ID:

dwi_2726

 Coordinate:

scf2_1100000004909:5357764-5357814 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.8 -3.8

Flybase annnotation

intron [Dwil\GK25265-in]; CDS [Dwil\GK25265-cds]; exon [dwil_GLEANR_9419:8]; CDS [Dwil\GK25265-cds]; exon [dwil_GLEANR_9419:7]; intron [Dwil\GK25265-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------################################------------------
TACAAGTTGCAGTCCAGCGGCTGCTAACATAGCTGCACGCACTTCGGCTGGTCTAGAGGATTCAGGCAAGGAGACTACAAAGGATACAAAGGAGACAAAAGAGTCAAAGGATGGCAAAGACTTGCATCGAGCGGTAATTTCTAGTGTTATA
**************************************************((((..((..(((......)))..))................)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 V118
embryo
 M045
female body
 M020
head
.............................................................................................GACAAAAGAGTCAAAGGATGGCAAAGA............................... 27 0 1 4.00 4 4 0 0 0
........................................................................GACTACAAAGGATACAAAGGAGAC....................................................... 24 0 1 3.00 3 2 1 0 0
.....GTTGCAGTCCAGCGGCTG................................................................................................................................ 18 0 1 3.00 3 0 0 0 3
........................................................................GACTACAAAGGATACAAAGGAGA........................................................ 23 0 1 2.00 2 2 0 0 0
..........AGTCCAGCGGCTGCTAACATAGCT..................................................................................................................... 24 0 1 2.00 2 1 1 0 0
........................................................................................AAGGAGACATAAGAGTCA............................................. 18 1 1 2.00 2 0 2 0 0
........................................................................................AAGGAGACATAAGAGTCC............................................. 18 2 5 1.60 8 0 8 0 0
............................................................................ACAAAGGATACAAAGGAGACAAAAGA................................................. 26 0 1 1.00 1 1 0 0 0
...........GTCCAGCGGCTGCTAACATAGCT..................................................................................................................... 23 0 1 1.00 1 1 0 0 0
................................................TGGTCTAGAGGATTCAGGCAAGGA............................................................................... 24 0 1 1.00 1 1 0 0 0
...............................GCTGCACGCACTTCGGCTGGT................................................................................................... 21 0 1 1.00 1 0 0 1 0
...............................................................................................CAAAAGAGTCAAAGGATGG..................................... 19 0 1 1.00 1 1 0 0 0
.......................................................................................................TCAAAGGATGGCAAAGACTTGC.......................... 22 0 1 1.00 1 1 0 0 0
..........................................................................CTACAAAGGATACAAAGGAGACAAAAGA................................................. 28 0 1 1.00 1 1 0 0 0
...................................................................................ATACAAAGGAGACAAAAGA................................................. 19 0 1 1.00 1 1 0 0 0
..........................................................................CTACAAAGGATACAAAGGAGACA...................................................... 23 0 1 1.00 1 1 0 0 0
.................................................GGTCTAGAGGATTCAGGCA................................................................................... 19 0 1 1.00 1 0 0 1 0
...............................................................................................CAAAAGAGTCAAAGGATGGCAAAGACT............................. 27 0 1 1.00 1 1 0 0 0
.............................................................................................GACAAAAGAGTCAAAGGATGGCAAAGAC.............................. 28 0 1 1.00 1 1 0 0 0
....................................................................................TACAAAGGAGACAAAAGAGT............................................... 20 0 1 1.00 1 1 0 0 0
..................................GCACGCACTTCGGCTGGTCTAGAG............................................................................................. 24 0 1 1.00 1 1 0 0 0
........................................................................GACTACAAAGGATACAAAGG........................................................... 20 0 1 1.00 1 0 1 0 0
...........................................................ATTCAGGCAAGGAGACTACAAAGG.................................................................... 24 0 1 1.00 1 1 0 0 0
..........AGTCCAGCGGCTCCTAACATAGCT..................................................................................................................... 24 1 1 1.00 1 0 1 0 0
.....................................................................................ACAAAGGAGACAAAAGAGT............................................... 19 0 1 1.00 1 1 0 0 0
..................................GCACGCACTTCGGCTGGT................................................................................................... 18 0 1 1.00 1 0 0 1 0
.................................TGCACGCACTTCGGCTGGTCTAGAGG............................................................................................ 26 0 1 1.00 1 1 0 0 0
..................................CCACGCACTTCGGCTGGTCTAGAGG............................................................................................ 25 1 1 1.00 1 0 1 0 0
......................................................................................................GTCAAAGGATGGCAAAGA............................... 18 0 1 1.00 1 0 0 1 0
.....................................CGCACTTCGGCTGGTCTAGAG............................................................................................. 21 0 1 1.00 1 0 0 0 1
.............................................................TCAGGCAAGGAGACTACAAAG..................................................................... 21 0 1 1.00 1 1 0 0 0
.............................................................................................GACAAAAGAGTCAAAGGATGGC.................................... 22 0 1 1.00 1 0 1 0 0
........................................................AGGATTCAGGCAAGGAGACTA.......................................................................... 21 0 1 1.00 1 1 0 0 0
..............................................................................AAAGGATACAAAGGAGACAAAAGA................................................. 24 0 1 1.00 1 1 0 0 0
.........................................................................................................AAAGGATGGCAAAGACTTGC.......................... 20 0 1 1.00 1 0 1 0 0
....................................................CTAGAGGATTCAGGCAAGGAGACT........................................................................... 24 0 1 1.00 1 0 1 0 0
.......................................................................................TAAGGAGACATAAGAGTCA............................................. 19 2 3 0.67 2 0 2 0 0
.....................................................TAGAGGATTCAGGGACTGAGA............................................................................. 21 3 2 0.50 1 0 0 1 0
........................................................................................AAGGAGACATAAGAGTTA............................................. 18 2 20 0.20 4 0 4 0 0
........................................................................................AAGGCGACATAAGAGTCA............................................. 18 2 8 0.13 1 0 1 0 0
........................................................................................AAGGAGACATAAGAGTCCC............................................ 19 3 16 0.13 2 0 2 0 0
........................................................................................AAGGAGCCATAAGAGTCA............................................. 18 2 10 0.10 1 0 1 0 0
.............................TAGCTGCACGCATTACTGC....................................................................................................... 19 3 13 0.08 1 0 0 1 0

Anti-sense strand reads

ATGTTCAACGTCAGGTCGCCGACGATTGTATCGACGTGCGTGAAGCCGACCAGATCTCCTAAGTCCGTTCCTCTGATGTTTCCTATGTTTCCTCTGTTTTCTCAGTTTCCTACCGTTTCTGAACGTAGCTCGCCATTAAAGATCACAATAT
**************************************************((((..((..(((......)))..))................)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
.............................ATCGACGTGCGTAATGACG....................................................................................................... 19 3 13 0.31 4 4 0
.............................ATCGACGTGCGTAATGAC........................................................................................................ 18 3 20 0.30 6 6 0
.............................................................................................................CTACTGTTTCTGAACGGA........................ 18 2 10 0.10 1 1 0
.................................................................................................................CGGTTCTGAAAGTAGCTAG................... 19 3 20 0.05 1 1 0
..........TCAGGTCGCCTACCATCG........................................................................................................................... 18 3 20 0.05 1 0 1
..........................TCAATCGACGTGCGTAAAG.......................................................................................................... 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004909:5357714-5357864 - dwi_2726 TACA-------------------------------------------------AGTTGCAGTCCAGCGGCTG-------------------------------CTAACATAGCTGCAC---------------------------------------------------------------------------------------------------------GCACTTCGGC--------TGGTCTA---GAGGATTCAGGCAAGGAGACTACAAAGGATACAAAG-------GA---GACA---AAAGAGTCAAAGGATGGCAAAGACTTGCATCGAGCGGTAATTTCTAG----T----G---TTATA
droVir3 scaffold_12726:2025830-2025996 - CACCA-----CCA--GCACCAGCACCA-----GCAGCAGCAGCAGC-------AAC------------GT--------CGCATCCAAGCTCAGCTCGGC--------------TCCGCGCACT---GATGAA---------------------------------------------------------------------------------------------GTTTTGGC--------TGCAGTAGC-AG--AC-------------------------------------GTGCCCGCG---ACTGTCGGCAAGGATCCCAAGGATTTGCATCGTGCGGTGAGTCCCAGGTGGA--ATTA--ATATA
droMoj3 scaffold_6473:6446659-6446783 + CAGC-------------------------------------------------GTC------------GT--------CGCATCCAAGCTCAACTCGGC--------------GCTGCGCAAT---GACGAA---------------------------------------------------------------------------------------------GTCATCGC--------TGGCAGC---AAT----------------------------------------GCGCCGGCG---AAGGAGGGCAACAGCGGCAAGGACTTGCATCGCGCGGTAAGCTCCTG----A----GA-----AT
droGri2 scaffold_15203:992677-992891 - TACC-------------------------------------------------AGCAGCA-----------TCATAAGCGCCTCCAAGCTCAGTTCTGC--------------ACTGCGCAAC---GACGATGCTGTGTCCATCAGCAACAGTAGCAATGCAGCAGTCAATGCCGCCAAGGATGCCAAGGATACCAAGGATGCTA--------AGGATGCCAAGGATTCCAAGGAAGCCAAGGA---CGCCAAA----------------------------------------GA---T------------GGCAAGGACTGCAAGGACTTGCATCGCGCTGTGAGTTATAA-------------TTTTA
dp5 XL_group3a:251391-251486 - ACCG-------------------------------------------------CGCTGCA---------------------------------------CCTCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGACATGAAGGACGCCATCAAGGATCAAGT----C------------GCCAAGGATGCCAAGGATCTGCATCGTGCTGTAAGTGTCT---------------AAAA
droPer2 scaffold_39:482279-482379 + ACCG-------------------------------------------------CGCTGCA---------------------------------------CCTCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGACATGAAGGACGCCATCAAGGATCAAGT----C------------GTCAAGGATGCCAAGGATCTGCATCGTGCTGTAAGTGTCTA----G----AA--TATTC
droAna3 scaffold_13248:907219-907355 + GTCC-------------------------------------------------GGGTCCG--------------------GGTCCTGGTTCCATGTG-CTCTCCGGATGAGCCAACTC---CTCCAGCCA---------------------------------------------------------------------------------------------GGATTATGGC--------TGGAAAT---GAT----------------------------------------CTGCC---CCAGCAGCCAACCAAGGATGCCAAGGACTTGCATCGTGCTGTGAGTTT------------AA--TTTTT
droBip1 scf7180000396745:20126-20252 + CCAC-------------------------------------------------GGC-----------TTCCG---------------GCTCCACATG-CTCCCCAGATGAGCCAGCAC---CT---GGTA---------------------------------------------------------------------------------------------GGATTGTAGC--------TGGCAGT---GAT----------------------------------------CAGCC---ACAGCAGCCGGCCAAGGAAGCCAAGGATTTGCATCGAGCTGTGAGTTAT---------------ATATA
droKik1 scf7180000302696:1357329-1357444 - TACT-------------------------------------------------GGTTCCTCCTCGGTGGCAGCA-------------------------TCACCCGATGAGCCAGCGC---------------------------------------------------------------------------------------------------------GCTCGGTAGC--------CGGTACA---GAG----------------------------------------CA---AGTG---AAAGAGTCCAAGGATGCCAAGGATCTGCATCGTGCGGTAAGTCATT-------------------
droFic1 scf7180000453829:1342680-1342847 + CTCCA-----TTTCCGGTCCAGCTCCT-----GTTGCTGGTTCAGTGGGAACGGGCTCCTCCTCGGCGGCCGCC-------------------------TCGCCGGACGAACCGGCGC---------------------------------------------------------------------------------------------------------GAATTGTGGC--------CGGCAAC---GAG----------------------------------------CA---GGCC---AAGGAACCAAAGGACGCCAAGGATCTGCACCGCGCGGTAAGATTTTT----AAGATTT--AAATA
droRho1 scf7180000779985:1022875-1022996 - CACT-------------------------------------------------GGATACTCCTCGGTGGCAGCA-------------------------TCGCCGGATGAGCCGGCAC---------------------------------------------------------------------------------------------------------GCATTGTGGC--------GGGCACC---GAG----------------------------------------CA---G------------GCCAAGGACACCAAGGACTTGCATCGCGCCGTAAGACATGATCTCC--ATAT--TTATA
droBia1 scf7180000302432:970082-970199 + CACG-------------------------------------------------GGCACCTCCTCGGTGGCAGCA-------------------------TCGCCGGATGAGCCGGCTC---------------------------------------------------------------------------------------------------------GCATTGTCGC--------AGGCACC---GAG----------------------------------------CA---G------------GCCAAGGACTCCAAGGACTTGCACCGCGCCGTAAGCATTTG----C----TCATCGTTA
droEug1 scf7180000409528:467285-467385 - TAG------------------------------------------------------------------CAGCC-------------------------TCACCGGATGAGCCAGCAC---------------------------------------------------------------------------------------------------------GCCTTGTGGG--------CGGCAGT---GAG----------------------------------------CA---A------------GCTAAAGACAACAAGGATTTGCATCGAGCCGTAAGACATGA----T----TATCTTATA
dm3 chrX:18285013-18285119 - CATC------------------------------------------------------------GGTGGCTGCC-------------------------TCGCCGGATGAGCCGGCTC---------------------------------------------------------------------------------------------------------GCATTTTGGC--------GGGCACCGCCGAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTTGCATCGCGCAGTAAGTACTTG----C----C---AACTA
droSim2 x:17382645-17382814 - AACTGATATATTTTAGGTTGGGCCAATCCTCAGCTTATGTCCTATTGCAAATGGAATCAC--------------------------------------------------------AC------------------------------------------------------------------------ACCCTGGGGGTCCTAGTAAAAAGAAAGTACTGTGCATTTTGGC--------GGGCACTGCCGAG----------------------------------------CA---C------------GTTAAGGACTCCAAGGACTTGCATCGCGCAGTAAGTCCTTG----C----CA--AACTA
droSec2 scaffold_8:594391-594498 - CATC------------------------------------------------------------GGTGGCTGCC-------------------------TCGCCGGATGAGTCGGCTC---------------------------------------------------------------------------------------------------------GCATTTTGGC--------AGGCACCGCCGAG----------------------------------------CA---C------------GTTAAGGACTCCAAGGACTTGCATCGCGCAGTAAGTCCTTG----C----CA--AACTA
droYak3 X:16913114-16913216 - CATC------------------------------------------------------------GGTGGCCACA-------------------------TCGCCGGATGACTCGGCAC---------------------------------------------------------------------------------------------------------GCATTGTGGC--------GGGCACC---GAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTTGCATCGCGCTGTAAGTCCTTT----G--------ATTAA
droEre2 scaffold_4690:8605516-8605622 - CATC------------------------------------------------------------GGTGGCAGCA-------------------------TCGCCGGATGAGGCGGTGC---------------------------------------------------------------------------------------------------------GCATTGTGGC--------GGGCACC---GAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTTGCATCGCGCCGTAAGTTCTCG----C----TTAACTATA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TACA-------------------------------------------------AGTTGCAGTCCAGCGGCTG-------------------------------CTAACATAGCTGCAC---------------------------------------------------------------------------------------------------------GCACTTCGGC--------TGGTCTA---GAGGATTCAGGCAAGGAGACTACAAAGGATACAAAG-------GA---GACA---AAAGAGTCAAAGGATGGCAAAGACTTGCATCGAGCGGTAATTTCTAG----T----G---TTATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................GACA---AAAGAGTCAAAGGATGGCAAAGA..........................................2714.00400400
............................................................................................................................................................................................................................................................................GACTACAAAGGATACAAAG-------GA---GAC.....................................................................2413.00300210
......................................................GTTGCAGTCCAGCGGCTG-------------------------------............................................................................................................................................................................................................................................................................1813.00330000
............................................................................................................................................................................................................................................................................GACTACAAAGGATACAAAG-------GA---GA......................................................................2312.00200200
...........................................................AGTCCAGCGGCTG-------------------------------CTAACATAGCT.................................................................................................................................................................................................................................................................2412.00200110
................................................................................................................................................................................................................................................................................ACAAAGGATACAAAG-------GA---GACA---AAAGA............................................................2611.00100100
............................................................GTCCAGCGGCTG-------------------------------CTAACATAGCT.................................................................................................................................................................................................................................................................2311.00100100
.................................................................................................................................................................................................................................................TGGTCTA---GAGGATTCAGGCAAGGA.......................................................................................................2411.00100100
...............................................................................................................GCTGCAC---------------------------------------------------------------------------------------------------------GCACTTCGGC--------TGGT..............................................................................................................................2111.00101000
.............................................................................................................................................................................................................................................................................................................CA---AAAGAGTCAAAGGATGG................................................1911.00100100
........................................................................................................................................................................................................................................................................................................................TCAAAGGATGGCAAAGACTTGC.....................................2211.00100100
..............................................................................................................................................................................................................................................................................CTACAAAGGATACAAAG-------GA---GACA---AAAGA............................................................2811.00100100
.......................................................................................................................................................................................................................................................................................ATACAAAG-------GA---GACA---AAAGA............................................................1911.00100100
..............................................................................................................................................................................................................................................................................CTACAAAGGATACAAAG-------GA---GACA---.................................................................2311.00100100
..................................................................................................................................................................................................................................................GGTCTA---GAGGATTCAGGCA...........................................................................................................1911.00101000
.............................................................................................................................................................................................................................................................................................................CA---AAAGAGTCAAAGGATGGCAAAGACT........................................2711.00100100
...........................................................................................................................................................................................................................................................................................................GACA---AAAGAGTCAAAGGATGGCAAAGAC.........................................2811.00100100
........................................................................................................................................................................................................................................................................................TACAAAG-------GA---GACA---AAAGAGT..........................................................2011.00100100
..................................................................................................................GCAC---------------------------------------------------------------------------------------------------------GCACTTCGGC--------TGGTCTA---GAG.....................................................................................................................2411.00100100
............................................................................................................................................................................................................................................................................GACTACAAAGGATACAAAG-------G............................................................................2011.00100010
...............................................................................................................................................................................................................................................................ATTCAGGCAAGGAGACTACAAAGG............................................................................................2411.00100100
.........................................................................................................................................................................................................................................................................................ACAAAG-------GA---GACA---AAAGAGT..........................................................1911.00100100
..................................................................................................................GCAC---------------------------------------------------------------------------------------------------------GCACTTCGGC--------TGGT..............................................................................................................................1811.00101000
.................................................................................................................TGCAC---------------------------------------------------------------------------------------------------------GCACTTCGGC--------TGGTCTA---GAGG....................................................................................................................2611.00100100
.......................................................................................................................................................................................................................................................................................................................GTCAAAGGATGGCAAAGA..........................................1811.00101000
.....................................................................................................................C---------------------------------------------------------------------------------------------------------GCACTTCGGC--------TGGTCTA---GAG.....................................................................................................................2111.00110000
.................................................................................................................................................................................................................................................................TCAGGCAAGGAGACTACAAAG.............................................................................................2111.00100100
...........................................................................................................................................................................................................................................................................................................GACA---AAAGAGTCAAAGGATGGC...............................................2211.00100010
............................................................................................................................................................................................................................................................AGGATTCAGGCAAGGAGACTA..................................................................................................2111.00100100
..................................................................................................................................................................................................................................................................................AAAGGATACAAAG-------GA---GACA---AAAGA............................................................2411.00100100
..........................................................................................................................................................................................................................................................................................................................AAAGGATGGCAAAGACTTGC.....................................2011.00100010
.....................................................................................................................................................................................................................................................CTA---GAGGATTCAGGCAAGGAGACT...................................................................................................2411.00100010
droVir3
CACCA-----CCA--GCACCAGCACCA-----GCAGCAGCAGCAGC-------AAC------------GT--------CGCATCCAAGCTCAGCTCGGC--------------TCCGCGCACT---GATGAA---------------------------------------------------------------------------------------------GTTTTGGC--------TGCAGTAGC-AG--AC-------------------------------------GTGCCCGCG---ACTGTCGGCAAGGATCCCAAGGATTTGCATCGTGCGGTGAGTCCCAGGTGGA--ATTA--ATATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................GCAGTAGC-AG--AC-------------------------------------GTGCCCGCG---ACT..............................................................2412.002001000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AAGGATTTGCATCGTGCGA............................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ACT---GATGAA---------------------------------------------------------------------------------------------GTTTTGGC--------T.................................................................................................................................1811.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................CGGC--------------TCCGCGCACT---GATGAA---------------------------------------------------------------------------------------------GT................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CTGTCGGCAAGGATCCCAAGG...........................................2111.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................TAGC-AG--AC-------------------------------------GTGCCCGCG---ACTGTCGGCAA......................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AGC-AG--AC-------------------------------------GTGCCCGCG---ACT..............................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGTAGC-AG--AC-------------------------------------GTGCCCGCG---AC...............................................................2111.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................GCATCCAAGCTCAGCTCGGC--------------TCC...............................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................GCTCAGCTCGGC--------------TCCGCGCACT---GATGAA---------------------------------------------------------------------------------------------..................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................GCTCAGCTCGGC--------------TCCGCGC...........................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CGCG---ACTGTCGGCAAGGATCCC...............................................2211.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GAA---------------------------------------------------------------------------------------------GTTTTGGC--------TGCAGTAGC-........................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.................................................................................ATCCAAGCTCAGCTCGGC--------------TC................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TGGC--------TGCAGTAGC-AG--AC-------------------------------------GTGCCCGCG---ACT..............................................................2911.001100000000000000000000000000000000000000000000000000000000000000
.........................................GCAGC-------AAC------------GT--------CGCATCCAAGCTCAGCTC...................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GTCGGCAAGGATCCCAAGGATTTGCAT...................................2711.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................GCTCAGCTCGGC--------------TCCGCGCACT---GAT..................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................GCG---ACTGTCGGCAAGGATCCCAAG............................................2411.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................GGC--------------TCCGCGCACT---GATGAA---------------------------------------------------------------------------------------------..................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCCCAAGGATTTGCATCGTGC..............................2111.001000000000000000000000000000000001000000000000000000000000000000
..................................................................................................C--------------TCCGCGCACT---GATGAA---------------------------------------------------------------------------------------------GTT...............................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..................................AGCAGCAGCAGC-------AAC------------GT--------CGC..................................................................................................................................................................................................................................................................................................2020.501000000000000000000000000000000000000000000000000000000000000010
.....................................AGCAGCAGC-------AAC------------GT--------CGC..................................................................................................................................................................................................................................................................................................1720.501000000000000000000000000000000000000000000000000000000010000000
................................GCAGCAGCAGCAGC-------AAC------------GT--------CG...................................................................................................................................................................................................................................................................................................2130.331000000000000010000000000000000000000000000000000000000000000000
...CA-----CCA--GCACCAGCACCA-----GCAGC..............................................................................................................................................................................................................................................................................................................................................22100.101001000000000000000000000000000000000000000000000000000000000000
....................AGCACCA-----GCAGCAGCAGCAGC-------AA............................................................................................................................................................................................................................................................................................................................23160.061001000000000000000000000000000000000000000000000000000000000000
.................ACCAGCACCA-----GCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................21180.061000000000000000000000000000000010000000000000000000000000000000
................CACCAGCACCA-----GCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
................CACCAGCACCA-----GCAGCA.............................................................................................................................................................................................................................................................................................................................................17200.051000000000000000000000000000000000000000000000000000001000000000
..................CCAGCACCA-----GCAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
droMoj3
CAGC-------------------------------------------------GTC------------GT--------CGCATCCAAGCTCAACTCGGC--------------GCTGCGCAAT---GACGAA---------------------------------------------------------------------------------------------GTCATCGC--------TGGCAGC---AAT----------------------------------------GCGCCGGCG---AAGGAGGGCAACAGCGGCAAGGACTTGCATCGCGCGGTAAGCTCCTG----A----GA-----ATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................AACAGCGGCAAGGACTTG......................................1812.002200000
......................................................................................................................................................................................................................................................................................................................AGGGCAACAGCGGCAAGGA..........................................1911.001001000
..............................................................................................................................GACGAA---------------------------------------------------------------------------------------------GTCATCGC--------TGGCAGC---AAT----------------------------------------GC...........................................................................2611.001100000
...............................................................................................................................ACGAA---------------------------------------------------------------------------------------------GTCATCGC--------TGGCAGC---A.......................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................GCGCCGGCG---AAGGAGGGCA.......................................................1911.001100000
..........................................................................................................................................................................................................................................................................................................................CAACAGCGGCAAGGACTTG......................................1911.001100000
........................................................................................................................................................................................................................................................................................................GCCGGCG---AAGGAGGGCAACA....................................................2011.001001000
..................................................................................................................................................................................................................................................................................................................AAGGAGGGCAACAGCGGCAAGGACT........................................2511.001000001
.................................................................................................................................................................................................................................................................................................................................GGCAAGGACTTGCATCGC................................1811.001100000
.................................................................................ATCCAAGCTCAACTCGGC--------------GCTGCGC...........................................................................................................................................................................................................................................................2511.001000001
droGri2
TACC-------------------------------------------------AGCAGCA-----------TCATAAGCGCCTCCAAGCTCAGTTCTGC--------------ACTGCGCAAC---GACGATGCTGTGTCCATCAGCAACAGTAGCAATGCAGCAGTCAATGCCGCCAAGGATGCCAAGGATACCAAGGATGCTA--------AGGATGCCAAGGATTCCAAGGAAGCCAAGGA---CGCCAAA----------------------------------------GA---T------------GGCAAGGACTGCAAGGACTTGCATCGCGCTGTGAGTTATAA-------------TTTTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................GCAGCA-----------TCATAAGCGCCTCCAA............................................................................................................................................................................................................................................................................................2212.00220
................................................................................................................................................................................................................................GATTCCAAGGAAGCCAAGGA---CGCCA.......................................................................................................................2511.00101
..........................................................................................................................................................................................................CTA--------AGGATGCCAAGGATTCCAAGGA........................................................................................................................................2511.00110
............................................................................................................................................................................................................A--------AGGATGCCAAGGATTCCAAGGAAG......................................................................................................................................2511.00101
.................................................................................................................................................................AGCAGTCAATGCCGCCAAGGATG...........................................................................................................................................................................................2311.00110
.........................................................................................................................................................................................................................................................................................................................GCAAGGACTGCAAGGACTTG......................................2011.00110
..................................................................................................................................................................................................CAAGGATGCTA--------AGGATGCCAAG...................................................................................................................................................2211.00101
..CC-------------------------------------------------AGCAGCA-----------TCATAAGCGCCTCCA.............................................................................................................................................................................................................................................................................................2411.00110
.......................................................................................................................................................................................................................................................................................................A---T------------GGCAAGGACTGCAAGGA..........................................1911.00110
............................................................................................................................................................................................................................................GCCAAGGA---CGCCAAA----------------------------------------GA---T------------G..........................................................1911.00101
dp5
ACCG-------------------------------------------------CGCTGCA---------------------------------------CCTCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGACATGAAGGACGCCATCAAGGATCAAGT----C------------GCCAAGGATGCCAAGGATCTGCATCGTGCTGTAAGTGTCT---------------AAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................CAAGT----C------------GCCAAGGATGCCAAGGAT.........................................2412.0020200000000
.................................................................................................................................................................................................................................................................................................TCAAGT----C------------GCCAAGGATGCCAAGGATC........................................2612.0020200000000
......................................................................................................................................................................................................................................................................................GCCATCAAGGATCAAGT----C------------GCCAAG.....................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................GT----C------------GCCAAGGATGCCAAGG...........................................1911.0010100000000
............................................................................................................................................................................................................................................................................CATGAAGGACGCCATCAAGG...................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................T----C------------GCCAAGGATGCCAAGGATCTG......................................2311.0010100000000
..................................................................................................................................................................................................................................................................................GGACGCCATCAAGGATCAAGT----........................................................................2111.0010000010000
..........................................................................................................................................................................................................................................................................GACATGAAGGACGCCATCAAGGATCA...............................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................................AATGACATGAAGGACGCCAT........................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................GCCAAGGATCTGCATCGTG...............................1911.0010100000000
...............................................................................................................................................................................................................................................................................................GATCAAGT----C------------GCCAAGGATGC................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................CCAAGGATGCCAAGGATCTGCT....................................2221.0020110000000
...............................................................................................................................................................................................................................................................................................GATCAAGT----C------------GCCAAGGATG.................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................CCAAGGATGCCAAGGATCTGC.....................................2111.0010100000000
..........................................................CA---------------------------------------CCTCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGACATGAAGG...............................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................ATCAAGT----C------------GCCAAGGATGCCAAGGAT.........................................2611.0010100000000
.......................................................................................................................................................................................................................................................................................CCATCAAGGATCAAGT----C------------GCCAAGGA...................................................2511.0010100000000
...................................................................................................................................................................................................................................................................................................AAGT----C------------GCCAAGGATGCCAAGGATCTGC.....................................2711.0010100000000
......................................................................................................................................................................................................................................................................................GCCATCAAGGATCAAGT----C------------GCC........................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................AATGACATGAAGGACGCCATCAAG....................................................................................2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................CAAGGATGCCAAGGATCTGCT....................................2120.5010000100000
............................................................................................................................................................................................................................................................................................................................AGGATGCCAAGGATCTGC.....................................1830.3310100000000
droPer2
ACCG-------------------------------------------------CGCTGCA---------------------------------------CCTCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGACATGAAGGACGCCATCAAGGATCAAGT----C------------GTCAAGGATGCCAAGGATCTGCATCGTGCTGTAAGTGTCTA----G----AA--TATTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................ATCAAGT----C------------GTCAAGGATGCCAAGGATCT.......................................2812.002200000
.....................................................................................................TCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGACATGAAGGACGCCATC.......................................................................................2711.001000010
...........................................................................................................................................................................................................................................................................................CAAGGATCAAGT----C------------GTCAAGGAT..................................................2211.001100000
.........................................................................................................................................................................................................................................................................................ATCAAGGATCAAGT----C------------GTCAAGGAT..................................................2411.001100000
..........................................................................................................................................................................................................................................................................................................................CAAGGATGCCAAGGATCT.......................................1821.002200000
..........................................................................................................................................................................................................................................................................GACATGAAGGACGCCATCAAGGATCAAG.............................................................................2811.001000001
................................................................................................................................................................................................................................................................................................ATCAAGT----C------------GTCAAGGATGCCAAGGATCC.......................................2811.001100000
droAna3
GTCC-------------------------------------------------GGGTCCG--------------------GGTCCTGGTTCCATGTG-CTCTCCGGATGAGCCAACTC---CTCCAGCCA---------------------------------------------------------------------------------------------GGATTATGGC--------TGGAAAT---GAT----------------------------------------CTGCC---CCAGCAGCCAACCAAGGATGCCAAGGACTTGCATCGTGCTGTGAGTTT------------AA--TTTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................ATGGC--------TGGAAAT---GAT----------------------------------------CTG..........................................................................1811.001100000
......................................................................................................................................................................................................................................................AT---GAT----------------------------------------CTGCC---CCAGCAGCC............................................................1911.001100000
.................................................................................................................................................................................................................................ATTATGGC--------TGGAAAT---GAT----------------------------------------CTG..........................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................GCCAAGGACTTGCATCGTGCTAG...........................2311.001000001
....................................................................................................................................................................................................................................ATGGC--------TGGAAAT---GAT----------------------------------------CTGCC---C....................................................................2111.001100000
.....................................................................................................TCCGGATGAGCCAACTC---CTCCA.....................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................................................AAAT---GAT----------------------------------------CTGCC---CCAGCAGCC............................................................2111.001100000
.........................................................CCG--------------------GGTCCTGGTTCCATGTG-C................................................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................CCAACTC---CTCCAGCCA---------------------------------------------------------------------------------------------GGATT...............................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................AGGATGCCAAGGACTTGC.....................................1811.001001000
...................................................................................................................................................................................................................................................GAAAT---GAT----------------------------------------CTGCC---CCAGCAGC.............................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................ATGCCAAGGACTTGCATCGTGC..............................2211.001000010
GTCC-------------------------------------------------GGGTCCG--------------------GGTCCTGGTTCCATG....................................................................................................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................................................................................................................................GCCAAGGACTTGCATCGTGC..............................2011.001100000
.......................................................................................GTTCCATGTG-CTCTCCGGATGAGC...................................................................................................................................................................................................................................................................2411.001000010
....................................................................................................................................................................................................................................................................................................................GCCAACCAAGGATGCCAAGGA..........................................2111.001100000
......................................................................................................................................................................................................................................................................................................................CAACCAAGGATGCCAAGGACT........................................2111.001100000
....................................................................................CTGGTTCCATGTG-CTCTCCGGATGAGC...................................................................................................................................................................................................................................................................2711.001000010
............................................................................................................................................................................................................................................................................................................................AGGATGCCAAGGACTTGCATCGTGCT.............................2611.001000001
...................................................................................................................................................................................................................................................................................................................AGCCAACCAAGGATGCCAAGGACT........................................2411.001010000
droBip1
CCAC-------------------------------------------------GGC-----------TTCCG---------------GCTCCACATG-CTCCCCAGATGAGCCAGCAC---CT---GGTA---------------------------------------------------------------------------------------------GGATTGTAGC--------TGGCAGT---GAT----------------------------------------CAGCC---ACAGCAGCCGGCCAAGGAAGCCAAGGATTTGCATCGAGCTGTGAGTTAT---------------ATATASizeHit CountTotal NormTotal
No Reads
droKik1
TACT-------------------------------------------------GGTTCCTCCTCGGTGGCAGCA-------------------------TCACCCGATGAGCCAGCGC---------------------------------------------------------------------------------------------------------GCTCGGTAGC--------CGGTACA---GAG----------------------------------------CA---AGTG---AAAGAGTCCAAGGATGCCAAGGATCTGCATCGTGCGGTAAGTCATT-------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTCCA-----TTTCCGGTCCAGCTCCT-----GTTGCTGGTTCAGTGGGAACGGGCTCCTCCTCGGCGGCCGCC-------------------------TCGCCGGACGAACCGGCGC---------------------------------------------------------------------------------------------------------GAATTGTGGC--------CGGCAAC---GAG----------------------------------------CA---GGCC---AAGGAACCAAAGGACGCCAAGGATCTGCACCGCGCGGTAAGATTTTT----AAGATTT--AAATASizeHit CountTotal NormTotal
No Reads
droRho1
CACT-------------------------------------------------GGATACTCCTCGGTGGCAGCA-------------------------TCGCCGGATGAGCCGGCAC---------------------------------------------------------------------------------------------------------GCATTGTGGC--------GGGCACC---GAG----------------------------------------CA---G------------GCCAAGGACACCAAGGACTTGCATCGCGCCGTAAGACATGATCTCC--ATAT--TTATASizeHit CountTotal NormTotal
No Reads
droBia1
CACG-------------------------------------------------GGCACCTCCTCGGTGGCAGCA-------------------------TCGCCGGATGAGCCGGCTC---------------------------------------------------------------------------------------------------------GCATTGTCGC--------AGGCACC---GAG----------------------------------------CA---G------------GCCAAGGACTCCAAGGACTTGCACCGCGCCGTAAGCATTTG----C----TCATCGTTASizeHit CountTotal NormTotal
No Reads
droEug1
TAG------------------------------------------------------------------CAGCC-------------------------TCACCGGATGAGCCAGCAC---------------------------------------------------------------------------------------------------------GCCTTGTGGG--------CGGCAGT---GAG----------------------------------------CA---A------------GCTAAAGACAACAAGGATTTGCATCGAGCCGTAAGACATGA----T----TATCTTATASizeHit CountTotal NormTotal
No Reads
dm3
CATC------------------------------------------------------------GGTGGCTGCC-------------------------TCGCCGGATGAGCCGGCTC---------------------------------------------------------------------------------------------------------GCATTTTGGC--------GGGCACCGCCGAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTTGCATCGCGCAGTAAGTACTTG----C----C---AACTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................GAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACT........................................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000020500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GCCGAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGAC.........................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GCCGAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACT........................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TC---------------------------------------------------------------------------------------------------------GCATTTTGGC--------GGGCACCGCCGAG----------------------------------------.............................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................CTGCC-------------------------TCGCCGGATGAGCC..................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GGTGGCTGCC-------------------------TCGCCGGATGAGCCG.................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
..................................................................TGGCTGCC-------------------------TCGCCGGATGAGCCGGCTC---------------------------------------------------------------------------------------------------------G...................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TGCC-------------------------TCGCCGGATGAGCC..................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................A---C------------GTTAAGGACCCCAAGGAC.........................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CACCGCCGAG----------------------------------------CA---C------------GTTAAGGACCCCAA.............................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TC------------------------------------------------------------GGTGGCTGCC-------------------------TCGCCGGATGAG....................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CGAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGA..........................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGGCTGCC-------------------------TCGCCGGATGAGC...................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000
..................................................................................................................................................................................................................................................................................................................................CCAAGGACTTGCATCGCGC..............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................TGGC--------GGGCACCGCCGAG----------------------------------------CA---C------------GTTAAGG....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GTTAAGGACCCCAAGGACTTG......................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATC------------------------------------------------------------GGTGGCTGCC-------------------------TCGCCGGATGA.....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TAAGGACCCCAAGGACTTGCATC..................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AGCCGGCTC---------------------------------------------------------------------------------------------------------GCATTTTGGC--------..................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GCC-------------------------TCGCCGGATGAGCCGGCTC---------------------------------------------------------------------------------------------------------G...................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CA---C------------GTTAAGGACCCCAAGGACTTGCA....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CATTTTGGC--------GGGCACCGCCGAG----------------------------------------C............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GGCACCGCCGAG----------------------------------------CA---C------------GTTAG......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CACCGCCGAG----------------------------------------CA---C------------GTTAAGGACCCCAAG............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...........................................................................................................................................................................................................................................................GAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTTG......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CC-------------------------TCGCCGGATGAGCCG.................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GGCTGCC-------------------------TCGCCGGATGAGC...................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................................................................................................................................................................................................................................................CCCAAGGACTTGCATCGCGC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TGGC--------GGGCACCGCCGAG----------------------------------------CA---C------------GTT........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................................................................CTGCC-------------------------TCGCCGGATGAGCCG.................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................GACCCCAAGGACTTGCATCGCGC..............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................GGCTGCC-------------------------TCGCCGGATGAG....................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..........................................................................................................ATGAGCCGGCTC---------------------------------------------------------------------------------------------------------GCATTT..............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CAAGGACTTGCATCGCGC..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AAGGACTTGCATCGCGCA.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..TC------------------------------------------------------------GGTGGCTGCC-------------------------TCGCCGGATGAGCCC.................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TAAGGACCCCAAGGACTTGCG....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CGCCGAG----------------------------------------CA---C------------GTTAAGGACCCCA..............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ACCCCAAGGACTTGCATCGCGCAAGC..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTTGGC--------GGGCACCGCCGAG----------------------------------------CA---........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................G----------------------------------------CA---C------------GTTAAGGACCCCAAGGACT........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TTAAGGACCCCAAGGACTTGCATCGCGC..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CAAGGACTTGCATCGCGCA.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..TC------------------------------------------------------------GGTGGCTGCC-------------------------TCGCCGGATGAGCC..................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................................................TTAAGGACCCCAAGGACTTGCATCGC................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................ACCCCAAGGACTTGCATCGC................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................GTGGCTGCC-------------------------TCGCCGGATG......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TAAGGACCCCAAGGACTTGC.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AACTGATATATTTTAGGTTGGGCCAATCCTCAGCTTATGTCCTATTGCAAATGGAATCAC--------------------------------------------------------AC------------------------------------------------------------------------ACCCTGGGGGTCCTAGTAAAAAGAAAGTACTGTGCATTTTGGC--------GGGCACTGCCGAG----------------------------------------CA---C------------GTTAAGGACTCCAAGGACTTGCATCGCGCAGTAAGTCCTTG----C----CA--AACTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................AG----------------------------------------CA---C------------GTTAAGGACTCCAAGGACT........................................2412.00202000000000000000
...........................................................................................................................................................................................................................................................................................................C------------GTTAAGGACTCCAAGGACTT.......................................2112.00200200000000000000
.............................................................................................................................................................................................................................................................G----------------------------------------CA---C------------GTTAAGGACTCCAAGGACT........................................2311.00101000000000000000
............................................................................................................................................................................................................................................................................................................................AGGACTCCAAGGACTTGCATCG.................................2211.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................AAGGACTCCAAGGACTTGCATC..................................2211.00110000000000000000
.......................................................................................................................................................................................................................................................TGCCGAG----------------------------------------CA---C------------GTTAAGGA...................................................1811.00100000000000100000
.......................................................................................................................................................................................................................................................................................................A---C------------GTTAAGGACTCCAAGGACT........................................2111.00100100000000000000
..........................................................................................................................................................................................................................................................CGAG----------------------------------------CA---C------------GTTAAGGACTCCAAGGACT........................................2611.00100100000000000000
droSec2
CATC------------------------------------------------------------GGTGGCTGCC-------------------------TCGCCGGATGAGTCGGCTC---------------------------------------------------------------------------------------------------------GCATTTTGGC--------AGGCACCGCCGAG----------------------------------------CA---C------------GTTAAGGACTCCAAGGACTTGCATCGCGCAGTAAGTCCTTG----C----CA--AACTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................AAGGACTCCAAGGACTTGCAT...................................2111.0011000
........................................................................................................................................................................................................................................................................................................................GTTAAGGACTCCAAGGACTT.......................................2011.0010010
.......................................................................................................................................................................................................................................................................................................A---C------------GTTAAGGACTCCAAGGACT........................................2111.0010001
droYak3
CATC------------------------------------------------------------GGTGGCCACA-------------------------TCGCCGGATGACTCGGCAC---------------------------------------------------------------------------------------------------------GCATTGTGGC--------GGGCACC---GAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTTGCATCGCGCTGTAAGTCCTTT----G--------ATTAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................AAGGACCCCAAGGACTTGCATC..................................2212.00220000000000
.....................................................................................................................................................................................................................................................ACC---GAG----------------------------------------CA---C------------GTTAAGGACCCCAA.............................................2311.00101000000000
...............................................................................................................................................................................................................................................................................................................................ACCCCAAGGACTTGCATC..................................1811.00110000000000
........................................................................................................................................................................................................................................................................................................................GTTAAGGACCCCAAGGACTT.......................................2011.00110000000000
............................................................................................................................................................................................................................................................................................................................AGGACCCCAAGGACTTGCATCGCGCTA............................2711.00100000010000
................................................................................................................................................................................................................................................................................................................................CCCCAAGGACTTGCATCGCG...............................2011.00101000000000
.........................................................................................................GATGACTCGGCAC---------------------------------------------------------------------------------------------------------GCATTGTGG...........................................................................................................................................2211.00101000000000
.............................................................................................................................................................................................................................................................G----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTT.......................................2411.00100000010000
..........................................................................................................ATGACTCGGCAC---------------------------------------------------------------------------------------------------------GCATTGT.............................................................................................................................................1911.00100000010000
.....................................................................CCACA-------------------------TCGCCGGATGACTCGGC...............................................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................................................................................................................................................................................................................TTAAGGACCCCAAGGACTTGCATCGC................................2611.00110000000000
..........................................................................................................................................................................................................................................................................................................................TAAGGACCCCAAGGACTTGCATC..................................2311.00100100000000
............................................................................................................GACTCGGCAC---------------------------------------------------------------------------------------------------------GCATTGTGGC--------..................................................................................................................................2011.00101000000000
droEre2
CATC------------------------------------------------------------GGTGGCAGCA-------------------------TCGCCGGATGAGGCGGTGC---------------------------------------------------------------------------------------------------------GCATTGTGGC--------GGGCACC---GAG----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTTGCATCGCGCCGTAAGTTCTCG----C----TTAACTATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................CAGCA-------------------------TCGCCGGATGAGGCG.................................................................................................................................................................................................................................................................2011.0010000010
....................................................................................................................................................................................................................................GTGGC--------GGGCACC---GAG----------------------------------------CA---C------------GTTAAGGA...................................................2611.0010000100
.......................................................................................................................................................................................................................................................................................................A---C------------GTTAAGGACCCCAAGGACTTGC.....................................2411.0010000010
.............................................................................................................................................................................................................................................................G----------------------------------------CA---C------------GTTAAGGACCCCAAGGACTTGC.....................................2611.0010000010
................................................................GGTGGCAGCA-------------------------TCGCCGGATGAG....................................................................................................................................................................................................................................................................2211.0010000010

Generated: 05/18/2015 at 05:08 AM