dwi_2681

Name	Class	Family	Strand
Helitron-1_DVir	RC	Helitron	-

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TAACTTTTTAGTTGATTTTGAATTTGATCTCATTATATATGTATTTTGCTATACCATGCTAATGTCTTAGGATCGCGAAAATCAATGTAACATGCAGGAGAAAGTCTTCCTGATCCCATAGGGTTTATGTATTCTTGATCAGCATCACAAGATCATTAGTTTTAATTATTTCCTTTTTTCTTTTGGTTTTTATTTACATAGATCTGTTGTCCACGTGAACAGAACGCTTTACCCATATTAGCTCCACGTAT ************************************************.......(((((((((((..(((.((....(((((....(((((((((((......))))))..(((...)))..)))))....)))))..)))))..)))).))))))).........................................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M020 head	V118 embryo
......................................................................................................................................................................................................................GTGAACAGAACGCTTTACC..................	19	0	1	1.00	1	1	0
................................................................................................................................................................................................TTTGCATAGAGCGGTTGTCC.......................................	20	3	4	0.25	1	0	1
............TAATTTTGAATTTGATCACA...........................................................................................................................................................................................................................	20	2	10	0.10	1	0	1
.................................................................................................GTGAGATTCTTCCTGATCC.......................................................................................................................................	19	3	20	0.10	2	2	0
.....................................................................................TACAACTTGCAGGAGAAAGT..................................................................................................................................................	20	3	16	0.06	1	0	1
................................................................CCTTAGGATCGAGAAAAAC........................................................................................................................................................................	19	3	20	0.05	1	0	1

ATTGAAAAATCAACTAAAACTTAAACTAGAGTAATATATACATAAAACGATATGGTACGATTACAGAATCCTAGCGCTTTTAGTTACATTGTACGTCCTCTTTCAGAAGGACTAGGGTATCCCAAATACATAAGAACTAGTCGTAGTGTTCTAGTAATCAAAATTAATAAAGGAAAAAAGAAAACCAAAAATAAATGTATCTAGACAACAGGTGCACTTGTCTTGCGAAATGGGTATAATCGAGGTGCATA ************************************************.......(((((((((((..(((.((....(((((....(((((((((((......))))))..(((...)))..)))))....)))))..)))))..)))).))))))).........................................************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M045 female body	V118 embryo	V117 male body	M020 head
.................................................................................................................AGGGTATTCCAAGTACAAAA......................................................................................................................	20	3	20	1.60	32	17	15	0	0
..............................................ACAATAGGGTACGATTACA..........................................................................................................................................................................................	19	2	4	0.25	1	0	0	1	0
.....................................................................................................................................................................................................CATCAAGACAACAGGTGC....................................	18	2	5	0.20	1	0	0	0	1
..............................................ACAATAGGGTACGATTACAT.........................................................................................................................................................................................	20	3	18	0.06	1	1	0	0	0
....................................................................................................................................................................TAAGAAAGGAAAAAAGAA.....................................................................	18	1	20	0.05	1	0	0	1	0

Species	Coordinate	ID	Alignment
droWil2	scf2_1100000004909:3155896-3156146 -	dwi_2681	TAACTTTTTAG-----------------------TT------------------GATTTT-----------GAAT-----------------------------------TTGAT---------CTCATTATATATGTATTTTGC---------------T----A--TACCATGC--TAATGTCTTAGGATCGCGA-AA-------ATCAATGTAACATGCAGGAGAAAGTCTTCCTGATCCCATAGGGTTTATGTATTCTTGATCAGCATCACAAGATCATTAGTTTTAATTATTTCCTTTTTTCTTTTGGTTTTTAT--------------T----TACATAGATCTG--------TT-GT-CCACGT---GAA--------------------------CAGA-ACGCTTTACCCATATTAGCTCCACGTAT
droVir3	scaffold_12970:7744409-7744645 -		AACTTTTTGGA------------------------------------------------------------------------------------------------------------------TGATTATA----------------CCCTGAACCCATTAAAAATGGGTATAC--GGGTATATTGTATTTGTGC-AAAATCCAAATGTATGTAACAGGCAGAAGGAGGCATCTCCGACCCCATAAAGTATATATATTATTGATCAGCATTAATAGCTGAGTCGATCTAGCCATGTCCATCTGTCCGTCCGTCCGTAT--------------G----TATGAACGCCTG--------TTACAAACATAT---GCA--------------------------CAAATACATTATACCCTTTTTA-----------
droMoj3	scaffold_6366:1385-1609 +		TAATCTTTTGA-----------------------T----------------------TT------------------------------------------------------TA---------CTTTTTATA----------------CCCTGAACCCATATTCAATGGGAA-ATCAGGGTATAATGGTTTTGTTG-AA-------ATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGGGCGACGAGCTGAGTTGATTTGGCCCTGTCCGTCTGTCTGTCCGTCTGTCC--------------GTCCGTCCGTCTGTCCGTCTGTCCGTATGTA-----T---GAACG------------------------C--------------------------------
droGri2	scaffold_15245:15339049-15339226 +		T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGC-AA-------ATGTATGTAACAGGCAGACGGAGGCATCTCTGACCCCATAGAGTATATATATTCTTGATCAGGATCAACAGCCGGGCTCATATAGCCATGTCCGTCCGTCCGTCTGTCTGTAT--------------T--------------------------GACA-----CGCA-GA--------TCTCAGATACTATAAGAGCTAG-AGACTT----CAAATTAGGTTCTCGTAT
dp5	4_group3:6184686-6184866 -		AGACTTTTTGT-----------------------T------------------------------------------------------------------------------------------TAATTATA----------------CCCGATACTCAA----AATGAGTATTG--GGGTATATTAGATTTGTGG-TAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCCGTCTGTCCGTCCTTATT-----------------------------------------------------------------------------------------------------------------------
droPer2	scaffold_1363:4042-4252 +		TAATTGTTTCG-----------------------C-------------------------------------------------------------------------------C---------TTTTTTATA----------------CCCGATACTCAA----AATGAGTATTG--GGGTATATTAGATTTGTGG-TAAAAGTGTATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCTGTCCGTCT--------------G----TCCGTCCGTCCG--------TCTGT-CCGTCT---G-------------------------------------------------------------
droAna3	scaffold_13337:22826319-22826517 +		CGACGTTTTATTTT--GGTTCGGAAACCTATCATTTTTTTTATATAAATAGCTC-------------------------------------------TTTT------------TC---------TTTATTATA----------------CCCGGTACTCGA----A--GATTGCAA--AATT-------AATCGTGT-AA-------ATATGTGTAACAGGGAGAAAAAGTCATCTCCGACCCCATAAAGTATATATATTCTTGATCAGCGTCAACATACGAGTCGATTTAGTTATATCCATCT------------------------------------------------------------------------------------------------------------------------------------
droBip1	scf7180000391471:7397-7620 -		TAAATTCGTTG-----------------------TT------------------GTTTTTACTTCAATTTAATTCAAT--------------------------------CTA----------------------TATATTTTTTTATACCC-----TTGC----A--G------A--GGGTATTATAATTTTGTCC-AA-------AAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCCGTCT--------------G----TCCGTCTGTCTG--------TTTCTA-----CGCA-AA--------------------------C--------------------------------
droKik1	scf7180000302352:12945-13158 -		TGCGTTTTTAT-----------------------TT------------------ATTTAT------------------------------------ATATTTATATTATATTAT----------ATTTTTATA----------------CCC-----TTGC--------------A--GGGTATTATAATTTCAGTC-AG-------AAGTTTGCAACGCAGAGAAGGAGACCTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATAAACAGTCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCCGTCCGTCT--------------G----TCCGTCTGTCCG--------TTTCTA-----CGCA-AA--------------------------C--------------------------------
droEle1	scf7180000491186:341656-341859 +		TAAATTTTAAG-----------------------TTATTTTTGAAAAATGTATA-------------------------------------------TGTT------------TA---------TTTTTTATA----------------CCC-----TTGC----A--G------A--GGGTATTATAATTTCAGTC-AG-------AAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGTAGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCT--------------G----TCCGTCCGTCTG--------T----------------------------------------------------------------------------
droRho1	scf7180000772516:2593-2847 +		TAATTTATAAA-----------------------TT------------------TATCT-----------CGTTC-----------------------------------CTATA---------TTTATTATA----------------CCCGTTACTCGT----A--GAGTAAAA--GGGTATATTGTATTCGTGC-AA-------AAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTCGATCTAGCCATGTTCGTCTGTCCGTCTGTCTGTCC--------------GTCTGTCTGTCCATCTGTCTG----TCTGT-CCGTAT---GAACGCTGAGATCTCGGAACCTATAAAAGCT-------------------------------
droBia1	scf7180000301733:12499-12741 -		CAACTTGA----------------A------------------------------------------GTGTATTAAATTTACTTTGGATTTTAAATGGTCTTTCAA--------GGTTAT-TGTCT---------TATAGTTTATTATACCC-----TTGC----A--G------A--GGGTATAATGATTTCAGTC-AG-------AAGTTTGCAACGCAGTGAAGGAGACATTTCCGACCGCATAAAGTATATATATTCTTGATCAGCATCACATGACGAGTAGATATAGCCATGTCCGTCTGTCCGTCTGTCTGTCT--------------G----TCTGTCCGTCCG--------TTTCTA-----CGCA-AA--------------------------C--------------------------------
droTak1	scf7180000414180:16263-16488 +		TAAATTTTGTA-----------------------T-----------------------------------CGTTTTA-----------------------------TAT-TTGAA---------ATAGTTATA----------------CCCGTTACTCGT----A--GAGTAAAA--GGGTATACTAGATTCGTGC-AA-------AAGTATGTAACAGCTAAAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCT--------------G----TCCGTCTGTCTGTCTGTCCGTCT-----GTAT---GAACG------------------------C--------T-----------------------
droEug1	scf7180000409323:20257-20477 +		TAACTTTGTTAG----------G-----------AT------------------GATTTTCC-------------------------------------------------TGAA-CTACCT--GTTTTTATA----------------CCCGTTACTCGT----A--GAGTAAAA--GGGTTTACTAGATTCGTTG-AG-------AAGTATGTAACAGGTAGAAGGAAGTATTTCCGACCCTATAAAGTATATATATTCTTGATCAGGATGAATAGCGAAGACGAATGAGCCATGTCCGTCTGTCTGTCCGTCTGTCC----------------------ATATGTCCG--------TCTGT-CCGTAT---GAA--------------------------C--------------------------------
dm3	chrX:200819-200995 -		TAACCTTTATA-----------------------C-----------------------------------AGTTCAAA--------------------------------TTATA---------CTTCTTATA----------------CCCGTTACTTGC----A--GACTAAAA--GAGTATACTAGATTCGTTGAAA-------ATGTATGTAACAAGTAGAAAGAAGCGTTTCCGACCATATAAAGTTTATATATTCTTGATCAGTATCAATAGCCCAGTCGATCTGGCACTGTCCGTCTGTC---------------------------------------------------------------------------------------------------------------------------------
droSim2	2l:21019261-21019430 -		C-----------------------------------------------------------------------------------------------------------------------------------------------------TCGTTACTTGT----A--CAGTATTA--AGCTATACTAGATTCGTTG-AA-------AACTGAGTAATAAGCAGAAGGAAGCGTTTCTGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCTGAGTCGATCTGACCATGTCTGTCAGTCCTTGCTTTTTTT----GGATTAAAT-------------CAGTTG--------T----------------------------------------------------------------------------
droSec2	scaffold_367:6549-6724 +		-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATTCGTTG-AA-------AACTGAGTAATAAGCAGAAGAAATCGTTTCTGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCTGAGTCGATCTGACCATGTCCGTCTGTCAGTCCTTGCTTTTTTTGGATTAAATCAG----TTGTTTTGCCCATTTATATATATATGCCGAAA---ACA--------------------------T--------------------------------
droYak3	v2_chrUn_001:472894-473108 -		CAAATTTTTT-------------------------T------------------GATTTTAT------------------------------------------------TT-GT---------CTTATTATA----------------CCCGTTACTCGT----A--GAGTAAAA--GGGTATACTAGATTCGTTG-AA-------AAGTATGTAACAGGCAGAAGGAAGGGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGACCAATAGCCGAGTCGATATGACCATGTCCGTCTGTTCGTCTGTCCGTCT--------------G----TCCGTCTGTCTG--------TCCGT-CCGTAT---GAA--------------------------C--------------------------------
droEre2	scaffold_4929:22698218-22698435 +		CAACTTTCTAACTTACAGTCTTGAGA--------------------------------------------TATCGAATTTCATACGGATTTCATATGAGTTTCCAATGTC---TG---------ATAATTATA----------------TCCGTTACTCCT--------------A--AGGTATACTAGATTCGTTG-AA-------AAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAGGTATATATATTCTTGATCAGGATCAATAGCCGATTTGATCTGGCCAAGTCCGTCTGTCCATCAGT--------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droWil2

TAACTTTTTAG-----------------------TT------------------GATTTT-----------GAAT-----------------------------------TTGAT---------CTCATTATATATGTATTTTGC---------------T----A--TACCATGC--TAATGTCTTAGGATCGCGA-AA-------ATCAATGTAACATGCAGGAGAAAGTCTTCCTGATCCCATAGGGTTTATGTATTCTTGATCAGCATCACAAGATCATTAGTTTTAATTATTTCCTTTTTTCTTTTGGTTTTTAT--------------T----TACATAGATCTG--------TT-GT-CCACGT---GAA--------------------------CAGA-ACGCTTTACCCATATTAGCTCCACGTAT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.................................................................................................................................................................................................................................................................................................................................................................................GT---GAA--------------------------CAGA-ACGCTTTACC..................	19	1	1.00	1	1	0	0	0	0

droVir3

AACTTTTTGGA------------------------------------------------------------------------------------------------------------------TGATTATA----------------CCCTGAACCCATTAAAAATGGGTATAC--GGGTATATTGTATTTGTGC-AAAATCCAAATGTATGTAACAGGCAGAAGGAGGCATCTCCGACCCCATAAAGTATATATATTATTGATCAGCATTAATAGCTGAGTCGATCTAGCCATGTCCATCTGTCCGTCCGTCCGTAT--------------G----TATGAACGCCTG--------TTACAAACATAT---GCA--------------------------CAAATACATTATACCCTTTTTA-----------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.........................................................................................................................................................................................................................................................................................................TCCATCTGTCCGTCCGTCCGTAT--------------G----TA...............................................................................................	26	4	5.75	23	0	0	7	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	4	2	1	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................TGTCCATCTGTCCGTCCGTCCGTAT--------------G----.................................................................................................	26	3	3.00	9	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTATATTG........................................................................................................................................................................................................................................................	26	15	2.53	38	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	4	0	0	0	2	0	0	0	0	17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTCCGTCC........................................................................................................................	27	3	2.00	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTATATTGT.......................................................................................................................................................................................................................................................	27	15	1.87	28	0	0	0	0	0	1	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................TGTCCATCTGTCCGTCCGTCCGTAT--------------G----TA...............................................................................................	28	3	1.67	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTCC............................................................................................................................	23	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTATAT..........................................................................................................................................................................................................................................................	24	16	1.63	26	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0	0	6	0	0	0	0	8	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................TCCATCTGTCCGTCCGTCCGTAT--------------G----.................................................................................................	24	4	1.25	5	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCCATCTGTCCG...............................................................................................................................	26	4	1.00	4	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTATATT.........................................................................................................................................................................................................................................................	25	16	1.00	16	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TCTAGCCATGTCCATCTGTCCGTCCGTCCGT......................................................................................................................	31	3	1.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
.........................................................................................................................................................................................................................................................................................................TCCATCTGTCCGTCCGTCCGTAT--------------G----TAT..............................................................................................	27	4	0.75	3	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................TGTCCATCTGTCCGTCCGTCCGTAT--------------......................................................................................................	25	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTCCG...........................................................................................................................	24	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TCTAGCCATGTCCATCTGTCCGTCC............................................................................................................................	25	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................TGTCCATCTGTCCGTCCGTCCGTAT--------------G----T................................................................................................	27	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TCTAGCCATGTCCATCTGTCCGTCCGT..........................................................................................................................	27	3	0.67	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................CATGTCCATCTGTCCGTCCGTC.........................................................................................................................	22	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
....................................................................................................................................................................................................................................................................................................CCATGTCCATCTGTCCGTCCGTCCGTA.....................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CCATGTCCATCTGTCCGTCCGT..........................................................................................................................	22	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.....................................................................................................................................................................................................................................................................................................CATGTCCATCTGTCCGTCCGTCCGTA.....................................................................................................................	26	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTCCGTCCGTA.....................................................................................................................	30	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GTCCATCTGTCCGTCCGTCCGTAT--------------G----TA...............................................................................................	27	4	0.50	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................CATGTCCATCTGTCCGTCCGTCCGTAT--------------G----.................................................................................................	28	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................CCATCTGTCCGTCCGTCCGTAT--------------G----TA...............................................................................................	25	5	0.40	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTCCGTC.........................................................................................................................	26	3	0.33	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TCTAGCCATGTCCATCTGTCCGTCCG...........................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTCCGTCCG.......................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTCCGT..........................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TCTAGCCATGTCCATCTGTCC................................................................................................................................	21	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTC.............................................................................................................................	22	11	0.27	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................TCCATCTGTCCGTCCGTCCGTAT--------------G----T................................................................................................	25	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................AGCCATGTCCATCTGTCCGTCC............................................................................................................................	22	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CGATCTAGCCATGTCCATCTGTCCGT..............................................................................................................................	26	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CCATGTCCATCTGTCCGTCCGTC.........................................................................................................................	23	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GTCCATCTGTCCGTCCGTCCGTAT--------------G----.................................................................................................	25	4	0.25	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................TCCATCTGTCCGTCCGTCCGTAT--------------G----TATGA............................................................................................	29	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................GATCTAGCCATGTCCATCTGTCCGT..............................................................................................................................	25	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................GCCATGTCCATCTGTCCGTCCGTCCG.......................................................................................................................	26	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTATA...........................................................................................................................................................................................................................................................	23	18	0.22	4	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................CCATCTGTCCGTCCGTCCGTAT--------------G----TATG.............................................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................AGTCGATCTAGCCATGTCCATCTGTCC................................................................................................................................	27	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCCATCTGTCC................................................................................................................................	25	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCATCTGTCC................................................................................................................................	26	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAGGCATC.........................................................................................................................................................................................................	26	10	0.20	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TCTAGCCATGTCCATCTGTCCGT..............................................................................................................................	23	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................TCTAGCCATGTCCATCTGTCCG...............................................................................................................................	22	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CGATCTAGCCATGTCCATCTGTCC................................................................................................................................	24	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TAAAGTATATATATTATTGATCAGCA.....................................................................................................................................................................	26	18	0.17	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................AAAGTATATATATTATTGATCAGC......................................................................................................................................................................	24	19	0.16	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAGGC............................................................................................................................................................................................................	23	14	0.14	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTATATTGTA......................................................................................................................................................................................................................................................	28	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGAG..............................................................................................................................................................................................................	22	17	0.12	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGTCCGTCCGAT.....................................................................................................................	30	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................TGTCCATCTGTCCGTCCGTCC........................................................................................................................	21	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TGTAACAGGCAGAAGGAGGCA...........................................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GC-AAAATCCAAATGTATGTAACAGG.......................................................................................................................................................................................................................	25	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTAT............................................................................................................................................................................................................................................................	22	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TGTAACAGGCAGAAGGAGGCATC.........................................................................................................................................................................................................	23	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................TCCATCTGTCCGTCCGTCCGT......................................................................................................................	21	11	0.09	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGGAGG.............................................................................................................................................................................................................	24	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAGGCAT..........................................................................................................................................................................................................	25	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TAACAGGCAGAAGGAGGCATC.........................................................................................................................................................................................................	21	12	0.08	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCCGT..............................................................................................................................	21	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AATGTATGTAACAGGCAGAAGGAG..............................................................................................................................................................................................................	24	14	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TAAAAATGGGTATAC--GGGTATATTGT.......................................................................................................................................................................................................................................................	26	15	0.07	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................CAGAAGGAGGCATCTCCGACC..................................................................................................................................................................................................	21	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAGG.............................................................................................................................................................................................................	22	15	0.07	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TAAAAATGGGTATAC--GGGTATAT..........................................................................................................................................................................................................................................................	23	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TAGCCATGTCCATCTGTCC................................................................................................................................	19	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................GTAACAGGCAGAAGGAGGCAT..........................................................................................................................................................................................................	21	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................AGAAGGAGGCATCTCCGACCC.................................................................................................................................................................................................	21	18	0.06	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AAGGAGGCATCTCCGACCC.................................................................................................................................................................................................	19	18	0.06	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................GGAGGCATCTCCGACCCCATA.............................................................................................................................................................................................	21	19	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................CATCTGTCCGTCCGTCC........................................................................................................................	17	19	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..................................................................................................................................................................................................................................GGAGGCATCTCCGACCCC................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
....................................................................................................................................................................................................................TGTAACAGGCAGAAGGAG..............................................................................................................................................................................................................	18	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGTCCGTCCGTCCGTAT--------------G----TATGAAC..........................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TAC--GGGTATATTGTATTTGTGC-AAAAT.........................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTATATTC........................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................CATTAAAAATGGGTATAC--GGG...............................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAG..............................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TAC--GGGTATATTGTATTTGTG................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGT..............................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TGTAACAGGCAGAAGGAGGC............................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGG...............................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCATGTCCATCT....................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTATATTGC.......................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................AGTCGATCTAGCCATGTCCAT......................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................TAACAGGCAGAAGGAGGCATCTCCGT....................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TATAC--GGGTATATTGTATTTGTGC-AAAA..........................................................................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................TTAAAAATGGGTATAC--GGGTA.............................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TAATCTTTTGA-----------------------T----------------------TT------------------------------------------------------TA---------CTTTTTATA----------------CCCTGAACCCATATTCAATGGGAA-ATCAGGGTATAATGGTTTTGTTG-AA-------ATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGGGCGACGAGCTGAGTTGATTTGGCCCTGTCCGTCTGTCTGTCCGTCTGTCC--------------GTCCGTCCGTCTGTCCGTCTGTCCGTATGTA-----T---GAACG------------------------C--------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..............................................................................................................................................................................................................................................................................................ATTTGGCCCTGTCCGTCTGTC.................................................................................................................................	21	20	2.00	40	40	0	0	0	0	0
................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGA...............................................................................................................................................................................................................	21	20	0.60	12	12	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCTGTCCGTATGT........................................................................	21	20	0.55	11	11	0	0	0	0	0
..............................................................................................................................................................................................................................................................................GCGACGAGCTGAGTTGATTTG.................................................................................................................................................	21	20	0.30	6	6	0	0	0	0	0
.................................................................................................................................................................................................................................AGGAGGCGTGGCAGACCCCA...............................................................................................................................................................................................	20	20	0.20	4	4	0	0	0	0	0
............................................................................................................................................................................................................................................................TATATATTCTTGATCAGGGCG...................................................................................................................................................................	21	20	0.15	3	0	0	0	0	0	3
...........................................................................................................................................................................................................................................................................................TTGATTTGGCCCTGTCCGTCTGTCTGT..............................................................................................................................	27	20	0.10	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................TCTTGATCAGGGCGACGAGCTGA..........................................................................................................................................................	23	20	0.10	2	2	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................CCGTCTGTCC--------------GTCCGTCCGTC...........................................................................................	21	20	0.10	2	0	0	0	0	2	0
........................................................................................................................................................................................................................................................................................GAGTTGATTTGGCCCTGTCCGTCT....................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TCC--------------GTCCGTCCGTCTGTCCGTCTG.................................................................................	24	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................TCCGTCTGTCTGTCCGTCTGTC.....................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................GTTGATTTGGCCCTGTCCGTC.....................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTCTGTCCG.............................................................................	20	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................................................TGGGAA-ATCAGGGTATAATGGTTT....................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................TATATATATTCTTGATCAGGG.....................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0
.............................................................................................................................................................................................TTTTGTTG-AA-------ATGTATGTAACAGGC......................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................CTGTCCGTCTGTCCGTATGT........................................................................	20	20	0.05	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................AGGAGGCGTGGCAGACCCCACA.............................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0

droGri2

T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGC-AA-------ATGTATGTAACAGGCAGACGGAGGCATCTCTGACCCCATAGAGTATATATATTCTTGATCAGGATCAACAGCCGGGCTCATATAGCCATGTCCGTCCGTCCGTCTGTCTGTAT--------------T--------------------------GACA-----CGCA-GA--------TCTCAGATACTATAAGAGCTAG-AGACTT----CAAATTAGGTTCTCGTAT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
................................................................................................................................................................................................................................................................................................ATAGCCATGTCCGTCCGTC.................................................................................................................................	19	13	0.08	1	1	0

dp5

AGACTTTTTGT-----------------------T------------------------------------------------------------------------------------------TAATTATA----------------CCCGATACTCAA----AATGAGTATTG--GGGTATATTAGATTTGTGG-TAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCCGTCTGTCCGTCCTTATT-----------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
....................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGCCG...........................................................................................................................................................	21	20	1.80	36	0	36	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................TTGTGG-TAAAAGTGGATGTGTG..............................................................................................................................................................................................................................	22	20	0.70	14	0	0	0	0	0	0	14	0	0	0
..............................................................................................................................................................................................TTTGTGG-TAAAAGTGGATGT.................................................................................................................................................................................................................................	20	20	0.45	9	0	0	9	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATTGAGC...............................................................................................................................................	19	20	0.40	8	0	8	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCC............................................................................................................................................................	19	20	0.20	4	0	0	4	0	0	0	0	0	0	0
...............................................................................................................................................................................................TTGTGG-TAAAAGTGGATGTGA...............................................................................................................................................................................................................................	21	20	0.20	4	0	4	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCCGTCTG...................................................................................................................................	21	12	0.17	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................ATATATTCTTGATCAGCATCA..................................................................................................................................................................	21	20	0.15	3	0	0	0	0	0	3	0	0	0	0
................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCCATAAAG..........................................................................................................................................................................................	26	20	0.10	2	0	0	0	0	0	0	0	2	0	0
.......................................................................................................................................................................TGAGTATTG--GGGTATATTAGATTTGTG................................................................................................................................................................................................................................................	27	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................ATCAATAGCCGAGTCGATT...................................................................................................................................................	19	20	0.10	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TGTAACGTCCAGAAGGAATC............................................................................................................................................................................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CCATGTCCGTCTGTCCGTCC............................................................................................................................	20	10	0.10	1	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................ATCGTTTCCGACCCCATAAAGTATATA....................................................................................................................................................................................	27	20	0.10	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCCGTCTGT..................................................................................................................................	22	12	0.08	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TTGAGCCATGTCCGTCTGTCC................................................................................................................................	21	12	0.08	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................GCCATGTCCGTCTGTCCGTC.............................................................................................................................	20	16	0.06	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCCGTCTT...................................................................................................................................	21	18	0.06	1	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................GATCAGCATCAATAGCCGAGTCG......................................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................TGAGTATTG--GGGTATATTAGAT.....................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................AGAAGGAATCGTTTCCGACCCCATAAAG..........................................................................................................................................................................................	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................CAA----AATGAGTATTG--GGGTATATTAGAT.....................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................................................................AGTATTG--GGGTATATTAGATT....................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	1	0	0	0
..................................T------------------------------------------------------------------------------------------TAATTATA----------------CCCGATACTCA....................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCCGTC.....................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................................ATCAATAGCCGAGTCGATTGAGC...............................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATTGAGCCATGT..........................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTTCCGACCCCATAAAGTATAT.....................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................GAGTATTG--GGGTATATTAG.......................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................TAAAAGTGGATGTGTGTAACGTC.......................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0

droPer2

TAATTGTTTCG-----------------------C-------------------------------------------------------------------------------C---------TTTTTTATA----------------CCCGATACTCAA----AATGAGTATTG--GGGTATATTAGATTTGTGG-TAAAAGTGTATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCTGTCCGTCT--------------G----TCCGTCCGTCCG--------TCTGT-CCGTCT---G-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.................................................................................................................................................................................................................................................................................................................TCCGTCTGTCCGTCT--------------G----TCCGT............................................................................................	21	20	0.75	15	0	15	0	0	0	0
............................................................................................................................................................................................GATTTGTGG-TAAAAGTGTATG..................................................................................................................................................................................................................................	21	20	0.30	6	0	0	0	0	0	6
..................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCGAGT........................................................................................................................................................	26	20	0.25	5	0	5	0	0	0	0
................................................................................................................................................................................................................................................................................................TGAGCCATGTCTGTCTGTCCGTCTGTC.........................................................................................................................	27	20	0.25	5	5	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................CCGTCTGTCCGTCT--------------G----TCCGT............................................................................................	20	20	0.25	5	0	5	0	0	0	0
..............................................................................................................................................................................................TTTGTGG-TAAAAGTGTATG..................................................................................................................................................................................................................................	19	20	0.20	4	0	0	0	0	0	4
............................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCTGTCTGTCC................................................................................................................................	24	20	0.15	3	0	3	0	0	0	0
..........................................................................................................................................................................................................................................................................................GTCGATTGAGCCATGTCTGTC.....................................................................................................................................	21	20	0.15	3	0	0	0	0	0	3
..............................................................................................................................................................................................TTTGTGG-TAAAAGTGTATGT.................................................................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	0	2
...................................................................................................................................TA----------------CCCGATACTCAA----AATGAGTATTG--..................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................TCTGTCCGTCTGTCCGTCT--------------......................................................................................................	19	20	0.05	1	0	1	0	0	0	0
.................................................................................................................................................................................................GTGG-TAAAAGTGTATGTGTGTAA...........................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................GTCTGTCCGTCT--------------G----TCCGT............................................................................................	18	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................................................TTG--GGGTATATTAGATTTGT.................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0
.....................................................................................................................................................................................TATATTAGATTTGTGG-TAAAAG........................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................CGAGTCGATTGAGCCATGTCT........................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCCGTCTG...........................................................................................................................	18	20	0.05	1	0	0	0	0	0	1
............................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCTGTC.....................................................................................................................................	19	20	0.05	1	0	0	0	1	0	0
........................................................................................................................................................................................................AAAGTGTATGTGTGTAACGT........................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	1
............................................................................................................................................................................................................................................................................................................GTCTGTCCGTCTGTCCGTCT--------------G----.................................................................................................	21	20	0.05	1	0	0	0	0	0	1
............................................................................................................................................................................................................................................................................................................................GTCT--------------G----TCCGTCCGTCCG--------TCTGT-CCGTC..................................................................	27	20	0.05	1	1	0	0	0	0	0

droAna3

CGACGTTTTATTTT--GGTTCGGAAACCTATCATTTTTTTTATATAAATAGCTC-------------------------------------------TTTT------------TC---------TTTATTATA----------------CCCGGTACTCGA----A--GATTGCAA--AATT-------AATCGTGT-AA-------ATATGTGTAACAGGGAGAAAAAGTCATCTCCGACCCCATAAAGTATATATATTCTTGATCAGCGTCAACATACGAGTCGATTTAGTTATATCCATCT------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...........................................................................................................................................................................................................................................................ATATATATTCTTGATCAGC......................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0

droBip1

TAAATTCGTTG-----------------------TT------------------GTTTTTACTTCAATTTAATTCAAT--------------------------------CTA----------------------TATATTTTTTTATACCC-----TTGC----A--G------A--GGGTATTATAATTTTGTCC-AA-------AAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCCGTCT--------------G----TCCGTCTGTCTG--------TTTCTA-----CGCA-AA--------------------------C--------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TGCGTTTTTAT-----------------------TT------------------ATTTAT------------------------------------ATATTTATATTATATTAT----------ATTTTTATA----------------CCC-----TTGC--------------A--GGGTATTATAATTTCAGTC-AG-------AAGTTTGCAACGCAGAGAAGGAGACCTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATAAACAGTCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCCGTCCGTCT--------------G----TCCGTCTGTCCG--------TTTCTA-----CGCA-AA--------------------------C--------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TAAATTTTAAG-----------------------TTATTTTTGAAAAATGTATA-------------------------------------------TGTT------------TA---------TTTTTTATA----------------CCC-----TTGC----A--G------A--GGGTATTATAATTTCAGTC-AG-------AAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGTAGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCT--------------G----TCCGTCCGTCTG--------T----------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TAATTTATAAA-----------------------TT------------------TATCT-----------CGTTC-----------------------------------CTATA---------TTTATTATA----------------CCCGTTACTCGT----A--GAGTAAAA--GGGTATATTGTATTCGTGC-AA-------AAGTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGAGTCGATCTAGCCATGTTCGTCTGTCCGTCTGTCTGTCC--------------GTCTGTCTGTCCATCTGTCTG----TCTGT-CCGTAT---GAACGCTGAGATCTCGGAACCTATAAAAGCT-------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CAACTTGA----------------A------------------------------------------GTGTATTAAATTTACTTTGGATTTTAAATGGTCTTTCAA--------GGTTAT-TGTCT---------TATAGTTTATTATACCC-----TTGC----A--G------A--GGGTATAATGATTTCAGTC-AG-------AAGTTTGCAACGCAGTGAAGGAGACATTTCCGACCGCATAAAGTATATATATTCTTGATCAGCATCACATGACGAGTAGATATAGCCATGTCCGTCTGTCCGTCTGTCTGTCT--------------G----TCTGTCCGTCCG--------TTTCTA-----CGCA-AA--------------------------C--------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TAAATTTTGTA-----------------------T-----------------------------------CGTTTTA-----------------------------TAT-TTGAA---------ATAGTTATA----------------CCCGTTACTCGT----A--GAGTAAAA--GGGTATACTAGATTCGTGC-AA-------AAGTATGTAACAGCTAAAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCT--------------G----TCCGTCTGTCTGTCTGTCCGTCT-----GTAT---GAACG------------------------C--------T-----------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TAACTTTGTTAG----------G-----------AT------------------GATTTTCC-------------------------------------------------TGAA-CTACCT--GTTTTTATA----------------CCCGTTACTCGT----A--GAGTAAAA--GGGTTTACTAGATTCGTTG-AG-------AAGTATGTAACAGGTAGAAGGAAGTATTTCCGACCCTATAAAGTATATATATTCTTGATCAGGATGAATAGCGAAGACGAATGAGCCATGTCCGTCTGTCTGTCCGTCTGTCC----------------------ATATGTCCG--------TCTGT-CCGTAT---GAA--------------------------C--------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

TAACCTTTATA-----------------------C-----------------------------------AGTTCAAA--------------------------------TTATA---------CTTCTTATA----------------CCCGTTACTTGC----A--GACTAAAA--GAGTATACTAGATTCGTTGAAA-------ATGTATGTAACAAGTAGAAAGAAGCGTTTCCGACCATATAAAGTTTATATATTCTTGATCAGTATCAATAGCCCAGTCGATCTGGCACTGTCCGTCTGTC---------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..............................................................................................................................................................TGC----A--GACTAAAA--GAGTATACTAGA......................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TAGAAAGAAGCGTTTCCGACCATA...............................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................CAAGTAGAAAGAAGCGTTTCC......................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TAGAAAGAAGCGTTTCCGACC..................................................................................................................................................................................................	21	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................ATCAGTATCAATAGCCCAGTCGATCT..................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TAAAA--GAGTATACTAGATTCGTTGAA.............................................................................................................................................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................TCCGACCATATAAAGTTTATATATT................................................................................................................................................................................	25	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................GAAGCGTTTCCGACCATATAAAGTTT.......................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................GAAGCGTTTCCGACCATATAAAGTT........................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................TCAATAGCCCAGTCGATCTGG................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TTCCGACCATATAAAGTTTATATATTC...............................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TTCCGACCATATAAAGTTTATATA..................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................AGCGTTTCCGACCATATAAAGTTTA......................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TAGAAAGAAGCGTTTCCGAC...................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................AAA--GAGTATACTAGATTCGTT................................................................................................................................................................................................................................................	21	8	0.38	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TTCTTGATCAGTATCAATAGC.............................................................................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................TAAAA--GAGTATACTAGATTCG..................................................................................................................................................................................................................................................	21	6	0.33	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TTCCGACCATATAAAGTTTA......................................................................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................AAA--GAGTATACTAGATTCGTTGAAA-------A....................................................................................................................................................................................................................................	26	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TAGAAAGAAGCGTTTCCG.....................................................................................................................................................................................................	18	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TAAAA--GAGTATACTAGATTCGTTG...............................................................................................................................................................................................................................................	24	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TTGATCAGTATCAATAGC.............................................................................................................................................................	18	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................AAGAAGCGTTTCCGACCATAT..............................................................................................................................................................................................	21	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................AAAGAAGCGTTTCCGACCATA...............................................................................................................................................................................................	21	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................ATATATTCTTGATCAGTATC...................................................................................................................................................................	20	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TATATTCTTGATCAGTATC...................................................................................................................................................................	19	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................AAGCGTTTCCGACCATATAAAGT.........................................................................................................................................................................................	23	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................ATAAAGTTTATATATTCTTGA...........................................................................................................................................................................	21	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................TATACTAGATTCGTTGAAA-------.....................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

C-----------------------------------------------------------------------------------------------------------------------------------------------------TCGTTACTTGT----A--CAGTATTA--AGCTATACTAGATTCGTTG-AA-------AACTGAGTAATAAGCAGAAGGAAGCGTTTCTGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCTGAGTCGATCTGACCATGTCTGTCAGTCCTTGCTTTTTTT----GGATTAAAT-------------CAGTTG--------T----------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
......................................................................................................................................................................................ATACTAGATTCGTTG-AA-------AACTGAGT.............................................................................................................................................................................................................................	25	2	1.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGATC...................................................................................................................................................................	24	20	0.85	17	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................TAGCTGAGTCGATCTGACC..............................................................................................................................................	19	4	0.75	3	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................TGATCAGGATCAATAGCT............................................................................................................................................................	18	8	0.63	5	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................TGAGTCGATCTGACCATGTCTGTCAG...................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCTGAGTC.......................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................TTGCTTTTTTT----GGATTAAAT-------------C..........................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................TGAGTCGATCTGACC..............................................................................................................................................	15	5	0.40	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................CAGGATCAATAGCTGAGTCGATC...................................................................................................................................................	23	8	0.38	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................TATATATTCTTGATCAGGATCAATAGCT............................................................................................................................................................	28	3	0.33	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................AGCTGAGTCGATCTGACC..............................................................................................................................................	18	4	0.25	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................AGCAGAAGGAAGCGTT.........................................................................................................................................................................................................	16	10	0.20	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................CAGGATCAATAGCTGAGTCGATCT..................................................................................................................................................	24	7	0.14	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................TCTGACCATATAAAGTATATATATT................................................................................................................................................................................	25	7	0.14	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................CAATAGCTGAGTCGATC...................................................................................................................................................	17	14	0.14	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................................................................................................................................................................GAAGCGTTTCTGACCATATAAAGTA........................................................................................................................................................................................	25	8	0.13	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................CAGGATCAATAGCTGAGTCGAT....................................................................................................................................................	22	8	0.13	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................TCTGACCATATAAAGTATATATAT.................................................................................................................................................................................	24	8	0.13	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................TTTCTGACCATATAAAGTATATAT...................................................................................................................................................................................	24	9	0.11	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................AGGATCAATAGCTGAGTCGATCT..................................................................................................................................................	23	9	0.11	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TAAAGTATATATATTCTTGATCAGG......................................................................................................................................................................	25	20	0.10	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGA.....................................................................................................................................................................	22	20	0.10	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................AGGATCAATAGCTGAGTCGAT....................................................................................................................................................	21	10	0.10	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GAGTCGATCTGACCATGTC.........................................................................................................................................	19	12	0.08	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................GAGTCGATCTGACCATGT..........................................................................................................................................	18	12	0.08	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................AAGCAGAAGGAAGCGT..........................................................................................................................................................................................................	16	13	0.08	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................AGCAGAAGGAAGCGT..........................................................................................................................................................................................................	15	14	0.07	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................AGTATATATATTCTTGATCAGGATC...................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................ATATATATTCTTGATCAGGATCAAT................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................ATATATATTCTTGATCAGGATCAA.................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATTCGTTG-AA-------AACTGAGTAATAAGCAGAAGAAATCGTTTCTGACCATATAAAGTATATATATTCTTGATCAGGATCAATAGCTGAGTCGATCTGACCATGTCCGTCTGTCAGTCCTTGCTTTTTTTGGATTAAATCAG----TTGTTTTGCCCATTTATATATATATGCCGAAA---ACA--------------------------T--------------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
..........................................................................................................................................................................................................................................................TATATATATTCTTGATCAGGATC...................................................................................................................................................................	23	20	0.15	3	3	0	0	0
.........................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGGATCAATA...............................................................................................................................................................	28	20	0.05	1	1	0	0	0
..........................................................................................................................................................................................................................................................TATATATATTCTTGATCAGGATCAA.................................................................................................................................................................	25	20	0.05	1	1	0	0	0
............................................................................................................................................................................................................................................................TATATATTCTTGATCAGGATC...................................................................................................................................................................	21	20	0.05	1	1	0	0	0
......................................................................................................................................................................................................................................................AAAGTATATATATTCTTGATCA........................................................................................................................................................................	22	20	0.05	1	1	0	0	0

droYak3

CAAATTTTTT-------------------------T------------------GATTTTAT------------------------------------------------TT-GT---------CTTATTATA----------------CCCGTTACTCGT----A--GAGTAAAA--GGGTATACTAGATTCGTTG-AA-------AAGTATGTAACAGGCAGAAGGAAGGGTTTCCGACCATATAAAGTATATATATTCTTGATCAGGACCAATAGCCGAGTCGATATGACCATGTCCGTCTGTTCGTCTGTCCGTCT--------------G----TCCGTCTGTCTG--------TCCGT-CCGTAT---GAA--------------------------C--------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....................................................................................................................................................................................................................................................................TTGATCAGGACCAATAGCCGAGTCGA.....................................................................................................................................................	26	20	7.30	146	0	0	0	0	0	0	0	0	0	0	146
.................................................................................................................................................................................................................................................................................................................TTCGTCTGTCCGTCT--------------G----TCCGTCTGTC.......................................................................................	26	3	1.00	3	0	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TAACAGGCAGAAGGAAGGGTTTCC......................................................................................................................................................................................................	24	20	0.90	18	0	0	18	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGTTCGTCTGTCCGTCT--------------G----TCCGTC...........................................................................................	24	3	0.67	2	0	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGTTCGTCTGTCCGTCT--------------G----TCCGTCT..........................................................................................	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................TATATATTCTTGATCAGGACCAATAGCC............................................................................................................................................................	28	20	0.50	10	0	0	10	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TGACCATGTCCGTCTGTTCGTCTGTC.........................................................................................................................	26	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGTTCGTCTGTCCGTCT--------------G----TCC..............................................................................................	21	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................TGTTCGTCTGTCCGTCT--------------G----TCCGC............................................................................................	23	7	0.14	1	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................TTCTTGATCAGGACCAATAGCCGAG.........................................................................................................................................................	25	20	0.10	2	0	0	0	0	0	0	2	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................TCTGTCCGTCT--------------G----TCCGTCTGTCTG--------TCCG.........................................................................	28	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................TAAAGTATATATATTCTTGATCAGGACC...................................................................................................................................................................	28	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................TG-AA-------AAGTATGTAACAGGCAGAAGG................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................GGCAGAAGGAAGGGTTTCCGACCATATA.............................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................TAGCCGAGTCGATATGACCATGTCCG.......................................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................AGTCGATATGACCATGTCCGTCT....................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

CAACTTTCTAACTTACAGTCTTGAGA--------------------------------------------TATCGAATTTCATACGGATTTCATATGAGTTTCCAATGTC---TG---------ATAATTATA----------------TCCGTTACTCCT--------------A--AGGTATACTAGATTCGTTG-AA-------AAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAGGTATATATATTCTTGATCAGGATCAATAGCCGATTTGATCTGGCCAAGTCCGTCTGTCCATCAGT--------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.....................................................................................................................................................................................................................................................TAAGGTATATATATTCTTGATCAGGAT....................................................................................................................................................................	27	12	0.17	2	0	0	0	0	0	0	2
................................................................................................................................................................................................CGTTG-AA-------AAGTATGTAACAGG.......................................................................................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0	0
.....................................................................................................................................................................................TATACTAGATTCGTTG-AA-------AAG..................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0

dwi_2681

scf2_1100000004909:3155946-3156096 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads