ID:

dwi_264

 Coordinate:

scf2_1100000002383:11251-11401 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.8 -13.8 -13.7

Flybase annnotation

exon [dwil_GLEANR_8275:2]; CDS [Dwil\GK24135-cds]; intron [Dwil\GK24135-in]

Repeatable elements

NameClassFamilyStrand
Copia-4_DWil-I-intLTRCopia-
mature
  1. scf2_1100000003187:1566-1586 -
  2. scf2_1100000002039:2118-2138 +
  3. dwi_264  scf2_1100000002383:11327-11347 -
  4. scf2_1100000004458:3240-3260 -
  5. scf2_1100000004625:31941-31961 -
  6. scf2_1100000004860:27601-27621 +
  7. scf2_1100000004947:902202-902222 -
  8. scf2_1100000004947:906394-906414 -
  9. scf2_1100000004952:86177-86197 +
  10. scf2_1100000004954:464005-464025 -
  11. scf2_1100000004957:226663-226683 -
  12. scf2_1100000004965:403437-403457 +
  13. scf2_1100000000727:4430-4450 +
star
  1. scf2_1100000003187:1490-1509 -
  2. dwi_264  scf2_1100000002383:11251-11270 -
  3. scf2_1100000004458:3164-3183 -
  4. scf2_1100000004591:117143-117162 -
  5. scf2_1100000004620:342083-342102 +
  6. scf2_1100000004625:31865-31884 -
  7. scf2_1100000004774:99-118 -
  8. scf2_1100000004832:299009-299028 -
  9. scf2_1100000004888:982734-982753 +
  10. scf2_1100000004952:86254-86273 +
  11. scf2_1100000004957:226587-226606 -
  12. scf2_1100000004958:1128890-1128909 -
  13. scf2_1100000004965:403514-403533 +
  14. scf2_1100000004975:26486-26505 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AATGTCTTGCTAAAGATGCCAAATTTCATTCACGTAGCAAGCATATTGAAGTAAAATATCATTTTGTAAGGGAGATGTATAAAGAAAATGTAATAGATATCAAATACATTCCCACAGATAGTATGACCTCAGATATATTAACAAAGAACTTATGTAAGGTCAAACATATAAAGTTTACAGAAATGTTGGGATTAAAATAATTTTTGTATAAGATAGACTTCGCGTTGAGAAGGAGTGTTAAGATATGTATA
********************************************************************************************************.....(((((((....(((((((((...(((((.............))))).)))))).............))).....)).)))))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
.....................................................................................................................................................................................AATGTTGGGATTAAAATAATTTTTGT............................................ 26 0 8 0.13 1 0 1 0
......................................................................................................................................................................................................AATTTTTGTATAAGATAGACTTCGCGT.......................... 27 0 11 0.09 1 0 0 1
........................................................................................................TACATTCCCACAGATAGTATG.............................................................................................................................. 21 0 13 0.08 1 0 0 1
.....................................................................................................................................................................................AATGTTGGGATTAAAATAAT.................................................. 20 0 14 0.07 1 0 1 0
...................................................................................................................................................................................................................GATAGACTTCGCGTTGAGAAGGAGT............... 25 0 14 0.07 1 0 1 0
.............................................................................................................................ACCTCAGATATATTAACAAAGAACT..................................................................................................... 25 0 14 0.07 1 1 0 0
.....................................................................................................................................TATATTAACAAAGAACTTATGTAAG............................................................................................. 25 0 15 0.07 1 1 0 0
.............................................................................................TAGATATCAAATACATTCCCACAGA..................................................................................................................................... 25 0 15 0.07 1 1 0 0
........................................................................................................................................................................TAAAGTTTACAGAAATGTTGGGATTT......................................................... 26 1 15 0.07 1 0 0 1
..........................CATTCACGTAGCAAGCATATTG........................................................................................................................................................................................................... 22 0 16 0.06 1 1 0 0
..........................CATTCACGTAGCAAGCATATTGA.......................................................................................................................................................................................................... 23 0 16 0.06 1 1 0 0
............................................................................................ATAGATATCAAATACATTCCCACA....................................................................................................................................... 24 0 17 0.06 1 1 0 0
.................................................................................................................ACAGATAGTATGACCTCAGATAT................................................................................................................... 23 0 20 0.05 1 1 0 0
.................................................................................................................ACAGATAGTATGACCTCAGATA.................................................................................................................... 22 0 20 0.05 1 1 0 0

Anti-sense strand reads

TTACAGAACGATTTCTACGGTTTAAAGTAAGTGCATCGTTCGTATAACTTCATTTTATAGTAAAACATTCCCTCTACATATTTCTTTTACATTATCTATAGTTTATGTAAGGGTGTCTATCATACTGGAGTCTATATAATTGTTTCTTGAATACATTCCAGTTTGTATATTTCAAATGTCTTTACAACCCTAATTTTATTAAAAACATATTCTATCTGAAGCGCAACTCTTCCTCACAATTCTATACATAT
**************************************************.....(((((((....(((((((((...(((((.............))))).)))))).............))).....)).)))))..........******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
.....................TTAAAGTAAGTGCATCGTTCGTAT.............................................................................................................................................................................................................. 24 0 17 0.82 14 1 13 0 0
..............................................................................................................................GGAGTCTATATAATTGTTTCTTGAAT................................................................................................... 26 0 14 0.64 9 4 5 0 0
.............................................................................................................AGGGTGTCTATCATACTGGAGTCTAT.................................................................................................................... 26 0 16 0.56 9 3 6 0 0
.......................................................................................................................................................................................................TAAAAACATATTCTATCTGAAGCGCAACT....................... 29 0 11 0.36 4 4 0 0 0
.............................................................................................................................TGGAGTCTATATAATTGTTTCTTGAAT................................................................................................... 27 0 14 0.36 5 1 4 0 0
..............................................................................................................GGGTGTCTATCATACTGGAGTCTAT.................................................................................................................... 25 0 16 0.31 5 5 0 0 0
..........................................................................................................................................................................TTCAAATGTCTTTACAACCCTAAT......................................................... 24 0 13 0.31 4 4 0 0 0
...........................................................................................................................................................................TCAAATGTCTTTACAACCCTAATTTTAT.................................................... 28 0 12 0.25 3 3 0 0 0
.......................................................................................................................................................................................................................CTGAAGCGCAACTCTTCCTCACAAT........... 25 0 13 0.23 3 2 1 0 0
............TTCTACGGTTGGAAGTCAG............................................................................................................................................................................................................................ 19 3 20 0.20 4 0 0 4 0
............................................................................................................AAGGGTGTCTATCATACTGGAGTCTAT.................................................................................................................... 27 0 14 0.14 2 2 0 0 0
.....................TTAAAGTAAGTGCATCGTTCGTATAACT.......................................................................................................................................................................................................... 28 0 16 0.13 2 1 1 0 0
..................................................................................................................GTCTATCATACTAGAGTCTATATAAT............................................................................................................... 26 1 11 0.09 1 1 0 0 0
.................................................................................................ATAGTTTATGTAAGGGTGTCTATCAT................................................................................................................................ 26 0 11 0.09 1 0 1 0 0
...............................................................................................CTATAGTTTATGTAAGGGTGTCTATCAT................................................................................................................................ 28 0 11 0.09 1 1 0 0 0
................................................................................................TATAGTTTATGTAAGGGTGTCTATCAT................................................................................................................................ 27 0 11 0.09 1 0 1 0 0
....................................................................................................................CTATCATACTGGAGTGTATATAATTGT............................................................................................................ 27 1 12 0.08 1 1 0 0 0
............................................................................................................................................................................................................ACATATTCTATCTGAAGCGCAACTCT..................... 26 0 12 0.08 1 0 1 0 0
...........................................................................................................TAAGGGTGTCTATCATACTGGAGTCTA..................................................................................................................... 27 0 12 0.08 1 0 0 1 0
...........................................................................................................................................................................TCAAATGTCTTTACAACCCTAATTTTA..................................................... 27 0 12 0.08 1 1 0 0 0
.........................................................................................................................................................................................................AAAACATATTCTATCTGAAGCGCAACTCT..................... 29 0 12 0.08 1 1 0 0 0
..........................................................................................................................................................................TTCAAATGTCTTTACAACCCTAATTT....................................................... 26 0 13 0.08 1 1 0 0 0
..........................................................................................................................................................................TTCAAATGTCTTTACAACCCTAATT........................................................ 25 0 13 0.08 1 1 0 0 0
.....................................................................................................................................................................................................................ATCTGAAGCGCAACTCTTCCTCACAAT........... 27 0 13 0.08 1 0 1 0 0
.........................................................................................................................................................................TTTCAAATGTCTTTACAACCCTAATTT....................................................... 27 0 13 0.08 1 1 0 0 0
...............................................................................................CTATAGTTTATGTAAGGGTGTCTAT................................................................................................................................... 25 0 14 0.07 1 1 0 0 0
..............................................................................................................................GGAGTCTATATAATTGTTTCTTGAA.................................................................................................... 25 0 14 0.07 1 1 0 0 0
.................................................................................................................................GTCTATATAATTGTTTCTTGAATACAT............................................................................................... 27 0 14 0.07 1 1 0 0 0
..............................................................................................................................GGAGTCTATATAATTGTTTCTTGCAT................................................................................................... 26 1 14 0.07 1 0 1 0 0
................................................................................................................................AGTCTATATAATTGTTTCTTGAATACAT............................................................................................... 28 0 14 0.07 1 1 0 0 0
.............................................................................................................AGGGTTTCTATCATACTGGAGTCTAT.................................................................................................................... 26 1 16 0.06 1 0 1 0 0
....................TTTAAAGTAAGTGCATCGTTCGTAT.............................................................................................................................................................................................................. 25 0 16 0.06 1 0 0 0 1
.....................TTAAAGTAAGTGCATCGTTCGTATAACTT......................................................................................................................................................................................................... 29 0 16 0.06 1 1 0 0 0
..............................................................................................................GGGTGTCTATCATACTGGAGTCTA..................................................................................................................... 24 0 16 0.06 1 1 0 0 0
..........................GTAAGTGCATCGTTCGTATAACTT......................................................................................................................................................................................................... 24 0 16 0.06 1 1 0 0 0
.....................TTAAAGTAAGTGCATCGTTCGTAGA............................................................................................................................................................................................................. 25 1 16 0.06 1 1 0 0 0
...............................................................................................................GGTGTCTATCATACTGGAGTCTAT.................................................................................................................... 24 0 17 0.06 1 1 0 0 0
.....................TTAAAGTAAGTGCATCGTTCGTATC............................................................................................................................................................................................................. 25 1 17 0.06 1 1 0 0 0
...............................................................................................................................................TTCTTGAATACATTCCAGTTTGT..................................................................................... 23 0 20 0.05 1 1 0 0 0
.....................................................................................................................TATCATACTGGAGTCTAT.................................................................................................................... 18 0 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000002383:11201-11451 - dwi_264 AATGTCTTGCTAAAGATGCCAAATTTCATTCACGTAGCAAGCATATTGAAGTAAAATATCATTTTGTAAG---GGAGAT-GTATAAAGAAAATGTAATAGATATCAAATACATTCCCACAGATAGTATGACCTCAGATATATTAACAAAGAACTTATGTAAGGTCAAACATATAAAGTTTACAGAAATGTTGGGATTAAAATAA--TT-------T------------------TT--GT---ATAAG------AT--AG-ACT--TCGCGTTGAGAAGGAGTGTTAAGAT-----A------TGTATA
droVir3 scaffold_10711:506-754 + AGTGCTTAGAAAAAAATCGAATTTTACATAAACGTAGTAAGCACATCGATATAAAGTTTCACCATGTACG---CGAGCT-ATATTCTAAGAACGAAATAGATGTTAAATATATAGGTACTAATGATATGATTGCCGATGTACTAACTAAAAATTTGCAAAAGAACAAGCATGTAAAATGTATTAATGAAATGAATTGTTATTAA--TA-------AG---------------------------------TTT-TTAAGTATGT--AATTGTTGAGAAGGAGTATTGAAAT-----A------TGCATA
droMoj3 scaffold_6173:916-1169 - AATGCCTTGCTAAAGATGCAAAATATCATTCACGTAGCAAGCATATTGAAATAAAATACCATTTTGTAAG---GGAAAT-GTACAAAAATAAAGTTATTGATATAAAGTACATTCCCACAGATGAAATGAAAGCAGATGTATTGACGAAGAATTTATGTAAAGTCAAACATGAGAAATTTACTGAAATGTTAGGTTTAAAATGA--AA-------CAT----T----------TTT--GT---AAA--------AT--AG-ACA--TCGCGTTGAGAAGGAGTGTTAAAAT----TA------TGTATG
droGri2 scaffold_7024:937-1218 - AATGCTTGTCAAAAGATGCTAAGTTCCATGCGCGTAGTAAGCATATCGACATTAAATATCATCATATCAG---AGATATGGTAAAAAAATAATGTAGTTGAAATTGAATATGTACCTAGCAAAAACATGATCTCTGATGTGTTAACGAAAAACTTTTGTAAAGTAAAGCATAAGGAATTTGTTAACTTAATGGGTTTGCACTGA--ATATGTAAAAGTTT-CT----------TTT--GT---TTAAGAAGAA-GTAGAC-AAA--CTGCGTTGAGAAGGAGTGTTTGAAATAATT--GTATTTGTCTA
dp5 Unknown_group_722:7838-8087 + ATCATATTGCGAAAAATCCTATTCACCATAAACGCACAAAGCATATAGATTTAAAATATCATTTTGTTAG---AGACAA-AGTAGAAAGTAAAGAGATAAAACTTGAATATGTCCACACAG--AAAAACGTTGCCGATGTATTAACCAAAAGTTTATGTAAGCAAAAGCATTATAGATTTGTAAAATCGCTTGGATTAAT-TGA--TT-------AATACATT---------------GTAAT--C-------AC--AAA-ATATTATG-CTTAAGCAAAAGTGTTGAAAT---------------TTG
droPer2 scaffold_213:19560-19811 - AAGAGCTGGCTAGGAACCCAGTTCATCACTCAAGGACCAAGCATATTGATATAAGATATCACTTTGTACG---ACAGAT-TGTAGAAGAAGGTCAAGTTAAGTTAAAATATGCTAGTACAACAGATATGATTGCAGATATCTTGACCAAGAGTCTCCGTAAGAGAAAGCATGTCGAATTTACAAAATTGTTAAGTTTAAATTGA--GT-------TAAAT--G----------GA--------------ATTG-GTAAGCATGC--ACGCATTGAGGAAGGGTGTTGAAGA---------------ATG
droAna3 scaffold_13111:684412-684660 + AATGTTTAGCCAAAAATCCAAAGTTCCATGCGAGAAGCAAACACATTGATATTAAGTATCATCATGTCAG---GGATAT-GTATAAAAGTAAAATTATAAATATTGAATATGTATCTACTGAGAATATGATTGCTGATGTATTAACAAAGAATTTGAATAGAGTAAAACATGAGAAATGTATTAGTCTACTAGGACTTTTGTAA-----------------------------------------T--------GAAGAC-ATA--ATGCGTTGAGAAGGAGTGTTGGAAT----TAAAAATTTATACA
droBip1 scf7180000395384:23018-23273 - AATGTTTAGCGAAGAATGCGAGTTTTCATGCTAGAAGTAAACATATAGATATCAAGTATCATTTCATAAG---AGATTT-ATATAAGAAGAAAGTTATTGATATTGAATATGTTCCAACCGAAAATATGATTTCAGATGTTCTAACTAAAGCTCTATGTAAAGTTAAGCACACAAAATGTATTACTTCACTAGGGTTAAACTAA--AA-------AGTAT--C----------TTT--TT---ATT----------AGAT-ATA--CCGCGGTGAGAAGGAGTGTTGAAAA----TA------TTTGTA
droKik1 scf7180000300256:986-1256 - AGTGCCTAGTTAAGAATCCTGTATATCACGCGCGCAGCAAACATATAGACATTAAGTATCATCATGTAAG---AGATAT-GTTTAAAGAAAAAGTCATAGATTTGAGATATGTATCAACAGAGAACATGATGGCAGATGTGTTAACTAAGAATTTGAGCAAAGTTAAGCACTTGAAATGTATAAATATGATGGGTTTTCTGTAA--AT-------TATGTACTTTAGT--TATCCTGTAAA----A-------T---GAC-AAA--CAGCGTTGAGAAGGAGTGTTAGAAA----TATAGA--AGTATA
droFic1 scf7180000453257:17102-17351 - AGTGCCTAGTAAAAAATCCTGTATATCATGCGCGCAGCAAACATATAGATATTAGATACCATCATGTAAG---AGATAT-ATTTAAGGAAAAGATTATAGATTTGAAGTATGTATCAACAGAAAACATGATGGCAGATGTGTTAACGAAGAATTTAAGTAAGCTTAAGCACATGAATTGTATTAATATGATGGGTTTGCTGTAA--AT-------AA----------T--TATCTT--GT---AAA---------------TGA--CAGCGTTGAAAAGGAGTGTTAGAAA----TA--------TAGA
droEle1 scf7180000490104:124016-124246 - ATCAGCTAGCAAAAAATCCGGTGCATCATGCAAAGACGAAGCATGTAGATATAGGATACCACTTTGTACT---TCAGAT-ATTAAGTGAAGGTCAGATTGTTTTGAAATATGAGGCAATG--AGGCATGATTGCAGATGTTTTGACTAAGAATTTGGCAAATAAGAAACACCATTAATTTGTAAAATGGTTGAATCTGTACTAG------------------------------------------------------CA-ATA--TTGCATTGAGGAGGAATGTTAAAAA----TG-----------T
droRho1 scf7180000777237:22958-23222 + AGTATCTTGTAAAGAATTCTGTATATCACGCGCGCAGCAAACATATAGATATTAACTATCATCATGGAAG---AGATAT-GTTTAAAGAAAAGATTATAGATTTAAAATATGTATCAACAGAAAACATGATGGCAGATGTGTTAACAAAGAATCTAAGTAAGATTAAGCACATGAAATGTATTAATATGATGGGGTTGCTGTAA--AT-------AATGTATTTTAAT--TATCCTGTAAA----A-------T---GAC-AAA--CAGCGTTGAGAAGGAGTGTTAGGAA----TA--------TGTA
droBia1 scf7180000302397:87056-87288 + AACAATTGTCAAAGAATCCAGTACATCATTCAAGATCAAAACACATAGATAT-------ATCTTTGTAAG---AGATAT-AGTTAAGGAAGGGCAGATTATTTTGAAGTATTTTTCAACTAAACAGATGATTGCAGATATATTAACAAAGAACCTTCAGAAACAAAAACATTGTGAGCTTACTAAAAAGTTAAGTTTGTATTAA--AA-------TA--------------------TAAA----A-------T---GAG-AGA--TGACATTGAAGAAGAGTATCGAAA-------------------
droTak1 scf7180000412873:44960-45223 + AACATCTCGTCAAGAATGCAACATTCCATGCAAGAAGCAAGCACATCGATATCAAATATCACCACGTTAG---GGAAAT-GTATAAAGAAAATGTTATTGAAATAGAATATGTTCCCACAGAGAAAATGATATCTGATGTACTAACCGAAAATTTGGCTAAAGTTAAGCACGAAAAATGTATTGAACTAATGGGATTATGCTAA--AT-------TAA----TT---TTGAAATT--TGTAAT--G--------CCAGAC-ATA--GTGCTTTGAGAAGGAGTGTTGAATA----TG------TATAAT
droEug1 scf7180000408383:291-534 + AATGTTTAGCTAAGAATCCGATTTTGCATAAACGTAGTAAACATATTGATATTAAGTTTCATCATGTACG---AGAGTT-ATATACTAAAAATGAAATAGATGTTAAGTATATAAGTACTAATGATATGGTCTCAGATGTATTAACTAAAAACTTGCAAAAGAACAAACATGTAAAATGTATTAATGAAATGAATTGTTATTAA--TA-------TG--------------------TATA----A-------A---GTA-TAT--GATTGTTGAGAAGGAGTGTTGAAAT---------------ATG
dm3 chrUextra:10324547-10324784 - AGTGCTTGGTGAAAAATGAAACTTTCCATGCACGTAGTAAGCATATAGATATAAAATATCATTATATAAG---AGAACT-GCATAAGAACAATATAATAGAAGTTAATTATGTACCCACAGAAAACATGATGGCAGATGTTCTAACCAAGAATTTGAATAGATTTAAACATGAAAAGTGTATCCAAGGGATGGGTTTAAACTAAAAAA-------AATGTATTTTGA--------------------------------------------TTTTGGAATTAAGAT----------A------AAAATA
droSim2 node_11571:16491-16733 + AATGCTTAGTTAAGAATCCTAGGTTCCATGCAAGAAGCAAACACATTGACATTAAATATCATTATGTCAG---AGATAT-ATATAAGGATAAAATTGTAAACATTAATTATGTTCCCACTGAAGACGTG------TATGTGTTAACAAAGAATTTAAGTTGAATTAAGCATAATTAATGTATTAAGCTAATGAGACTGTTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTTGAGAAGGAGTGTTGAGTA----TA------TATA-A
droSec2 scaffold_39:33156-33402 + AATGCTTAGTTAAAAATCCTAGGTTCCATGCAAGAAGCAAACACATTGATATTAAGTATCATCATGTAAG---AGATAT-ATATAAGGATAAAATTGTAAGCATTAGTTATGTTCCCACTGAAGACATGATAGCGGATGTGTTAACAAAGAACTTAAGTAGAATTAAGCATAATAGATGTATTAAGCTAATGGGAATGTTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTTGAGAAGGAGTGTTGAATA----TA--------TA-A
droYak3 v2_chr2L_random_010:45300-45531 - AATGTTTAGTAAAAAATGGCACTTTCCATTCACGTAGTAAACATATTAATATTAAATATCATGATATATG---ACAAATTGTATAAGGAAAAGATAATTGAAATTAACTATGTTTCAACAGAAAACATGATATCAGATTTATTAACAAAGAATTTGAATCGAGTTAAGCATGAGAAATGTATTAAAATGATATGATTGTATTGA--------------------------------------------------------------TTGCGTTGACAAGGAGTGTTGAATT----TC--------TATA
droEre2 scaffold_4804:96020-96262 + AGCAGTTGGCAAAGAATCCTGTACATCATTCAAGGTCAAAACATATGGACATCAGGTATCTCTTACAAAGTGAAGGAAG-GGTTAAGGAAGGGCAGATTATTTTAAAGTATCTTTCAACTAAACAAATGATTGCAGATATATTAACGAAGAACCTTCAGAAACAAAAGCATTGTGAGCTTACGAAGAAGTTAAGTTTATACTAA--AA-------TA--------------------TAAT----A-------T---GAG-AGC--ATACATTGAGAAAAAGTGTTGAAA-------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AATGTCTTGCTAAAGATGCCAAATTTCATTCACGTAGCAAGCATATTGAAGTAAAATATCATTTTGTAAG---GGAGAT-GTATAAAGAAAATGTAATAGATATCAAATACATTCCCACAGATAGTATGACCTCAGATATATTAACAAAGAACTTATGTAAGGTCAAACATATAAAGTTTACAGAAATGTTGGGATTAAAATAA--TT-------T------------------TT--GT---ATAAG------AT--AG-ACT--TCGCGTTGAGAAGGAGTGTTAAGAT-----A------TGTATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................AATGTTGGGATTAAAATAA--TT-------T------------------TT--GT---..................................................................2680.13100100
..........................................................................................................................................................................................................AA--TT-------T------------------TT--GT---ATAAG------AT--AG-ACT--TCGCGT.....................................27110.09100010
............................................................................................................TACATTCCCACAGATAGTATG....................................................................................................................................................................................21130.08100010
.........................................................................................................................................................................................AATGTTGGGATTAAAATAA--T......................................................................................................20140.07100100
.......................................................................................................................................................................................................................................................G------AT--AG-ACT--TCGCGTTGAGAAGGAGT..........................25140.07100100
.................................................................................................................................ACCTCAGATATATTAACAAAGAACT...........................................................................................................................................................25140.07101000
.........................................................................................................................................TATATTAACAAAGAACTTATGTAAG...................................................................................................................................................25150.07101000
.................................................................................................TAGATATCAAATACATTCCCACAGA...........................................................................................................................................................................................25150.07101000
............................................................................................................................................................................TAAAGTTTACAGAAATGTTGGGATTT...............................................................................................................26150.07100010
..........................CATTCACGTAGCAAGCATATTG.....................................................................................................................................................................................................................................................................22160.06101000
..........................CATTCACGTAGCAAGCATATTGA....................................................................................................................................................................................................................................................................23160.06101000
................................................................................................ATAGATATCAAATACATTCCCACA.............................................................................................................................................................................................24170.06101000
.....................................................................................................................ACAGATAGTATGACCTCAGATAT.........................................................................................................................................................................23200.05101000
.....................................................................................................................ACAGATAGTATGACCTCAGATA..........................................................................................................................................................................22200.05101000
droVir3
AGTGCTTAGAAAAAAATCGAATTTTACATAAACGTAGTAAGCACATCGATATAAAGTTTCACCATGTACG---CGAGCT-ATATTCTAAGAACGAAATAGATGTTAAATATATAGGTACTAATGATATGATTGCCGATGTACTAACTAAAAATTTGCAAAAGAACAAGCATGTAAAATGTATTAATGAAATGAATTGTTATTAA--TA-------AG---------------------------------TTT-TTAAGTATGT--AATTGTTGAGAAGGAGTATTGAAAT-----A------TGCATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................AAACGTAGTAAGCACATCGATATAAAGT............................................................................................................................................................................................................................................................28158.4712700180300000000000000000103102324303310812024000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATAAAG.............................................................................................................................................................................................................................................................27157.07106006020200000000000000000512212334542070613000000000000000000000000
.............................AAACGTAGTAAGCACATCGATA..................................................................................................................................................................................................................................................................22154.737100306230000002000000000210441023230060801000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACT......................................................................................................................................................................2373.2923004000100000000000001001508020000000001000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATA................................................................................................................................................................................................................................................................24153.2048005000000000000000001000238901261000406000000000000000000000000
.......................................................................................................................................................................................AATGAAATGAATTGTTATTAA--TA-------AG---------------------------------TT.........................................................27143.14440030100000000100000000003191100020090310000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATGTAT...............................................................................................................................25163.004800000000000000000000000230161531202000310000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTAAC...................................................................................................................................................................2673.00211020000000001000000000000010410000000101000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTAC.......................................................................................................................................................................2271.8613002000200000000000000001302101000000010000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTA.....................................................................................................................................................................2471.8613002000200010000000000000400210000000010000000000000000000000000
.............................AAACGTAGTAAGCACATCGATAT.................................................................................................................................................................................................................................................................23151.7326003020000000000000000002038320001000101000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTGCCGATG..........................................................................................................................................................................27111.7319005010000000000000000000000810010000100000000000000000000000002
........................................................................................................................AATGATATGATTGCCGATGTACTAA....................................................................................................................................................................2571.7112000000100000100000000000107010000001000000000000000000000000000
.......................................................................................................................................................................................AATGAAATGAATTGTTATTAA--TA-------AG---------------------------------T..........................................................26141.6423006000000000010000000000032500020020200000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATAAA..............................................................................................................................................................................................................................................................26151.6024000020000000000000000000263431000010100000000000000000000100000
........................................................................................................................AATGATATGATTGCCGATGTACTAACT..................................................................................................................................................................2771.5711104000000010000000000000004100000000000000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTGCC..............................................................................................................................................................................23121.0813000000000000000000000000002700000100200000001000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATGT.................................................................................................................................23160.8814000000000000000000000000204520000000100000000000000000000000000
.............................AAACGTAGTAAGCACATCGAT...................................................................................................................................................................................................................................................................21150.8713000020000000000000000001112200000021100000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAA.........................................................................................................................................................................................................23150.8713001020000000000000000001102410010000000000000000000000000000000
................................................................................................ATAGATGTTAAATATATAGGTACTAA...........................................................................................................................................................................................26140.7911000000000000000000000000030003000050000000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATGTATT..............................................................................................................................26160.7512001000000000000000000000016210000000100000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTGCCGAT...........................................................................................................................................................................26120.759000010000000000000000000000500000100100000000000000000000000001
.............................AAACGTAGTAAGCACATCGATATAA...............................................................................................................................................................................................................................................................25150.7311000010000000000000000001001220000101101000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTGCCG.............................................................................................................................................................................24120.678001011000000000000000000000200010000002000000000000000000000000
.......................................................................................................................................................................................AATGAAATGAATTGTTATTAA--TA-------A.............................................................................................24180.6712000010000000000000000001014400000010000000000000000000000000000
.......................................................................................................................................................................................AATGAAATGAATTGTTATTAA--TA-------AG---------------------------------TTT-.......................................................28130.628002000000000000000000000012100010010000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATA.......................................................................................................................................................................................................25150.609000010000000000000000000000311002001000000000000000000000000000
.......................................................................................................................................................................................AATGAAATGAATTGTTATTAA--TA-------AG---------------------------------...........................................................25150.609000000000000000000000000201500000000100000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTA........................................................................................................................................................................2170.574002000000000000000000000000000000001001000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTC.....................................................................................................................................................................2470.574000100000000000000000000102000000000000000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATGTA................................................................................................................................24160.569000000000000000000000000203100101000001000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATATA.....................................................................................................................................................................................................27150.538003000000000000000000000001100000001101000000000000000000000000
..................................................................................................................................................................................................................................................................................AGAAGGAGTATTGAAAT-----A------TGCAT.2320.501000001000000000000000000000000000000000000000000000000000000000
..............................AACGTAGTAAGCACATCGATATAAAGT............................................................................................................................................................................................................................................................27150.477002000000000000000000002000000100000101000000000000000000000000
............................TAAACGTAGTAAGCACATCGATATAAAGT............................................................................................................................................................................................................................................................29150.477007000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGT.........................................................................................................................................................................2070.433000000000000000000000002000000000000010000000000000000000000000
....................................................................................................................TACTAATGATATGATTGCCGATGTAC.......................................................................................................................................................................2670.433000000000000000000000000001010100000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTAACC..................................................................................................................................................................2770.433101000000000000000000000000010000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCG.....................................................................................................................................................................................................................................................................19170.417000000000000000000000001002100001000101000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAAT........................................................................................................................................................................................................24150.406001020000000000000000000100100001000000000000000000000000000000
............................TAAACGTAGTAAGCACATCGATATA................................................................................................................................................................................................................................................................25150.406001000000000000000000000000000200030000000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATG..................................................................................................................................22160.386000000000000100000000000000020000001002000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATAT......................................................................................................................................................................................................26150.335001000000000110000000000000000200000000000000000000000000000000
......................................................................................TAAGAACGAAATAGATGTTAAATAT......................................................................................................................................................................................................25150.335000001000000000000000000100300000000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTT............................................................................................................................................................................................................20150.335000000000001110000000000000000000000100000000000000000000000100
.........................................................................................................................................................TTGCAAAAGAACAAGCATGTAAAATG..................................................................................................................................26150.335000000000000000000000000001111000001000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATG..........................................................................................................................................................................19120.334001001000000000000000000000010000000010000000000000000000000000
...................................................................................................................GTACTAATGATATGATTGCCGATG..........................................................................................................................................................................24120.334000010000010000000000000100010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTT-TTAAGTATGT--AATTGTTGAGAAG..............................2630.331000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................T--AATTGTTGAGAAGGAGTATTGAAAT-----A------......2730.331000000000000000000000000000000010000000000000000000000000000000
......................................................................................TAAGAACGAAATAGATGTTAAATATAT....................................................................................................................................................................................................27130.314000000000000000000000000001200000000100000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTGC...............................................................................................................................................................................22130.314000000000000000000000000100210000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGA....................................................................................................................................................................................................................................................................20170.295000000000000010000000000010000101000100000000000000000000000000
.....................................................................................................................ACTAATGATATGATTGCCGATGT.........................................................................................................................................................................2370.292001000000000000000000000000000100000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTTT....................................................................................................................................................................2570.292000100000000000000000000000100000000000000000000000000000000000
.....................................................................................................................ACTAATGATATGATTGCCGATGTACTA.....................................................................................................................................................................2770.292000000000000000000000000000000011000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTT.....................................................................................................................................................................2470.292000000000000000000000000001000000000100000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACA......................................................................................................................................................................2370.292001000000000000000000000001000000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATAAAA.............................................................................................................................................................................................................................................................27150.274001000000000000000000000100000000000200000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTA...........................................................................................................................................................................................................21150.274000000000000000000000001000200000000001000000000000000000000000
...............................................................................................................................................................................................................................................................TAAGTATGT--AATTGTTGAGAAGGAG...........................2540.251000001000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATGTATTAA............................................................................................................................28160.254000000100000000000000000100200000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAAGTATGT--AATTGTTGAGAAGGAGTA.........................2740.251000000000000000000000000000001000000000000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTG................................................................................................................................................................................21130.233000010100000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................AATGAAATGAATTGTTATTAA--TA-------..............................................................................................23180.224000000000000000000000000102000001000000000000000000000000000000
................................................................................................ATAGATGTTAAATATATAGGTACTA............................................................................................................................................................................................25140.213000000000000000000000000020000000010000000000000000000000000000
......................................................................................TAAGAACGAAATAGATGTTAAAT........................................................................................................................................................................................................23150.203000000000000000000000000000000110000001000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATC................................................................................................................................................................................................................................................................24150.203001000000000000000000000001010000000000000000000000000000000000
............................TAAACGTAGTAAGCACATCGATATAAAG.............................................................................................................................................................................................................................................................28150.203002000000001000000000000000000000000000000000000000000000000000
..............................AACGTAGTAAGCACATCGATATA................................................................................................................................................................................................................................................................23150.203000000000000000000000000010101000000000000000000000000000000000
.......................................................GTTTCACCATGTACG---CGAGCT-ATATTC...............................................................................................................................................................................................................................27100.202001000000000000000000000010000000000000000000000000000000000000
..........................................................TCACCATGTACG---CGAGCT-ATATTCT..............................................................................................................................................................................................................................25100.202000000000000000000000000010000000000100000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATT................................................................................................................................................................................................................................................................24150.203000000000000000000000000001200000000000000000000000000000000000
.........................................................TTCACCATGTACG---CGAGCT-ATATTC...............................................................................................................................................................................................................................25100.202000000000000000000000001000000100000000000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATGTATTC.............................................................................................................................27160.193000000000000000000000000000210000000000000000000000000000000000
............................................................................................................................................................CAAAAGAACAAGCATGTAAAATGTAT...............................................................................................................................26160.193000000000000000000000000001011000000000000000000000000000000000
..............................................................................................................TATAGGTACTAATGATATGATTGC...............................................................................................................................................................................24110.182000000000000000000000000000010100000000000000000000000000000000
...........................................................................................ACGAAATAGATGTTAAATATATAGG.................................................................................................................................................................................................25110.182000000000000000000000000000020000000000000000000000000000000000
...................................................TAAAGTTTCACCATGTACG---CGAGCT-A....................................................................................................................................................................................................................................26110.182000000000000000000001000000000010000000000000000000000000000000
..........................................................TCACCATGTACG---CGAGCT-ATAT.................................................................................................................................................................................................................................22110.182000000000000000000000000001000000010000000000000000000000000000
..........................................................TCACCATGTACG---CGAGCT-ATATT................................................................................................................................................................................................................................23110.182000010000000000000000000001000000000000000000000000000000000000
.............................AAACGTAGTAAGCACATC......................................................................................................................................................................................................................................................................18170.183001000000000000000000000001000100000000000000000000000000000000
.......................................................................................................................................................................................AATGAAATGAATTGTTATT...........................................................................................................19180.173001000000000000000000000000200000000000000000000000000000000000
................................................................TGTACG---CGAGCT-ATATTCT..............................................................................................................................................................................................................................19120.172000000010000000000000000001000000000000000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTGCCGA............................................................................................................................................................................25120.172000000000000000000000000000000000000001000000000000000000000001
................................................................................................................................................................................................................................................................AAGTATGT--AATTGTTGAGAAGGAG...........................2460.171000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................................ATTAATGAAATGAATTGTTC.............................................................................................................20190.163000003000000000000000000000000000000000000000000000000000000000
.......................................AGCACATCGATATAAAGTTTCACCATG...................................................................................................................................................................................................................................................27130.152000000000000000000000000000020000000000000000000000000000000000
...................................................................................................................GTACTAATGATATGATTGCCGA............................................................................................................................................................................22130.152000000010000000000000000000100000000000000000000000000000000000
....................................................................................................ATGTTAAATATATAGGTACTAATGATA......................................................................................................................................................................................27130.152001000000000000000000000000000010000000000000000000000000000000
.................................................................................................TAGATGTTAAATATATAGGTACTAAT..........................................................................................................................................................................................26140.142000000000000000000000000010000000010000000000000000000000000000
................................................................................................................................GATTGCCGATGTACTAACTAAAAATT...........................................................................................................................................................2670.141000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................TGATTGCCGATGTACTAACTAAAAATT...........................................................................................................................................................2770.141000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................GTACTAATGATATGATTGCCGATGT.........................................................................................................................................................................2570.141001000000000000000000000000000000000000000000000000000000000000
................................................................................................ATAGATGTTAAATATATAGGTACT.............................................................................................................................................................................................24140.142000000000000000000000000000000000020000000000000000000000000000
.......................................................................................................................TAATGATATGATTGCCGATGTACTAAC...................................................................................................................................................................2770.141000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTAG....................................................................................................................................................................2570.141000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTAAA...................................................................................................................................................................2670.141000000000000000000000000000000000000000000100000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTTCT...................................................................................................................................................................2670.141000000000000000000000000100000000000000000000000000000000000000
.................................................................................................TAGATGTTAAATATATAGGTACTAA...........................................................................................................................................................................................25140.142000000000000000000000000010010000000000000000000000000000000000
.........................................................................................................................ATGATATGATTGCCGATGTACTAAC...................................................................................................................................................................2570.141001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ATATGATTGCCGATGTACTAAC...................................................................................................................................................................2270.141000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTAT.......................................................................................................................................................................2270.141000000000000000000000000000000000001000000000000000000000000000
................................................................................................ATAGATGTTAAATATATAGGTAC..............................................................................................................................................................................................23140.142000000000000000000000000020000000000000000000000000000000000000
.............................................................................CT-ATATTCTAAGAACGAAATAGATGT.............................................................................................................................................................................................................26140.142000000000000000000000000020000000000000000000000000000000000000
.....................................................................................................................ACTAATGATATGATTGCCGATGTACT......................................................................................................................................................................2670.141000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................ACTAATGATATGATTGCCGATGTA........................................................................................................................................................................2470.141000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................TAATGATATGATTGCCGATGTT........................................................................................................................................................................2270.141000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................ACTAATGATATGATTGCCGATGTTG.......................................................................................................................................................................2570.141000000100000000000000000000000000000000000000000000000000000000
...................................................................ACG---CGAGCT-ATATTCTAAGAACG.......................................................................................................................................................................................................................23140.142000000000000000000000000000010000000000000000000000000000000010
.....................................................................................................................ACTAATGATATGATTGCCGATGTAC.......................................................................................................................................................................2570.141000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACTG.....................................................................................................................................................................2470.141001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TACTAATGATATGATTGCCGATGTACT......................................................................................................................................................................2770.141000000000000000000000000100000000000000000000000000000000000000
................................................................................................ATAGATGTTAAATATATAGGTA...............................................................................................................................................................................................22140.142000000000000000000000000020000000000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAA..........................................................................................................................................................................................................22150.132000000000000000000000000000110000000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGT.............................................................................................................................................................................................................19150.132001000000000000000000000000000000000001000000000000000000000000
............................TAAACGTAGTAAGCACATCGATATAA...............................................................................................................................................................................................................................................................26150.132002000000000000000000000000000000000000000000000000000000000000
...................................AGTAAGCACATCGATATAAAGTTTCA........................................................................................................................................................................................................................................................26150.132000000000000000000000000000000100000010000000000000000000000000
...............................ACGTAGTAAGCACATCGATATAAAG.............................................................................................................................................................................................................................................................25150.132001000000000000000000000000000010000000000000000000000000000000
..............................AACGTAGTAAGCACATCGATA..................................................................................................................................................................................................................................................................21150.132001010000000000000000000000000000000000000000000000000000000000
..............................AACGTAGTAAGCACATCGATATAAAG.............................................................................................................................................................................................................................................................26150.132000000000000000000000000000010000000100000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATAAAT.............................................................................................................................................................................................................................................................27150.132000000000000000000000000001100000000000000000000000000000000000
............................TAAACGTAGTAAGCACATCGATATAAA..............................................................................................................................................................................................................................................................27150.132001000000000000000000000000001000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATAAAGA............................................................................................................................................................................................................................................................28150.132000000000000000000000000000100000010000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATAATT...............................................................................................................................................................................................................................................................25150.132000000000000000000000000000100000010000000000000000000000000000
.......................................................................................AAGAACGAAATAGATGTTAAAT........................................................................................................................................................................................................22150.132000000000100000000000000001000000000000000000000000000000000000
......................................................................................TAAGAACGAAATAGATGTT............................................................................................................................................................................................................19150.132000000000100000000000000000010000000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAACC.......................................................................................................................................................................................................25150.132000000000000000000000000000020000000000000000000000000000000000
......................................................................................TAAGAACGAAATAGATGTTAAATATA.....................................................................................................................................................................................................26150.132001000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................TTGCAAAAGAACAAGCATGTAAAATGTA................................................................................................................................28150.132000000000000000000000000101000000000000000000000000000000000000
..............................................................................T-ATATTCTAAGAACGAAATAGATG..............................................................................................................................................................................................................24150.132000000000000000000000000000100010000000000000000000000000000000
..........................................................................................................................................................TGCAAAAGAACAAGCATGTAA......................................................................................................................................21160.132000001000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................TACTAACTAAAAATTTGCAAAAGAAC................................................................................................................................................2680.131001000000000000000000000000000000000000000000000000000000000000
......................TTTACATAAACGTAGTAAGCACATCGA....................................................................................................................................................................................................................................................................27160.132000100000000000000000000000010000000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGATGTACC......................................................................................................................................................................2380.131000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAAT...................................................................................................................................21160.132000000000000000000000000000100000000010000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATGTATTA.............................................................................................................................27160.132000000000000000000000000000100000001000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATATC.....................................................................................................................................................................................................27160.132000000000000000000000000001000000100000000000000000000000000000
...........................................................................................................................................TACTAACTAAAAATTTGCAAAAGAACA...............................................................................................................................................2780.131000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................GTATTAATGAAATGAATTGTTATTAA--.......................................................................................................26180.112000000000000000000000000000000200000000000000000000000000000000
.................................................TATAAAGTTTCACCATGTACG---CGAGC.......................................................................................................................................................................................................................................2690.111000000000000000000000000000010000000000000000000000000000000000
.................................................TATAAAGTTTCACCATGTACG---CGAGCT-A....................................................................................................................................................................................................................................2890.111000000000000000000000000000000100000000000000000000000000000000
...........................................................CACCATGTACG---CGAGCT-ATATTCTCC............................................................................................................................................................................................................................26100.101001000000000000000000000000000000000000000000000000000000000000
...............................................GATATAAAGTTTCACCATGTACG---CGA.........................................................................................................................................................................................................................................26100.101000000000000000000000000001000000000000000000000000000000000000
..........................................................TCACCATGTACG---CGAGCT-ATATTCTAA............................................................................................................................................................................................................................27100.101000000000000000000000000000000000010000000000000000000000000000
..........................................................TCACCATGTACG---CGAGCT-ATATTCC..............................................................................................................................................................................................................................25100.101001000000000000000000000000000000000000000000000000000000000000
..........................................................TCACCATGTACG---CGAGCT-ATATTC...............................................................................................................................................................................................................................24100.101000000000000000000000000000000000000001000000000000000000000000
.............................................TCGATATAAAGTTTCACCATGTACG---CG..........................................................................................................................................................................................................................................27100.101000000000000000000000000000000000000100000000000000000000000000
...........................................................CACCATGTACG---CGAGCT-ATATTCTAAG...........................................................................................................................................................................................................................27100.101000000000000000000000000000001000000000000000000000000000000000
...........................................CATCGATATAAAGTTTCACCATGTAC................................................................................................................................................................................................................................................26100.101000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................ATAGGTACTAATGATATGATTGCC..............................................................................................................................................................................24100.101001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................ATAGGTACTAATGATATGATTGC...............................................................................................................................................................................23110.091000000000000000000000000001000000000000000000000000000000000000
...................................................TAAAGTTTCACCATGTACG---CGAG........................................................................................................................................................................................................................................23110.091000000000000000000000000001000000000000000000000000000000000000
............................................................................................................TATATAGGTACTAATGATATGATTGC...............................................................................................................................................................................26110.091000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................ATAGGTACTAATGATATGATTG................................................................................................................................................................................22110.091000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................ATATAGGTACTAATGATATGATTG................................................................................................................................................................................24110.091000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................ATATAGGTACTAATGATATGATT.................................................................................................................................................................................23110.091000000000000000000000000000000010000000000000000000000000000000
......................................................AGTTTCACCATGTACG---CGAGC.......................................................................................................................................................................................................................................21110.091000000000000000000000000000000000001000000000000000000000000000
............................................................................................CGAAATAGATGTTAAATATATAGGTAC..............................................................................................................................................................................................27110.091000000000000000000000000000001000000000000000000000000000000000
.........................................................TTCACCATGTACG---CGAGCT-ATATT................................................................................................................................................................................................................................24110.091000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................AGGTACTAATGATATGATTGCCGATG..........................................................................................................................................................................26110.091001000000000000000000000000000000000000000000000000000000000000
...................................................TAAAGTTTCACCATGTACG---CGAGC.......................................................................................................................................................................................................................................24110.091000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................TATAGGTACTAATGATATGATCC................................................................................................................................................................................23110.091000000000000000000000000000100000000000000000000000000000000000
........................................................................................AGAACGAAATAGATGTTAAATATATAGG.................................................................................................................................................................................................28110.091000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................ACTAACTAAAAATTTGCAAAAGAACAAG.............................................................................................................................................28120.081000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................AGGTACTAATGATATGATTGCCGAT...........................................................................................................................................................................25120.081000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................GATATGATTGCCGATG..........................................................................................................................................................................16120.081000000000000000000000000000000000000000000000000000000000100000
....................................................AAAGTTTCACCATGTACG---CGA.........................................................................................................................................................................................................................................21120.081000000000000000000000000100000000000000000000000000000000000000
..................................................ATAAAGTTTCACCATGTACG---CG..........................................................................................................................................................................................................................................22120.081001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CTAACTAAAAATTTGCAAAAGAACAAGC............................................................................................................................................28120.081001000000000000000000000000000000000000000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTGCCGATC..........................................................................................................................................................................27120.081000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................AGGTACTAATGATATGATTGCCGA............................................................................................................................................................................24120.081001000000000000000000000000000000000000000000000000000000000000
............................................................ACCATGTACG---CGAGCT-ATATT................................................................................................................................................................................................................................21120.081000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................TACTAATGATATGATTGCCGATG..........................................................................................................................................................................23120.081000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................ACTAATGATATGATTGCCGAT...........................................................................................................................................................................21130.081000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................AATGATATGATTGCCGAT...........................................................................................................................................................................18130.081000000000000000000000000000000100000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATATATC...................................................................................................................................................................................................29130.081001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TACTAATGATATGATTGCCGA............................................................................................................................................................................21130.081000000000000000000000000000010000000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATATAT....................................................................................................................................................................................................28130.081001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ATGAAATGAATTGTTATTAA--TA-------AG---------------------------------TTT-.......................................................27130.081000000000000000000000000001000000000000000000000000000000000000
.............................................TCGATATAAAGTTTCACCATGTA.................................................................................................................................................................................................................................................23130.081000000000000000000000000000100000000000000000000000000000000000
........................................GCACATCGATATAAAGTTTCACCATGT..................................................................................................................................................................................................................................................27130.081000000000000000000000000000000000000000100000000000000000000000
................................................................................................................TAGGTACTAATGATATGATT.................................................................................................................................................................................20130.081000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................TGAAATGAATTGTTATTAA--TA-------AG---------------------------------TTT-.......................................................26130.081000000000000000000000000000000100000000000000000000000000000000
................................................................................................................TAGGTACTAATGATATGATTGCA..............................................................................................................................................................................23130.081000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................TACTAATGATATGATTGCCGAT...........................................................................................................................................................................22130.081000001000000000000000000000000000000000000000000000000000000000
.........................ACATAAACGTAGTAAGCACATCGATA..................................................................................................................................................................................................................................................................26140.071000000000000000000000001000000000000000000000000000000000000000
................................................................................................ATAGATGTTAAATATATAGGTACGT............................................................................................................................................................................................25140.071000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AATTTGCAAAAGAACAAGCATGT........................................................................................................................................23140.071000000000000000000000000000010000000000000000000000000000000000
.................................................................................................TAGATGTTAAATATATAGGTAC..............................................................................................................................................................................................22140.071000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................AATGAAATGAATTGTTATTAA--TA-------AG---------------------------------TTC-.......................................................28140.071001000000000000000000000000000000000000000000000000000000000000
...................................................................ACG---CGAGCT-ATATTCTAAGAACGA......................................................................................................................................................................................................................24140.071000000000000000000000000010000000000000000000000000000000000000
................................................................................................ATAGATGTTAAATATATAGGTACTAAT..........................................................................................................................................................................................27140.071000000000000000000000000000000000010000000000000000000000000000
................................................................................................ATAGATGTTAAATATATAGGTACTAATC.........................................................................................................................................................................................28140.071000000000000000000000000010000000000000000000000000000000000000
..................................................................TACG---CGAGCT-ATATTCTAAGAACGA......................................................................................................................................................................................................................25140.071000000000000000000000000000000000010000000000000000000000000000
.............................................................................CT-ATATTCTAAGAACGAAATAGATG..............................................................................................................................................................................................................25140.071000000000000000000000000000010000000000000000000000000000000000
..................................................................TACG---CGAGCT-ATATTCTAAGAACGAAA....................................................................................................................................................................................................................27140.071000000000000000000000000000000100000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATG..............................................................................................................................................................................................................18150.071000000000000000000000000000000000000001000000000000000000000000
......................................................................................TAAGAACGAAATAGATGTTAAATA.......................................................................................................................................................................................................24150.071000000000000000000000000000000000100000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATTC......................................................................................................................................................................................................26150.071000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................TTTGCAAAAGAACAAGCATG.........................................................................................................................................20150.071000000000000000000000000000100000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATCA.................................................................................................................................................................................................................................................................23150.071000000000000000000000001000000000000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATC.......................................................................................................................................................................................................25150.071001000000000000000000000000000000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATAAT..............................................................................................................................................................................................................................................................26150.071000000000000000000000001000000000000000000000000000000000000000
.......................................................................................AAGAACGAAATAGATGTTAAATATA.....................................................................................................................................................................................................25150.071000000000000000000000000000000000001000000000000000000000000000
..............................AACGTAGTAAGCACATCGATATAAAGA............................................................................................................................................................................................................................................................27150.071001000000000000000000000000000000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATAAT................................................................................................................................................................................................................................................................24150.071000000000000000000000000001000000000000000000000000000000000000
........................................................................................AGAACGAAATAGATGTTAAATATA.....................................................................................................................................................................................................24150.071001000000000000000000000000000000000000000000000000000000000000
.....................................................................................CTAAGAACGAAATAGATGTTAAATG.......................................................................................................................................................................................................25150.071000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................TTGCAAAAGAACAAGCATGTAAAATGTAT...............................................................................................................................29150.071000000000000000000000000001000000000000000000000000000000000000
...............................ACGTAGTAAGCACATCGATATAAAGT............................................................................................................................................................................................................................................................26150.071000000000000000000000000000000000000010000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATAT...............................................................................................................................................................................................................................................................25150.071000000000000000000000000001000000000000000000000000000000000000
....................................................................................TCTAAGAACGAAATAGATGTTAAAT........................................................................................................................................................................................................25150.071000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................TAATGAAATGAATTGTTATTAA--TA-------AG---------------------------------...........................................................26150.071001000000000000000000000000000000000000000000000000000000000000
...................................AGTAAGCACATCGATATAAAGTTTC.........................................................................................................................................................................................................................................................25150.071001000000000000000000000000000000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATTT...............................................................................................................................................................................................................................................................25150.071001000000000000000000000000000000000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATATTA.............................................................................................................................................................................................................................................................27150.071000000000000000000000000000000001000000000000000000000000000000
..................................................................................ATTCTAAGAACGAAATAGATGTTAAAT........................................................................................................................................................................................................27150.071000000000000000000000000000100000000000000000000000000000000000
....................................................................................TCTAAGAACGAAATAGATGTTAAATAT......................................................................................................................................................................................................27150.071000000000000000000000000000000100000000000000000000000000000000
.............................AAACGTAGTAAGCACATCGATATAAAAA............................................................................................................................................................................................................................................................28150.071000000000000000000000000000100000000000000000000000000000000000
..............................AACGTAGTAAGCACATCGATATAAAGTT...........................................................................................................................................................................................................................................................28150.071001000000000000000000000000000000000000000000000000000000000000
................................CGTAGTAAGCACATCGATATAA...............................................................................................................................................................................................................................................................22160.061000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................AAAAGAACAAGCATGTAAAATGTATC..............................................................................................................................26160.061000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................CAAAAGAACAAGCATGTAAAATGTCC...............................................................................................................................26160.061000000000000000000000000000010000000000000000000000000000000000
.................................GTAGTAAGCACATCGATATAAAGTT...........................................................................................................................................................................................................................................................25160.061000000000000000000000000000000100000000000000000000000000000000
.................................GTAGTAAGCACATCGATATAAAGT............................................................................................................................................................................................................................................................24160.061000010000000000000000000000000000000000000000000000000000000000
droMoj3
AATGCCTTGCTAAAGATGCAAAATATCATTCACGTAGCAAGCATATTGAAATAAAATACCATTTTGTAAG---GGAAAT-GTACAAAAATAAAGTTATTGATATAAAGTACATTCCCACAGATGAAATGAAAGCAGATGTATTGACGAAGAATTTATGTAAAGTCAAACATGAGAAATTTACTGAAATGTTAGGTTTAAAATGA--AA-------CAT----T----------TTT--GT---AAA--------AT--AG-ACA--TCGCGTTGAGAAGGAGTGTTAAAAT----TA------TGTATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................AGCAGATGTATTGACGAAGAATTTATG.......................................................................................................................................................27180.6111710012
...................................................................................................................................AGCAGATGTATTGACGAAGAATTTAT........................................................................................................................................................26180.336500001
...................................................................................................................................AGCAGATGTATTGACGAAGAATTT..........................................................................................................................................................24190.163100002
........................................GCATATTGAAATAAAATACCATTTTG...................................................................................................................................................................................................................................................26200.153300000
...........................................................................................AAGTTATTGATATAAAGTACATTCC.................................................................................................................................................................................................25140.142200000
...................................................................................................................................AGCAGATGTATTGACGAAGAATT...........................................................................................................................................................23190.112200000
.................GCAAAATATCATTCACGTAG................................................................................................................................................................................................................................................................................20130.081100000
................TGCAAAATATCATTCACGTAG................................................................................................................................................................................................................................................................................21130.081100000
.......................................................................................AATAAAGTTATTGATATAAAGTACAT....................................................................................................................................................................................................26140.071100000
.......................................................................................AATAAAGTTATTGATATAAAGTACATC...................................................................................................................................................................................................27140.071100000
................................................................................................................................................................................ATTTACTGAAATGTTAGGTTTAAAA............................................................................................................25140.071100000
...........................................................................................AAGTTATTGATATAAAGTACATTCCCA...............................................................................................................................................................................................27140.071100000
...........................................................................................AAGTTATTGATATAAAGTACATTCCCAC..............................................................................................................................................................................................28140.071100000
.................................................................................................................................................................................TTTACTGAAATGTTAGGTTTAAAATG..........................................................................................................26150.071100000
......................................................................................................................................................................................TGAAATGTTAGGTTTAAAATGA--AA-------CAT----T----------............................................................................28150.071000010
.................................................................................................TTGATATAAAGTACATTCCCACAGA...........................................................................................................................................................................................25160.061100000
...............................................................................................TATTGATATAAAGTACATTCCCACAG............................................................................................................................................................................................26160.061100000
.......................................................................................................TAAAGTACATTCCCACAGATGAAATGAA..................................................................................................................................................................................28170.061100000
................................................................................................................TTCCCACAGATGAAATGAA..................................................................................................................................................................................19170.061100000
.............................................................................................................................AATGAAAGCAGATGTATTGACGAAGAAT............................................................................................................................................................28180.061100000
...................................................................................................................................AGCAGATGTATTGACGAAGAATTTATCCC.....................................................................................................................................................29180.061100000
.....................................................................................................................ACAGATGAAATGAAAGCAGAT...........................................................................................................................................................................21180.061000001
....................................................................................................................CACAGATGAAATGAAAGCAGATGTA........................................................................................................................................................................25180.061100000
.............................................................................................................................AATGAAAGCAGATGTATTGACGA.................................................................................................................................................................23180.061100000
...............................................................................................................................TGAAAGCAGATGTATTGACGAAG...............................................................................................................................................................23180.061000001
...................................................................................................................................AGCAGATGTATTGACGAAGA..............................................................................................................................................................20190.051100000
....................................................................................................................................GCAGATGTATTGACGAAGAATTT..........................................................................................................................................................23190.051100000
...................................................................................................................................AGCAGATGTATTGACGAAG...............................................................................................................................................................19190.051100000
...................................................................................................................................AGCAGATGTATTGACGAAGAATTTA.........................................................................................................................................................25190.051100000
........................................GCATATTGAAATAAAATACCATT......................................................................................................................................................................................................................................................23200.051100000
.......................................AGCATATTGAAATAAAATACCATTTTG...................................................................................................................................................................................................................................................27200.051100000
droGri2
AATGCTTGTCAAAAGATGCTAAGTTCCATGCGCGTAGTAAGCATATCGACATTAAATATCATCATATCAG---AGATATGGTAAAAAAATAATGTAGTTGAAATTGAATATGTACCTAGCAAAAACATGATCTCTGATGTGTTAACGAAAAACTTTTGTAAAGTAAAGCATAAGGAATTTGTTAACTTAATGGGTTTGCACTGA--ATATGTAAAAGTTT-CT----------TTT--GT---TTAAGAAGAA-GTAGAC-AAA--CTGCGTTGAGAAGGAGTGTTTGAAATAATT--GTATTTGTCTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................TAGAC-AAA--CTGCGTTGAGAAGGAG...........................2480.13101
dp5
ATCATATTGCGAAAAATCCTATTCACCATAAACGCACAAAGCATATAGATTTAAAATATCATTTTGTTAG---AGACAA-AGTAGAAAGTAAAGAGATAAAACTTGAATATGTCCACACAG--AAAAACGTTGCCGATGTATTAACCAAAAGTTTATGTAAGCAAAAGCATTATAGATTTGTAAAATCGCTTGGATTAAT-TGA--TT-------AATACATT---------------GTAAT--C-------AC--AAA-ATATTATG-CTTAAGCAAAAGTGTTGAAAT---------------TTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................TAG---AGACAA-AGTAGAAAGTAAAGAGA....................................................................................................................................................................................................................26105.4054070000214310
...................................................................TAG---AGACAA-AGTAGAAAGTAAAGAG.....................................................................................................................................................................................................................25104.6046020000014300
........................................................................................................TGAATATGTCCACACAG--AAAAACGT..................................................................................................................................................................................2512.0020000000020
................................................................TGTTAG---AGACAA-AGTAGAAAGTAAAGA......................................................................................................................................................................................................................27101.601601000000150
...................................................................TAG---AGACAA-AGTAGAAAGTAAAGA......................................................................................................................................................................................................................24101.60160300001480
..................................................................TTAG---AGACAA-AGTAGAAAGTAAAGAG.....................................................................................................................................................................................................................26101.301302000010100
.................................................................GTTAG---AGACAA-AGTAGAAAGTAAAG.......................................................................................................................................................................................................................25101.20120000000480
.........................................................................AGACAA-AGTAGAAAGTAAAGAGA....................................................................................................................................................................................................................23101.20120100000911
.................................................................................................TAAAACTTGAATATGTCCACACAG--AAA.......................................................................................................................................................................................2711.0010100000000
..................................................................TTAG---AGACAA-AGTAGAAAGTAAAGA......................................................................................................................................................................................................................25100.8080300002030
...................................................................TAG---AGACAA-AGTAGAAAGTAAAG.......................................................................................................................................................................................................................23100.7070100000150
...........................................................................................................................................................................TATAGATTTGTAAAATCGCTTGGAT.................................................................................................................25100.7070300000220
.......TGCGAAAAATCCTATTCACCATAAACG...................................................................................................................................................................................................................................................................................2760.6740200000200
.................................................................................GTAGAAAGTAAAGAGATAAAACT.............................................................................................................................................................................................................2390.6761500000000
..................................................................TTAG---AGACAA-AGTAGAAAGTAAAG.......................................................................................................................................................................................................................24100.6060100000230
.................................................................GTTAG---AGACAA-AGTAGAAAGTAAAGA......................................................................................................................................................................................................................26100.6060000000330
....................................................................AG---AGACAA-AGTAGAAAGTAAAGAGA....................................................................................................................................................................................................................25100.6060100000140
....................................................................AG---AGACAA-AGTAGAAAGTAAAGAG.....................................................................................................................................................................................................................24100.5050000000140
...........................................................CATTTTGTTAG---AGACAA-AGTAGAAAG............................................................................................................................................................................................................................26100.5050000000050
.................................................................GTTAG---AGACAA-AGTAGAAAGTAAA........................................................................................................................................................................................................................24100.5050100000040
................................................................TGTTAG---AGACAA-AGTAGAAAGTAAAG.......................................................................................................................................................................................................................26100.4040000000040
.................................................................GTTAG---AGACAA-AGTAGAAAGTAA.........................................................................................................................................................................................................................23100.4040000000400
..................................................................TTAG---AGACAA-AGTAGAAAGTAAA........................................................................................................................................................................................................................23100.4040000000040
................................................................TGTTAG---AGACAA-AGTAGAAAGTA..........................................................................................................................................................................................................................23100.4040000000040
...................................................................TAG---AGACAA-AGTAGAAAGTAAAGAGATA..................................................................................................................................................................................................................2890.3330200000010
.......TGCGAAAAATCCTATTCACC..........................................................................................................................................................................................................................................................................................2060.3320200000000
..............................................................TTTGTTAG---AGACAA-AGTAGAAAGT...........................................................................................................................................................................................................................24100.3030000000030
..............................................................TTTGTTAG---AGACAA-AGTAGAAAGTAA.........................................................................................................................................................................................................................26100.3030000000120
...........................................................................................................................................................................TATAGATTTGTAAAATCGCTTGGA..................................................................................................................24100.3030000000030
.........................................................................AGACAA-AGTAGAAAGTAAAG.......................................................................................................................................................................................................................20100.3030000000030
.....................................................................................................................................................................................................AAT-TGA--TT-------AATACATT---------------GTAAT--C-------AC--AA..................................................2690.2220000000200
.........................................................................AGACAA-AGTAGAAAGTAAAGAGATA..................................................................................................................................................................................................................2590.2220000000200
...............................................................................................................................................................................................................................................TAAT--C-------AC--AAA-ATATTATG-CTTAAG.................................2490.2220200000000
.........................................................................AGACAA-AGTAGAAAGTAAAGAGAT...................................................................................................................................................................................................................2490.2220000000200
..................................................................TTAG---AGACAA-AGTAGAAAGTAAAGAGA....................................................................................................................................................................................................................27100.2020100000010
................................................................TGTTAG---AGACAA-AGTAGAAAGTAAA........................................................................................................................................................................................................................25100.2020000000110
...........................................................................................................................................TATTAACCAAAAGTTTATGTAAGCA.................................................................................................................................................25100.2020200000000
..................................................................TTAG---AGACAA-AGTAGAAAGTAA.........................................................................................................................................................................................................................22100.2020000000020
...................................................................TAG---AGACAA-AGTAGAAAGTAAA........................................................................................................................................................................................................................22100.2020000000020
...........................................................................................................................................TATTAACCAAAAGTTTATGTAAGC..................................................................................................................................................24100.2020200000000
.............................................................................................................................................................................TAGATTTGTAAAATCGCTTGGAT.................................................................................................................23100.2020100000010
.................CCTATTCACCATAAACGCACAAAG............................................................................................................................................................................................................................................................................2460.1710100000000
....TATTGCGAAAAATCCTATTCACC..........................................................................................................................................................................................................................................................................................2360.1710100000000
...............ATCCTATTCACCATAAACGCACAAAGCA..........................................................................................................................................................................................................................................................................2860.1710100000000
.......................................................................................................................AG--AAAAACGTTGCCGATGTAT.......................................................................................................................................................................2190.1110000000010
................................................................................................................TCCACACAG--AAAAACGTTGCCGATGT.........................................................................................................................................................................2690.1110100000000
................................................................................................................................................................................................................................................AAT--C-------AC--AAA-ATATTATG-CTTAAGA................................2490.1110100000000
.........................................................................AGACAA-AGTAGAAAGTAAAGAGATAAAA...............................................................................................................................................................................................................2890.1110000000010
...................................................................................................................................TGCCGATGTATTAACCAAAAGTTTAT........................................................................................................................................................2690.1110100000000
.........................................................................AGACAA-AGTAGAAAGTAAAGAGATAAAAC..............................................................................................................................................................................................................2990.1110000000010
.................................................................................................................CCACACAG--AAAAACGTTGCCGATG..........................................................................................................................................................................2490.1110100000000
.............................................................................AA-AGTAGAAAGTAAAGAGATAAAACT.............................................................................................................................................................................................................2690.1110100000000
...................................................................................................................................TGCCGATGTATTAACCAAAAG.............................................................................................................................................................2190.1110000000010
...................................................................TAG---AGACAA-AGTAGAAAGTAAAA.......................................................................................................................................................................................................................23100.1010000000010
..............................................................................................................................................................................AGATTTGTAAAATCGCTTGGATTAAT-............................................................................................................26100.1010000000010
.............................................................................................................................................................................TAGATTTGTAAAATCGCTTGG...................................................................................................................21100.1010000000010
.................................................................................................................................................................................TTTGTAAAATCGCTTGGATTAAT-TG..........................................................................................................25100.1010100000000
....................................................................AG---AGACAA-AGTAGAAAGTAAAA.......................................................................................................................................................................................................................22100.1010000000010
.......................................................................................................................................GATGTATTAACCAAAAGTTTATGT......................................................................................................................................................24100.1010100000000
.........................................................................................................................................TGTATTAACCAAAAGTTTATGTAAGC..................................................................................................................................................26100.1010010000000
.................................................................................................................................................................................TTTGTAAAATCGCTTGGATTAAT-TGA--TT-------..............................................................................................28100.1010000000010
......................................................................................................................................CGATGTATTAACCAAAAGTTTATG.......................................................................................................................................................24100.1010100000000
...........................................................CATTTTGTTAG---AGACAA-AGTAGA...............................................................................................................................................................................................................................23100.1010000000010
..........................................................TCATTTTGTTAG---AGACAA-AGTAGA...............................................................................................................................................................................................................................24100.1010000000010
................................................................TGTTAG---AGACAA-AGTAGAAAGTAA.........................................................................................................................................................................................................................24100.1010000000010
....................................................................AG---AGACAA-AGTAGAAAGTAAAG.......................................................................................................................................................................................................................22100.1010100000000
................................................................TGTTAG---AGACAA-AGTAGAAA.............................................................................................................................................................................................................................20100.1010000000010
.............................................................................................................................................................................TAGATTTGTAAAATCGCTTGGATTAAT-............................................................................................................27100.1010100000000
.................................................................GTTAG---AGACAA-AGTAGAAAGTAAAGAG.....................................................................................................................................................................................................................27100.1010000000010
............................TAAACGCACAAAGCATATAGATTTAAAA.............................................................................................................................................................................................................................................................28100.1010000000010
........................................................TATCATTTTGTTAG---AGACAA-AGTAGA...............................................................................................................................................................................................................................26100.1010000000010
..........................................................................GACAA-AGTAGAAAGTAAAGAGA....................................................................................................................................................................................................................22100.1010100000000
...........................................................................................................................................................................TATAGATTTGTAAAATCGCTTGGAA.................................................................................................................25100.1010100000000
......................................................................................................................................CGATGTATTAACCAAAAGTTTATGT......................................................................................................................................................25100.1010000001000
............................................................ATTTTGTTAG---AGACAA-AGTA.................................................................................................................................................................................................................................20100.1010100000000
................................................................TGTTAG---AGACAA-AGTAGAAAGTAAAA.......................................................................................................................................................................................................................26100.1010000000010
..............................................................................................................................................................................AGATTTGTAAAATCGCTTGGATA................................................................................................................23100.1010100000000
................................................................................................................................................................................................................................................................................TAAGCAAAAGTGTTGAAAT---------------TTG22100.1010000001000
.................................................TTTAAAATATCATTTTGTTAG---AGACAA-AG...................................................................................................................................................................................................................................29100.1010100000000
...........................................................................................................................................................................TATAGATTTGTAAAATCGCTTGGATA................................................................................................................26100.1010000000010
................................................................TGTTAG---AGACAA-AGTAGAAAGTAAAGAG.....................................................................................................................................................................................................................28100.1010000000010
...........................................................................................................................................TATTAACCAAAAGTTTATGTAAGCAA................................................................................................................................................26100.1010100000000
......................TCACCATAAACGCACAAAGCATATAGAT...................................................................................................................................................................................................................................................................28100.1010100000000
............................................................................................................................................................................ATAGATTTGTAAAATCGCTTGGAT.................................................................................................................24100.1010100000000
...................................................TAAAATATCATTTTGTTAG---AGACAA-AG...................................................................................................................................................................................................................................27100.1010000000010
..............................................................................................................................................................................AGATTTGTAAAATCGCTTGGATTAA..............................................................................................................25100.1010100000000
droPer2
AAGAGCTGGCTAGGAACCCAGTTCATCACTCAAGGACCAAGCATATTGATATAAGATATCACTTTGTACG---ACAGAT-TGTAGAAGAAGGTCAAGTTAAGTTAAAATATGCTAGTACAACAGATATGATTGCAGATATCTTGACCAAGAGTCTCCGTAAGAGAAAGCATGTCGAATTTACAAAATTGTTAAGTTTAAATTGA--GT-------TAAAT--G----------GA--------------ATTG-GTAAGCATGC--ACGCATTGAGGAAGGGTGTTGAAGA---------------ATGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................ATGATTGCAGATATCTTGACCAAGAGT............................................................................................................................................................2711.001010000
..................................................................TACG---ACAGAT-TGTAGAAGAAGGTC.......................................................................................................................................................................................................................24140.294400000
.......................CATCACTCAAGGACCAAGC...........................................................................................................................................................................................................................................................................19120.253300000
.................................................................................................................TAGTACAACAGATATGATTGCAGA............................................................................................................................................................................24110.091010000
............................................................................GAT-TGTAGAAGAAGGTCAAGTTA.................................................................................................................................................................................................................23110.091010000
droAna3
AATGTTTAGCCAAAAATCCAAAGTTCCATGCGAGAAGCAAACACATTGATATTAAGTATCATCATGTCAG---GGATAT-GTATAAAAGTAAAATTATAAATATTGAATATGTATCTACTGAGAATATGATTGCTGATGTATTAACAAAGAATTTGAATAGAGTAAAACATGAGAAATGTATTAGTCTACTAGGACTTTTGTAA-----------------------------------------T--------GAAGAC-ATA--ATGCGTTGAGAAGGAGTGTTGGAAT----TAAAAATTTATACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................GCGTTGAGAAGGAGTGTTGGAAT----TA............25160.061100000
..................CAAAGTTCCATGCGAGAAGCAAA............................................................................................................................................................................................................................................................................23180.061100000
.........................................................................................................................................................................ATGAGAAATGTATTAGTCTACTAGGAC.................................................................................................................27180.061010000
............AAAATCCAAAGTTCCATGCGAGAAG................................................................................................................................................................................................................................................................................25180.061010000
...........................................................................................................................................................................GAGAAATGTATTAGTCTACTAGGAC.................................................................................................................25190.051100000
.....................................................................................................................................................................................................................................................T--------GAAGAC-ATA--ATGCGTTGAGAAG..............................23190.051000010
..............................................................................................................TGTATCTACTGAGAATATGATTGC...............................................................................................................................................................................24200.051001000
...............................................................................................................................TGATTGCTGATGTATTAACAAAGAAT............................................................................................................................................................26200.051001000
.......................................................................................................................TGAGAATATGATTGCTGATGTATT......................................................................................................................................................................24200.051010000
...................................................................................................................CTACTGAGAATATGATTGCTGATGT.........................................................................................................................................................................25200.051100000
.................................................TATTAAGTATCATCATGTCAG---GGA.........................................................................................................................................................................................................................................24200.051010000
...................................................................................................AATATTGAATATGTATCTACTGAGAATA......................................................................................................................................................................................28200.051100000
..................................................................................................................TCTACTGAGAATATGATTGCTGATG..........................................................................................................................................................................25200.051100000
................................................................................................................TATCTACTGAGAATATGATTGCT..............................................................................................................................................................................23200.051010000
droBip1
AATGTTTAGCGAAGAATGCGAGTTTTCATGCTAGAAGTAAACATATAGATATCAAGTATCATTTCATAAG---AGATTT-ATATAAGAAGAAAGTTATTGATATTGAATATGTTCCAACCGAAAATATGATTTCAGATGTTCTAACTAAAGCTCTATGTAAAGTTAAGCACACAAAATGTATTACTTCACTAGGGTTAAACTAA--AA-------AGTAT--C----------TTT--TT---ATT----------AGAT-ATA--CCGCGGTGAGAAGGAGTGTTGAAAA----TA------TTTGTASizeHit CountTotal NormTotal
No Reads
droKik1
AGTGCCTAGTTAAGAATCCTGTATATCACGCGCGCAGCAAACATATAGACATTAAGTATCATCATGTAAG---AGATAT-GTTTAAAGAAAAAGTCATAGATTTGAGATATGTATCAACAGAGAACATGATGGCAGATGTGTTAACTAAGAATTTGAGCAAAGTTAAGCACTTGAAATGTATAAATATGATGGGTTTTCTGTAA--AT-------TATGTACTTTAGT--TATCCTGTAAA----A-------T---GAC-AAA--CAGCGTTGAGAAGGAGTGTTAGAAA----TATAGA--AGTATASizeHit CountTotal NormTotal
No Reads
droFic1
AGTGCCTAGTAAAAAATCCTGTATATCATGCGCGCAGCAAACATATAGATATTAGATACCATCATGTAAG---AGATAT-ATTTAAGGAAAAGATTATAGATTTGAAGTATGTATCAACAGAAAACATGATGGCAGATGTGTTAACGAAGAATTTAAGTAAGCTTAAGCACATGAATTGTATTAATATGATGGGTTTGCTGTAA--AT-------AA----------T--TATCTT--GT---AAA---------------TGA--CAGCGTTGAAAAGGAGTGTTAGAAA----TA--------TAGASizeHit CountTotal NormTotal
No Reads
droEle1
ATCAGCTAGCAAAAAATCCGGTGCATCATGCAAAGACGAAGCATGTAGATATAGGATACCACTTTGTACT---TCAGAT-ATTAAGTGAAGGTCAGATTGTTTTGAAATATGAGGCAATG--AGGCATGATTGCAGATGTTTTGACTAAGAATTTGGCAAATAAGAAACACCATTAATTTGTAAAATGGTTGAATCTGTACTAG------------------------------------------------------CA-ATA--TTGCATTGAGGAGGAATGTTAAAAA----TG-----------TSizeHit CountTotal NormTotal
No Reads
droRho1
AGTATCTTGTAAAGAATTCTGTATATCACGCGCGCAGCAAACATATAGATATTAACTATCATCATGGAAG---AGATAT-GTTTAAAGAAAAGATTATAGATTTAAAATATGTATCAACAGAAAACATGATGGCAGATGTGTTAACAAAGAATCTAAGTAAGATTAAGCACATGAAATGTATTAATATGATGGGGTTGCTGTAA--AT-------AATGTATTTTAAT--TATCCTGTAAA----A-------T---GAC-AAA--CAGCGTTGAGAAGGAGTGTTAGGAA----TA--------TGTASizeHit CountTotal NormTotal
No Reads
droBia1
AACAATTGTCAAAGAATCCAGTACATCATTCAAGATCAAAACACATAGATAT-------ATCTTTGTAAG---AGATAT-AGTTAAGGAAGGGCAGATTATTTTGAAGTATTTTTCAACTAAACAGATGATTGCAGATATATTAACAAAGAACCTTCAGAAACAAAAACATTGTGAGCTTACTAAAAAGTTAAGTTTGTATTAA--AA-------TA--------------------TAAA----A-------T---GAG-AGA--TGACATTGAAGAAGAGTATCGAAA-------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AACATCTCGTCAAGAATGCAACATTCCATGCAAGAAGCAAGCACATCGATATCAAATATCACCACGTTAG---GGAAAT-GTATAAAGAAAATGTTATTGAAATAGAATATGTTCCCACAGAGAAAATGATATCTGATGTACTAACCGAAAATTTGGCTAAAGTTAAGCACGAAAAATGTATTGAACTAATGGGATTATGCTAA--AT-------TAA----TT---TTGAAATT--TGTAAT--G--------CCAGAC-ATA--GTGCTTTGAGAAGGAGTGTTGAATA----TG------TATAATSizeHit CountTotal NormTotal
No Reads
droEug1
AATGTTTAGCTAAGAATCCGATTTTGCATAAACGTAGTAAACATATTGATATTAAGTTTCATCATGTACG---AGAGTT-ATATACTAAAAATGAAATAGATGTTAAGTATATAAGTACTAATGATATGGTCTCAGATGTATTAACTAAAAACTTGCAAAAGAACAAACATGTAAAATGTATTAATGAAATGAATTGTTATTAA--TA-------TG--------------------TATA----A-------A---GTA-TAT--GATTGTTGAGAAGGAGTGTTGAAAT---------------ATGSizeHit CountTotal NormTotal
No Reads
dm3
AGTGCTTGGTGAAAAATGAAACTTTCCATGCACGTAGTAAGCATATAGATATAAAATATCATTATATAAG---AGAACT-GCATAAGAACAATATAATAGAAGTTAATTATGTACCCACAGAAAACATGATGGCAGATGTTCTAACCAAGAATTTGAATAGATTTAAACATGAAAAGTGTATCCAAGGGATGGGTTTAAACTAAAAAA-------AATGTATTTTGA--------------------------------------------TTTTGGAATTAAGAT----------A------AAAATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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droSim2
AATGCTTAGTTAAGAATCCTAGGTTCCATGCAAGAAGCAAACACATTGACATTAAATATCATTATGTCAG---AGATAT-ATATAAGGATAAAATTGTAAACATTAATTATGTTCCCACTGAAGACGTG------TATGTGTTAACAAAGAATTTAAGTTGAATTAAGCATAATTAATGTATTAAGCTAATGAGACTGTTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTTGAGAAGGAGTGTTGAGTA----TA------TATA-ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
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...........................................................................................................................................................................................TAATGAGACTGTTTTGA--GT-------GA--------------------------------ATAT-GTA....................................................2811.00100000000100000000
............................................................................TAT-ATATAAGGATAAAATT.....................................................................................................................................................................................................................1921.00200000000110000000
........................................................................................................................................................TTTAAGTTGAATTAAGCATAATTAATG..................................................................................................................................2711.00100000000000010000
.........................................................................................................................................................................................................TGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAA........................................2350.80400000010200010000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAA........................................2650.80400000003010000000
............................................................................................................................................................................................................................................................T-GTAAAC-ATA--CAACGTT....................................1740.75300000000003000000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--...........................................2350.60300000002010000000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-AT..............................................2250.60300000002010000000
............................................................................................................................................................................................................................................................T-GTAAAC-ATA--CAACGTTGAGAAGGAG...........................2640.50200000000110000000
...............................................................................................................................................................................................................T-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTTGAGA................................2740.50200000002000000000
...............................................................................................................................................................................................................T-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTTGAG.................................2640.50200000020000000000
....................................................................AG---AGATAT-ATATAAGGATAAAATTG....................................................................................................................................................................................................................2520.50100000001000000000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTT....................................3040.50200000002000000000
........................................................................................................................................................................................................TTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGT.....................................2740.50200000000000020000
........................TCCATGCAAGAAGCAAACACATTG.....................................................................................................................................................................................................................................................................2450.40200000000101000000
............................TGCAAGAAGCAAACACATTG.....................................................................................................................................................................................................................................................................2050.40200000000002000000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CT.........................................2550.40200000002000000000
......................................................................................................................................................................................................................................................................TA--CAACGTTGAGAAGGAGTG.........................2030.33100000000001000000
......................................................................................................................................................................................................................................................................TA--CAACGTTGAGAAGGAGTGTTG......................2330.33100000000001000000
........................................................................................................................................................................................................TTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTT....................................2840.25100000000000010000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACG......................................2840.25100000001000000000
............................................................................................................................................................................................................................................................T-GTAAAC-ATA--CAACGTTGAGAAGGA............................2540.25100000001000000000
..........................................................................................................................................................................................................................................................TAT-GTAAAC-ATA--CAACGTTGAGAAGG.............................2640.25100000010000000000
.........................................................................................................................................................................................................TGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTTA...................................2840.25100000000000010000
.........................................................................................................................................................................................................TGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGA.....................................2640.25100000000000010000
...................................................................................................................................................................................................................................................................C-ATA--CAACGTTGAGAAGGAGG..........................2140.25110000000000000000
.........................................................................................................................................................................................................TGA--GT-------GA--------------------------------ATAT-GTAAAC-AT..............................................1950.20100000010000000000
...............................AAGAAGCAAACACATTG.....................................................................................................................................................................................................................................................................1750.20100000000001000000
...........................................................................................................................................................................................................................................................................AACGTTGAGAAGGAG...........................1550.20100000001000000000
..........................................................................................................................................................................................................GA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--...........................................1950.20100000000001000000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--C..........................................2450.20100000000010000000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAAC.......................................2750.20100000001000000000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-................................................2050.20100000000010000000
......................GTTCCATGCAAGAAGCAAAC...........................................................................................................................................................................................................................................................................2050.20100000000001000000
.........................................................................................................................................................................................................TGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACAA.....................................2650.20100000000000010000
................................AGAAGCAAACACATTG.....................................................................................................................................................................................................................................................................1650.20100000000001000000
droSec2
AATGCTTAGTTAAAAATCCTAGGTTCCATGCAAGAAGCAAACACATTGATATTAAGTATCATCATGTAAG---AGATAT-ATATAAGGATAAAATTGTAAGCATTAGTTATGTTCCCACTGAAGACATGATAGCGGATGTGTTAACAAAGAACTTAAGTAGAATTAAGCATAATAGATGTATTAAGCTAATGGGAATGTTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAACGTTGAGAAGGAGTGTTGAATA----TA--------TA-ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................CATGCAAGAAGCAAACACATTGATA..................................................................................................................................................................................................................................................................2511.0011000
..........................................................................................................................................GTGTTAACAAAGAACTTAAGTAGAAT.................................................................................................................................................26200.601212000
..........................................................................................................................................GTGTTAACAAAGAACTTAAGTAGAA..................................................................................................................................................25200.2555000
..............................................................................................................................................................................AGATGTATTAAGCTAATGGGA..................................................................................................................21200.2550500
....................................................................................AAGGATAAAATTGTAAGCATTAGT.........................................................................................................................................................................................................24200.2044000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--C..........................................24200.2044000
..........................................................................................................................................GTGTTAACAAAGAACTTAAGTAGAATT................................................................................................................................................27200.1533000
...................................................TTAAGTATCATCATGTAAG---AGATA.......................................................................................................................................................................................................................................24200.1531020
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CA.........................................25200.1022000
....................................................................................AAGGATAAAATTGTAAGCATTAGTTA.......................................................................................................................................................................................................26200.1022000
..............................................................................................................TGTTCCCACTGAAGACATGATAGCG..............................................................................................................................................................................25200.1022000
...........................................................................................................................................TGTTAACAAAGAACTTAAGTAGAA..................................................................................................................................................24200.1022000
....................................................................................AAGGATAAAATTGTAAGCATTAGTT........................................................................................................................................................................................................25200.1022000
..........................................................................................................................................................................................................................................................................CAACGTTGAGAAGGAGTGTTGAATA----TA--------T...28150.0711000
.................................................................................................................TCCCACTGAAGACATGATAGCGGATA..........................................................................................................................................................................26200.0510010
..........................................................................................................................................................................TAATAGATGTATTAAGCTAATGGGAATA...............................................................................................................28200.0511000
...................................................................................................AGCATTAGTTATGTTCCCACTGAAGA........................................................................................................................................................................................26200.0511000
...................................................................................TAAGGATAAAATTGTAAGCATTAGT.........................................................................................................................................................................................................25200.0511000
.....................................................................................................CATTAGTTATGTTCCCACTGAAGACATG....................................................................................................................................................................................28200.0510100
............................................................................................................................ACATGATAGCGGATGTGTTAAC...................................................................................................................................................................22200.0510100
.........................................................................................................................AAGACATGATAGCGGATGTGT.......................................................................................................................................................................21200.0510001
.................................................................................................................................ATAGCGGATGTGTTAACAAAG...............................................................................................................................................................21200.0510100
..................CTAGGTTCCATGCAAGAAGCAAACACAA.......................................................................................................................................................................................................................................................................28200.0511000
................................................................................ATATAAGGATAAAATTGTAAGCAT.............................................................................................................................................................................................................24200.0511000
..................................................................................................................................................................................GTATTAAGCTAATGGGAATGTTT............................................................................................................23200.0510100
............................................................................................................TATGTTCCCACTGAAGACATGATAGC...............................................................................................................................................................................26200.0511000
..........................................................................................................................................GTGTTAACAAAGAACTTAAGT......................................................................................................................................................21200.0511000
.................................................................................................................................................CAAAGAACTTAAGTAGAATTAAGC............................................................................................................................................24200.0511000
................................................................................................................................................ACAAAGAACTTAAGTAGAATT................................................................................................................................................21200.0510100
..........................................................................................................................AGACATGATAGCGGATGTGT.......................................................................................................................................................................20200.0511000
...................TAGGTTCCATGCAAGAAGCAAACACA........................................................................................................................................................................................................................................................................26200.0510010
..................................................ATTAAGTATCATCATGTAAG---A...........................................................................................................................................................................................................................................21200.0510100
............................................................................................................................................................................ATAGATGTATTAAGCTAATGGGAAT................................................................................................................25200.0510100
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAA........................................26200.0510001
...................................................TTAAGTATCATCATGTAAG---AGATAT-A....................................................................................................................................................................................................................................26200.0510010
.......................................................................................................TTAGTTATGTTCCCACTGAAGA........................................................................................................................................................................................22200.0511000
....................................................................................................................................................................................ATTAAGCTAATGGGAATGTTTTGA--GT-------..............................................................................................26200.0510100
.......................TTCCATGCAAGAAGCAAACACATT......................................................................................................................................................................................................................................................................24200.0510010
............................................................................................................................ACATGATAGCGGATGTGTT......................................................................................................................................................................19200.0511000
..........................................................................................................................................GTGTTAACAAAGAACTTAAGTAGAATTA...............................................................................................................................................28200.0511000
.............................................................................................................................................................................................ATGGGAATGTTTTGA--GT-------GA--------------------------------............................................................19200.0510100
.........................................................................................................................................................................ATAATAGATGTATTAAGCTAATGGGA..................................................................................................................26200.0510010
...................................................................................................................................................................................................ATGTTTTGA--GT-------GA--------------------------------ATAT-GTA....................................................20200.0510100
................................................................................................................TTCCCACTGAAGACATGATAGCGGA............................................................................................................................................................................25200.0511000
.........TTAAAAATCCTAGGTTCCATGCAAGA..................................................................................................................................................................................................................................................................................26200.0511000
......................................................................................................................................................................................................TTTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAAC.......................................27200.0511000
.................................................................................................................TCCCACTGAAGACATGATAGCGGA............................................................................................................................................................................24200.0510010
........................................................................................................TAGTTATGTTCCCACTGAAGACATGA...................................................................................................................................................................................26200.0511000
.....TTAGTTAAAAATCCTAGGTTCCATGCA.....................................................................................................................................................................................................................................................................................27200.0510010
..................................................................................................................................................................................GTATTAAGCTAATGGGAATGT..............................................................................................................21200.0510100
...........................................................................................................................................TGTTAACAAAGAACTTAAGTAGAAT.................................................................................................................................................25200.0511000
................................................................................................................................GATAGCGGATGTGTTAACAA.................................................................................................................................................................20200.0510100
.........................................................................................................................................TGTGTTAACAAAGAACTTAAGTAGAAT.................................................................................................................................................27200.0511000
....................................................TAAGTATCATCATGTAAG---AGATAT-A....................................................................................................................................................................................................................................25200.0510010
..................................................ATTAAGTATCATCATGTAAG---AGATA.......................................................................................................................................................................................................................................25200.0510010
.......................................................................................................................................................................................................TTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--...........................................22200.0511000
...............................................................................................................................................AACAAAGAACTTAAGTAGAATT................................................................................................................................................22200.0510100
.......................................................................................................................................................................................................TTTGA--GT-------GA--------------------------------ATAT-GTAAAC-ATA--CAA........................................25200.0511000
...................................................................................................AGCATTAGTTATGTTCCCACTGAAGACA......................................................................................................................................................................................28200.0511000
..............................................................................................................................ATGATAGCGGATGTGTTAACA..................................................................................................................................................................21200.0511000
droYak3
AATGTTTAGTAAAAAATGGCACTTTCCATTCACGTAGTAAACATATTAATATTAAATATCATGATATATG---ACAAATTGTATAAGGAAAAGATAATTGAAATTAACTATGTTTCAACAGAAAACATGATATCAGATTTATTAACAAAGAATTTGAATCGAGTTAAGCATGAGAAATGTATTAAAATGATATGATTGTATTGA--------------------------------------------------------------TTGCGTTGACAAGGAGTGTTGAATT----TC--------TATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AGCAGTTGGCAAAGAATCCTGTACATCATTCAAGGTCAAAACATATGGACATCAGGTATCTCTTACAAAGTGAAGGAAG-GGTTAAGGAAGGGCAGATTATTTTAAAGTATCTTTCAACTAAACAAATGATTGCAGATATATTAACGAAGAACCTTCAGAAACAAAAGCATTGTGAGCTTACGAAGAAGTTAAGTTTATACTAA--AA-------TA--------------------TAAT----A-------T---GAG-AGC--ATACATTGAGAAAAAGTGTTGAAA-------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:29 PM