ID:

dwi_288

 Coordinate:

scf2_1100000003202:440-590 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.3 -12.6 -12.5

Flybase annnotation

CDS [Dwil\GK15996-cds]; exon [dwil_GLEANR_16254:1]; intron [Dwil\GK15996-in]

Repeatable elements

NameClassFamilyStrand
BEL-1_DWil-LTRLTRPao-
mature
  1. scf2_1100000001153:1626-1649 +
  2. scf2_1100000001268:8492-8515 +
  3. scf2_1100000003178:2631-2654 +
  4. dwi_288  scf2_1100000003202:503-526 +
  5. scf2_1100000003202:4040-4063 +
  6. scf2_1100000011021:873-896 +
  7. scf2_1100000013685:460-483 +
  8. scf2_1100000001950:1312-1335 +
  9. scf2_1100000002009:1431-1454 +
  10. scf2_1100000002094:1129-1152 +
  11. scf2_1100000002285:1749-1772 +
  12. scf2_1100000004388:386-409 +
  13. scf2_1100000012157:569-592 +
  14. scf2_1100000004689:4037-4060 +
  15. scf2_1100000004900:2047-2070 +
  16. scf2_1100000004933:126149-126172 +
  17. scf2_1100000004968:1582480-1582503 +
  18. scf2_1100000007505:349-372 +
  19. scf2_1100000000343:296-319 +
  20. scf2_1100000000135:8337-8360 +
star
  1. scf2_1100000005232:60-83 +
  2. scf2_1100000002874:184-207 +
  3. scf2_1100000012853:375-398 +
  4. scf2_1100000003344:1660-1683 +
  5. scf2_1100000002094:1066-1089 +
  6. scf2_1100000002285:1686-1709 +
  7. scf2_1100000012157:506-529 +
  8. scf2_1100000004658:18595-18618 +
  9. scf2_1100000004936:10686-10709 +
  10. scf2_1100000004936:19315-19338 +
  11. scf2_1100000004936:70005-70028 +
  12. scf2_1100000004956:586777-586800 +
  13. scf2_1100000004956:1176283-1176306 +
  14. scf2_1100000004956:1187608-1187631 +
  15. scf2_1100000004961:2872678-2872701 +
  16. scf2_1100000004961:2884802-2884825 +
  17. scf2_1100000004967:3909211-3909234 +
  18. scf2_1100000009788:639-662 +
  19. scf2_1100000012504:676-699 +
  20. scf2_1100000000343:233-256 +
  21. scf2_1100000005137:215-238 +
  22. scf2_1100000001153:1563-1586 +
  23. dwi_288  scf2_1100000003202:440-463 +
  24. scf2_1100000003202:3977-4000 +
  25. scf2_1100000003211:890-913 +
  26. scf2_1100000001950:1249-1272 +
  27. scf2_1100000003723:5191-5214 +
  28. scf2_1100000003904:2798-2821 +
  29. scf2_1100000004388:323-346 +
  30. scf2_1100000004521:12534112-12534135 +
  31. scf2_1100000004925:59340-59363 +
  32. scf2_1100000004933:126086-126109 +
  33. scf2_1100000004966:172416-172439 +
  34. scf2_1100000004968:1582417-1582440 +
  35. scf2_1100000004968:1591650-1591673 +
  36. scf2_1100000004968:2479519-2479542 +
  37. scf2_1100000004968:2488444-2488467 +
  38. scf2_1100000007505:286-309 +
  39. scf2_1100000007620:753-776 +
  40. scf2_1100000000135:8274-8297 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GATACAGTCTCAAGTGGTTGGCGGGTGCCAATATCTTCAGGGTCTCGTACGTGAGTAGAATGATTAAAACGCGCGAAAAACTTCGTTTTGATTCTATGTTTGATTTATTTAATTCACAAGGTATACCGACACACACACGAAATGGTTCGGTTTTAAGAAGTGACAAATCGCAAAATAAAGTTAAAGGAGATGAACGGGTGTTCGGGTGAAAATCTCGATTCTGAATAATGGCGATGCCCATTGGAAAAAAC
**************************************************((((((.((((((...(((((.(((((....)))))..........)))))...)))))).))))))....................****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body
.....................................................................................................................................................................................TAAAGGAGATGAACGGGTGTTCGG.............................................. 24 0 20 1.30 26 0 26 0
.....................................................................................................................................................................................TAAAGGAGATGAACGGGTGTTCGGG............................................. 25 0 20 0.80 16 16 0 0
.......TCTCAAGTGGTTGGCGGGTGCCAATA.......................................................................................................................................................................................................................... 26 0 20 0.75 15 13 2 0
..TACAGTCTCAAGTGGTTGGCGGG.................................................................................................................................................................................................................................. 23 0 14 0.71 10 8 2 0
..TACAGTCTCAAGTGGTTGGCGG................................................................................................................................................................................................................................... 22 0 14 0.71 10 7 3 0
.........TCAAGTGGTTGGCGGGTGCCAATA.......................................................................................................................................................................................................................... 24 0 20 0.45 9 9 0 0
..TACAGTCTCAAGTGGTTGGCGGGT................................................................................................................................................................................................................................. 24 0 14 0.36 5 5 0 0
...............................TATCTTCAGGGTCTCGTACGTGAG.................................................................................................................................................................................................... 24 0 20 0.35 7 0 7 0
.................................................................................................................TCACAAGGTATACCGACACACACA.................................................................................................................. 24 0 20 0.35 7 0 7 0
...............................TATCTTCAGGGTCTCGTACG........................................................................................................................................................................................................ 20 0 20 0.25 5 0 5 0
..................................................GTGAGTAGAATGATTAAAACGCGC................................................................................................................................................................................. 24 0 20 0.25 5 5 0 0
.........................................................................................................................TATACCGACACACACACGAAATGGTT........................................................................................................ 26 0 20 0.20 4 1 3 0
.........................TGCCAATATCTTCAGGGTCTCGTAC......................................................................................................................................................................................................... 25 0 20 0.20 4 0 4 0
.....................................................................................................................................................................................TAAAGGAGATGAACGGGTGTTCGGGT............................................ 26 0 20 0.20 4 4 0 0
...............................................................................................................................................................................................................GAAAATCTCGATTCTGAATAATGGCGA................. 27 0 13 0.15 2 0 2 0
.......TCTCAAGTGGTTGGCGGGTGCCAA............................................................................................................................................................................................................................ 24 0 20 0.15 3 2 1 0
............................................TCGTACGTGAGTAGAATGATTAAAACG.................................................................................................................................................................................... 27 0 20 0.15 3 0 3 0
.................................................................................................................TCACAAGGTATACCGACACACACACG................................................................................................................ 26 0 20 0.15 3 3 0 0
.............................AATATCTTCAGGGTCTCGTAC......................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0
..TACAGTCTCAAGTGGTTGGCG.................................................................................................................................................................................................................................... 21 0 14 0.14 2 1 1 0
..TACAGTCTCAAGTGGTTGGCGGGTG................................................................................................................................................................................................................................ 25 0 14 0.14 2 2 0 0
.......................GGTGCCAATATCTTCAGGGTCTCG............................................................................................................................................................................................................ 24 0 20 0.10 2 0 2 0
.............................................................................................................TAATTCACAAGGTATACCGACACACA.................................................................................................................... 26 0 20 0.10 2 0 2 0
..................................................GTGAGTAGAATGATTAAAACGCGCGAA.............................................................................................................................................................................. 27 0 20 0.10 2 2 0 0
...................................................................................................................ACAAGGTATACCGACACACACACGAAA............................................................................................................. 27 0 20 0.10 2 2 0 0
..............................................................................................................................................................................................TGAACGGGTGTTCGGGTGAAAATCTC................................... 26 0 20 0.10 2 2 0 0
........................................................AGAATGATTAAAACGCGCGAAAAACT......................................................................................................................................................................... 26 0 20 0.10 2 0 2 0
.......TCTCAAGTGGTTGGCGGGTGCCAAT........................................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0
.....................................................................................................................................................................................TAAAGGAGATGAACGGGTGT.................................................. 20 0 20 0.10 2 0 0 2
..TACAGTCTCAAGTGTTTGGCGG................................................................................................................................................................................................................................... 22 1 14 0.07 1 1 0 0
..TACAGTCTCAAGTGGTTGGCGGGC................................................................................................................................................................................................................................. 24 1 14 0.07 1 1 0 0
..TACAGTCTCAAGTGGTTGGCGGGTGC............................................................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0
..TACAGTCTCAAGTGGTTGGAGGGT................................................................................................................................................................................................................................. 24 1 14 0.07 1 1 0 0
GATACAGTCTCAAGTGGTTGGCGGG.................................................................................................................................................................................................................................. 25 0 14 0.07 1 0 1 0
...ACAGTCTCAAGTGGTTGGCGGGTG................................................................................................................................................................................................................................ 24 0 14 0.07 1 0 1 0
.ATACAGTCTCAAGTGGTTGGCGGGTG................................................................................................................................................................................................................................ 26 0 14 0.07 1 0 1 0
..TACAGTCTAAAGTGGTTGGCGGGT................................................................................................................................................................................................................................. 24 1 14 0.07 1 1 0 0
.....................................................................................................................................................................................TAAAGGAGATGAACGGGTGTTCGGTA............................................ 26 2 20 0.05 1 1 0 0
............................CAATATCTTCAGGGTCTCGTACATG...................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0
...............................................................................................................................GACACACACACGAAATGGTTCGGT.................................................................................................... 24 0 20 0.05 1 1 0 0
.................................................................................................................TCACAAGGTATGCCGACACACACA.................................................................................................................. 24 1 20 0.05 1 0 1 0
.........................TGCCAATATCTTCAGGGTCTCGTACA........................................................................................................................................................................................................ 26 1 20 0.05 1 0 1 0
...............................TATCTTCAGGGTCTCGTACGTGAGT................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0
..................................................................................................................CACAAGGTATACCGACACACACACTA............................................................................................................... 26 1 20 0.05 1 0 1 0
............................................................TGATTAAAACGCGCGAAAAACTTCGTTT................................................................................................................................................................... 28 0 20 0.05 1 0 1 0
.................................................................................................................TCACAAGGTATACCGACACACAC................................................................................................................... 23 0 20 0.05 1 0 1 0
.........................................................................................................TATTTAATTCACAAGGTATACCGA.......................................................................................................................... 24 0 20 0.05 1 0 1 0
....................................TCAGGGTCTCGTACGTGAGTAG................................................................................................................................................................................................. 22 0 20 0.05 1 0 1 0
................................................................TAAAACGCGCGAAAAACTTCGT..................................................................................................................................................................... 22 0 20 0.05 1 1 0 0
..........................................................AATGATTAAAACGCGCGAAAAACTTCG...................................................................................................................................................................... 27 0 20 0.05 1 1 0 0
.....................................................................................................................................................................................TAAAGGAGATGAACGGGTCTTCGG.............................................. 24 1 20 0.05 1 1 0 0
............................................................................................................TTAATTCACAAGGTATACCGACACACA.................................................................................................................... 27 0 20 0.05 1 0 1 0
..TAAAGTCTCAAGTGGTTGGCGGG.................................................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0
.................................................................................................................................................................................................ACGGGTGTTCGGGTGAAAATCTCGAT................................ 26 0 20 0.05 1 1 0 0
.........................TGCCAATATCTTCAGGGTCTCGTACAA....................................................................................................................................................................................................... 27 2 20 0.05 1 0 1 0
...................................................................................................................................CACACACGAAATGGTTCGG..................................................................................................... 19 0 20 0.05 1 0 1 0
.........TCAAGTGGTTGGCGGGTGCCAATATCAA...................................................................................................................................................................................................................... 28 2 20 0.05 1 1 0 0
....................................................................................................................................ACACACGAAATGGTTCGGT.................................................................................................... 19 0 20 0.05 1 0 1 0
................................................................TAAAACGCGCGAAAAACTTCG...................................................................................................................................................................... 21 0 20 0.05 1 1 0 0
.....................................................................................................................................................................................TAAAGGAGATGAATGGGTGTTCGGG............................................. 25 1 20 0.05 1 1 0 0
..............................................................................................................................................................................................TGAACGGGTGTTCGGGTGAAAATC..................................... 24 0 20 0.05 1 1 0 0
.................................TCTTCAGGGTCTCGTACGTGAGTAGA................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0
......GTCTCAAGTGGTTGGCGGGTGCCAATA.......................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0
.......TCACAAGTGGTTGGCGGGTGCCAAT........................................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0
.........................................................GAATGATTAAAACGCGCGAAAAACT......................................................................................................................................................................... 25 0 20 0.05 1 0 1 0
.....................................................................................................................AAGGTATACCGACACACACACGAA.............................................................................................................. 24 0 20 0.05 1 0 1 0
.....AGTCTCAAGTGGTTGGCGGGTG................................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0
...................................................................................................................ACAAGGTATACCGACACACACACGA............................................................................................................... 25 0 20 0.05 1 0 1 0
...........................CCAATATCTTCAGGGTCTCGTACGTGAG.................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0
....................................TCAGGGTCTCGTACGTGAGTAGA................................................................................................................................................................................................ 23 0 20 0.05 1 0 1 0
...................GGCGGGTGCCAATATCTTCAGGGTC............................................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0

Anti-sense strand reads

CTATGTCAGAGTTCACCAACCGCCCACGGTTATAGAAGTCCCAGAGCATGCACTCATCTTACTAATTTTGCGCGCTTTTTGAAGCAAAACTAAGATACAAACTAAATAAATTAAGTGTTCCATATGGCTGTGTGTGTGCTTTACCAAGCCAAAATTCTTCACTGTTTAGCGTTTTATTTCAATTTCCTCTACTTGCCCACAAGCCCACTTTTAGAGCTAAGACTTATTACCGCTACGGGTAACCTTTTTTG
******************************************************************************************************************((((((.((((((...(((((.(((((....)))))..........)))))...)))))).))))))....................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
....................................................................................................................GTTCCATATGGCTGTGTGTGTGCTT.............................................................................................................. 25 0 20 1.20 24 24 0 0 0
................................................................................................ACAAACTAAATAAATTAAGTGTTCCAT................................................................................................................................ 27 0 20 0.55 11 11 0 0 0
................................................................................................................................TGTGTGTGTGCTTTACCAAGCCAAAAT................................................................................................ 27 0 20 0.45 9 9 0 0 0
......................................TCCCAGAGCATGCACTCATCTTACT............................................................................................................................................................................................ 25 0 20 0.35 7 7 0 0 0
.......................................CCCAGAGCATGCACTCATCTTA.............................................................................................................................................................................................. 22 0 20 0.25 5 5 0 0 0
...............CCAACCGCCCACGGTTATAGAAGTCC.................................................................................................................................................................................................................. 26 0 20 0.20 4 2 2 0 0
...................................................................................................................................GTGTGTGCTTTACCAAGCCAAAAT................................................................................................ 24 0 20 0.20 4 4 0 0 0
.............................TTATAGAAGTCCCAGAGCATGCACT..................................................................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0
....GTCAGAGTTCACCAACCGCCCACGGTTAT.......................................................................................................................................................................................................................... 29 0 14 0.14 2 0 2 0 0
................................................................................................................................................................................TTTCAATTTCCTCTACTTGCCCACA.................................................. 25 0 9 0.11 1 1 0 0 0
..........................................AGAGCATGCACTCATCTTACTAATTT....................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0
..................................................................................................................................................................................TCAATTTCCTCTACTTGCCCACAAGCCCA............................................ 29 0 10 0.10 1 1 0 0 0
..................................................................................................................................................................................TCAATTTCCTCTACTTGCCCACAAGCCC............................................. 28 0 10 0.10 1 1 0 0 0
..................................................................................................................................TGTGTGTGCTTTACCAAGCCAAAAT................................................................................................ 25 0 20 0.10 2 2 0 0 0
........................................................................................................................................................................................................AAGCCCACTTTTAGAGCTAAGACTTAT........................ 27 0 13 0.08 1 0 1 0 0
..ATGTCAGAGTTCACCAACCGCCCACGGT............................................................................................................................................................................................................................. 28 0 14 0.07 1 1 0 0 0
....GTCAGAGTTCACCAACCGCCCACGGT............................................................................................................................................................................................................................. 26 0 14 0.07 1 0 1 0 0
.................................AGAAGTCCCAGAGCAAGCACTCATCTT............................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0
.........AGTTCACCAACCGCCCACGGTTA........................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
.......................................CCCACAGCATGCACTCATCTTACTAATT........................................................................................................................................................................................ 28 1 20 0.05 1 1 0 0 0
.............CACCAACCGCCCACGGTTATAGAAG..................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
..........GTTCACCAACCGCCCACGGTGAT.......................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0
........................................................................................................AATAAATTAAGTGTTCCATATGGCTGT........................................................................................................................ 27 0 20 0.05 1 1 0 0 0
............................................................................................................................................................................................CTACTTGCCCACAAGCCCACTTT........................................ 23 0 20 0.05 1 1 0 0 0
...............................................................................................AACAAACTAAATAAATTAAGTGTTCCA................................................................................................................................. 27 1 20 0.05 1 1 0 0 0
..................................GAAGTCCCAGAGCATGCACTCATCTTACT............................................................................................................................................................................................ 29 0 20 0.05 1 1 0 0 0
................TAACCGCCCACGGTTATAGAAGTCCC................................................................................................................................................................................................................. 26 1 20 0.05 1 0 0 0 1
................CAGCCGCCCACGGTTATAGAAGTCC.................................................................................................................................................................................................................. 25 1 20 0.05 1 0 1 0 0
................CAACCGCCCACGGTTATAGAAGTCCCAGA.............................................................................................................................................................................................................. 29 0 20 0.05 1 0 0 1 0
...........................................................................................................................ATGGCTGTGTGTGTGCTT.............................................................................................................. 18 0 20 0.05 1 1 0 0 0
...........................GGTTATAGAAGTCCCAGAGCATGCACT..................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0
......CAGAGTTCACCAACCGCCCACGGTTAT.......................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
.........................................................................................................ATAAATTAAGTGTTCCATATGGCTGT........................................................................................................................ 26 0 20 0.05 1 1 0 0 0
......................................................................................................TAAATAAATTAAGTGTTCCATATGGCT.......................................................................................................................... 27 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000003202:390-640 + dwi_288 GATACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------CAATATCTTCAGGGTCTCGT-------ACGTGAGTAGAAT-GATTAAAACGCGCGA--A-AAACTTCGTTTTGATTCTATGTTTGATTTAT-TTAATTCACAAGGTATACCGACACACACACGAAATGGTTCGGTTTTAAGAAGTGACAAATCGCAAAATAAAGTTAAAGGAGATGAACGGGTGTTCGGGTGAAAATCTCGATTCTGAATAATGGCGATGCCCATTG-GAAAAAAC
droVir3 scaffold_13045:603547-603695 - AA------------------------------------------------------------------AGAATA---------------------TGTCTAATGG-TCTCTTGTTAGTTGTCGAGTGTATAGTGTAGTTG------------TATTCGTATATTGATTTGTTAAGTAGTTCTTCGAATGTTCTGTGTTCCT-----------------------GT-TTTCTTTT-G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTTGAATGAAATC
droMoj3 scaffold_6114:4406-4548 - TAT---------------------------------------------------------------------------------------------ATCTGCTGG-TTTTTGTTTTGTAACAGAATGTACAGTGTTATTG------------TATCGATCTACCGAAATATTTACTAATTCCTTAAATGAGTATTTTGAAT-----------------------TT-TGTTGCTT-T-------------------------------------AAGCATCTAAAT------------------------------------------------------------ATTTCCAAAAAGGTTGAATGAAATC
droGri2 scaffold_14906:13491191-13491384 - ATCTCTGACTCTG-------ATTC------------T-TT-----TTCGTTCAATTTTTGGTGGTCGAAAAATA---------------------TGTCTATTGG-TTTTGCACTTACTGTGGAATGTAAAGATTGGTTG------------TATAATTGAATGGATTTAAATATTGAGTCTTCAAAAT-TCGATATTCCT-----------------------TC-AT-----------------------------------------------CCTTCGGTTA--------------------------------------------ATTTTGGT--TAGTTTGTTTCGGTTTATTTTGAATGAAATC
dp5 Unknown_singleton_8:1081-1219 - TCT-------------------------------------------------------------------------------------------------AGTGG-TCTTTTGTTTGTTACCGAATGTACAGAGTAATTG------------TATTCATAAATTGCCCTATCCAATAATTCCTCAAATGTCCGATGTTCCT-----------------------GC-ATTGTTAT-T-------------------------------------ATGCATCTCATG------------------------------------------------------------ATCTCCGAAAGGGTAGAGTGGAATC
droPer2 scaffold_81:33171-33216 - TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTT-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATTTCGGTCAGGGTGCTATGAAAGC
droAna3 scaffold_13099:2920129-2920301 - GTTTCTGGAT------------TTGCAGGTACATTT-CTCCCAAA-----------------------AAAATA---------------------TAT------G-TTTTTTTGCAGCCACTCAATGTACTGTGGAATTA------------ATCTTATAAATGGATCTGTCTAATAGTTCCTCGAAAGTTCTTAGCTCCT-----------------------GT-TTAGCTTG-G-------------------------------------GGACAACGAATG------------------------------------------------------------ATCTCTGAAAGTGGCGAATGAAATC
droBip1 scf7180000391343:29853-29965 - GT----------------------------------------------------------------------------------------------------------------------------GAAGGGTTCTATTG------------TATTCTATAGACGCGAGTAGCATTAATTCAACCGTGTCCTCA-ATACCT-----------------------CTTTCGATTTT-T-------------------------------------AAGCACCGTGCA------------------------------------------------------------ATTTCTGTTAGTGTACTGTGGAATC
droKik1 scf7180000301002:1074-1120 - TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTTT-A-------------------------------------TGACACCTAATA------------------------------------------------------------ATTTCTGATAATGTTGAATGAAAAC
droFic1 scf7180000454095:10941-11047 - TG----------------------------------------------------------------------------------------------------------------------------------AATGGTTA------------TATTCTTTCACCGCTTTGAAAATCAAGTCTTCGAAAGTGGCTGTAGCTT-----------------------CG-TCTCGTTT-G-------------------------------------AGACATCTTAAA------------------------------------------------------------ATTTCGGACATTGTTGAATGAAATC
droEle1 scf7180000486627:2140-2310 - ATTTTCTTTTTTA-------TTT--------------CTTCTCGT-----------------------GTTTTTTATGTCTTCT----------------GTT------GAACTTTGTTACAGAATGTATGGATTTATTA------------TATTCCTGAACGGCTTTAAAGATTAAATCCTCAAATGATATGCTCCCTT-----------------------TG-TCTTTTTT-G-------------------------------------AGACACCGCATG------------------------------------------------------------ATTTCAAATAGGGTTACATGAAACC
droRho1 scf7180000766902:1242-1361 - T----------------------------------------------------------------------------------------------------------------------ACTGAATGTATTGTGTAATTG------------TATTCGTAAATGGCTCTGTCTAATAATTCTTCAAAGGTGTTGTATATTT-----------------------GT-TTGGTTTTAA-------------------------------------AGGCATCTCATT------------------------------------------------------------ATTTCCGAAAGGGTCGAATGAAATC
droBia1 scf7180000299930:2159-2271 - G----------------------------------------------------------------------------------------------------------------------------TGGATTGTGTAATTA------------TATTCGTAAACGGCTCTATTTAATAGTTCTTCAAAAGTATTGTAAAAAT-----------------------GT-TTTGTCTT-A-------------------------------------ATGCATCGCATT------------------------------------------------------------ATTTCAGACAGAGTGGAATGAAACC
droTak1 scf7180000414137:6025-6209 - TTCTGTTTTTGTTGTTCTAGGGTC------------T-GC-----TTCCTATAATTTGTGAGG---------------------------------CCCTGATAA-TTTATTGATTGTCGTTGAATGGAATGAATTGTTA------------TACTTGTCCACCGCGATGAAAGCCAACTCAATCGGTTTTAGTTTGGGGT-----------------------GG-TCATTTCT-T-------------------------------------AAGCACCTGTAT------------------------------------------------------------ATTGTAATGAAGGTTGAGTGGAATC
droEug1 scf7180000407915:950-1119 - TTTATT----------CTAGAAGT---------------------------------------------------------TCGGTTGAAAAAATTGTCAACGGATTTTTTTATTTGTCACCGAGTGGACAGAGTTATTG------------TATCTGTCTACAACCATTGAGATAAGCTCGTTTGGTTTAAAGGTGGGAT-----------------------AT-TCGCCTTT-C-------------------------------------AAGCATCGATAT------------------------------------------------------------ATTTCCATGAAGGTAGAATGGAATC
dm3 chr3LHet:188756-188868 - G----------------------------------------------------------------------------------------------------------------------------TGAATGGAGTTATTG------------TATTTAATTATAGATCTGCCTATAAGATCTCTTATGGAACTATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCACTTAAGGTTGAATGGAAAC
droSim2 node_3298:4549-4675 - TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAGTTG------------TATTCGTAGACAGCTGAATCTAATAGTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAAACC
droSec2 scaffold_115:88565-88679 - G--------------------------------------------------------------------------------------------------------------------------AGTGAATGGAGTAATTG------------TATTTAATTATAGATCTGCCTATGAGATCTCTTATGGAACTATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCAGTTCAGGTTGAATGGAAAC
droYak3 v2_chrUn_4989:288664-288797 - TG------------------------------------------------------------------------------------------------------G-TCGTTGTTTTGTTACGGATTGTATTGAGTAATTA------------TACTCATAAACGGACCTGTCTAATATTTCTTCAAATGTTCGGTGCACCT-----------------------GT-TTTGCTTT-T-------------------------------------AAAGATCTCATG------------------------------------------------------------GTTTCGGCAAGAGTGGAATGGAATC
droEre2 scaffold_4838:2751-2899 - AA------------------------------------------------------------------AAAATA---------------------TTTCTTATGG-TCGTTTTTTTGTTACAGAGTGAATTGTGAAGTTG------------TATTCGTAGACAGCTGAATCTAATAGTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTGGTTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCGGCGAGGGTGGAATGAAACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GATACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------CAATATCTTCAGGGTCTCGT-------ACGTGAGTAGAAT-GATTAAAACGCGCGA--A-AAACTTCGTTTTGATTCTATGTTTGATTTAT-TTAATTCACAAGGTATACCGACACACACACGAAATGGTTCGGTTTTAAGAAGTGACAAATCGCAAAATAAAGTTAAAGGAGATGAACGGGTGTTCGGGTGAAAATCTCGATTCTGAATAATGGCGATGCCCATTG-GAAAAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................................................................TAAAGGAGATGAACGGGTGTTCGG...............................................24201.3026026000
............................................................................................................................................................................................................................................................................................................TAAAGGAGATGAACGGGTGTTCGGG..............................................25200.8016000160
.......TCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------CAATA.......................................................................................................................................................................................................................................26200.7515020130
..TACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGG......................................................................................................................................................................................................................................................23140.711002080
..TACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGG.......................................................................................................................................................................................................................................................22140.711003070
.........TCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------CAATA.......................................................................................................................................................................................................................................24200.45900090
..TACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGT.....................................................................................................................................................................................................................................................24140.36500050
..........................................................................................................................................TATCTTCAGGGTCTCGT-------ACGTGAG..........................................................................................................................................................................................................24200.35707000
........................................................................................................................................................................................................................................TCACAAGGTATACCGACACACACA...................................................................................................................24200.35707000
..........................................................................................................................................TATCTTCAGGGTCTCGT-------ACG..............................................................................................................................................................................................................20200.25505000
....................................................................................................................................................................GTGAGTAGAAT-GATTAAAACGCGC......................................................................................................................................................................................24200.25500050
................................................................................................................................................................................................................................................TATACCGACACACACACGAAATGGTT.........................................................................................................26200.20403010
.............................................................................................................................TGC-------CAATATCTTCAGGGTCTCGT-------AC...............................................................................................................................................................................................................25200.20404000
............................................................................................................................................................................................................................................................................................................TAAAGGAGATGAACGGGTGTTCGGGT.............................................26200.20400040
......................................................................................................................................................................................................................................................................................................................................GAAAATCTCGATTCTGAATAATGGCGA..................27130.15202000
.......TCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------CAA.........................................................................................................................................................................................................................................24200.15301020
.......................................................................................................................................................TCGT-------ACGTGAGTAGAAT-GATTAAAACG.........................................................................................................................................................................................27200.15303000
........................................................................................................................................................................................................................................TCACAAGGTATACCGACACACACACG.................................................................................................................26200.15300030
........................................................................................................................................AATATCTTCAGGGTCTCGT-------AC...............................................................................................................................................................................................................21200.15300030
..TACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCG........................................................................................................................................................................................................................................................21140.14201010
..TACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTG....................................................................................................................................................................................................................................................25140.14200020
...........................................................................................................................GGTGC-------CAATATCTTCAGGGTCTCG.........................................................................................................................................................................................................................24200.10202000
....................................................................................................................................................................................................................................TAATTCACAAGGTATACCGACACACA.....................................................................................................................26200.10202000
....................................................................................................................................................................GTGAGTAGAAT-GATTAAAACGCGCGA--A-................................................................................................................................................................................27200.10200020
..........................................................................................................................................................................................................................................ACAAGGTATACCGACACACACACGAAA..............................................................................................................27200.10200020
.....................................................................................................................................................................................................................................................................................................................TGAACGGGTGTTCGGGTGAAAATCTC....................................26200.10200020
..........................................................................................................................................................................AGAAT-GATTAAAACGCGCGA--A-AAACT...........................................................................................................................................................................26200.10202000
.......TCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------CAAT........................................................................................................................................................................................................................................25200.10200020
............................................................................................................................................................................................................................................................................................................TAAAGGAGATGAACGGGTGT...................................................20200.10200200
..TACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGC.....................................................................................................................................................................................................................................................24140.07100010
..TACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------............................................................................................................................................................................................................................................26140.07100010
GATACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGG......................................................................................................................................................................................................................................................25140.07101000
...ACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTG....................................................................................................................................................................................................................................................24140.07101000
.ATACAGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTG....................................................................................................................................................................................................................................................26140.07101000
............................................................................................................................................................................................................................................................................................................TAAAGGAGATGAACGGGTGTTCGGTA.............................................26200.05100010
......................................................................................................................................................................................................................................................GACACACACACGAAATGGTTCGGT.....................................................................................................24200.05100010
.............................................................................................................................TGC-------CAATATCTTCAGGGTCTCGT-------ACA..............................................................................................................................................................................................................26200.05101000
..........................................................................................................................................TATCTTCAGGGTCTCGT-------ACGTGAGT.........................................................................................................................................................................................................25200.05100010
..............................................................................................................................................................................T-GATTAAAACGCGCGA--A-AAACTTCGTTT.....................................................................................................................................................................28200.05101000
........................................................................................................................................................................................................................................TCACAAGGTATACCGACACACAC....................................................................................................................23200.05101000
...............................................................................................................................................................................................................................TAT-TTAATTCACAAGGTATACCGA...........................................................................................................................24200.05101000
...............................................................................................................................................TCAGGGTCTCGT-------ACGTGAGTAG.......................................................................................................................................................................................................22200.05101000
...................................................................................................................................................................................TAAAACGCGCGA--A-AAACTTCGT.......................................................................................................................................................................22200.05100010
............................................................................................................................................................................AAT-GATTAAAACGCGCGA--A-AAACTTCG........................................................................................................................................................................27200.05100010
...................................................................................................................................................................................................................................TTAATTCACAAGGTATACCGACACACA.....................................................................................................................27200.05101000
........................................................................................................................................................................................................................................................................................................................ACGGGTGTTCGGGTGAAAATCTCGAT.................................26200.05100010
.............................................................................................................................TGC-------CAATATCTTCAGGGTCTCGT-------ACAA.............................................................................................................................................................................................................27200.05101000
..........................................................................................................................................................................................................................................................CACACACGAAATGGTTCGG......................................................................................................19200.05101000
.........TCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------CAATATCAA...................................................................................................................................................................................................................................28200.05100010
...........................................................................................................................................................................................................................................................ACACACGAAATGGTTCGGT.....................................................................................................19200.05101000
...................................................................................................................................................................................TAAAACGCGCGA--A-AAACTTCG........................................................................................................................................................................21200.05100010
.....................................................................................................................................................................................................................................................................................................................TGAACGGGTGTTCGGGTGAAAATC......................................24200.05100010
............................................................................................................................................TCTTCAGGGTCTCGT-------ACGTGAGTAGA......................................................................................................................................................................................................26200.05101000
......GTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTGC-------CAATA.......................................................................................................................................................................................................................................27200.05100010
...........................................................................................................................................................................GAAT-GATTAAAACGCGCGA--A-AAACT...........................................................................................................................................................................25200.05101000
............................................................................................................................................................................................................................................AAGGTATACCGACACACACACGAA...............................................................................................................24200.05101000
.....AGTCTCAA-------GTG---------------------------------------------------------------------------------------------GTTGGCGGGTG....................................................................................................................................................................................................................................................22200.05100010
..........................................................................................................................................................................................................................................ACAAGGTATACCGACACACACACGA................................................................................................................25200.05101000
...............................................................................................................................C-------CAATATCTTCAGGGTCTCGT-------ACGTGAG..........................................................................................................................................................................................................28200.05101000
...............................................................................................................................................TCAGGGTCTCGT-------ACGTGAGTAGA......................................................................................................................................................................................................23200.05101000
.......................................................................................................................GGCGGGTGC-------CAATATCTTCAGGGTC............................................................................................................................................................................................................................25200.05101000
droVir3
AA------------------------------------------------------------------AGAATA---------------------TGTCTAATGG-TCTCTTGTTAGTTGTCGAGTGTATAGTGTAGTTG------------TATTCGTATATTGATTTGTTAAGTAGTTCTTCGAATGTTCTGTGTTCCT-----------------------GT-TTTCTTTT-G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTTGAATGAAATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTCC...........................................................................................................................................................................251720.5935000230414340114110911000000000301615351820101814961134200000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAG......................................................................................................................................................................................................................................................252013.9027800000133000000000000002800330008703800001103700000000000000000000001000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTC............................................................................................................................................................................24189.33168005025112227613022000000000176672110121150220100000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGA.......................................................................................................................................................................................................................................................24206.00120000038021015000020000000001801200000000300001100000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGT...........25164.25680000012000000000000010009225040108049011000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCG........................................................................................................................................................................................................................................................23203.1062006000000000000000000000001001900160002090000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTCCT-----------------------G..................................................................................................................................................27172.7647004050305000100000000006067200002001005000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAGT.....................................................................................................................................................................................................................................................26202.6052000000000001000000000000012161600000000700000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTCCT-----------------------...................................................................................................................................................26172.4742003060002003210000000002103300003014035000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAGTG....................................................................................................................................................................................................................................................27202.40480090000011000000000000010009900140000020200000000000000000000000
......................................................................................................................................................................................TCGAATGTTCTGTGTTCCT-----------------------GT-TTTC............................................................................................................................................25142.00280019120000000000000000000000100000000014000000000000000000000000
......................................................................................................................................................................................TCGAATGTTCTGTGTTCCT-----------------------GT-TTTCT...........................................................................................................................................26131.31171010110000000000000000000000100000000102000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTT.............................................................................................................................................................................23181.2222000060005001020000001000112100000000011000000000000000000000000
..................................................................................................................TAGTTGTCGAGTGTATAGTGTAGTTG------------...........................................................................................................................................................................................................................26200.95190000000000000000000000000013600000000000000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTC.........................................................................................................................................................................................................................................................22200.95190010000000000000000000040000101000300000000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGT..............................................................................................................................................................................22180.9417001000100010000000000002240000002000013000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTG............24170.7112000000000000000000000000006010001001030000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTT..........26160.6310000000000000100000000000402000000002010000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAGTGT...................................................................................................................................................................................................................................................28200.5511007000000000000000000000000200000000002000000000000000000000000
......................................................................................................................................................................................TCGAATGTTCTGTGTTCCT-----------------------GT-TTTCTT..........................................................................................................................................27130.547005000000001000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAGTGT...........27160.447000000000000000000000000012000003001000000000000000000000000000
.....................................................................................................................................................................................TTCGAATGTTCTGTGTTCCT-----------------------GT-TTTC............................................................................................................................................26140.436003000000000000000000000000000000001000000000000000000000000002
.................................................................................................................................................................................GTTCTTCGAATGTTCTGTGT..............................................................................................................................................................................20200.306000000100030000000000000000000000000000000000000000000000000002
...................................................................................................TAATGG-TCTCTTGTTAGTTGT..........................................................................................................................................................................................................................................................21200.306000000000000000000000000010200010000011000000000000000000000000
................................................................................................................................................................................AGTTCTTCGAATGTTCTGTGTTCC...........................................................................................................................................................................24170.295005000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAG..............22170.295001000000000000000000001101010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTTG.........27150.274000000000000000000000000000000002011000000000000000000000000000
...................................................................................................................................................................................TCTTCGAATGTTCTGTGTT.............................................................................................................................................................................19200.255000000021020000000000000000000000000000000000000000000000000000
............................................................................................................TCTTGTTAGTTGTCGAGTGTATAGTGT............................................................................................................................................................................................................................................27200.255000000000000000000000000004100000000000000000000000000000000000
............................................................................................................................................................................................................................................G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAGTG............26170.244000000000000000000000000002000000002000000000000000000000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTGTTCCT-----------------------GT-................................................................................................................................................25170.244001001000000000000000000000000000000000000000000000000000000002
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTCCC-----------------------...................................................................................................................................................26170.244001000100000000000001000000000000000000100000000000000000000000
.....................................................................................................................................................................................TTCGAATGTTCTGTGTTCCT-----------------------GT-TTTCTT..........................................................................................................................................28130.233000000000001000000000000100000000000000000000000000000000000001
......................................................................................................TGG-TCTCTTGTTAGTTGTCGAGTGT...................................................................................................................................................................................................................................................25200.204000000000000000000000000000201000000001000000000000000000000000
.....................................................................................................................................................................................TTCGAATGTTCTGTGTTCCT-----------------------GT-TT..............................................................................................................................................24160.193000000100000000000000000000000000000002000000000000000000000000
.....................................................................................................................................................................................TTCGAATGTTCTGTGTTCCT-----------------------GT-TTTCT...........................................................................................................................................27130.152000000000000000000000000000000000000000000000000000000000000002
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTG...............................................................................................................................................................................21200.153000000000000000000000000010101000000000000000000000000000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTGT..............................................................................................................................................................................19200.153000000002000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTG.................................................................................................................................................................................19200.153001000000000000000000000000000000002000000000000000000000000000
...........................................................................................................CTCTTGTTAGTTGTCGAG......................................................................................................................................................................................................................................................18200.153000000000020000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TGATAGTGTTGAATGAAATC20200.153000030000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTGTT.............................................................................................................................................................................20200.153000000100000000000000000200000000000000000000000000000000000000
.......................................................................................................................................................................................CGAATGTTCTGTGTTCCT-----------------------GT-TTTC............................................................................................................................................24140.142002000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TTGCATCTCATA------------------------------------------------------------ATATCTGATAGTGT...........26160.132001000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................TAAGTAGTTCTTCGAATGTTCTGTGT..............................................................................................................................................................................26160.132000000000000000000000000000000000000000000000001000001000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTGTTCCT-----------------------G..................................................................................................................................................24170.122001000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TCTTCGAATGTTCTGTGTTCC...........................................................................................................................................................................21170.122010000000001000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TCTCATA------------------------------------------------------------ATATCTGATAGTGTTGAAT......26170.122001000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAG..............24170.122000000000000000000000000100000001000000000000000000000000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTGTTCCT-----------------------...................................................................................................................................................23170.122001000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................TGTTCCT-----------------------GT-TTTCTTTT-G-------------------------------------.................................................................................................18170.122000000000000000000000000002000000000000000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTCCT-----------------------A..................................................................................................................................................27170.122000010000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTTG...........25170.122000000000000000000000000101000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TA------------------------------------------------------------ATATCTGATAGTGTTGAATGAAA..25180.112000000000000000000000001000100000000000000000000000000000000000
......................................................................................................TGG-TCTCTTGTTAGTTGTCGAGTGTA..................................................................................................................................................................................................................................................26200.102000000000000000000000002000000000000000000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTC............................................................................................................................................................................................................................................................19200.102000000100000000000000000000000100000000000000000000000000000000
.....................................................................................................ATGG-TCTCTTGTTAGTTGTCGAGTGTA..................................................................................................................................................................................................................................................27200.102000000000000000000000000002000000000000000000000000000000000000
.............................................................................................................CTTGTTAGTTGTCGAGTGTATAGTGT............................................................................................................................................................................................................................................26200.102000000000000000000000000000200000000000000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAT......................................................................................................................................................................................................................................................25200.102000000100000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................TCGAATGTTCTGTGTTCCT-----------------------GT-................................................................................................................................................21200.102000000000000000000000000000000000000000000000000000000000000002
..................................................................................................................TAGTTGTCGAGTGTATAGTGTAG..........................................................................................................................................................................................................................................23200.102000000000000000000000000002000000000000000000000000000000000000
...............................................................................................................TGTTAGTTGTCGAGTGTATAGTGTAGT.........................................................................................................................................................................................................................................27200.102000000000000000000000000000200000000000000000000000000000000000
......................................................................................................TGG-TCTCTTGTTAGTTGTCGAGTG....................................................................................................................................................................................................................................................24200.102000000000000000000000000002000000000000000000000000000000000000
............................................................................................................................................................................AAGTAGTTCTTCGAATGTTCTGTG...............................................................................................................................................................................24200.102000000000000000000000000000000000000002000000000000000000000000
.......................................................................................................................................................................................CGAATGTTCTGTGTTCCT-----------------------GT-TTTCT...........................................................................................................................................25130.081001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TTCTGTGTTCCT-----------------------GT-TTTCTTTT-G-------------------------------------TT...............................................................................................25130.081000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................GTTCTTCGAATGTTCTGTGTTCCT-----------------------GT-TT..............................................................................................................................................28130.081000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CTTCGAATGTTCTGTGTTCCT-----------------------GT-TT..............................................................................................................................................25130.081000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTGTTCCT-----------------------GT-TT..............................................................................................................................................27130.081000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................GAATGTTCTGTGTTCCT-----------------------GT-TTTC............................................................................................................................................23140.071001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TCGAATGTTCTGTGTTCCT-----------------------GT-TTTCC...........................................................................................................................................26140.071001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................T-----------------------GT-TTTCTTTT-G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATA......................27150.071000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TA------------------------------------------------------------ATATCTGATAGTGTTGAATGAAATC27150.071000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................CT-----------------------GT-TTTCTTTT-G-------------------------------------TTGCATCTCATA------------------------------------------------------------AT.......................27150.071000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................TAAGTAGTTCTTCGAATGTTCTGTGTC.............................................................................................................................................................................27160.061000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTCT.........27160.061000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTA..........28160.061000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTCC.........27160.061000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTTT.........27160.061000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................TCGAATGTTCTGTGTTCCT-----------------------GT-TT..............................................................................................................................................23160.061000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTA..........26160.061000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................CGAATGTTCTGTGTTCCT-----------------------GT-TTTCTC..........................................................................................................................................26160.061001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TCGAATGTTCTGTGTTCCT-----------------------GT-TTT.............................................................................................................................................24160.061001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTATG........28160.061000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGTC..........26160.061000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TTGCATCTCATA------------------------------------------------------------ATATCTGATAGTG............25170.061001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTGTTCCT-----------------------GT-T...............................................................................................................................................26170.061000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................TTGCATCTCATA------------------------------------------------------------ATATCTGATAG..............23170.061000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................AGTTCTTCGAATGTTCTGTGTTCCC-----------------------...................................................................................................................................................25170.061001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AGTTCTTCGAATGTTCTGTGTTCCT-----------------------GT-T...............................................................................................................................................28170.061001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGTGA...........25170.061000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................AGTTCTTCGAATGTTCTGTGTTCCT-----------------------G..................................................................................................................................................26170.061001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAGAA............26170.061000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................TCTTCGAATGTTCTGTGTTCCT-----------------------...................................................................................................................................................22170.061000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATA...............21170.061000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................................................................GTAGTTCTTCGAATGTTCTGTGTTCC...........................................................................................................................................................................26170.061000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................TT-G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAGTG............28170.061000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTG..................20170.061000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGCATCTCATA------------------------------------------------------------ATATCTGATAGT.............23170.061000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTCA...........................................................................................................................................................................25180.061000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTC.............................................................................................................................................................................23180.061001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTGTTC............................................................................................................................................................................21180.061000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................G-------------------------------------TTGCATCTCATA------------------------------------------------------------ATATCTGATAA..............24180.061000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCATA------------------------------------------------------------ATATCTGATAGTGT...........19180.061000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTCCT-----------------------C..................................................................................................................................................27180.061000000000000100000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TCTTCGAATGTTCTGTGTTCCC-----------------------C..................................................................................................................................................23180.061001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TCTTCGAATGTTCTGTGTTC............................................................................................................................................................................20180.061000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................A------------------------------------------------------------ATATCTGATAGTGTTGAA.......19190.051000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TA------------------------------------------------------------ATATCTGATAGTGTTGAAC......21190.051000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATATCTGATAGTGTTGAAT......19190.051000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................TAAGTAGTTCTTCGAATGTTCTGTG...............................................................................................................................................................................25190.051000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................TTAAGTAGTTCTTCGAATGTTCTGTG...............................................................................................................................................................................26190.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAA......................................................................................................................................................................................................................................................25200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................GTCTAATGG-TCTCTTGTTAGT.............................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
............................................................................................................TCTTGTTAGTTGTCGAGTGTATA................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................TTCGAATGTTCTGTGTTCC...........................................................................................................................................................................19200.051000010000000000000000000000000000000000000000000000000000000000
......................................................................................................TGG-TCTCTTGTTAGTTGTCGAGTGTC..................................................................................................................................................................................................................................................26200.051000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................TAGTTGTCGAGTGTATAGTGT............................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAGAAA...................................................................................................................................................................................................................................................28200.051000000000001000000000000000000000000000000000000000000000000000
.......................................................................................................GG-TCTCTTGTTAGTTGTCGA.......................................................................................................................................................................................................................................................20200.051000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................T-----------------------GT-TTTCTTTT-G-------------------------------------TTGCATCTCA.......................................................................................22200.051000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................GTCGAGTGTATAGTGTAGTT........................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................TCTAATGG-TCTCTTGTTAGTT............................................................................................................................................................................................................................................................21200.051000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................TCTCTTGTTAGTTGTCGAGTGTA..................................................................................................................................................................................................................................................23200.051000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................TCTTCGAATGTTCTGTGT..............................................................................................................................................................................18200.051000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................CTCTTGTTAGTTGTCGAGTGT...................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................TTCGAATGTTCTGTGTTCCT-----------------------G..................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TATTGATTTGTTAAGTAGTTCTTCGAA........................................................................................................................................................................................27200.051000010000000000000000000000000000000000000000000000000000000000
.................................................................................................TCTAATGG-TCTCTTGTTAGTC............................................................................................................................................................................................................................................................21200.051000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................TTAGTTGTCGAGTGTATAGTGTAGTT........................................................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................AATGG-TCTCTTGTTAGTTGTCGAGTT....................................................................................................................................................................................................................................................26200.051000001000000000000000000000000000000000000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAGA.....................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................TTCGAATGTTCTGTGTTCCT-----------------------GT-................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TGTTAGTTGTCGAGTGTATA................................................................................................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
......................................................................................................TGG-TCTCTTGTTAGTTGTCGAGTGTATA................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000000100000000000000000000000
............................................................................................................TCTTGTTAGTTGTCGAGTGTATAGT..............................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................TGG-TCTCTTGTTAGTTGTCGA.......................................................................................................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCGAGAA....................................................................................................................................................................................................................................................27200.051000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................TGTTAGTTGTCGAGTGTATAGTGTAG..........................................................................................................................................................................................................................................26200.051000000000000000000000000000000100000000000000000000000000000000
............................................................................................................TCTTGTTAGTTGTCGAGTGTATAGTC.............................................................................................................................................................................................................................................26200.051000001000000000000000000000000000000000000000000000000000000000
...........................................................................................................CTCTTGTTAGTTGTCC........................................................................................................................................................................................................................................................16200.051000000000000000000000000000000000000000000000000000000000000001
.................................................................................................TCTAATGG-TCTCTTGTTAGTTGTCGAG......................................................................................................................................................................................................................................................27200.051000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................TTAGTTGTCGAGTGTATAGTGT............................................................................................................................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................TTCTTCGAATGTTCTGTG...............................................................................................................................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................TTGTTAGTTGTCGAGTGTATAGTG.............................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
............................................................................................................TCTTGTTAGTTGTCGAGTGTATAGTG.............................................................................................................................................................................................................................................26200.051000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................TGTCGAGTGTATAGTGTAGTTC------------...........................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................TAATGG-TCTCTTGTTAGTTGTCT........................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000001000000000000000000000000
........................................................................................................G-TCTCTTGTTAGTTGTCGAG......................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGT................................................................................................................................................................................20200.051000000000000000000000000000000001000000000000000000000000000000
............................................................................................................TCTTGTTAGTTGTCGAGTGTA..................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAGTTCTTCGAATGTTCTGTGTTT............................................................................................................................................................................24200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................TTCGAATGTTCTGTGTTCCT-----------------------GT-T...............................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................TCTTGTTAGTTGTCGAGTGTATAG...............................................................................................................................................................................................................................................24200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
TAT---------------------------------------------------------------------------------------------ATCTGCTGG-TTTTTGTTTTGTAACAGAATGTACAGTGTTATTG------------TATCGATCTACCGAAATATTTACTAATTCCTTAAATGAGTATTTTGAAT-----------------------TT-TGTTGCTT-T-------------------------------------AAGCATCTAAAT------------------------------------------------------------ATTTCCAAAAAGGTTGAATGAAATCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..T---------------------------------------------------------------------------------------------ATCTGCTGG-TTTTTGTTTTG..............................................................................................................................................................................................................................................................2120.501100000
................................................................................................................TTTTGTAACAGAATGTACAGT..............................................................................................................................................................................................................................................2120.501000001
...................................................................................................................................GTGTTATTG------------TATCGATCTACC...............................................................................................................................................................................................................2120.501100000
..................................................................................................................TTGTAACAGAATGTACAGTGTT...........................................................................................................................................................................................................................................2220.501000001
droGri2
ATCTCTGACTCTG-------ATTC------------T-TT-----TTCGTTCAATTTTTGGTGGTCGAAAAATA---------------------TGTCTATTGG-TTTTGCACTTACTGTGGAATGTAAAGATTGGTTG------------TATAATTGAATGGATTTAAATATTGAGTCTTCAAAAT-TCGATATTCCT-----------------------TC-AT-----------------------------------------------CCTTCGGTTA--------------------------------------------ATTTTGGT--TAGTTTGTTTCGGTTTATTTTGAATGAAATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................TGTAAAGATTGGTTG------------TATAATTGAAT................................................................................................................................................................................................................2612.00202
..........................................................................................................................................................................................AAT-TCGATATTCCT-----------------------TC-AT-----------------------------------------------CCTTCGGT.......................................................................................2611.00110
......GACTCTG-------ATTC------------T-TT-----TTCGTTCAATT...........................................................................................................................................................................................................................................................................................................................2511.00110
.....................TTC------------T-TT-----TTCGTTCAATTTTTGGTGGTC.................................................................................................................................................................................................................................................................................................................2711.00110
....................................................................................................................................ATTGGTTG------------TATAATTGAATGGATT...........................................................................................................................................................................................................2411.00110
.......................................................................................................................GTGGAATGTAAAGATTGGTT........................................................................................................................................................................................................................................2011.00110
....................................................................................................................................................................................................TTCCT-----------------------TC-AT-----------------------------------------------CCTTCGGTTA--------------------------------------------ATTTTGGT--...............................2711.00101
............................................................................................................................................................................................T-TCGATATTCCT-----------------------TC-AT-----------------------------------------------CCTTCGGTT......................................................................................2511.00110
...................................................................................................................................................................................TCTTCAAAAT-TCGATATTCCT-----------------------TC-AT-----------------------------------------------C..............................................................................................2611.00110
dp5
TCT-------------------------------------------------------------------------------------------------AGTGG-TCTTTTGTTTGTTACCGAATGTACAGAGTAATTG------------TATTCATAAATTGCCCTATCCAATAATTCCTCAAATGTCCGATGTTCCT-----------------------GC-ATTGTTAT-T-------------------------------------ATGCATCTCATG------------------------------------------------------------ATCTCCGAAAGGGTAGAGTGGAATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................TCTCATG------------------------------------------------------------ATCTCCGAAAGGGTAGA........2420.5010000000010
...................................................................................................................................................................................................................................................................................TGCATCTCATG------------------------------------------------------------ATCTCCGAAAGGGT...........2520.5010100000000
............................................................................................................................................................................................................................................T-------------------------------------ATGCATCTCATG------------------------------------------------------------ATCTCCGAAAGGGT...........2720.5010100000000
.......................................................................................................................ACCGAATGTACAGAGTAATTG------------T..........................................................................................................................................................................................................................2220.5010100000000
...................................................................................................................................................................................................................................................................................TGCATCTCATG------------------------------------------------------------ATCTCCGAAAGGG............2420.5010100000000
droPer2
TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTT-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATTTCGGTCAGGGTGCTATGAAAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTT-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATT......................2433.009090000
..........................................................................................................................................................................................................................................T-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATTTCGGTCAGGG............2732.006060000
TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTT-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATTTCGG..................2830.331010000
..........................................................................................................................................................................................................................................T-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATTTCGGTCAGG.............2630.331010000
............................................................................................................................................................................................................................................G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATTTCGGTCAGGG............2630.331010000
..........................................................................................................................................................................................................................................T-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATTTCGGTCA...............2430.331010000
..................................................................................................................................................................................................................................................................................AGGCATCTCGCA------------------------------------------------------------ATTTCGGTCAGGG............2530.331010000
.C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTT-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATT......................2330.331010000
..........................................................................................................................................................................................................................................................................................CGCA------------------------------------------------------------ATTTCGGTCAGGGTGCTATG.....2430.331010000
TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTT-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------AT.......................2330.331010000
.......................................................................................................................................................................................................................................................................................TCTCGCA------------------------------------------------------------ATTTCGGTCAGGGTG..........2230.331000001
.....................................................................................................................................................................................................................................TAGTTT-G-------------------------------------AGGCATCTCGCA------------------------------------------------------------ATTTCGG..................2630.331010000
droAna3
GTTTCTGGAT------------TTGCAGGTACATTT-CTCCCAAA-----------------------AAAATA---------------------TAT------G-TTTTTTTGCAGCCACTCAATGTACTGTGGAATTA------------ATCTTATAAATGGATCTGTCTAATAGTTCCTCGAAAGTTCTTAGCTCCT-----------------------GT-TTAGCTTG-G-------------------------------------GGACAACGAATG------------------------------------------------------------ATCTCTGAAAGTGGCGAATGAAATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................TCCT-----------------------GT-TTAGCTTG-G-------------------------------------GGACAACGA........................................................................................2411.001100000
droBip1
GT----------------------------------------------------------------------------------------------------------------------------GAAGGGTTCTATTG------------TATTCTATAGACGCGAGTAGCATTAATTCAACCGTGTCCTCA-ATACCT-----------------------CTTTCGATTTT-T-------------------------------------AAGCACCGTGCA------------------------------------------------------------ATTTCTGTTAGTGTACTGTGGAATCSizeHit CountTotal NormTotal
No Reads
droKik1
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTTT-A-------------------------------------TGACACCTAATA------------------------------------------------------------ATTTCTGATAATGTTGAATGAAAACSizeHit CountTotal NormTotal
No Reads
droFic1
TG----------------------------------------------------------------------------------------------------------------------------------AATGGTTA------------TATTCTTTCACCGCTTTGAAAATCAAGTCTTCGAAAGTGGCTGTAGCTT-----------------------CG-TCTCGTTT-G-------------------------------------AGACATCTTAAA------------------------------------------------------------ATTTCGGACATTGTTGAATGAAATCSizeHit CountTotal NormTotal
No Reads
droEle1
ATTTTCTTTTTTA-------TTT--------------CTTCTCGT-----------------------GTTTTTTATGTCTTCT----------------GTT------GAACTTTGTTACAGAATGTATGGATTTATTA------------TATTCCTGAACGGCTTTAAAGATTAAATCCTCAAATGATATGCTCCCTT-----------------------TG-TCTTTTTT-G-------------------------------------AGACACCGCATG------------------------------------------------------------ATTTCAAATAGGGTTACATGAAACCSizeHit CountTotal NormTotal
No Reads
droRho1
T----------------------------------------------------------------------------------------------------------------------ACTGAATGTATTGTGTAATTG------------TATTCGTAAATGGCTCTGTCTAATAATTCTTCAAAGGTGTTGTATATTT-----------------------GT-TTGGTTTTAA-------------------------------------AGGCATCTCATT------------------------------------------------------------ATTTCCGAAAGGGTCGAATGAAATCSizeHit CountTotal NormTotal
No Reads
droBia1
G----------------------------------------------------------------------------------------------------------------------------TGGATTGTGTAATTA------------TATTCGTAAACGGCTCTATTTAATAGTTCTTCAAAAGTATTGTAAAAAT-----------------------GT-TTTGTCTT-A-------------------------------------ATGCATCGCATT------------------------------------------------------------ATTTCAGACAGAGTGGAATGAAACCSizeHit CountTotal NormTotal
No Reads
droTak1
TTCTGTTTTTGTTGTTCTAGGGTC------------T-GC-----TTCCTATAATTTGTGAGG---------------------------------CCCTGATAA-TTTATTGATTGTCGTTGAATGGAATGAATTGTTA------------TACTTGTCCACCGCGATGAAAGCCAACTCAATCGGTTTTAGTTTGGGGT-----------------------GG-TCATTTCT-T-------------------------------------AAGCACCTGTAT------------------------------------------------------------ATTGTAATGAAGGTTGAGTGGAATCSizeHit CountTotal NormTotal
No Reads
droEug1
TTTATT----------CTAGAAGT---------------------------------------------------------TCGGTTGAAAAAATTGTCAACGGATTTTTTTATTTGTCACCGAGTGGACAGAGTTATTG------------TATCTGTCTACAACCATTGAGATAAGCTCGTTTGGTTTAAAGGTGGGAT-----------------------AT-TCGCCTTT-C-------------------------------------AAGCATCGATAT------------------------------------------------------------ATTTCCATGAAGGTAGAATGGAATCSizeHit CountTotal NormTotal
No Reads
dm3
G----------------------------------------------------------------------------------------------------------------------------TGAATGGAGTTATTG------------TATTTAATTATAGATCTGCCTATAAGATCTCTTATGGAACTATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCACTTAAGGTTGAATGGAAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................TATAAGATCTCTTATGGAACTATGGAGT...........................................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000200000000000000000000000000
............................................................................................................................................................................TATAAGATCTCTTATGGAACTATGGA.............................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002020100000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TAAGATCTCTTATGGAACTATGGAGT...........................................................................................................................................................................2617.0070000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000003000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................GAACTATGGAGTT-----------------------TT-TCTGCCT.........................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTTATGGAACTATGGAGTT-----------------------T..................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000012000000000000000000000000000000000
.....................................................................................................................................................................................TCTTATGGAACTATGGAGTT-----------------------TT-TC..............................................................................................................................................2414.0040000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................AAGATCTCTTATGGAACTATGGAGTT-----------------------...................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TATAAGATCTCTTATGGAACTATGGAG............................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................TATGGAACTATGGAGTT-----------------------TT-TC..............................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000
.................................................................................................................................TGGAGTTATTG------------TATTTAATTA.................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
.................................................................................................................................TGGAGTTATTG------------TATTTAATT..................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TTTCACTTAAGGTTGAATG.....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................ATAAGATCTCTTATGGAACT..................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGGAACTATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------.................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TAAGATCTCTTATGGAACTATGGA.............................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TAAGATCTCTTATGGAACTATGGAG............................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................TTG------------TATTTAATTATAGATCTGCCTA.....................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TATGGAACTATGGAGTT-----------------------TT-TCTGCCTT-.......................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTTATGGAACTATGGAGTT-----------------------TT-................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................TATAAGATCTCTTATGGAACT..................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TCTCTTATGGAACTATGGAGTT-----------------------TT-TC..............................................................................................................................................2612.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TGAATGGAGTTATTG------------TATTT......................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
...................................................................................................................................................................................TCTCTTATGGAACTATGGAGT...........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTATGGAACTATGGAGTT-----------------------TT-T...............................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CATG------------------------------------------------------------ATTTCACTTAAGGTTGA........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGGAACTATGGAGTT-----------------------TT-TCTGCCTT-.......................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TGACATCTCATG------------------------------------------------------------ATTTCACTTAAGGT...........2611.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................ACATCTCATG------------------------------------------------------------ATTTCACTTA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TATGGAACTATGGAGTT-----------------------TT-T...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................ACTATGGAGTT-----------------------TT-TCTGCCTT-.......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TAAGATCTCTTATGGAACTATG...............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCACT.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGGAGTTATTG------------TATTTAATTATAGATC...........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................TATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------TGACATC..........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AGATCTCTTATGGAACTATGGATC...........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TATGGAACTATGGAGTT-----------------------TT-TCTGCCT.........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TCATG------------------------------------------------------------ATTTCACTTAAGGTTG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TATGGAACTATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------.................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TATAAGATCTCTTATGGAACTA.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TTTCACTTAAGGTTGAATGGA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TGAATGGAGTTATTG------------TATTTAATTA.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TATTG------------TATTTAATTATAGATCTGCC.......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCAC..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TATTTAATTATAGATCTGCCT......................................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000
.............................................................................................................................TGAATGGAGTTATTG------------TATTTA.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................TT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCACTTAAGG............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TGAATGGAGTTATTG------------TATTTAATTAA................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTTATGGAACTATGGAGTT-----------------------TT-TCTGCC..........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TTATGGAACTATGGAGTT-----------------------TT-TCTG............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................CTTATGGAACTATGGAGT...........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................ATCTCTTATGGAACTATGGAG............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTTATGGAACTATGGAGTT-----------------------TT-TCTGC...........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................TCTTATGGAACTATGGAGTT-----------------------TT-................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TATGGAACTATGGAGTT-----------------------TT-TCTGCC..........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATTTCACTTAAGGTTGAATGG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCTGCCTATAAGATCTCTTATGGAAC...................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCTTATGGAACTATGGAGTT-----------------------TT-TCT.............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AGTTATTG------------TATTTAATTATAG..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GACATCTCATG------------------------------------------------------------ATTTCACTTAAGGTT..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TGGAACTATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------T................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TATGGAACTATGGAGTT-----------------------TT-TT..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCACTA................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CTCATG------------------------------------------------------------ATTTCACTTAAGGTT..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTCACTTAAGGTTGAATGGA...2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
G----------------------------------------------------------------------------------------------------------------------------TGAATGGAGTTATTG------------TATTT......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TCTCATG------------------------------------------------------------ATTTCACTTAAGGT...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................TATGGAACTATGGAGTT-----------------------TT-TCTGC...........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CTTATGGAACTATGGAGTT-----------------------T..................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................T-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------AT.......................2421.0020000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................T-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTC....................2721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TT-----------------------TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------A........................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------A........................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................T-----------------------TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------AT.......................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCA...................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................T-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATT......................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TTATAGATCTGCCTATAAGATC..............................................................................................................................................................................................2240.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATT......................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGCCTATAAGATCTCTTATG.......................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TATTTAATTATAGATCTGCCTATAAGA................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GATCTGCCTATAAGATCTCTT..........................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAGTTG------------TATTCGTAGACAGCTGAATCTAATAGTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAAACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAATAGTTC..............................................................................................................................................................................................2713210.003210010290016641499247040000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................2511302.0013020006005813501123030634000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAATAGT................................................................................................................................................................................................2511243.0012430016007094881433010000
...........................................................................................................................................................TCGTAGACAGCTGAATCTAATAGTTC..............................................................................................................................................................................................261893.0089302013004653940117010000
..................................................................................................................................................................................TTCTTCAAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................261795.00795000320242149005033658000
......................................................................................................................TACAGAGTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................241658.0065800032030230202340130000
.................................................................................................................................TTGTGAAGTTG------------TATTCGTAGACAGC.............................................................................................................................................................................................................251557.005570106002402600045041000
.............................................................................................................................TGAATTGTGAAGTTG------------TATTCGTAGACAGC.............................................................................................................................................................................................................291539.00539000100243292110001000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGT...........................................................................................................................................271488.004880018001681160034014615000
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................281415.004150004002221771011000000
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGA............................................................................................................................................................................................................................................251356.003560003001551651032000000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAATAG.................................................................................................................................................................................................241352.00352000000188158014010000
.TT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................271342.003420004001891300019000000
.........................................................................................................................................................................................................................................TT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGG............281314.00314000200151160001000000
..T--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................261296.002960001001541090131000000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAATAGTT...............................................................................................................................................................................................261268.00268000400148107135000000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................231264.0026400010011885002102910000
.................................................................................................................TTCGTTACAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................251263.002630001120864502117000000
.................................................................................................................TTCGTTACAGAGTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................291231.0023100030014979000000000
............................................................................................................................................................................................................................................................................................TA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAAAC.261221.00221000600768101450111000
..................................................................................................................................TGTGAAGTTG------------TATTCGTAGACAGC.............................................................................................................................................................................................................241214.0021401070097940014010000
............................................................................................................................................................................................................................................T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGG............261201.002010003009399006000000
............................................................................................................................................................CGTAGACAGCTGAATCTAATAGTTC..............................................................................................................................................................................................251194.0019400010010382107000000
........................................................................................................................................................TATTCGTAGACAGCTGAATCTAATAGTTC..............................................................................................................................................................................................291188.001880000009791000000000
..........................................................................................................................................................................................................................................T-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGG............271185.001850000009879008000000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGTT..........................................................................................................................................281182.0018200020072840020148000
..................................................................................................................................................................................TTCTTCAAAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................251180.0018000032084002013328000
........................................................................................................................................................TATTCGTAGACAGCTGAATCTAATAGT................................................................................................................................................................................................271155.0015500010056830013020000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................241151.00151000000157000011712000
........................................................................................................................................................................................................................................TTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGG............291143.001430000008954000000000
..................................................................................................................TCGTTACAGAGTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................281142.001420003006870001000000
................................................................................................................................ATTGTGAAGTTG------------TATTCGTAGACAGC.............................................................................................................................................................................................................261137.0013700030060590014010000
........................................................................................................................................................TATTCGTAGACAGCTGAATCTAATAG.................................................................................................................................................................................................261135.001350000006667002000000
..................................................................................................................................TGTGAAGTTG------------TATTCGTAGACAGCTGAA.........................................................................................................................................................................................................281129.0012900000034600031040000
..T--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGA............................................................................................................................................................................................................................................231105.0010500010042430019000000
.TT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGA............................................................................................................................................................................................................................................241101.001010000006134006000000
......................................................................................................................................................................................TCAAAAGTTCGGTGTACCT-----------------------GT-TTAGT...........................................................................................................................................26184.008400030030220060194000
.............................................................................................................................TGAATTGTGAAGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................27183.00830002005028002010000
.................................................................................................................TTCGTTACAGAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................26179.007900000035170027000000
.......................................................................................................................ACAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................19170.0070000000000070000000
........................................................................................................................................................................................................................................TTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGG.............28168.00680000003631001000000
......................................................................................................................................................................................TCAAAAGTTCGGTGTACCT-----------------------GT-TTAGTT..........................................................................................................................................27165.006500000025150040183000
..................................................................................................................................TGTGAAGTTG------------TATTCGTAGACAGCTGA..........................................................................................................................................................................................................27159.005900030020120021021000
.................................................................................................................TTCGTTACAGAGTGAATTGTGAAGTTG------------T..........................................................................................................................................................................................................................28158.00580002002822006000000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-TTAG............................................................................................................................................26158.00580000001790020282000
...........................................................................................................................................................TCGTAGACAGCTGAATCTAATAGTTCT.............................................................................................................................................................................................27157.00570000002135001000000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAATAGTTCT.............................................................................................................................................................................................28157.00570000002333010000000
.........................................................................................................................................................................................................................................................................................TCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAAAC.29155.00550000003619000000000
.....................................................................................................................TTACAGAGTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................25155.00550000002626021000000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGT...........................................................................................................................................29154.00540000002717000046000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-TT..............................................................................................................................................26151.0051000120120000432000
....................................................................................................................GTTACAGAGTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................26149.00490000002622001000000
.............................................................................................................................TGAATTGTGAAGTTG------------TATTCGTAGAC................................................................................................................................................................................................................26149.004900010016140020133000
.........................................................................................................................................................................................................................................TT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGG.............27147.00470000001828001000000
.........................................................................................................................................................................................................................................TT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAG..............26146.00460001002317005000000
..................................................................................................................TCGTTACAGAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................25146.0046000000780024061000
........................................................................................................................................................................................................................................TTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAG..............27142.00420004001915003010000
......................................................................................................................TACAGAGTGAATTGTGAAGTTG------------TATT.......................................................................................................................................................................................................................26141.0041000400100027081000
.............................................................................................................................................................................................TTCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGC.............................................................................................27141.00410004001510001092000
.............................................................................................................................TGAATTGTGAAGTTG------------TATTCGTAGACAG..............................................................................................................................................................................................................28139.00390000002117000010000
.........................................................................................................................................................ATTCGTAGACAGCTGAATCTAATAGTTC..............................................................................................................................................................................................28138.00380000001523000000000
.......................................................................................................................ACAGAGTGAATTGTGAAGTTG------------TATT.......................................................................................................................................................................................................................25137.0037000300310030000000
................................................................................................................................................................................AGTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................27136.0036000200100060252000
..........................................................................................................................................................................................................................................T-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGG.............26133.00330000001517010000000
...........................................................................................................................................G------------TATTCGTAGACAGCTGAATCTAATAG.................................................................................................................................................................................................27132.00320000001913000000000
...............................................................................................................................AATTGTGAAGTTG------------TATTCGTAGACAGC.............................................................................................................................................................................................................27131.00310000001512001030000
..............................................................................................................................GAATTGTGAAGTTG------------TATTCGTAGACAGC.............................................................................................................................................................................................................28131.00310000001318000000000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................22129.0029000000820050122000
..........................................................................................................................................................................TCTAATAGTTCTTCAAAAGTTCGGTG...............................................................................................................................................................................26128.0028000000166015000000
........................................................................................................................................................TATTCGTAGACAGCTGAATCTAATAGTT...............................................................................................................................................................................................28128.00280000001117000000000
.......................................................................................................................................................................................................................................................................................TCTCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAA.......25128.00280002001012002020000
.................................................................................................................TTCGTTACAGAGTGAATTGTGA............................................................................................................................................................................................................................................22128.0028000020148004000000
..........................................................................................................................................................................TCTAATAGTTCTTCAAAAGTTCGGTGTA.............................................................................................................................................................................28127.00270000001214001000000
..........................................................................................................................GAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................16126.0026000000120023000000
............................................................................................................................................................................TAATAGTTCTTCAAAAGTTCGGTGTA.............................................................................................................................................................................26126.0026000100139003000000
......................................................................................................................TACAGAGTGAATTGTGAAGTTG------------TAT........................................................................................................................................................................................................................25126.0026000020120018021000
.................................................................................................................................TTGTGAAGTTG------------TATTCGTAGACAG..............................................................................................................................................................................................................24126.0026000000128015000000
............................................................................................................................................................................................................................................T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGG.............25125.00250000001211002000000
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................29123.0023000000149000000000
.........................................................................................................................................................................................................................................................................................TCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGA....26122.0022000000511006000000
................................................................................................................................................................................AGTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................28121.002100010021002096000
.............................................................................................................................TGAATTGTGAAGTTG------------TATTCGTAGA.................................................................................................................................................................................................................25121.002100020058005010000
..........................................................................................................................................................................................................................................T-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAG..............25121.002100000096006000000
....................................................................................................................................................................................................................................TAGTTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTC....................25120.0020000100100016020000
..............................................................................................................................................................................................TCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCA............................................................................................27120.002000020024001092000
...........................................................................................................................................................TCGTAGACAGCTGAATCTAATAGTT...............................................................................................................................................................................................25120.0020000100135001000000
..................................................................................................................................................................................TTCTTCAAAAGTTCGGTGTACCT-----------------------GT-TT..............................................................................................................................................27120.0020000000110000144000
......................................................................................................................................................................................TCAAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................22119.001900000055008001000
......................................................................................................................TACAGAGTGAATTGTGAAGTTG------------TATTCGTA...................................................................................................................................................................................................................30118.0018000000135000000000
.........................................................................................................................................................................................................................................................................................TCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATG.....25118.0018000000414000000000
...................................................................................................................CGTTACAGAGTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................27118.0018000100211013000000
.........................................................................................................................................................ATTCGTAGACAGCTGAATCTAATAGT................................................................................................................................................................................................26117.001700000095003000000
.TT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................28117.001700000097001000000
..T--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................27117.0017000200105000000000
..................................................................................................................TCGTTACAGAGTGAATTGTGAAGTTG------------T..........................................................................................................................................................................................................................27117.001700000068003000000
.........................................................................................................................................................................................................................................................................................TCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAA...27117.001700000067001030000
........................................................................................................................................................................................................................................TTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGA...............26116.001600000088000000000
.........................................................................................................................AGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................17116.0016000000020014000000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-TT..............................................................................................................................................24116.0016000000020000122000
........................................................................................................................................................................................AAAAGTTCGGTGTACCT-----------------------GT-TTAGTT..........................................................................................................................................25115.001500000051004041000
............................................................................................................................................................................................................................................T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAG..............24115.001500020065002000000
..................................................................................................................TCGTTACAGAGTGAATTGTGAAGTTG------------...........................................................................................................................................................................................................................26115.001500010021008030000
......................................................................................................................TACAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................20115.0015000000100014000000
...............................................................................................................................................................................TAGTTCTTCAAAAGTTCGGTGTACC...........................................................................................................................................................................25115.0015000300100011000000
..........................................................................................................................................................................................................................................................................................................................................................ATTTCAGCGAGGGTAGAATGAAAC.24115.001500000065004000000
...........................................................................................................................................................TCGTAGACAGCTGAATCTAATAGT................................................................................................................................................................................................24115.001500002093001000000
...........................................................................................................................................................................................................................................................................................ATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAAAC.27115.001500000067002000000
...........................................................................................................................................G------------TATTCGTAGACAGCTGAATCTAATAGT................................................................................................................................................................................................28114.001400000085001000000
......................................................................................................................................................................................TCAAAAGTTCGGTGTACCT-----------------------GT-TTAG............................................................................................................................................25114.001400000022001072000
..............................................................................................................................................................................................TCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCATC..........................................................................................29114.001400020056000001000
..........................................................................................................................................TG------------TATTCGTAGACAGCTGAATCTAA....................................................................................................................................................................................................25114.001400000010024052000
.................................................................................................................TTCGTTACAGAGTGAATTGTGAAGTTG------------...........................................................................................................................................................................................................................27114.001400020043005000000
.......................................................................................................................ACAGAGTGAATTGTGAAGTTG------------TATTCGTA...................................................................................................................................................................................................................29113.0013000000112000000000
.................................................................................................................................................................................GTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................26113.001300000000002083000
.......................................................................................................................................................................................................................................................................................TCTCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATG.....27113.001300000075010000000
.......................................................................................................................ACAGAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................20112.0012000000000012000000
.................................................................................................................TTCGTTACAGAGTGAATT................................................................................................................................................................................................................................................18112.0012000000000012000000
..................................................................................................................TCGTTACAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................24112.001200000063003000000
....................................................................................................................................................................................CTTCAAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................24112.001200020044000020000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGTT..........................................................................................................................................30112.001200000093000000000
.......................................................................................................................................................................................................................................TTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGG............30112.001200000084000000000
.......................................................................................................................ACAGAGTGAATTGTGAAGTTG------------TAT........................................................................................................................................................................................................................24111.001100010001001071000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAATA..................................................................................................................................................................................................23111.001100000063002000000
.............................................................................................................................................................GTAGACAGCTGAATCTAATAGTTC..............................................................................................................................................................................................24111.001100000064001000000
....................................................................................................................................................................GCTGAATCTAATAGT................................................................................................................................................................................................15111.0011000000100010000000
............................................................................................................................................................CGTAGACAGCTGAATCTAATAGTTCT.............................................................................................................................................................................................26111.001100000055001000000
........................................................................................................................................................................................AAAAGTTCGGTGTACCT-----------------------GT-TTAGT...........................................................................................................................................24111.001100000030002060000
..................................................................................................................................TGTGAAGTTG------------TATTCGTAGACAG..............................................................................................................................................................................................................23111.001100000047000000000
.......................................................................................................................................................................................CAAAAGTTCGGTGTACCT-----------------------GT-TTAGTT..........................................................................................................................................26111.001100000032002040000
.......................................................................................................................................................................................................................................................................................TCTCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGA....28111.001100000073000010000
.......................................................................................................................................................................................................................................................................................TCTCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAA...29111.001100010055000000000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAA....................................................................................................................................................................................................21111.001100000064001000000
.......................................................................................................................................AGTTG------------TATTCGTAGACAGCT............................................................................................................................................................................................................20110.0010000000000010000000
...............................................................................................................................................................................TAGTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................29110.001000000062001001000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-TTA.............................................................................................................................................25110.001000000020002042000
.................................................................................................................................................................................GTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................27110.001000000000002062000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTA.....................................................................................................................................................................................................20110.001001000051003000000
.......................................................................................................................................AGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................17110.0010000000000010000000
...............................................................................................................................................................................TAGTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................28110.001000000020003050000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGTTT.........................................................................................................................................29110.001000000064000000000
........................................................................................................................................................................................AAAAGTTCGGTGTACCT-----------------------GT-TTAGTTT.........................................................................................................................................2619.00900000000003060000
.......................................................................................................................................................................................CAAAAGTTCGGTGTACCT-----------------------GT-TTAGT...........................................................................................................................................2519.00900000023000040000
.............................................................................................................................................................................................TTCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------A................................................................................................2419.00900000023001021000
.......................................................................................................................ACAGAGTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................2319.00900000033001020000
....................................................................................................................................................................................................................................TAGTTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATT......................2319.00900010023001020000
........................................................................................................................CAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................1819.00900000000009000000
..........................................................................................................................................TG------------TATTCGTAGACAGCTGAATCTAAT...................................................................................................................................................................................................2619.00900000031000050000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTA.............................................................................................................................................2718.00800000010000052000
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAA...........................................................................................................................................................................................................................................2618.00800000062000000000
........................................................................................................................................................................................AAAAGTTCGGTGTACCT-----------------------GT-TTAGTTTT-.......................................................................................................................................2718.00800000003002021000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-A...............................................................................................................................................2518.00800000011000051000
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAG..........................................................................................................................................................................................................................................2718.00800000052001000000
................................................................................................................................ATTGTGAAGTTG------------TATTCGTAGACAG..............................................................................................................................................................................................................2518.00800000032003000000
.............................................................................................................................................................................................TTCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCA............................................................................................2818.00800000032001020000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTAG............................................................................................................................................2818.00800000002000042000
..........................................................................................................................................TG------------TATTCGTAGACAGCTGAATCTAATAG.................................................................................................................................................................................................2818.00800000044000000000
..........................................................................................................................GAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................1718.00800000010007000000
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAAT.................................................................................................................................................................................................................................................2017.00700000000007000000
.............................................................................................................................TGAATTGTGAAGTTG------------TAT........................................................................................................................................................................................................................1817.00700000033000010000
......................................................................................................................................................................................TCAAAAGTTCGGTGTACCT-----------------------GT-TTAGTTT.........................................................................................................................................2817.00700000041000020000
...............................................................................................................................................................................TAGTTCTTCAAAAGTTCGGTGTACCT-----------------------G..................................................................................................................................................2717.00700000000002050000
..............................................................................................................................................................................................TCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGC.............................................................................................2617.00700010021001020000
............................................................................................................................................................................................................................................T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGGT...........2717.00700020000005000000
............................................................................................................................................................................................................................................................................................TA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAAA..2517.00700010022001010000
..................................................................................................................................TGTGAAGTTG------------TATTCGTAGACAGCT............................................................................................................................................................................................................2517.00700000032002000000
.........................................................................................................................................................ATTCGTAGACAGCTGAATCTAATAG.................................................................................................................................................................................................2517.00700000041011000000
............................................................................................................................GTGAATTGTGAAGTT........................................................................................................................................................................................................................................1517.00700000000007000000
..........................................................................................................................................................................TCTAATAGTTCTTCAAAAGTTCGGTGT..............................................................................................................................................................................2717.00700000010006000000
.................................................................................................................TTCGTTACAGAGTGAAT.................................................................................................................................................................................................................................................1717.00700000000007000000
........................................................................................................................................................................................................................................TTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGC.................2417.00700030022000000000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------G..................................................................................................................................................2317.00700000000000070000
............................................................................................................................GTGAATTGTGAAGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................2817.00700000043000000000
........................................................................................................................................................................................AAAAGTTCGGTGTACCT-----------------------GT-T...............................................................................................................................................2016.00600000000006000000
..................................................................................................................................................................................................................................................................................................................................................................GAGGGTAGAATGAAAC.1616.00600000000006000000
..........................................................................................................................................TG------------TATTCGTAGACAGCTGAATCTAAA...................................................................................................................................................................................................2616.00600000000000051000
..................................................................................................................................TGTGAAGTTG------------TATTCGTAGACAGCTGAATC.......................................................................................................................................................................................................3016.00600000051000000000
.................................................................................................................................TTGTGAAGTTG------------TATTCGTAGACAGCA............................................................................................................................................................................................................2616.00600000000000060000
.................................................................................................................................TTGTGAAGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................2316.00600000051000000000
..................................................................................................................................TGTGAAGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................2216.00600000011004000000
....................................................................................................................................TGAAGTTG------------TATTCGTAGACAGCTGAA.........................................................................................................................................................................................................2616.00600000011001030000
............................................................................................................................GTGAATTGTGAAGTTG------------TATTCGTAGA.................................................................................................................................................................................................................2616.00600000032001000000
..T--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAAT.................................................................................................................................................................................................................................................1816.00600000000006000000
.........................................................................................................................................................................................................................................TT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGA...............2516.00600000033000000000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACC...........................................................................................................................................................................1916.00600000000006000000
...................................................................................................................................................................AGCTGAATCTAATAGT................................................................................................................................................................................................1616.00600000000006000000
..........................................................................................................................GAGTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................2016.00600000000006000000
............................................................................................................................GTGAATTGTGAAGTTG------------TATTCGTAGACAGC.............................................................................................................................................................................................................3016.00600000024000000000
....................................................................................................................................................................................CTTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGT...........................................................................................................................................2816.00600000022001010000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------GT-TTAA............................................................................................................................................2616.00600000000000060000
..............................................................................................................................................................................................TCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCAA...........................................................................................2816.00600000010000050000
..........................................................................................................................................TG------------TATTCGTAGACAGCTGAATCTA.....................................................................................................................................................................................................2416.00600000022000020000
.................................................................................................................................TTGTGAAGTTG------------TATTCGTA...................................................................................................................................................................................................................1916.00600002000004000000
.............................................................................................................................................................................................................................................................................................................................................................TCAGCGAGGGTAGAATG.....1715.00500000001004000000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTA.............................................................................................................................................................................1715.00500000000005000000
.TT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAAT.................................................................................................................................................................................................................................................1915.00500000000005000000
..T--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAG..........................................................................................................................................................................................................................................2515.00500000041000000000
.TT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAAG..........................................................................................................................................................................................................................................2615.00500000022001000000
..................................................................................................................................................................................TTCTTCAAAAGTTCGGTGTACCT-----------------------G..................................................................................................................................................2415.00500000001000040000
....................................................................................................................................TGAAGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................2015.00500002000003000000
...................................................................................................................................................................................................................................TTAGTTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATT......................2415.00500000023000000000
.............................................................................................................................................................................................................................................................................................................................................................TCAGCGAGGGTAGAATGAAAC.2115.00500000000004010000
..................................................................................................................................................................................TTCTTCAAAAGTTCGGTGTACCT-----------------------GT-TA..............................................................................................................................................2715.00500000000000041000
............................................................................................................................................................................................................................................................................................TA------------------------------------------------------------ATTTCAGCGAGGGT...........1615.00500000000005000000
.............................................................................................................................................................................................................................................................................................................................................................TCAGCGAGGGTAGAAT......1615.00500000000005000000
...........................................................................................................................................................TCGTAGACAGCTGAATCTAATAGTTCTT............................................................................................................................................................................................2815.00500000040000010000
.........................................................................................................................................................ATTCGTAGACAGCTGAATCTAATAGTT...............................................................................................................................................................................................2715.00500000032000000000
........................................................................................................................CAGAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................1915.00500000000005000000
................................................................................................................................................................................................................................................................................................................................................................GCGAGGGTAGAATGAAAC.1815.00500000000005000000
........................................................................................................................................................................................AAAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................1915.00500000000004010000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------GT-TA..............................................................................................................................................2615.00500000000001040000
.....................................................................................................................................................................................TTCAAAAGTTCGGTGTACCT-----------------------...................................................................................................................................................2015.00500000000005000000
...................................................................................................................................................................................TCTTCAAAAGTTCGGTGTACCT-----------------------...................................................................................................................................................2215.00500000041000000000
............................................................................................................................................................................................................................................T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGGTAGA........3015.00500000032000000000
...................................................................................................................................................................................................................................................................................AGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGG............2415.00500000013001000000
........................................................................................................................................................TATTCGTAGACAGCTGAATCTAAT...................................................................................................................................................................................................2415.00500000012002000000
............................................................................................................................................................................TAATAGTTCTTCAAAAGTTCGGTGTACC...........................................................................................................................................................................2815.00500010011002000000
.TT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTGAA...........................................................................................................................................................................................................................................2515.00500010030001000000
............................................................................................................................................................................................................................................T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGGTA..........2815.00500000032000000000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAAT...................................................................................................................................................................................................2215.00500000022001000000
..................................................................................................................TCGTTACAGAGTGAATTGTGA............................................................................................................................................................................................................................................2115.00500000011003000000
.................................................................................................................TTCGTTACAGAGTGAATTGTGAAG..........................................................................................................................................................................................................................................2415.00500010012001000000
...............................................................................................................................AATTGTGAAGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................2515.00500000005000000000
.................................................................................................................TTCGTTACAGAGTGAATTGTGAA...........................................................................................................................................................................................................................................2314.00400002011000000000
.......................................................................................................................................................................................................................................TTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAG..............2814.00400000031000000000
................................................................................................................................ATTGTGAAGTTG------------TATT.......................................................................................................................................................................................................................1614.00400000000004000000
............................................................................................................................GTGAATTGTGAAGTTG------------...........................................................................................................................................................................................................................1614.00400000000004000000
...............................................................................................................................AATTGTGAAGTTG------------TATT.......................................................................................................................................................................................................................1714.00400000000004000000
................................................................................................................................................................GACAGCTGAATCTAATAGT................................................................................................................................................................................................1914.00400000000004000000
.............................................................................................................................TGAATTGTGAAGTTG------------TATTCGTA...................................................................................................................................................................................................................2314.00400000013000000000
......................................................................................................................................................................TGAATCTAATAGTTCTTCAAAAGTTCGG.................................................................................................................................................................................2814.00400010012000000000
.......................................................................................................................................AGTTG------------TATTCGTAGACAGCTGAATC.......................................................................................................................................................................................................2514.00400010000002010000
.....................................................................................................................................GAAGTTG------------TATTCGTAGACAGC.............................................................................................................................................................................................................2114.00400000000004000000
.TT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATT................................................................................................................................................................................................................................................2014.00400000000004000000
.........................................................................................................................................................................................................................................................................................TCATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAAA..2814.00400020011000000000
..................................................................................................................................................................................TTCTTCAAAAGTTCGGTGTACCT-----------------------GT-AA..............................................................................................................................................2714.00400000000000031000
................................................................................................................................................................................AGTTCTTCAAAAGTTCGGTGTACCT-----------------------G..................................................................................................................................................2614.00400000000001030000
....................................................................................................................GTTACAGAGTGAATTGTGA............................................................................................................................................................................................................................................1914.00400000000004000000
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATT................................................................................................................................................................................................................................................2114.00400000000004000000
....................................................................................................................................................................................................TACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCATCTCA.......................................................................................2614.00400022000000000000
..........................................................................................................................................................................................................................................................................................CATA------------------------------------------------------------ATTTCAGCGAGGGTAGAATGAAAC.2814.00400010012000000000
...................................................................................................................................GTGAAGTTG------------TATTCGTAGACAGCTGA..........................................................................................................................................................................................................2614.00400000001003000000
......................................................................................................................TACAGAGTGAATTGTGAAGTT........................................................................................................................................................................................................................................2114.00400000000004000000
..........................................................................................................................................................TTCGTAGACAGCTGAATCTAATAGTTCTT............................................................................................................................................................................................2914.00400000040000000000
........................................................................................................................................................................................AAAAGTTCGGTGTACCT-----------------------...................................................................................................................................................1714.00400000000004000000
.................................................................................................................................TTGTGAAGTTG------------TATTCGTAGACAGCT............................................................................................................................................................................................................2614.00400000022000000000
......................................................................................................................................................................TGAATCTAATAGTTCTTCAAAAGTT....................................................................................................................................................................................2514.00400000002002000000
...................................................................................................................................................................................................................................................................................AGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGGT...........2514.00400000000004000000
....................................................................................................................................TGAAGTTG------------TATTCGTAGACAGCTGA..........................................................................................................................................................................................................2514.00400000000001030000
...................................................................................................................................GTGAAGTTG------------TATTCGTAGACAGCTGAA.........................................................................................................................................................................................................2714.00400000020000020000
............................................................................................................................................................................................................................................................................................................................................................TTCAGCGAGGGTAGAATG.....1814.00400000000004000000
.................................................................................................................................TTGTGAAGTTG------------TATTCGTAGACAGCTGA..........................................................................................................................................................................................................2813.00300000011001000000
...........................................................................................................................................................................................................................................................................................................................................................TTTCAGCGAGGGTAGAATGAAAC.2313.00300000001002000000
...........................................................................................................................AGTGAATTGTGAAGTTG------------TATTCGTAGA.................................................................................................................................................................................................................2713.00300000003000000000
...........................................................................................................................................G------------TATTCGTAGACAGCTGA..........................................................................................................................................................................................................1813.00300000000003000000
..................................................................................................................................................................................TTCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTAGT...........................................................................................................................................3013.00300000021000000000
.............................................................................................................................................................................................................................................................................................................................................................TCAGCGAGGGTAGAATGAAACC2213.00300000010002000000
..................................................................................................................................................................................................................................................................................AAGCATCTCATA------------------------------------------------------------ATTTCAGCGAGGG............2513.00300000021000000000
.............................................................................................................................................................................................TTCGGTGTACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCT............................................................................................2813.00300000000000030000
..............................................................................................................................................................................................TCGGTGTACCT-----------------------GT-TTAGTTTT-.......................................................................................................................................2113.00300000000000030000
...........................................................................................................................AGTGAATTGTGAAGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................2913.00300000003000000000
.........................................................................................................................................................................................AAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................1813.00300000000003000000
........................................................................................................................................................TATTCGTAGACAGCTGAA.........................................................................................................................................................................................................1813.00300000001002000000
............................................................................................................................GTGAATTGTGAAGTTG------------TATT.......................................................................................................................................................................................................................2013.00300000000003000000
......................................................................................................................TACAGAGTGAATTGTGAAGTTG------------...........................................................................................................................................................................................................................2213.00300000000003000000
......................................................................................................................................................................................TCAAAAGTTCGGTGTACCT-----------------------GT-................................................................................................................................................2113.00300000002000010000
............................................................................................................................................................................TAATAGTTCTTCAAAAGTT....................................................................................................................................................................................1913.00300000000003000000
..................................................................................................................................................................................TTCTTCAAAAGTTCGGTGTACCT-----------------------GT-A...............................................................................................................................................2613.00300000000000030000
.......................................................................................................................................................................................CAAAAGTTCGGTGTACCT-----------------------GT-TTAGTTT.........................................................................................................................................2713.00300000012000000000
....................................................................................................................................................................................................................................TAGTTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTT.....................2413.00300000000000030000
........................................................................................................................................................................................................................................TTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCAG..................2313.00300000003000000000
.............................................................................................................................................................................................TTCGGTGTACCT-----------------------GT-TTAGT...........................................................................................................................................1913.00300000000003000000
....................................................................................................................GTTACAGAGTGAATTGTGAAGT.........................................................................................................................................................................................................................................2213.00300000000003000000
............................................................................................................................GTGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................1813.00300000000003000000
......................................................................................................................................AAGTTG------------TATTCGTAGACAGCT............................................................................................................................................................................................................2113.00300000000003000000
....................................................................................................................................................................................................TACCT-----------------------GT-TTAGTTTT-T-------------------------------------AAGCA............................................................................................2113.00300002000001000000
TTT--------------------------------------------------------------------------------------------------------------TTCGTTACAGAGTGAATTGTG.............................................................................................................................................................................................................................................2413.00300000021000000000
............................................................................................................................................................................................................................................................................................................................................................TTCAGCGAGGGTAGAATGAAAC.2213.00300010000002000000
.....................................................................................................................TTACAGAGTGAATTGTGAAGTTG------------TATT.......................................................................................................................................................................................................................2713.00300010000002000000
........................................................................................................................................................................................AAAAGTTCGGTGTACC...........................................................................................................................................................................1613.00300000000003000000
........................................................................................................................................GTTG------------TATTCGTAGACAGCTGAATCTAA....................................................................................................................................................................................................2713.00300002001000000000
................................................................................................................................................................................AGTTCTTCAAAAGTTCGGTGTACCT-----------------------...................................................................................................................................................2513.00300000000001020000
.............................................................................................................................TGAATTGTGAAGTTG------------TA.........................................................................................................................................................................................................................1713.00300000000003000000
......................................................................................................................TACAGAGTGAATTGTGAAGTTG------------T..........................................................................................................................................................................................................................2313.00300000001001010000
..............................................................................................................................GAATTGTGAAGTTG------------TATTCGTAGACA...............................................................................................................................................................................................................2613.00300000021000000000
..............................................................................................................................GAATTGTGAAGTTG------------TATTCGTAGACAGCT............................................................................................................................................................................................................2913.00300000011001000000
droSec2
G--------------------------------------------------------------------------------------------------------------------------AGTGAATGGAGTAATTG------------TATTTAATTATAGATCTGCCTATGAGATCTCTTATGGAACTATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCAGTTCAGGTTGAATGGAAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCAGTTCAGGT...........2731.0033000
..........................................................................................................................................................................................TGGAACTATGGAGTT-----------------------TT-TCTGCCTT-.......................................................................................................................................2541.0044000
..............................................................................................................................................................................TGAGATCTCTTATGGAACTATGGAGTT-----------------------...................................................................................................................................................2741.0043001
.....................................................................................................................................................................................TCTTATGGAACTATGGAGTT-----------------------TT-TCTGCC..........................................................................................................................................2840.7533000
.....................................................................................................................................................................................................................................TGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCAGT.................2770.7155000
..................................................................................................................................................................................................................................................................................TGACATCTCATG------------------------------------------------------------ATTTCAGTTCAGGTT..........2730.6722000
..........................................................................................................................................................................................TGGAACTATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------.................................................................................................2640.5022000
................................................................................................................................................................................................TATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------TGACATC..........................................................................................2740.5022000
......................................................................................................................................................................................CTTATGGAACTATGGAGTT-----------------------TT-TCTGCC..........................................................................................................................................2740.5021001
......................................................................................................................................................................TCTGCCTATGAGATCTCTTATGGAAC...................................................................................................................................................................................2640.5022000
.......................................................................................................................................................................................................................................................................................TCTCATG------------------------------------------------------------ATTTCAGTTCAGGTTGAA.......2530.3311000
..................................................................................................................................................................................................................................................................................TGACATCTCATG------------------------------------------------------------ATTTCAGTTCAGG............2530.3311000
.........................................................................................................................................................................................................................................................................................TCATG------------------------------------------------------------ATTTCAGTTCAGGTTGAA.......2330.3311000
...........................................................................................................................................................................................................................................................................................................................................................TTTCAGTTCAGGTTGAATGG....2030.3311000
..........................................................................................................................................TG------------TATTTAATTATAGATCTGCCTATGAGA................................................................................................................................................................................................2940.2511000
........................................................................................................................................................................TGCCTATGAGATCTCTTATGGAAC...................................................................................................................................................................................2440.2511000
.......................................................................................................................................................................................TTATGGAACTATGGAGTT-----------------------TT-TCTGCC..........................................................................................................................................2640.2511000
..........................................................................................................................................TG------------TATTTAATTATAGATCTGCCTATGA..................................................................................................................................................................................................2740.2511000
...............................................................................................................................................................TTATAGATCTGCCTATGAGAT...............................................................................................................................................................................................2140.2510001
........................................................................................................................................................TATTTAATTATAGATCTGCCTATGAGA................................................................................................................................................................................................2740.2511000
.........................................................................................................................................................................GCCTATGAGATCTCTTATGGAACTA.................................................................................................................................................................................2540.2511000
.......................................................................................................................................................................................TTATGGAACTATGGAGTT-----------------------TT-................................................................................................................................................2040.2511000
.....................................................................................................................................................................................TCTTATGGAACTATGGAGTT-----------------------TT-TC..............................................................................................................................................2440.2510001
.......................................................................................................................................................................................TTATGGAACTATGGAGTT-----------------------TT-TCTGCCTT-.......................................................................................................................................2840.2511000
......................................................................................................................................................................................CTTATGGAACTATGGAGTT-----------------------TT-TC..............................................................................................................................................2340.2511000
......................................................................................................................................................................TCTGCCTATGAGATCTCTTATGGAACTA.................................................................................................................................................................................2840.2511000
............................................................................................................................................................................TATGAGATCTCTTATGGAACTATGG..............................................................................................................................................................................2540.2511000
................................................................................................................................................................................................TATGGAGTT-----------------------TT-TCTGCCTT-T-------------------------------------TGACATCT.........................................................................................2840.2511000
.............................................................................................................................TGAATGGAGTAATTG------------TATTTAATTAT................................................................................................................................................................................................................2650.2011000
................................................................................................................................................................................................................................TT-TCTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATT......................2670.1411000
....................................................................................................................................................................................................................................CTGCCTT-T-------------------------------------TGACATCTCATG------------------------------------------------------------ATTTCAG..................2770.1411000
droYak3
TG------------------------------------------------------------------------------------------------------G-TCGTTGTTTTGTTACGGATTGTATTGAGTAATTA------------TACTCATAAACGGACCTGTCTAATATTTCTTCAAATGTTCGGTGCACCT-----------------------GT-TTTGCTTT-T-------------------------------------AAAGATCTCATG------------------------------------------------------------GTTTCGGCAAGAGTGGAATGGAATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AA------------------------------------------------------------------AAAATA---------------------TTTCTTATGG-TCGTTTTTTTGTTACAGAGTGAATTGTGAAGTTG------------TATTCGTAGACAGCTGAATCTAATAGTTCTTCAAAAGTTCGGTGTACCT-----------------------GT-TTGGTTTT-T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCGGCGAGGGTGGAATGAAACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................T-------------------------------------AAGCATCTCATA------------------------------------------------------------ATTTCGGCGAGGG............26111.001110000010
....................................................................................................................................................................................................TACCT-----------------------GT-TTGGTTTT-T-------------------------------------AAGCATCTCA.......................................................................................26110.5560000006

Generated: 05/17/2015 at 10:40 PM