ID:

dwi_2738

 Coordinate:

scf2_1100000004909:5738949-5739099 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.7 -17.6 -17.4 -17.3

Flybase annnotation

CDS [Dwil\GK25249-cds]; exon [dwil_GLEANR_9404:6]; intron [Dwil\GK25249-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature
star
  1. dwi_2738  scf2_1100000004909:5738965-5738984 -
  2. scf2_1100000004921:2197889-2197908 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCCGGACGGCGTCTGCGTTCAAATGGCGGTGATCATTCAACAATGATGAGGTGAGGATCGAATCAAAAGAGAGATACATAACTCGCCTGTCTCTCTCTCTTTCTCTATCTTTTTGGTCCCATTCTATGCGTGTGTGTGTGCATGTGTGAGAGTGCTGGTATGCCAGTATGTGTGTGTGTGTAGTATTGCTCCTTCTGCTGCTGCTGAATGAATGTTGCTCTTTCATTTAATTTTGTTTCCTTTCATTTTTT
*************************************************************************************************........((......((((((((((((((((((((......)))))))).))))))..))...))))..................))****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 M020
head
 V118
embryo
 V119
head
..............GCGTTCTAAGGGCGGTGA........................................................................................................................................................................................................................... 18 2 2 5.50 11 3 7 0 0 1
................GTTCAAATGGCGGTGATC......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0
....GACGGCGTCTGCGTTCAAATGGCGGT............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
....GACGGCGTCTGCGTTCAAATGGC................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0
.................................................................................................TCTTTCTCTATCTTTTTGGTC..................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
..........GTCTGCGTTCAAATGGCGGT............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.............AGCGTTCTAAGGGCGGTGA........................................................................................................................................................................................................................... 19 3 10 0.60 6 4 2 0 0 0
..............GCGTTCTAAGGGCGGTGAA.......................................................................................................................................................................................................................... 19 3 8 0.50 4 1 3 0 0 0
.....................................................................................................................................................................GTATGTGTGTGTGTGTAGTA.................................................................. 20 0 2 0.50 1 0 0 0 1 0
...................................CTCAACGATGAGGAGGTGAGG................................................................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0
................................................................................................................................................AGTGAGAATGCTGGTATG......................................................................................... 18 2 6 0.17 1 0 0 0 0 1
...........................................................................................................................................................TCGTATCCTAGTATGTGTGTGT.......................................................................... 22 3 17 0.06 1 0 0 0 0 1
......CGGCGACTGGGTTCAAAG................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

CGGCCTGCCGCAGACGCAAGTTTACCGCCACTAGTAAGTTGTTACTACTCCACTCCTAGCTTAGTTTTCTCTCTATGTATTGAGCGGACAGAGAGAGAGAAAGAGATAGAAAAACCAGGGTAAGATACGCACACACACACGTACACACTCTCACGACCATACGGTCATACACACACACACATCATAACGAGGAAGACGACGACGACTTACTTACAACGAGAAAGTAAATTAAAACAAAGGAAAGTAAAAAA
******************************************************************........((......((((((((((((((((((((......)))))))).))))))..))...))))..................))************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M020
head
 M045
female body
 V118
embryo
 V119
head
..................................TAAGTAGTTAGTACTCCA....................................................................................................................................................................................................... 18 2 10 0.10 1 0 0 1 0 0
.........................................................................................AGAGAGAGAGAAAGAGATAG.............................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0
..................................................................................AGCGGACTGAGAGAGCGTA...................................................................................................................................................... 19 3 20 0.10 2 0 2 0 0 0
....................................................................................................................AGGGTAAGAAACGCAAACA.................................................................................................................... 19 2 16 0.06 1 1 0 0 0 0
...........................................................................................................................................................................................................GGCTTACTTACAAGGAGAG............................. 19 3 18 0.06 1 1 0 0 0 0
.........................................................................................AGAGAGAGAGAAAGAGATA............................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
...........................................................................................AGAGAGAGAAAGAGATAG.............................................................................................................................................. 18 0 20 0.05 1 0 0 0 1 0
.........................................................................................AGAGAGAGAGAAAGAGATAGA............................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004909:5738899-5739149 - dwi_2738 GCCGGACGGCGTCTGCGTT---CAAATGGCGGTGATCATTCAACAATGATGAGGTGAGGATCGAATCAAAAGA-------------------------GAGAT-ACA---TAACTCGCCTGTCTCTCTCTCT-----------------TTCTCTATCTTTTTGGTCCCATT--------------------------------------------------------------C--------TATGCGTG----TGTGTGTG-------------------------------------------------------CATGTGTGAGAGTGCT------------GGTAT-----------GC----CAG---TATGTGTGTGTG--TGTA-GTA---TTGCTCCTT--------------------------------------------------------CTGCTG---------CTGCTGAA----TGAATGTTGCTCTTTC---ATTTAATTTTGTTTCCT--TTCATTTTTT
droVir3 scaffold_13049:19792624-19792772 - ATGGC-------TC-TGC-----------------------------------------------------------------------------------------------------ATTCCCTCTTTCTTGCCATATCTCCTATT-----A---CTTTTTTCTTTCACT--------------------------------------------------------------C--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGC-----------AC----AAGCAATT--TGTGCAT-------------------------------TGGACAT----------------TTTGGG------------------------------CGCTGTGCTGCTTTGATAAGCGT--------------------------------------TGC
droMoj3 scaffold_6496:13998086-13998318 - GCGAC-------GATCGCA---ACAATGG------CGAAGCAGAGGCTAAAGCAAAAG--------------C-------------------------GCATT-ATGGCCGCGTTCGC-------------------------TTGCA-----G---TTTTTTTCCCTCACTTGGAGCAG-----------------------------------CGCGACCTC-------AG-C--------TGTATGTG----TGCGTGTG-------------------------------------------------------TGTGTGTGAGTGTGCT------------TGTGT-----------GT----CTG---TTT--GTATGTTTGCGTTGTTA---TCGCTCATTTTCACTT-------------------------------------------TAATA--------------------TGAG----TTTTTGTTGCTTTTGC---TGTTGCTGTTGTTTTCT--TTTGGAGTTT
droGri2 scaffold_14853:3799310-3799449 - TGTGT-------GTGTGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGC-----------GT----GTG---TGT--GTGTGTGTGTGT---TA---TTGTTTCTT--------------------------------------------------------TTGCTTATGAGCACTCTGCCGAGTT-----GAGTTGCGTATTCTGTATTTGATTTTCAATCGTTTTGCATCTCTT
dp5 XL_group1a:7910606-7910656 - GCCGGCAAGCGGCTGCGCG---CCAATGG------CGATCCCACGCTGAAGAGGTGAG--------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droPer2 scaffold_22:762677-762827 - GAATC-------------------------------------------AAAAAATAAT--------------TAAAACAGGAAGAT------------CCATC----------------CATCCATCCTTCT-----------------TTCTCTC-TCTTTCTCTCTCTTT--------------------------------------------------------------C--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGCGCTCT------------GGCGT-----------GC----CAA---GTA---------------------------------------------TTAAGTGG-----------------GAATACTGTTTCAGCTTCCGT----------------------------------------------------------------TTCCGCT
droAna3 scaffold_13117:3920820-3921049 - GCGTC----------CGCG---GCAACGGCGC---TGATCCAGCGCTGAAGAGGTGAG--------------C-------------------------TCATC-CATCTCCCATCTCC-------------------------TCCTAGTCTTCTCTCTTCCT----------GGATCAGATCCTGTTC-TCCGTTCT---------C---CGTTCTCCTCCTC--------------------------------AGCCACCAGTCCACTA-------------------------------------------------------GCTAGTTAATGGATGTGTGTGGAT----CTTCTTTTT-----------------------------ATA---TTTCTCCTTTTTTCCTTTTTGAGT----------------TTTGAG----TTTTTGTTTCCGTTTCCG--------------------------------------------------------------TTTTCTATTT
droBip1 scf7180000396424:973092-973235 + TTTTC-------CATCTT-----------------------------------------------------------------------------------------------------------------------------------------------TTGTTTTCA--------------------------------------------------------------------------GTGTGTGTGTGTGTGTATG-------------------------------------------------------AGTGTGCGAATGTGCC------------AGTGT-----------GT----GTG---TGTGTG--TGTGTGTGTACGTG---TTGCTTGTACGTGTGTATAGAAAT----------------TTCTAA-TGATTTTTGTTG-------------------------------------------------------------TGTTTCC---CCCCTCTCTT
droKik1 scf7180000302544:752425-752656 + CG--G-------CATCGCG---CCAATGGCGG---CGATACCACGCTCAAAAGGTGAG--------------TGCGAGAGA----TCTTTGACCAATCCCATC------------AGA---------------------------------------------------------------TCCAGATCCT---TTACAAAAAATATTTAGCAAT--AACCCAATGACCCCAGTCTCTGCTGAAGTGTGTG----TGTGTGTG-------------------------------------------------------AGT----------G---------------GTGT----GTG---GGT----GGG---TG--TGCTTGGA--TA--------------------------------TGGAGTGTGCTTTTTGCCTTCAG--TTTTTTTATTTCCATTT-------------------------------------------------------T---CCGTTCTCCATTCTCC
droFic1 scf7180000454050:923809-923850 - ACCGG-------CCGCGTG---CCAATGG------TGATCCCACGCTCCAGAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491011:220883-220983 - CTTTT-------TTTCGCG---TTCT----------------------------------------------------------------------------------------------------------------------------------------TTTTTGCATT--------------------------------------------------------------C--------TGTGTG--------TGTGTG-------------------------------------------------------CGAGTGTGCGAACGTG------------TGTGT-----------GT----GTG---TGT--GTGTGTGTGCGA---TG---TTGCTGCTG--------------------------------------------------------CTGCTG---------C--------------------------------------------------------TGC
droRho1 scf7180000779479:327913-328079 - CCCCC-------TCTC-TT---TCAGCAT------CAATA-------------------------------------------------------------------------------------------------CATCATTTTCG-----T---CTTTTCTCTTTCACT--------------------------------------------------------------T--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TATGTGTGCGAGTGGT------------TATTC-----------CT----CTG---TG--TGTGTGTG--TGTT-G--ATTTTA------TGCCACTCTTTTCAT----------------TTTTTT-GGTTTTTTGTTGCAGTTTT---------------------------------------------ATT----------------TATTTTTTTT
droBia1 scf7180000298389:676804-676827 - GCCGC-------CTGCGTG---CCAACGG------CGATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413998:72142-72164 - GCCGG-------CTGCGCG---CCAACGG------CGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409110:1432852-1433095 - ACCGG-------CTGCGTG---CCAATGG------CGATCCAACGCTCCAGAGGTGAGG-------------C-------------------------CCATCTATA---CAATCCGTTGATCTGCCT-------------------------------------------------------CAGATTCT----------------CCAGCATT--ATTCCCACGACCCACG--------------------------------TCCGCTAATCCCGGCTGATGATGTGTTGTGCCTGTTGTGGATCTGTGTGTGTACGT----GTGTGTG----------------CGTGAGTGTGAATAGT----GGA---TG--TGTC------TGAT-A--ATAATG------CGGAGAGCTTTTAAT----------------TTACCACACTTTT-----------------------------------------------------------------------CCGT--TTCCGCTTTT
dm3 chr3R:2242476-2242561 - CTCTC-------CTCCTTA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGT-----------GT----GTG---TGT--GTATGTGTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 node_112651:1354-1424 + TTTTG-------TCTCCCT---CCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTG----TCTGTATG-------------------------------------------------------TATGTGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TGTA-G-------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_15:325773-325869 - CTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTG----TGTGTGTG-----------------------------------------------TGTG----TGTGTGAGTGCGCG----------------CGT-----------GCGTGCGAG---TGT--GTCTGTGCGCGTT-C--CTAATT------CTTCGATTATT-----------------------------------------------------------------------------------------------ACATTCATTTAGT---------TTT
droYak3 X:7254339-7254578 - ACCGG-------CTGCGTGCCGCCAATGG------CGATCCAACGCTCCAGAGGTGAG--------------C-------------------------CCATC------------CGGTGATCTA-------TG------------------------------------------------CCAGATCCT----------------CCAGCATT--ATTCCCACGACCC--G--------------------------------TCCGCTATTCCCGGCTGATGATGTGTTGTGCCTGTTGTG--------------GATGTGTGTGAATA---------------GTGG-----------GT----GTG---TGTGTG--TGTGAGAGA---T---AGTG------CGGAGCGCTTTGTAT----------------TTTCCACACTTTTCCGTTTCCATTTCCG------------------------------T------------------TTCCCA---ATTTTCCGTTCTTT
droEre2 scaffold_4690:13891810-13891851 + ACCGG-------CTGCGTG---CCAATGG------CGATCCAACGCTCCAGAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GCCGGACGGCGTCTGCGTT---CAAATGGCGGTGATCATTCAACAATGATGAGGTGAGGATCGAATCAAAAGA-------------------------GAGAT-ACA---TAACTCGCCTGTCTCTCTCTCT-----------------TTCTCTATCTTTTTGGTCCCATT--------------------------------------------------------------C--------TATGCGTG----TGTGTGTG-------------------------------------------------------CATGTGTGAGAGTGCT------------GGTAT-----------GC----CAG---TATGTGTGTGTG--TGTA-GTA---TTGCTCCTT--------------------------------------------------------CTGCTG---------CTGCTGAA----TGAATGTTGCTCTTTC---ATTTAATTTTGTTTCCT--TTCATTTTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................GTT---CAAATGGCGGTGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
....GACGGCGTCTGCGTT---CAAATGGCGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
....GACGGCGTCTGCGTT---CAAATGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.................................................................................................................................TCT-----------------TTCTCTATCTTTTTGGTC....................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
..........GTCTGCGTT---CAAATGGCGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................................G---TATGTGTGTGTG--TGTA-GTA---............................................................................................................................................2020.50100010
droVir3
ATGGC-------TC-TGC-----------------------------------------------------------------------------------------------------ATTCCCTCTTTCTTGCCATATCTCCTATT-----A---CTTTTTTCTTTCACT--------------------------------------------------------------C--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGC-----------AC----AAGCAATT--TGTGCAT-------------------------------TGGACAT----------------TTTGGG------------------------------CGCTGTGCTGCTTTGATAAGCGT--------------------------------------TGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTG------------TGTGC-----------AC----AA.........................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTG------------TGTGC-----------A................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
GCGAC-------GATCGCA---ACAATGG------CGAAGCAGAGGCTAAAGCAAAAG--------------C-------------------------GCATT-ATGGCCGCGTTCGC-------------------------TTGCA-----G---TTTTTTTCCCTCACTTGGAGCAG-----------------------------------CGCGACCTC-------AG-C--------TGTATGTG----TGCGTGTG-------------------------------------------------------TGTGTGTGAGTGTGCT------------TGTGT-----------GT----CTG---TTT--GTATGTTTGCGTTGTTA---TCGCTCATTTTCACTT-------------------------------------------TAATA--------------------TGAG----TTTTTGTTGCTTTTGC---TGTTGCTGTTGTTTTCT--TTTGGAGTTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................C-------AG-C--------TGTATGTG----TGCGTGT.....................................................................................................................................................................................................................................................................................1930.331100000
droGri2
TGTGT-------GTGTGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGC-----------GT----GTG---TGT--GTGTGTGTGTGT---TA---TTGTTTCTT--------------------------------------------------------TTGCTTATGAGCACTCTGCCGAGTT-----GAGTTGCGTATTCTGTATTTGATTTTCAATCGTTTTGCATCTCTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTG------------TGTGC-----------G................................................................................................................................................................................20200.05101
dp5
GCCGGCAAGCGGCTGCGCG---CCAATGG------CGATCCCACGCTGAAGAGGTGAG--------------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GAATC-------------------------------------------AAAAAATAAT--------------TAAAACAGGAAGAT------------CCATC----------------CATCCATCCTTCT-----------------TTCTCTC-TCTTTCTCTCTCTTT--------------------------------------------------------------C--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGCGCTCT------------GGCGT-----------GC----CAA---GTA---------------------------------------------TTAAGTGG-----------------GAATACTGTTTCAGCTTCCGT----------------------------------------------------------------TTCCGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------TGTGTGTGTGCGCT...............................................................................................................................................................................................................19200.153000102
..................................................................................................................................................................................................................................................................GTGTG-------------------------------------------------------TGTGTGTGTGCGCTC..............................................................................................................................................................................................................2080.131100000
......................................................................................................................................................................CTCTTT--------------------------------------------------------------C--------TGTGTGTG----TGTGT.......................................................................................................................................................................................................................................................................................20100.101010000
droAna3
GCGTC----------CGCG---GCAACGGCGC---TGATCCAGCGCTGAAGAGGTGAG--------------C-------------------------TCATC-CATCTCCCATCTCC-------------------------TCCTAGTCTTCTCTCTTCCT----------GGATCAGATCCTGTTC-TCCGTTCT---------C---CGTTCTCCTCCTC--------------------------------AGCCACCAGTCCACTA-------------------------------------------------------GCTAGTTAATGGATGTGTGTGGAT----CTTCTTTTT-----------------------------ATA---TTTCTCCTTTTTTCCTTTTTGAGT----------------TTTGAG----TTTTTGTTTCCGTTTCCG--------------------------------------------------------------TTTTCTATTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTTTC-------CATCTT-----------------------------------------------------------------------------------------------------------------------------------------------TTGTTTTCA--------------------------------------------------------------------------GTGTGTGTGTGTGTGTATG-------------------------------------------------------AGTGTGCGAATGTGCC------------AGTGT-----------GT----GTG---TGTGTG--TGTGTGTGTACGTG---TTGCTTGTACGTGTGTATAGAAAT----------------TTCTAA-TGATTTTTGTTG-------------------------------------------------------------TGTTTCC---CCCCTCTCTTSizeHit CountTotal NormTotal
No Reads
droKik1
CG--G-------CATCGCG---CCAATGGCGG---CGATACCACGCTCAAAAGGTGAG--------------TGCGAGAGA----TCTTTGACCAATCCCATC------------AGA---------------------------------------------------------------TCCAGATCCT---TTACAAAAAATATTTAGCAAT--AACCCAATGACCCCAGTCTCTGCTGAAGTGTGTG----TGTGTGTG-------------------------------------------------------AGT----------G---------------GTGT----GTG---GGT----GGG---TG--TGCTTGGA--TA--------------------------------TGGAGTGTGCTTTTTGCCTTCAG--TTTTTTTATTTCCATTT-------------------------------------------------------T---CCGTTCTCCATTCTCCSizeHit CountTotal NormTotal
No Reads
droFic1
ACCGG-------CCGCGTG---CCAATGG------TGATCCCACGCTCCAGAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTTTT-------TTTCGCG---TTCT----------------------------------------------------------------------------------------------------------------------------------------TTTTTGCATT--------------------------------------------------------------C--------TGTGTG--------TGTGTG-------------------------------------------------------CGAGTGTGCGAACGTG------------TGTGT-----------GT----GTG---TGT--GTGTGTGTGCGA---TG---TTGCTGCTG--------------------------------------------------------CTGCTG---------C--------------------------------------------------------TGCSizeHit CountTotal NormTotal
No Reads
droRho1
CCCCC-------TCTC-TT---TCAGCAT------CAATA-------------------------------------------------------------------------------------------------CATCATTTTCG-----T---CTTTTCTCTTTCACT--------------------------------------------------------------T--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TATGTGTGCGAGTGGT------------TATTC-----------CT----CTG---TG--TGTGTGTG--TGTT-G--ATTTTA------TGCCACTCTTTTCAT----------------TTTTTT-GGTTTTTTGTTGCAGTTTT---------------------------------------------ATT----------------TATTTTTTTTSizeHit CountTotal NormTotal
No Reads
droBia1
GCCGC-------CTGCGTG---CCAACGG------CGATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCCGG-------CTGCGCG---CCAACGG------CGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ACCGG-------CTGCGTG---CCAATGG------CGATCCAACGCTCCAGAGGTGAGG-------------C-------------------------CCATCTATA---CAATCCGTTGATCTGCCT-------------------------------------------------------CAGATTCT----------------CCAGCATT--ATTCCCACGACCCACG--------------------------------TCCGCTAATCCCGGCTGATGATGTGTTGTGCCTGTTGTGGATCTGTGTGTGTACGT----GTGTGTG----------------CGTGAGTGTGAATAGT----GGA---TG--TGTC------TGAT-A--ATAATG------CGGAGAGCTTTTAAT----------------TTACCACACTTTT-----------------------------------------------------------------------CCGT--TTCCGCTTTTSizeHit CountTotal NormTotal
No Reads
dm3
CTCTC-------CTCCTTA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGT-----------GT----GTG---TGT--GTATGTGTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................TTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----T...........................................................................................................................................................................................................................................................................................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000114000000200000000000000001000000000
.................................................................................................................................................................TTGGTAACAGT--------------------------------------------------------------G--------TGTGTGT.................................................................................................................................................................................................................................................................................................19111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000212000000100000000000000001111000000
.................................................................................................................................................................TTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----............................................................................................................................................................................................................................................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000100000000000000001011000000
...............................................................................................................................................................TTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----T...........................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCCTTA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAACAGT--------------------------------------------------------------G--------TGTG....................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000
.....................................................................................................................................................................TAACAGT--------------------------------------------------------------G--------TGTGTGTG----TGT.........................................................................................................................................................................................................................................................................................1922.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000110000000
.................................................................................................................................................................TTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----TG..........................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----T...........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGT.................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................TTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGT.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----TGT.........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................TA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTG..................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----............................................................................................................................................................................................................................................................................................2211.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----T...........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----TT..........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TTTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----T...........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TTTTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTG----TGTG........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTGGTAACAGT--------------------------------------------------------------G--------TGTGTGTA----............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................GTAACAGT--------------------------------------------------------------G--------TGTGTGTG----TGTGTGT.....................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................TTGGTAACAGT--------------------------------------------------------------G--------TGTGTGA.................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................TTGGTAACAGT--------------------------------------------------------------G--------TGTGTG..................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TGTGTGTGTG------------TGTGT-----------GT----GTG---TGT--G...............................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTG------------TGTGT-----------GT----G..........................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000
..................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTG------------TGTGT-----------GT----GTG---TG...................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000
....................................................................................................................................................................................................................................................................GTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGT-----------G................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000
..............................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTG------------TGTGT-----------GT----GTG---.....................................................................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000
..............................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTG------------TGTG.............................................................................................................................................................................................20200.2040000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000
......................................................................................................................................................................................................................................................................G-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGT-----------GT----G..........................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000
.....................................................................................................................................................................................................................................................................TG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGT-----------GT----G..........................................................................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000
.....................................................................................................................................................................................................................................................TGTGTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTG...................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGT-----------GT----GTG---TGT--GTATGTG.........................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................ACAGT--------------------------------------------------------------G--------TGTGTGTG----TGTGTGTG-------------------------------------------------------TGTGTT.......................................................................................................................................................................................................................2870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T-----------GT----GTG---TGT--GTATGTGTGTG.....................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTG------------TGTGT-----------GT----...........................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
CTCTC-------CTCCTTA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAA...................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGTGTGTG----TGTGTGTG-------------------------------------------------------TG...........................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
.........................................................................................................................................................................................................................................................TG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGTG.................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGTGT-----------GT----GTG---TGT--GTATGTGTG.......................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTG------------TGTGT-----------.................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
.......................................................................................................................................................................ACAGT--------------------------------------------------------------G--------TGTGTGTG----TGTG........................................................................................................................................................................................................................................................................................18150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGT-----------GT----GTG---TGT--GTATGTGTGT......................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
......................................................................................................................................................................................................................................................GTGTG----TGTGTGTG-------------------------------------------------------TGTGTG.......................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GT----GTG---TGT--GTATGTGTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TGTGT-----------GT----GTG---TGT--GTATGTG.........................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................TGTGTGTG----TGTGTGTG-------------------------------------------------------TGTG.........................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
CTCTC-------CTCCTTA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAACA.................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TG------------TGTGT-----------GT----GTG---TGT--GTATGT..........................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................G--------TGTGTGTG----TGTGTGTG-------------------------------------------------------T............................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGT-----------GT----GTG---TGT--GTATGTGT........................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGT-----------GT----GTG---TGT--GTATGTGTGTG.....................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGTGTG------------TGTGT-----------GT----GTG---TGT--GTA.............................................................................................................................................................32200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TGTGTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTGT-----------.................................................................................................................................................................................35200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TGTGTG------------TGTGT-----------GT----GTG---TGT--GTATG...........................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................TGTGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------.................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GTG----TGTGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------.................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GTGTG------------TGTGT-----------GT----GTG---TGT--GTAT............................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTGTGTGTG------------TGTGT-----------GT----GTG---TGT--GTA.............................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................TGTGTG----TGTGTGTG-------------------------------------------------------TGTGT........................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................T----GTG---TGT--GTATGTGTGTGT----------------------------------------------------------------------------------------------------------------------------------------------------19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................GTGTGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------T................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
CTCTC-------CTCCTTA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGT.....................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GT-----------GT----GTG---TGT--GTATGTGTG.......................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GTGTGTG-------------------------------------------------------TGTGTGTGTGTGTG...............................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................GTGTGTG----TGTGTGTG-------------------------------------------------------TGTGTG.......................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCTC-------CTCCTTA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAACA.................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................T----GTG---TGT--GTATGTGTGTG.....................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGTG-------------------------------------------------------TGTGTGTGTGTGTGTG------------TGTG.............................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CTCCTTA---G--------------------------------------------------------------------------------------------------------------------------------------CTTTTTGGTAACA.................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTTTG-------TCTCCCT---CCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTG----TCTGTATG-------------------------------------------------------TATGTGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TGTA-G-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGT..............................................................................................................................................................2420352.05704100197028000010200000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TG...............................................................................................................................................................232015.2530500032530000049000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---T....................................................................................................................................................................202013.252650000265000000000000
............................................................................................................................................................................................................................................................................................................................................................TGT-----------TT----GCA---TG--TGTGTGAG--TGT....................................................................................................................................................212011.152230000223000000000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................26204.358700000002901146001000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................24203.957900000004018200010000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--.................................................................................................................................................................26203.907800000001010410026000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--.................................................................................................................................................................24202.0040014400250000240000
............TCTCCCT---CCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTG----TCTGTATG-------------------------------------------------------T............................................................................................................................................................................................................................2612.00200000000000020000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGTG...........................................................................................................................................................26201.5531000000193612000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TG...............................................................................................................................................................26201.50300000001500150000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGT..............................................................................................................................................................25201.4028000000000919000000
.............................................................................................................................................................................................................................................................................................................................................T------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TGTA-..................................................................................................................................................25201.1523000100031252000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................25201.0521000120000110700000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TG...............................................................................................................................................................24201.0521000000500160000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTGT-----------TT----GCA---T....................................................................................................................................................................25201.0521000000000000165000
..................T---CCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTG----TCTGTATG-------------------------------------------------------TATG.........................................................................................................................................................................................................................2311.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................TATGTGTGTGGAGTCT------------GCTGT-----------TT----GC.........................................................................................................................................................................2511.00100000000001000000
...TG-------TCTCCCT---CCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTG----TCTGTA......................................................................................................................................................................................................................................................................................2521.00200010000010000000
..........................................................................................................................................................................................................................................................G----TCTGTATG-------------------------------------------------------TATGTGTGTGGAGTC..............................................................................................................................................................................................................2411.00100000000000010000
.......................................................................................................................................................................................................................................................TGTG----TCTGTATG-------------------------------------------------------TATGTGTGTGGA.................................................................................................................................................................................................................2411.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--T................................................................................................................................................................22200.8016000000000016000000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GCA---TG--TGT..............................................................................................................................................................23200.7515000000101310000000
.............................................................................................................................................................................................................................................................................................................................................T------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TGT....................................................................................................................................................24200.7515000100000212000000
.............................................................................................................................................................................................................................................................................................................................................T------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TG.....................................................................................................................................................23200.7515000100000112010000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTGT-----------TT----GCA---.....................................................................................................................................................................24200.7014000000010110002000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GCA---TG--T................................................................................................................................................................23200.6012000000000012000000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGT............................................................................................................................................................25200.601200000000606000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGT..............................................................................................................................................................27200.551100000020520020000
.....................................................................................................................................................................................................................................................TGTGTG----TCTGTATG-------------------------------------------------------TATGTGTG.....................................................................................................................................................................................................................2220.50100000000001000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GCA---T....................................................................................................................................................................23200.501000000000028000000
.............................................................................................................................................................................................................................................................................................................................................T------------GCTGT-----------TT----GCA---TG--TGTGTGAG--T......................................................................................................................................................22200.45900010000007010000
.............................................................................................................................................................................................................................................................................................................................................T------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TGTA-G-------------------------------------------------------------------------------------------------------------------------------------------------26200.45900000010314000000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGTGA..........................................................................................................................................................27200.40800000000214001000
..........................................................................................................................................................................................................................................................................................................................................GTCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--.......................................................................................................................................................24200.40800000000008000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCT..............................................................................................................................................................................................17200.35700000000007000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTGT-----------TT----G..........................................................................................................................................................................22200.35700000003004000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GCA---TG--.................................................................................................................................................................22200.30600000002004000000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GCA---TG--TG...............................................................................................................................................................22200.25500000000014000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTGT-----------TT----GC.........................................................................................................................................................................23200.25500000002030000000
.....................................................................................................................................................................................................................................................TGTGTG----TCTGTATG-------------------------------------------------------TA...........................................................................................................................................................................................................................1640.25100000001000000000
............................................................................................................................................................................................................................................................................................................................................................TGT-----------TT----GCA---TG--TGTGTGAG--TGTA-G-------------------------------------------------------------------------------------------------------------------------------------------------23200.20400000000211000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---G....................................................................................................................................................................20200.20400004000000000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCT..............................................................................................................................................................................................15200.20400000000004000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGT............................................................................................................................................................26200.20400000000004000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GC.........................................................................................................................................................................21200.15300000000003000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---.....................................................................................................................................................................19200.15300000000003000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GC.........................................................................................................................................................................19200.15300100000002000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GC.........................................................................................................................................................................18200.15300000000003000000
....................................................................................................................................................................................................................................................GTGTGTG----TCTGTATG-------------------------------------------------------TAA..........................................................................................................................................................................................................................1890.11100000000010000000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GC.........................................................................................................................................................................17200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................TCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--.......................................................................................................................................................23200.10200000000002000000
...........................................................................................................................................................................................................................................................................................................................................TCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TG.....................................................................................................................................................25200.10200010001000000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--T................................................................................................................................................................25200.10200000000200000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTGT-----------TT----GCA---A....................................................................................................................................................................25200.10200000000002000000
............................................................................................................................................................................................................................................................................................................................................CT------------GCTGT-----------TT----GCA---TG--TGTGTGA..........................................................................................................................................................21200.10200000010100000000
.................................................................................................................................................................................................................................................................................................................................GTGTGTGGAGTCT------------GCTG.............................................................................................................................................................................................17200.10200000000002000000
.................................................................................................................................................................................................................................................................................................................................GTGTGTGGAGTCT------------GCTGT-----------TT----GCA---T....................................................................................................................................................................24200.10200000001000010000
.................................................................................................................................................................................................................................................................................................................................GTGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--.................................................................................................................................................................25200.10200000000000020000
........................................................................................................................................................................................................................................................................................................................................GAGTCT------------GCTGT-----------TT----GCA---TG--TG...............................................................................................................................................................20200.10200000000002000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GC...............................................................................................................................................................................................16200.10200000000002000000
........................................................................................................................................................................................................................................................................................................................................GAGTCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--.......................................................................................................................................................26200.10200000000002000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TA...............................................................................................................................................................23200.10200002000000000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGAA...........................................................................................................................................................28200.10200000000000002000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGC..............................................................................................................................................................24200.10200001000001000000
..........................................................................................................................................................................................................................................................................................................................................................................TT----GCA---TG--TGTGTGAG--T......................................................................................................................................................16200.10200000000002000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................28200.10200000001000001000
.................................................................................................................................................................................................................................................................................................................................GTGTGTGGAGTCT------------GCTGT-----------TT----G..........................................................................................................................................................................21200.05100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................GCTGT-----------TT----GCA---TG--TGTGTGAG--TGT....................................................................................................................................................23200.05100000000001000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----G..........................................................................................................................................................................17200.05100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................GCTGT-----------TT----GCA---TG--TGTGTGAG--TG.....................................................................................................................................................22200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................................GTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--T................................................................................................................................................................24200.05100000000001000000
..........................................................................................................................................................................................................................................................................................................................................GTCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--T......................................................................................................................................................25200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................TCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TGTA-..................................................................................................................................................27200.05100000000010000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------A................................................................................................................................................................................16200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGA............................................................................................................................................................25200.05100000000001000000
.................................................................................................................................................................................................................................................................................................................................GTGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--T................................................................................................................................................................26200.05100000001000000000
...................................................................................................................................................................................................................................................................................................................................GTGTGGAGTCT------------GCTGT-----------TT----GC.........................................................................................................................................................................20200.05100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................GCTGT-----------TT----GCA---TG--TGTGTGAG--TGTA-..................................................................................................................................................24200.05100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................TT----GCA---TG--TGTGTGAG--TGT....................................................................................................................................................18200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................TG--TGTGTGAG--TGTA-G-------------------------------------------------------------------------------------------------------------------------------------------------15200.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................GT-----------TT----GCA---TG--TGTGTGAG--T......................................................................................................................................................18200.05100000000000100000
..........................................................................................................................................................................................................................................................................................................................................GTCT------------GCTGT-----------TT----GCA---TG--.................................................................................................................................................................16200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................TCT------------GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................19200.05100000000100000000
......................................................................................................................................................................................................................................................................................................................................TGGAGTCT------------GCTGT-----------TT----GCA---TG--TGC..............................................................................................................................................................23200.05100000000001000000
........................................................................................................................................................................................................................................................................................................................................GAGTCT------------GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................22200.05100000000100000000
.......................................................................................................................................................................................................................................................................................................................................GGAGTCT------------GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................23200.05100010000000000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGA............................................................................................................................................................27200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................T----GCA---TG--TGTGTGAG--TGTA-..................................................................................................................................................18200.05100000000010000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTG.............................................................................................................................................................................................18200.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGT............................................................................................................................................................27200.05100000000100000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GCA---A....................................................................................................................................................................23200.05100000001000000000
.............................................................................................................................................................................................................................................................................................................................................T------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TGTA-A-------------------------------------------------------------------------------------------------------------------------------------------------26200.05100000000010000000
............................................................................................................................................................................................................................................................................................................................................CT------------GCTGT-----------TT----GCA---TG--TGT..............................................................................................................................................................17200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................AGTCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TG.....................................................................................................................................................27200.05100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................GCTGT-----------TT----GCA---TG--TGTGTGAG--T......................................................................................................................................................21200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................TCT------------GCTGT-----------TT----GCA---TG--TGTGTGA..........................................................................................................................................................22200.05100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................16200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................TCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--T......................................................................................................................................................24200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGC..............................................................................................................................................................27200.05100000010000000000
....................................................................................................................................................................................................................................................GTGTGTG----TCTGTATG-------------------------------------------------------.............................................................................................................................................................................................................................15200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................TGTGTGGAGTCT------------GCTGT-----------TT----...........................................................................................................................................................................19200.05100000000001000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTGT-----------TT----GCA---TG--T................................................................................................................................................................27200.05100000001000000000
.........................................................................................................................................................................................................................................................................................................................................AGTCT------------GCTGT-----------TT----GCA---TG--TGTGTGA..........................................................................................................................................................24200.05100000010000000000
....................................................................................................................................................................................................................................................................................................................................TGTGGAGTCT------------GCTGT-----------TT----...........................................................................................................................................................................17200.05100000000001000000
...........................................................................................................................................................................................................................................................................................................................................TCT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TGT....................................................................................................................................................26200.05100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TT----GCA---TG--TGTGTGAG--TG.....................................................................................................................................................17200.05100000000001000000
.........................................................................................................................................................................................................................................................................................................................................AGTCT------------GCTGT-----------TT----GCA---TG--TGTG.............................................................................................................................................................21200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................TGT-----------TT----GCA---TG--TGTGT............................................................................................................................................................15200.05100000000001000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TT...............................................................................................................................................................23200.05100001000000000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGA..............................................................................................................................................................24200.05100001000000000000
................................................................................................................................................................................................................................................................................................................................TGTGTGTGGAGTCT------------GCTGT-----------.................................................................................................................................................................................19200.05100000000001000000
.....................................................................................................................................................................................................................................................................................................................................GTGGAGTCT------------GCTGT-----------TT----GCA---TG--TGTGTG...........................................................................................................................................................27200.05100000000000100000
............................................................................................................................................................................................................................................................................................................................................CT------------GCTGT-----------TT----GCA---TG--TGTGTGAG--TG.....................................................................................................................................................24200.05100000000001000000
droSec2
CTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTG----TGTGTGTG-----------------------------------------------TGTG----TGTGTGAGTGCGCG----------------CGT-----------GCGTGCGAG---TGT--GTCTGTGCGCGTT-C--CTAATT------CTTCGATTATT-----------------------------------------------------------------------------------------------ACATTCATTTAGT---------TTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................G----TGTGTGAGTGCGCG----------------CGT-----------GCGTG............................................................................................................................................................................2311.0010010
droYak3
ACCGG-------CTGCGTGCCGCCAATGG------CGATCCAACGCTCCAGAGGTGAG--------------C-------------------------CCATC------------CGGTGATCTA-------TG------------------------------------------------CCAGATCCT----------------CCAGCATT--ATTCCCACGACCC--G--------------------------------TCCGCTATTCCCGGCTGATGATGTGTTGTGCCTGTTGTG--------------GATGTGTGTGAATA---------------GTGG-----------GT----GTG---TGTGTG--TGTGAGAGA---T---AGTG------CGGAGCGCTTTGTAT----------------TTTCCACACTTTTCCGTTTCCATTTCCG------------------------------T------------------TTCCCA---ATTTTCCGTTCTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................TATTCCCGGCTGATGATGTGTT.......................................................................................................................................................................................................................................................2211.00100010000000
droEre2
ACCGG-------CTGCGTG---CCAATGG------CGATCCAACGCTCCAGAGGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 05:14 AM