 25 0 16 0.19 3 3 0 0 0 0
.........................................................................................................................................................................................................................................GTCATACAGTGTCGTTCCTCTTCTGC........................... 26 0 16 0.19 3 3 0 0 0 0
..........................................................................................................................AGATTTTGGTAACATAGAATCAAAAT.......................................................................................................................................... 26 0 11 0.18 2 2 0 0 0 0
...........................................................................................................................................................AAAAAAACATTTGGCGTGAGTAT............................................................................................................ 23 2 6 0.17 1 0 1 0 0 0
.........................................................................................TCCCAGGCGGCGCGGCTAC.................................................................................................................................................................................. 19 3 6 0.17 1 1 0 0 0 0
........................................................................................CCCCCAAGAAGCGCGGCTACGATCCGT........................................................................................................................................................................... 27 2 6 0.17 1 1 0 0 0 0
..........................................TGAACAACCACCCACGCGGACGGGT........................................................................................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0
........................................GGTGAACAACCACCCACGCGGACGG............................................................................................................................................................................................................................. 25 0 20 0.15 3 3 0 0 0 0
..........................................................................GGAGGGAAGATTTCTCCCCAAGAAGC.......................................................................................................................................................................................... 26 1 14 0.14 2 2 0 0 0 0
.................................................................................................................................GGTAACATAGAATCAAAATTAGTATCGT................................................................................................................................. 28 0 14 0.14 2 2 0 0 0 0
...........................................................................................................................................................................................................................GTGAAATATAAAGTGTCATACAGTGT......................................... 26 0 7 0.14 1 0 1 0 0 0
................................................................GGTTGCAGGGGGAGGGAAGATTTCT..................................................................................................................................................................................................... 25 0 15 0.13 2 2 0 0 0 0
............................................................................................................................................................................................................................TGAAATATAAAGTGTCAT................................................ 18 0 9 0.11 1 1 0 0 0 0
............................................................................................................................................................................................................................TTAAATATAAAGTGTCATACAGTGT......................................... 25 1 9 0.11 1 0 1 0 0 0
................................................................GGTTGCAGGGGGAGGGAAGATTT....................................................................................................................................................................................................... 23 0 18 0.11 2 2 0 0 0 0
...................................................................TGCAGGGGGAGGGAAGATT........................................................................................................................................................................................................ 19 0 19 0.11 2 1 1 0 0 0
..............................................................................................................................................................AAAACATTTGGCGTGAGTAT............................................................................................................ 20 0 20 0.10 2 0 2 0 0 0
...........................................GAACAACCACCCACGCGGACGGGT........................................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
..........................................TGAACAACCACCCACGCGGACGGGTT.......................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
...........................................GAACAACCACCCACGCGGACGGGTTGC........................................................................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
.........................................GTGAACAACCACCCACGCGGACGGGT........................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
.................................TCCCCCTGGTGAACAACCACCCAC..................................................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
........................................................................GGGGAGGGAAGATTTCTCCCCAAGAAGC.......................................................................................................................................................................................... 28 1 13 0.08 1 1 0 0 0 0
..........................................................................GGAGGGAAGATTTCTCCCCAAGAAGCG......................................................................................................................................................................................... 27 1 14 0.07 1 1 0 0 0 0
.........................................................................................................................................AGAATCAAAATTAGTATCGT................................................................................................................................. 20 0 15 0.07 1 1 0 0 0 0
..............................................................................................................................TTTGGTAACATAGAATCAAAATTAG....................................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0
..........................................................................................................................................................................................................................................TCATACAGTGTCGTTCCTCTTCTGC........................... 25 0 16 0.06 1 1 0 0 0 0
................................................................................................................................TGGTAACATAGAATCAAAATTAGTAT.................................................................................................................................... 26 0 16 0.06 1 0 1 0 0 0
...............................................................................................................................................................................................................................................CAGTGTCGTTCCTCTTCTGCT.......................... 21 0 16 0.06 1 1 0 0 0 0
..................................................................TTGCAGGGGGAGGGAAGATTTCTC.................................................................................................................................................................................................... 24 0 16 0.06 1 1 0 0 0 0
...........................................................GGACGGGTTGCAGGGGGAGGGAAGAT......................................................................................................................................................................................................... 26 0 16 0.06 1 1 0 0 0 0
............................................................GACGGGTTGCAGGGGGAGGGAAGATT........................................................................................................................................................................................................ 26 0 16 0.06 1 1 0 0 0 0
...............................................................................................................................TTGGTAACATAGAATCAAAATTAG....................................................................................................................................... 24 0 16 0.06 1 1 0 0 0 0
.................................................................GTTGCAGGGCGAGGGAAGATTTCT..................................................................................................................................................................................................... 24 1 16 0.06 1 0 1 0 0 0
.................................................................................................................................GGTAACATAGAATCAAAATTAGTAT.................................................................................................................................... 25 0 16 0.06 1 0 1 0 0 0
.........................................................................................................................................................................................................................................GTCATACAGTGTCGTTCCTCTTC.............................. 23 0 16 0.06 1 1 0 0 0 0
............................................................................................................................................................................................................................................ATACAGTGTCGTTCCTCTTCTGCT.......................... 24 0 16 0.06 1 1 0 0 0 0
...............................................................................................................................TTGGTAACATAGAATCAAAATTAGTATC................................................................................................................................... 28 0 16 0.06 1 0 1 0 0 0
....................................................................GCAGGGGGAGGGAAGATTTCT..................................................................................................................................................................................................... 21 0 17 0.06 1 1 0 0 0 0
...................................................................TGCAGGGGGAGGGAAGATTTAT..................................................................................................................................................................................................... 22 1 17 0.06 1 0 1 0 0 0
..............................................................CGGGTTGCAGGGGGAGGGAAGAT......................................................................................................................................................................................................... 23 0 18 0.06 1 0 1 0 0 0
................................................................GGTTGCAGGGGGAGGGAAGATT........................................................................................................................................................................................................ 22 0 18 0.06 1 1 0 0 0 0
...............................................................GGGTTGCAGGGGGAGGGAAGATTT....................................................................................................................................................................................................... 24 0 18 0.06 1 0 1 0 0 0
................................................................GGTTGCAGGGGGAGGGAAGA.......................................................................................................................................................................................................... 20 0 18 0.06 1 1 0 0 0 0
...................................................................TGCAGGGGGAGGGAAGATTT....................................................................................................................................................................................................... 20 0 19 0.05 1 1 0 0 0 0
.................................................................GTTGCAGGGGGAGGGAAGATTT....................................................................................................................................................................................................... 22 0 19 0.05 1 1 0 0 0 0
.................................................................GTTGCAGGGGGAGGGAAGAT......................................................................................................................................................................................................... 20 0 19 0.05 1 1 0 0 0 0
.........................................GTGAACAACCACCCACGCGGACGGG............................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
..........................AGAAAGTTCCCCCTGGTGAACAACCAC......................................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................CCGCTCGCGCGTCGTCTGT...... 19 3 20 0.05 1 1 0 0 0 0
........................................GGTCAACAACCACCCACGCGGACGGGTT.......................................................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................AAAAAATTGGCGTGAGTA............................................................................................................. 18 2 20 0.05 1 1 0 0 0 0
....................................................CCCACGCGGACGGGTTGCA....................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
.................................................CCACCCACGCGGACGGGTTGCAGG..................................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
......................................CTGGTGAACAACCACCCACGCGGACGG............................................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0
................................GTCCCCCTGGTGAACAACCACCCACGC................................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................AAAAAAATTGGCGTGAGTAT............................................................................................................ 20 2 20 0.05 1 0 1 0 0 0
................................................ACCACCCACGCGGACGGGTTGCAGG..................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
.........................................GTGAACAACCACCCACGCGGACGG............................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
.......................................................................AGGGGAGGGAAGATTTCT..................................................................................................................................................................................................... 18 1 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................AAAAATTTGGCGTGAGTAT............................................................................................................ 19 1 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000003515:21288-21573 + dwi_296 GCGCGCACGAGGCC-ACTGATTAAAGGT--C------TT-TCAAGGGGGACCACTTGTTGGTGGGTGCGCCTGCCCAACGTCCCC-CTCCCTT-CTAAAGAGGGGTTCTC--CGCGCCGATGCTAGGCAAGAATTGTCTAAAACCATTGTATC------------TTAGTTTTAATCATAGCATTTTTGTAAACCGCACTCATAGGGCCCCGTTAGTACACTCAGAAGGCAGGGTAGTTTTAACGCACTTTATATTTCACAGTATGTCACAGCAAGGAGAAGACGATGGCGATCGCGCGGCAGATATAGCCC
dp5 Unknown_singleton_3670:494-601 - ACGACCCCAGCA---------CCAGGAA--AACAGCGAGTTC-ATGAGGGCCACTTAT-GGT-GGTGCGCTGCCGTAATGTCCTCGCCCCGC---AA--GGGGAAA---C--CGCGTCCACACTCAGTAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_306:2366-2464 + GCACCAGGAA-----------------A--ACCACG-AGTTC-ATGAGGGCCACTTATG-GT-AGTGCGCTGCCGTAATGTCCTCGCCCCGC---AA--GGGGAAA---C--CGCGTCCACACTCAGTAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301591:14415-14535 + AGGAGACCAAGT-C--TTGAGA---------------------AAAGGGCCCATTTGCTGGTAGTTGCGACTACCCAACGTCCCA-CCCCATC--AG---GGGAACT--C--AATGAC-A-----GG------TCGCCCAAAACCATTTTTTT------------CTGTTGTTCATTAT-------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000452169:1885-1914 + ACGACCATGACGCT-CATGACCAAC----------C-----------------------------------------------------------------------------AGGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490276:45736-45788 + TCA----------------------------------------GTGGGGGCCACTTGCTGGACGGCGCGCCTTCCCAACGTGCCCACTCCCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778019:13497-13580 + AGGAAGCCACGT-C--TTGAGT---------------------AATGGGGCCACTTGCTGGTAGTCGCGACTACCCAACGTCCCT-CCCCGCC--AG---GGGAACT--C--AGTGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302168:223888-224018 - ----------------------------------------------GGGGCCACTTGCTGGAGGGTGTGCCTTCCCAACGTTCCA-CTTCCCT--AG--TGGGAACT--CAACGCTCC--------------------TAGTGCCACTGTAGCGAACCTTTTTTCCC--------------CATGATTACTAACTAAACTATTAAAGCCCAGTTAGTA----------------------------------------------------------------------------------------------
droTak1 scf7180000415848:5671-5754 + GCAG-------GCC-ACTGAGAAAGGAGCCAACGCGGAG-TCAGTGGGGGCCACTTGATGGAAGGTGCGCCTTCCCAACGTCCTCACTCCCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409885:145072-145139 - A-------------------------------------------GTGGGGCCACTTGCTGGAGGGTGCGCTTTCCCAACGTTCCA-CTTCCCT--AG--TGGGACATCAC--CGCGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2L_random_028:1354616-1354709 + GCGCT--CGAGC-C--CTGGTCGAAGGT--ACCAGAGTG-TC-ATGGGGGCCACTTGGTGCTGGACGCGCTCAGCCAACGTCCCCACCTCCCTTTGG---GGGAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:22017831-22017926 - GAGCAGACGTGACCTACTGGTCAAGGAT--ATCAGGGTA-TC-ATGGGGGCCACTTGACGCTGGGTGCGCTCAGCCAACGTCCCCACCCCCGC--TG--GGGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GCGCGCACGAGGCC-ACTGATTAAAGGT--C------TT-TCAAGGGGGACCACTTGTTGGTGGGTGCGCCTGCCCAACGTCCCC-CTCCCTT-CTAAAGAGGGGTTCTC--CGCGCCGATGCTAGGCAAGAATTGTCTAAAACCATTGTATC------------TTAGTTTTAATCATAGCATTTTTGTAAACCGCACTCATAGGGCCCCGTTAGTACACTCAGAAGGCAGGGTAGTTTTAACGCACTTTATATTTCACAGTATGTCACAGCAAGGAGAAGACGATGGCGATCGCGCGGCAGATATAGCCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCA......................................2342.00805030
...........................................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCAA.....................................2441.00404000
..................................................................................................................................................................................................CGCACTCATAGGGCCCCGTTAG................................................................................................2231.00303000
...........................................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGC.......................................2280.75606000
..............................................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAGGA..................................2440.75302010
..............................................................................................................................................................................................................................................................................................TGGCGATCGCGCGGCAGATATAGC..2430.67201010
........................................................................................................................................................................................................................................................................................AGACGATGGCGATCGCGCGGCAGAT.......2520.50100010
...........................................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCAAGGA..................................2740.50200020
........................................................................................................................................................................................................................................................................TGTCACAGCAAGGAGAAGACGATGGCGA....................2820.50101000
......................................................................................................................................................................................................................................................................TATGTCACAGCAAGGAGAAGACGATGGC......................2820.50101000
................................................................................................................................................................................................................................................................TCACAGTATGTCACAGCAAG....................................2040.50202000
..............................................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAG....................................2240.50200020
......................................................................................................................................................................................ATTTTTGTAAACCGCACTCATAGGGC........................................................................................................2630.33101000
......................................................................................................................................................................................ATTTTTGTAAACCGCACTCATAGGG.........................................................................................................2530.33101000
..................................................................................................................................................................................................CGCACTCATAGGGCCCCGTTAGTACACT..........................................................................................2830.33101000
................................................................................................................CGCGCCGATGCTAGGCAAGAATTG................................................................................................................................................................................2430.33101000
..................................................................................................................................................................................................CGCACTCATAGGGCCCCGTTAGTAC.............................................................................................2530.33101000
...................................................................................................................................................................................................GCACTCATAGGGCCCCGTTAGTACACT..........................................................................................2730.33100010
................................................................................................................................................................................................................................................................TCACAGTATGTCACAGCAAGGAGAAGA.............................2730.33100010
..................................................................................................................................................................................................................................................................ACAGTATGTCACAGCAAGGAGAAGACG...........................2730.33100010
................................................................................................................................................................................................ACCGCACTCATAGGGCCCCGTTAGTA..............................................................................................2630.33101000
................................................................................................................................................................................................ACCGCACTCATAGGGCCCCGTTAGTACAC...........................................................................................2930.33101000
................................................................................................................................................................................................ACCGCACTCATAGGGCCCCGTTAG................................................................................................2430.33101000
..................................................................................................................................................................................................CGCACTCATAGGGCCCCGTTAGT...............................................................................................2330.33101000
.............................................................................................................................................................................AATCATAGCATTTTTGTAAACCGC...................................................................................................................2440.25101000
...............................................................................................................................................................................................................................................................TTCACAGTATGTCACAGCAAGG...................................2240.25101000
......................................................................................................................................TGTCTAAAACCATTGTATC------------TTAGTTT............................................................................................................................................2640.25101000
...........................................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCAAG....................................2540.25101000
............................................................................................................................................................................................................................................................TATTTCACAGTATGTCACAGCA......................................2240.25101000
..............................................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAGGAG.................................2540.25100010
...............................................................................................................................................................................................................................................................TTCACAGTATGTCACAGCAAGGAGAA...............................2640.25100010
..............................................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAGGAGAA...............................2740.25101000
..............................................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCAAGGAGA................................2640.25100010
.....................................................................................................................................................................TTAGTTTTAATCATAGCATTTTTG...........................................................................................................................2440.25101000
..........................................................................................................................................................................................................................................................TATATTTCACAGTATGTCACAG........................................2290.22202000
................................................................................................................................................................................................ACCGCACTCATAGGGCCCCGTT..................................................................................................2250.20101000
.........................................................................................................................................................................................TTTGTAAACCGCACTCATAGGGCCCCG....................................................................................................2750.20101000
..........................................................................................................................................................................................TTGTAAACCGCACTCATAGGGCCC......................................................................................................2450.20101000
...............................................................................................................................................................................................AACCGCACTCATAGGGCCCCGT...................................................................................................2250.20101000
................................................................................................................................................................................................ACCGCACTCATAGGGCCCCGTTA.................................................................................................2350.20101000
.................................................................TGCGCCTGCCCAACGTCCCC-CTCCC.............................................................................................................................................................................................................................25140.14202000
.................................................................TGCGCCTGCCCAACGTCCCC-CTCC..............................................................................................................................................................................................................................24140.14202000
...................................................................................................................................................................................................................................................................CAGTATGTCACAGCAAGGAGAAG..............................23160.13201100
............................................................................................................................................................................................................................................................TATTTCACAGTATGTCACAGC.......................................2180.13101000
...........................................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAG........................................2190.11101000
...........................................................................................................................................................................................................................................................ATATTTCACAGTATGTCACA.........................................2090.11100010
........................................................................................................................................................................................TTTTGTAAACCGCACTCATAGG..........................................................................................................22200.10202000
..................................................................................................................................................TTGTATC------------TTAGTTTTAATCATAGC..................................................................................................................................24140.07101000
.................................................................TGCGCCTGCCCAACGTCCCC-CTCCCT............................................................................................................................................................................................................................26140.07101000
.............................................................................................................................................AACCATTGTATC------------TTAGTTTTAATCATAGC..................................................................................................................................29140.07101000
.................................................................TGCGCCTGCCCAACGTCCCC-CTCCCTT-C.........................................................................................................................................................................................................................28140.07101000
.............................................................................................................................................AACCATTGTATC------------TTAGTTTTAATCAT.....................................................................................................................................26160.06101000
...................................................................................................................................................................................................................................................................CAGTATGTCACAGCAAGGAGAAGA.............................24160.06101000
...................................................................CGCCTGCCCAACGTCCCC-CTCCC.............................................................................................................................................................................................................................23170.06101000
.......................................................................TGCCCAACGTCCCC-CTCCCTT-..........................................................................................................................................................................................................................21170.06100010
...................................................................CGCCTGCCCAACGTCCCC-CTC...............................................................................................................................................................................................................................21170.06101000
.............................................................TGGGTGCGCCTGCCCAACGTCCC....................................................................................................................................................................................................................................23200.05100010
............................................................................................................................................................................................GTAAACCGCACTCATAGGGCC.......................................................................................................21200.05100010
..........................................................................................................................................................................................TTGTAAACCGCACTCATAGGGC........................................................................................................22200.05110000
..............................C------TT-TCAAGGGGGACCACTTGTTGGTG.........................................................................................................................................................................................................................................................26200.05101000
........................................TCAAGGGGGACCACTTGTTGG...........................................................................................................................................................................................................................................................21200.05101000
.................................................ACCACTTGTTGGTGGGTGCGC..................................................................................................................................................................................................................................................21200.05100010
..............................................................................................................................................................................................AAACCGCACTCATAGGGC........................................................................................................18200.05101000
dp5
ACGACCCCAGCA---------CCAGGAA--AACAGCGAGTTC-ATGAGGGCCACTTAT-GGT-GGTGCGCTGCCGTAATGTCCTCGCCCCGC---AA--GGGGAAA---C--CGCGTCCACACTCAGTAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................GAGTTC-ATGAGGGCCACTTAT-GG...........................................................................................................................................................................................................................................................23200.801601600000000
.................................................................TGCGCTGCCGTAATGTCCTCGCCC...............................................................................................................................................................................................................................2470.5740310000000
....................................GAGTTC-ATGAGGGCCACTTAT-G............................................................................................................................................................................................................................................................22200.4590900000000
.................................................................................CCTCGCCCCGC---AA--GGGGAAA---C--CGC.....................................................................................................................................................................................................2440.2510100000000
......................................................................TGCCGTAATGTCCTCGCCCCGC---.........................................................................................................................................................................................................................2250.2010100000000
..............................................................................TGTCCTCGCCCCGC---AA--GGGGAAA---C--........................................................................................................................................................................................................2450.2010100000000
.................................................................TGCGCTGCCGTAATGTCCTCGC.................................................................................................................................................................................................................................22110.1820200000000
.................................................................TGCGCTGCCGTAATGTCCTCGCC................................................................................................................................................................................................................................23110.1820200000000
....................................GAGTTC-ATGAGGGCCACTTAT-GGT-G........................................................................................................................................................................................................................................................25140.1420200000000
........................................TC-ATGAGGGCCACTTAT-GGT-GAC......................................................................................................................................................................................................................................................23140.1420000000200
..................................................................GCGCTGCCGTAATGTCCTCGCCC...............................................................................................................................................................................................................................2370.1410100000000
....................................GAGTTC-ATGAGGGCCACTTAT-GGT-.........................................................................................................................................................................................................................................................24170.1220200000000
......................................................................TGCCGTAATGTCCTCGCC................................................................................................................................................................................................................................18110.0910100000000
........................................TC-ATGAGGGCCACTTAT-GGT-GT.......................................................................................................................................................................................................................................................22140.0710000100000
........................................TC-ATGAGGGCCACTTAT-GGT-GGTGCG...................................................................................................................................................................................................................................................26140.0710100000000
.........................................C-ATGAGGGCCACTTAT-GGT-GGTG.....................................................................................................................................................................................................................................................23140.0710100000000
........................................TC-ATGAGGGCCACTTAT-GGT-GG.......................................................................................................................................................................................................................................................22140.0710100000000
....................................................ACTTAT-GGT-GGTGCGCTGCC..............................................................................................................................................................................................................................................20150.0710100000000
...............................................GGGCCACTTAT-GGT-GGTGCGCTG................................................................................................................................................................................................................................................23150.0710100000000
....................................GAGTTC-ATGAGGGCCACTTAT-GT...........................................................................................................................................................................................................................................................23200.0510100000000
.....................................AGTTC-ATGAGGGCCACTTAT-GG...........................................................................................................................................................................................................................................................22200.0510100000000
.......................................TTC-ATGAGGGCCACTTAT-GG...........................................................................................................................................................................................................................................................20200.0510100000000
.....................................AGTTC-ATGAGGGCCACTTAT-G............................................................................................................................................................................................................................................................21200.0510100000000
...................................CGAGTTC-ATGAGGGCCACTTAT-GG...........................................................................................................................................................................................................................................................24200.0510100000000
droPer2
GCACCAGGAA-----------------A--ACCACG-AGTTC-ATGAGGGCCACTTATG-GT-AGTGCGCTGCCGTAATGTCCTCGCCCCGC---AA--GGGGAAA---C--CGCGTCCACACTCAGTAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................TCGCCCCGC---AA--GGGGAAA---C--CGCGTC..................................................................................................................................................................................................25140.071010000
.......................................................................................CCCGC---AA--GGGGAAA---C--CGCGTC..................................................................................................................................................................................................21160.061010000
...................................G-AGTTC-ATGAGGGCCACTTATG-GT-AG.......................................................................................................................................................................................................................................................26200.051010000
.................................................................TGCGCTGCCGTAATGTCCTCGC.................................................................................................................................................................................................................................22200.051010000
..................................CG-AGTTC-ATGAGGGCCACTTATG-GT-AG.......................................................................................................................................................................................................................................................27200.051010000
droKik1
AGGAGACCAAGT-C--TTGAGA---------------------AAAGGGCCCATTTGCTGGTAGTTGCGACTACCCAACGTCCCA-CCCCATC--AG---GGGAACT--C--AATGAC-A-----GG------TCGCCCAAAACCATTTTTTT------------CTGTTGTTCATTAT-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ACGACCATGACGCT-CATGACCAAC----------C-----------------------------------------------------------------------------AGGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCA----------------------------------------GTGGGGGCCACTTGCTGGACGGCGCGCCTTCCCAACGTGCCCACTCCCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGGAAGCCACGT-C--TTGAGT---------------------AATGGGGCCACTTGCTGGTAGTCGCGACTACCCAACGTCCCT-CCCCGCC--AG---GGGAACT--C--AGTGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
----------------------------------------------GGGGCCACTTGCTGGAGGGTGTGCCTTCCCAACGTTCCA-CTTCCCT--AG--TGGGAACT--CAACGCTCC--------------------TAGTGCCACTGTAGCGAACCTTTTTTCCC--------------CATGATTACTAACTAAACTATTAAAGCCCAGTTAGTA----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCAG-------GCC-ACTGAGAAAGGAGCCAACGCGGAG-TCAGTGGGGGCCACTTGATGGAAGGTGCGCCTTCCCAACGTCCTCACTCCCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
A-------------------------------------------GTGGGGCCACTTGCTGGAGGGTGCGCTTTCCCAACGTTCCA-CTTCCCT--AG--TGGGACATCAC--CGCGCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
GCGCT--CGAGC-C--CTGGTCGAAGGT--ACCAGAGTG-TC-ATGGGGGCCACTTGGTGCTGGACGCGCTCAGCCAACGTCCCCACCTCCCTTTGG---GGGAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GAGCAGACGTGACCTACTGGTCAAGGAT--ATCAGGGTA-TC-ATGGGGGCCACTTGACGCTGGGTGCGCTCAGCCAACGTCCCCACCCCCGC--TG--GGGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:44 PM