ID:

dwi_2639

 Coordinate:

scf2_1100000004908:51857-52007 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.1 -18.7 -18.7

Flybase annnotation

CDS [Dwil\GK18732-cds]; exon [dwil_GLEANR_1936:5]; intron [Dwil\GK18732-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. scf2_1100000011663:827-852 +
  2. scf2_1100000004590:218-243 +
  3. scf2_1100000004762:5590828-5590853 +
  4. scf2_1100000004816:56906-56931 +
  5. scf2_1100000004816:59245-59270 +
  6. scf2_1100000004884:167137-167162 +
  7. scf2_1100000004943:5735958-5735983 +
  8. dwi_2639  scf2_1100000004908:51862-51887 +
  9. scf2_1100000004930:159179-159204 -
  10. scf2_1100000004949:774724-774749 +
  11. scf2_1100000004949:847309-847334 -
  12. scf2_1100000004949:1135712-1135737 +
  13. scf2_1100000004949:1821445-1821470 +
  14. scf2_1100000004954:515647-515672 +
  15. scf2_1100000004961:352793-352818 -
  16. scf2_1100000004961:3849156-3849181 +
  17. scf2_1100000004963:413820-413845 +
  18. scf2_1100000004967:4079734-4079759 -
  19. scf2_1100000004967:4082553-4082578 -
  20. scf2_1100000000346:4102-4127 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TAGGTAAGGAAAGAGTTACCAAAAATATTGCAAGGGTATACAAACTTTGACGCGGTCGAAGTTAGCCCCGACCCTCTGGTTTTGTATTAAACAAGGAATAAAAAATCAAAAAGAGATGTTAATTAAAAAGAATTCAGAAAAGTTTTAGAATAATATTTAATTATTAATTAATATTTTGTTAAAAAATTGTTTTGTTTACAGCGTTATCGTGATGACTTTTTGGAAGACTACGAGACAATTGGGTATAAGCA
**************************************************...(((((..........)))))((((((((((.((((........)))).))))))....))))...................(((((.((((((..(((((...((((((...))))))....)))))..)))))).))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 V118
embryo
 M020
head
 V119
head
.......................................................................................................................................................................................................................CTTTTTGGGAGACGACGAGACT.............. 22 3 4 0.25 1 0 1 0 0 0
....................................................................................................................................................................................................AACAGCGGTACCGTGATGA.................................... 19 3 6 0.17 1 1 0 0 0 0
......................................TACAAACTTTGACGCGGTCGAAG.............................................................................................................................................................................................. 23 0 20 0.15 3 3 0 0 0 0
....................................TATACAAACTTTGACGCGGTCGAAG.............................................................................................................................................................................................. 25 0 20 0.10 2 0 2 0 0 0
.....................................ATACAAACTTTGACGCGGTCGAAGT............................................................................................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0
...............................................TGACGCGGTCGAAGTTAGCCCCGAC................................................................................................................................................................................... 25 0 20 0.10 2 0 0 2 0 0
..............................................TTGACGCGGTCGAAGTTAGCCCCGA.................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
...............................................TGACGCGGTCGAAGTTAGCCCCGA.................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.......................................................TCGAAGTTAGCCCCGACCCTCTGGTT.......................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0
...............................................TGACGCGGTCGAAGTTAGCCCCGACCCTC............................................................................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0
..........................ATTGCAAGGGTATACAAACT............................................................................................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 1
...............................................TGACGCGGTCGAAGTTAGCCCC...................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0
......................................................GTCGAAGTTAGCCCCGACCCTCTGGTTT......................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0
......................................................GTCGAAGTTAGCCCCGACCCTCTGGTT.......................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0
.............................................................TTAGCCCCGACCCTCTGGTTT......................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0
........................................................CGAAGTTAGCCCCGACGCTCTGG............................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0
........................................................CGAAGTTAGCCCCGACCCTCT.............................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0 0
....TAAGGAAAGAGTTACCAAAA................................................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

ATCCATTCCTTTCTCAATGGTTTTTATAACGTTCCCATATGTTTGAAACTGCGCCAGCTTCAATCGGGGCTGGGAGACCAAAACATAATTTGTTCCTTATTTTTTAGTTTTTCTCTACAATTAATTTTTCTTAAGTCTTTTCAAAATCTTATTATAAATTAATAATTAATTATAAAACAATTTTTTAACAAAACAAATGTCGCAATAGCACTACTGAAAAACCTTCTGATGCTCTGTTAACCCATATTCGT
**************************************************...(((((..........)))))((((((((((.((((........)))).))))))....))))...................(((((.((((((..(((((...((((((...))))))....)))))..)))))).))))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M020
head
 M045
female body
 V118
embryo
.................................................................................................................................................................................................CAAATGTCGCAATATCATT....................................... 19 2 3 0.67 2 2 0 0
......................................................................................................................................................................................................GTCGCCATGGCACTACTAAA................................. 20 3 3 0.33 1 0 1 0
.............................CGTTCCCATATGTTTGAAACTGCGC..................................................................................................................................................................................................... 25 0 20 0.10 2 0 0 2

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004908:51807-52057 + dwi_2639 TAGGTAAGGAAAGAGTT--A--------------------CCAAAAAT----------ATTGCAAGGGTATACAAACTTTGACGCG-GTCGAAGTTAGCCC-CGACCCTCTGGTTTTGTATTAAACAAGG---------------------------------------------------------------------------------------------------AA--------------------------------------------------TAAAAAATCAAAAAGAGA-------------TG----------------------TT-A--------------ATTAAAAAGAATTCAGAAAAGTTTTAG------------AATAATATTTAATTATTA----------ATTAATATT---------------------------------------------------------------------------------------------------------------------TTGTTAAAAAATTGTTTTGTTTACAGCGTTATCGTGAT------GA--CTTTTTGGAAGACTACGAGACAATTGGGTATAAGCA------------
droVir3 scaffold_13049:24736947-24737189 - GAGGCAAAGCA----CTATGAGCATTATGAAA--------AGGTTGGG----------TCTGCAAGGGTATTAGATCTTTGGCGT--GCCGAAGATAGCCCTT--CTTTCTCGTCAGTTTTT------AG------------TTTTAAGTACTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAACAAT---------------------------------------GTACTAACGACTAAGTTATGTCAAAATTTAAAATT-CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGAAA-AAAATGTTCATTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAGTC--------------A------------
droMoj3 scaffold_6540:19985434-19985583 + TAGGGAAGGAA----ACCA------------------------AACAT----------GTTACAG----------------------------------------------------------------------------------AAATTTTGA------------------------------------------AAAATATATTGGATCTGTTTTTATACCCAACAATAAAAA----AAA----------------------------AAAAAAAAATATAAAATAAAATAAATA-------------AT----------------------TA-AT--A------------------------------------------------------------------------------ATA-------------TAAAAGTAAATATTAAATAA------------------------TATAT-------------------------------------------------------------AATAA-----------------------------------------------------------------------ATA----A---A-------
droGri2 scaffold_15110:22911633-22911711 + ATAACAACTGG----AAGA-----------------G------------------AAA--T------------------------------------------------------------------------------------------AAT------------------GAGAATATAAATTTTAG-------------------------------------------------------------------------------------------------------ACAA--A-------------TT----------------------TTC----------------------------------------------------------------TCTTATTA----------ACAAATATATT---------------------------------------------------------------------------------------------------------------------TTTG----------------------------------------------------------------------AAAA----A---T-------
dp5 XR_group3a:1100232-1100380 - TTGGAATTCAA----CAA----------------------CAACAACA----------ACAA--------CAATAACAACGATGA--GATGAAGAT------------------------------------------------------------------------------------------TAA-------------------------------------------------------------------------------------------------------ATAG--A-------------AT----------------------CC-TC--CCTC------------------------------GCGG----------------------TATCCTG--------------------CATGTAC-AAAAAGTTTATCCTTATTTA------------------------TAAAA------------GAATGT-------------TGAAT-------------T----------TTGATACAAAATTGTTTTGTCTA--------------------------------------------------------C----G---G-------
droPer2 scaffold_8038:79-192 + TTACAGAAAAA----ATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATATATAGAAAATGTAAGAAATA-------------AT----------------------TA-TT--ATTC------------------------------TCAG----------------------AATTTTGTA----------TATA----------------------TATTTATTTA-------------------------------------------------------------------------------------TGTTTTGTTGTGACCCTTCTTTATATTCTGC--------------------------------------------------ATT----G---T-------
droAna3 scaffold_13417:4173061-4173326 + TATGACTGAAC------------GATCGGAAATGGCA---CAATCTTA----------ACTGCAAGGGTATATTTACTTCGGCTCCGTCCGAAGTTAGCTTTG--CTTTCTTGTTTTTTAATAAAAAATTATTACGGTACGTTTA---------------------------------------------------------------------------------TACCACATTAA----AAA----------------------------ACATGTATATTTAAAATACATTAAACA-------------AA------------TTTTTAAAAGT-TTTTATTTTGCAGGTTCCATTAAATTGTT-----------------------------------------------------------------------CAAAGGTAAATTGTTCAATG------------------------TAAAC------------AGCAGA-------------TGAAT-------------C----------TT------------------------------------------------------AAGCCCACACCACAACTTTGTAGA----A---G-------
droBip1 scf7180000395865:6888-7158 - TAA--------------------------------------------------------CTGCAAGGGTATATCAACTTCGGCTCCGCCCGAAGTTAGCTTTC--CTTTCTTGTTTTGTT-----------------------TATATGTACATAGTAAGGATGAATACTGCTAACAAAAAGAGATTAAATTAATCAATCAGTAA---------------------TTCCACACC--TACAAAACC--------------TTGGGCTATTTTAAAAAGACATACAATATGAAAAAAATA-------------TA----------------------TT-T-----------------------------------------TTATATAATTAT-------------------ATATAATTTTTT-AACAA------CAGGA-----CATCTTTGTTAC------------------------AAATT------------GA---------------AG---------------------ACAT-----AA-----------------------------------------------------------CTGGGTCAATAGTGTATAAACAG---C-------
droKik1 scf7180000302271:25458-25678 + TAGGTAAAATG----TAATG--------------------AAATAATA----------TCTGCAAGGGTATACAAACTTCGGCGT--GCCGAAGTTAGCTT-C--CTTTCTTGTTGCTTGTAAAATATGT------------ACTTTAAATTTAGG------------------------------------------TAAATA-------------------------------AACAGAAATATAAA-AAAGTCTAACAAAACACATACATA------------------------TAAT----------------------------------A-TA----------------------------------------------------------------TCATCTA----------AAATAAAAT--------------------------------------------------------ATA---------------------------CCC-----------GTAGCCTT---------------------------------------AGCTTAAT------AA--ATAATTAAA---------------T-----AAA---GAAAATACAATT
droFic1 scf7180000453924:144986-145182 + TGGAAAATTAA----TAGA-----------------AAAATCTTCATA----------GCTGCAAGGGTATATAAGCTTCGGCTT--GCCGAAGCTAGCTT-C--CTTTCTTTTTTTTTT--AAA------------------------------------------------------------------------------------------------------CCCACTTG--AACAACCCC--------------AAAATCCATTTTAA------------------------TAATT-----------------------------------T----------------------------------------------------------------ACTTTTTA----------ATTTAACTT--------------------------------------------------------TTA---------------------------CTTTTTACTGATTGTTGTTTTTTGTTT-----TTT-----------------T----------------GCGT------TTT---TTT---------------T-----AAA---GA--TTACAA--
droEle1 scf7180000487466:61603-61838 + CAAAAGTATTT----AATTC--------------------TTGCAATA----------GCTGCAAGGGTATATGAACTTCGGCTT--GCCGAAGTTTGCTT-T--CTTTCTTGTTTTTTT-----------------------T--ATATACA--------------------------------------------------------------------------------------------------------------------------------TAATAAAACTAAAAAACA-------------TT----------------------TT-TT--TTTCTCAAAATACATAAAATTGTATAAATAA------------------------------------------------------------------------TAATTATTTTGGATTTTTTTGAATAGCGCTTA-TAATGATTA--CGGATG-----------AAAATATGATTT---------TTGAA------------------------------------------------------------------TTTTTACTTTATAAGTCCATT--GTATA----A---G-------
droRho1 scf7180000780183:27037-27231 - TAATTTACAGA---------------------------------GTAT----------TCTGCAAGGGTATATCAACTTCGGCTCCGCCCGAAGTTAGCTTTC--CTTTCTTGTTAAAATAT------AA------------TTTTTGAATTTTGG---------------------------------------------------------------------------------------------------------------------------------------AGAAATTA-------------TA----------------------TT-T-----------------------------------------ATATTTCTTTAT-------------------TTATTGTTTAATA---AG---------------------------------------------------------------TTG-TAAAATCATGA--------TTT-----------------------------------------------TTTGCAACTT-AATTTAAT------AA--ATCTTTTTAAA-------------T-----CAA---GGAA--TCGATT
droBia1 scf7180000302291:2529860-2530068 - CAAATTTAATA-----------------------------TGATGTTA----------CCAGCAAGGGTTTACAAACTCCGGCTT--GCCGAAATTAACTT-C--CTTTCTTGTTTTTAATTA------------------------------------------------------------------------------------------------------------TTTTAA----GAA----------------------------ATAAAAGT-------------------------------------------------------------------------------------------------------------------------------TAGCA-------TCAATA-------------ATTAAACGGTTA------GCATAGCTATC--TGGCGCTCTTTGAAGGTTAACCCGTTAACAGAGTGA-----------TG--------------------------------------------------------------GT--T------AA--CTTATTCTTTCATTACGAGTGAATTGTGTATAAGTA------------
droTak1 scf7180000412980:16623-16846 + TAGTCTAGTCAAGTTTTAAT--------------------TCGTAAAA----------TCTGCAAGGGTATTAAAACTTCGGCTT--GCCGAAGTTAGCTT-C--CGTCCTCGTTTTAAATCT--------------------G--ATTTGCA-----------------------------------------------------------------------------GCTTAAA-----------ATG---------------------AAATTTAACTCT-------------------------------------------------------------------------------------------------------------TAAATTTCCTAAATTTTCT-------TCAATA-------------ACTATAGAGATATCTCTTAG------------------------CAAGTA--AGGATG-----------A--------AACGTGTCTTGTTCGAAGCTGTAACTT-----TAT-----------------T----------------GTGTTG-T--TTT---------------------T-----TTG---GA--A-------
droEug1 scf7180000407817:3603-3751 - CTGCTTTCCAATAA-AACA------------------------ACCATGTATAAGCAA--T------------------------------------------------------------------------------------------ACA------------------GAAACAATTA----------------ATTTTAAGTCGGAAACGTTTGTGAACC-----------------------------------AAATACTAAATTAA------------------------AATAT-----------------------------------T----------------------------------------------------------------ATTAATTA----------ATTAAAATATT--------------------------------------------------------A---------------------------TTTAAAATTTATTTT------------TATTTTATTA---------------------------------------T--TAT---------------------T-----TTG---A---T-------
dm3 chr2L:10196036-10196089 - ACAGTGCTATC----ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------GA--CTATTTGGATGACTATGGCAAAATAGGCTACAAACA------------
droSim2 2l:9873608-9873661 - ACAGTGCTATC----ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------GA--CTATTTGGATGACTATGGCAAAATAGGCTACAAGCA------------
droSec2 scaffold_54:158173-158335 - GTATGGTGTTA----AAA---GTAATAAGAAA-----------------------------------------------------------------------------------------------------------------------------------------------TGAATTT----------------TCTGTAA--------------------------TTTTAA-----------AAG---------------------AAAT------ATAATA--------------GTTCTTAAAACCTAATATTGTCTTTGTCAATAATT-CT--------------------GTTTCTACGATTAA--------------------------------------T-------TATTA---TT---------------------------------------------------------------------------------------------------------------------TTGTTAGGTAAGTTTTCCTTTAACAACCTGTTTCTTA--------TATCTT----------------------------T----T---T-------
droYak3 2R:1467216-1467336 + TATTAAAATTT----AAG---A------------------ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAATCAAAAAGGGC-------------TC----------------------TT-T--------------ATTTATAACTATTTAAAAGA------------------------------------------------------------------------TATTTTTCTTGG------------------------AAAAT------------GAGTAATAA--------TTCCTAGCATATTAATTTTTATAGATT-----TAT-----------------C----------------G---------------------------------------------C---G-------
droEre2 scaffold_4784:15666170-15666238 + AAAGAAAAACA----TTAA---T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGAAACCCACATACGTTACAT------------TAAATCTTATAATTTTTAA----------TAAA----------------------TATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TAGGTAAGGAAAGAGTT--A--------------------CCAAAAAT----------ATTGCAAGGGTATACAAACTTTGACGCG-GTCGAAGTTAGCCC-CGACCCTCTGGTTTTGTATTAAACAAGG---------------------------------------------------------------------------------------------------AA--------------------------------------------------TAAAAAATCAAAAAGAGA-------------TG----------------------TT-A--------------ATTAAAAAGAATTCAGAAAAGTTTTAG------------AATAATATTTAATTATTA----------ATTAATATT---------------------------------------------------------------------------------------------------------------------TTGTTAAAAAATTGTTTTGTTTACAGCGTTATCGTGAT------GA--CTTTTTGGAAGACTACGAGACAATTGGGTATAAGCA------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................TACAAACTTTGACGCG-GTCGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15303000
....................................................................TATACAAACTTTGACGCG-GTCGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200200
.....................................................................ATACAAACTTTGACGCG-GTCGAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
...............................................................................TGACGCG-GTCGAAGTTAGCCC-CGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200020
..............................................................................TTGACGCG-GTCGAAGTTAGCCC-CGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...............................................................................TGACGCG-GTCGAAGTTAGCCC-CGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................TCGAAGTTAGCCC-CGACCCTCTGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
...............................................................................TGACGCG-GTCGAAGTTAGCCC-CGACCCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
..........................................................ATTGCAAGGGTATACAAACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
...............................................................................TGACGCG-GTCGAAGTTAGCCC-C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.......................................................................................GTCGAAGTTAGCCC-CGACCCTCTGGTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.......................................................................................GTCGAAGTTAGCCC-CGACCCTCTGGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..............................................................................................TTAGCCC-CGACCCTCTGGTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000
.........................................................................................CGAAGTTAGCCC-CGACCCTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
....TAAGGAAAGAGTT--A--------------------CCAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
droVir3
GAGGCAAAGCA----CTATGAGCATTATGAAA--------AGGTTGGG----------TCTGCAAGGGTATTAGATCTTTGGCGT--GCCGAAGATAGCCCTT--CTTTCTCGTCAGTTTTT------AG------------TTTTAAGTACTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAACAAT---------------------------------------GTACTAACGACTAAGTTATGTCAAAATTTAAAATT-CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGAAA-AAAATGTTCATTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAGTC--------------A------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGT......................................................................................................................................................................................................251460.43846108149203804101380000009009559168104342793155543324811681100000000000000000000020
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTTCA...................................................................................................................................................................................................281316.772180060101000000000000000001031272734121112110174603300000000000000000000020
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTT.....................................................................................................................................................................................................261416.64233113262100812068000000000183020331041660144822221110011110001000003010
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATG.......................................................................................................................................................................................................241411.7916560406311221013130000004003031081773883835211610000000000000000300000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTTC....................................................................................................................................................................................................27136.23810061230200000000000001001043924158044341200000000101000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................T---T-------TACCAGTTCGTTTGAAA-AAAATGT......................................................................................................................................................................................................26145.71800000131000000000000001007147802037148731200000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAACA..............................................................................................................................................................................................................................................................................................................................................................................................28124.4253000000000000100000000000287643162082120000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TAACGACTAAGTTATGTCAAAATTT........................................................................................................................................................................................................................................................................................................................25123.6744000001000000000000000000057986131011100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAAACAAG.............................2393.00270010000300000100000000000100214000200000300000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAG.............................2693.0027003000000000000000000000072022000091010000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAACAA.............................................................................................................................................................................................................................................................................................................................................................................................29122.92350000000000000000000000000061032003055100000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAAC...............................................................................................................................................................................................................................................................................................................................................................................................27122.8334000000000000000000000000347440020027100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAAT........................................................................................................................................................................................................23152.4737002020500000000000000001212740133000201100000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGTTCGTTTGAAA-AAAATGT......................................................................................................................................................................................................24142.3633001002300000000000000000043210010090412000000000000000000000000
...............................................................................................................................................................................................................................................................TTAACAAT---------------------------------------GTACTAACGACTAAGTTA...................................................................................................................................................................................................................................................................................................................................26142.14300030000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAG.............................2792.0018001000000001000000001000031033101021000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAAACAAGG............................2491.89170000000400000000000000000000013000000000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAA................................................................................................................................................................................................................................................................................................................................................................................................26121.8322000000000000000000000000034234010030010100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTC.....................................................................................................................................................................................................26141.1416000112000000100000000002010111100100000200000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGTTCGTTTGAAA-AAAATGTT.....................................................................................................................................................................................................25141.0014004000011000020000000000130010010000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTAACAAT---------------------------------------GTACTAACGACTAAGTTATG.................................................................................................................................................................................................................................................................................................................................28130.92120012000000000000000000000000000000000000000000000000000000000000
..................TGAGCATTATGAAA--------AGGTTGGG----------TCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.90180000000000000000000000000000180000000000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTT..................................................................................................................................................................................................................................................................................................................................................................................................24120.8310000000000000000000000000005311000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TAACGACTAAGTTATGTCAAAATTTAA......................................................................................................................................................................................................................................................................................................................27120.759000000000000000000000001101110020010100000000000000000000000000
..........................................................................................................TTTCTCGTCAGTTTTT------AG------------TTTTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.672000001000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CAAT---------------------------------------GTACTAACGACTAAGTTATG.................................................................................................................................................................................................................................................................................................................................24130.628003000000000000000000000000000000200001200000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGTTCGTTTGAAA-AAAATGTTCA...................................................................................................................................................................................................27130.628000000000000000000000000021201011000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAA..................................27100.606000000000000000000000000010012000000000200000000000000000000000
..................................................................................................................................................................................................................................................................................................................TAACGACTAAGTTATGTCAAAATT.........................................................................................................................................................................................................................................................................................................................24150.609000000000000000000000000111102000002100000000000000000000000000
...............................................................................................................................................................................................................................................................TTAACAAT---------------------------------------GTACTAACGACTAAGT.....................................................................................................................................................................................................................................................................................................................................24140.578006100000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAA.................................2890.565001000000000000000000000010002000010000000000000000000000000000
............................................................TGCAAGGGTATTAGATCTTTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.55110000000000000000000000000000000110000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTTCGTTTGAAA-AAAATGTTC....................................................................................................................................................................................................25130.547000000000000000000000000000231000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAA.........................................................................................................................................................................................................22150.538001010000000000000000000100010100000020100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGT.......................................26100.505000000000000000000000000100003000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................T---T-------TACCAGTTCGTTTGAAA-AAAATGTT.....................................................................................................................................................................................................27140.507000000000000000000000000210010000010200000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-A............................................................................................................................................................................................................19150.477000000000000000000000001220000010000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTTCGTTTGAAA-AAAATGTTCAT..................................................................................................................................................................................................27130.466000000000000000000000000100101011010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGTTCGTTTGAAA-AAAATGTTC....................................................................................................................................................................................................26130.466001010000000000000000000000011000011000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTTCAT..................................................................................................................................................................................................29130.466003000100000000000010000000010000000000000000000000000000000000
.....................GCATTATGAAA--------AGGTTGGG----------TCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.459000000000000000000000000000000000000900000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACA...............................2590.444000000000000000000000000010000000030000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAAAC................................2090.444000000000000000000000000000003000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................T---T-------TACCAGTTCGTTTGAAA-AAAATG.......................................................................................................................................................................................................25140.436000000000100100000000000000100011000010000000000000000000000000
........................................................................................................................................................TCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAACA..............................................................................................................................................................................................................................................................................................................................................................................................27120.425000000000000000000000000012000010010000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAACG..............................................................................................................................................................................................................................................................................................................................................................................................28120.425000000000000000000000000000011000002010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGG........................................25100.404001000000000000000000000101000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAA..........................................................................................................................................................................................................21150.406000001000000000000001000000021000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTTCGTTTGAAA-AAAATGTT.....................................................................................................................................................................................................24140.365000100000000000000000000003100000000000000000000000000000000000
...........................TGAAA--------AGGTTGGG----------TCTGCAAGGGTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.357000000000000000000000000023010100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AA...........................................................................................................................................................................................................20150.335000000000000010000000000000101010000010000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTT...................................................................................................................................................................................................................................................................................................................................................................................................23120.334000000000000000000000000001011001000000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAACC..............................................................................................................................................................................................................................................................................................................................................................................................28120.334000000000000000000000000001010110000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAAACAAGT............................2490.333000000000000000000000000000002000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAAACAAGTC--------------.............2530.331000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................TTTCTCGTCAGTTTTT------AG------------TTTTAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-.............................................................................................................................................................................................................18150.335000000001010000000000000001000000010000000000000000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................TAT---T-------TACCAGTTCGTTTGAAA-AAAATGT......................................................................................................................................................................................................28130.314000000000000000000000000010010100000100000000000000000000000000
..................TGAGCATTATGAAA--------AGGTTGGG----------TCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.306000003000000000000000000000000000003000000000000000000000000000
................................................................................................................................................................................................................................................................TAACAAT---------------------------------------GTACTAACGACTAAGTTA...................................................................................................................................................................................................................................................................................................................................25140.294004000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TAACGACTAAGTTATGTCAAAATTTA.......................................................................................................................................................................................................................................................................................................................26120.253000000000000000000000000000101000001000000000000000000000000000
............................................................TGCAAGGGTATTAGATCTTTGGCGT--G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.255000000000000000000000000005000000000000000000000000000000000000
........................................................................................................................................................TCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAACAA.............................................................................................................................................................................................................................................................................................................................................................................................28120.253000000000000000000000000110000000010000000000000000000000000000
.................................................................................................................................................TAAGTACTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAAT.....................................................................................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAAA...............................................................................................................................................................................................................................................................................................................................................................................................27120.253000000000000100000000000001000001000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AT---T-------TACCAGTTCGTTTGAAA-AAAATGT......................................................................................................................................................................................................27130.233000000000000000000000000010110000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CAAT---------------------------------------GTACTAACGACTAAGTTATGTC...............................................................................................................................................................................................................................................................................................................................26130.233000010000000000000000000000000000000002000000000000000000000000
...................................................................................................................................................................................................................................................................CAAT---------------------------------------GTACTAACGACTAAGTTATGTCA..............................................................................................................................................................................................................................................................................................................................27130.233000000000000000000000000001100000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGTTCGTTTGAAA-AAAATGTTCAT..................................................................................................................................................................................................28130.233000000000000000000000000000001011000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAGG............................2890.222000000000000000000000000020000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAA.................................2590.222001000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAGT............................2790.222000000000000000000000000010000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAAACA...............................2190.222000000000000000000000000000002000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCATTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGG........................................2890.222000000000000000000000000011000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTA.....................................................................................................................................................................................................26140.213000000000000000000000000000000000011100000000000000000000000000
...............................................................................................................................................................................................................................................................TTAACAAT---------------------------------------GTACTAACGACTAAGTT....................................................................................................................................................................................................................................................................................................................................25140.213003000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGAAA-AAAA.........................................................................................................................................................................................................26140.213000000000000000000000000010000100000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAA...................................27100.202000000000000000000000000000001000001000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TAACGACTAAGTTATGTCAAAA...........................................................................................................................................................................................................................................................................................................................22150.203000000000000000000000000000110000000010000000000000000000000000
...................................................................................GT--GCCGAAGATAGCCCTT--CTTTCTCGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.201000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGT.......................................22110.182001000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAA......................................................................................................................................................................................................................................................................................................................................................................................................20120.172000000000000000000000000001100000000000000000000000000000000000
........................................................................................................................................................TCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAA................................................................................................................................................................................................................................................................................................................................................................................................25120.172000000000000000000000000000100000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTAAAATT-CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTT...................................................................................................................................................................................................................28130.152000000000000000000000000000100000010000000000000000000000000000
...................................................................................................................................................................................................................................................................CAAT---------------------------------------GTACTAACGACTAAGTTATGT................................................................................................................................................................................................................................................................................................................................25130.152000100000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTTCGTTTGAAA-AAAATGTTCATC.................................................................................................................................................................................................28130.152000000000000000000000000100000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTAACAAT---------------------------------------GTACTAACGACTAAGTTAT..................................................................................................................................................................................................................................................................................................................................27130.152001100000000000000000000000000000000000000000000000000000000000
..................TGAGCATTATGAAA--------AGGTTGGG----------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.153000000000000000000000000000000200000010000000000000000000000000
................TATGAGCATTATGAAA--------AGGTTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.153000000000000000000000000000000030000000000000000000000000000000
........................TTATGAAA--------AGGTTGGG----------TCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153000000000300000000000000000000000000000000000000000000000000000
..................TGAGCATTATGAAA--------AGGTTGGG----------TC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000003000000000000000000000000000000000000000000
.....................GCATTATGAAA--------AGGTTGGG----------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153000000300000000000000000000000000000000000000000000000000000000
.........................TATGAAA--------AGGTTGGG----------TCTGCAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000000000300000000000000000000000000000000
...........................TGAAA--------AGGTTGGG----------TCTGCAAGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.153000000003000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTTA....................................................................................................................................................................................................27140.142001000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTTAG...................................................................................................................................................................................................28140.142000000000000000000000000010100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTTCGTTTGAAA-AAAATGTTCA...................................................................................................................................................................................................25140.142000000000000000000000000000110000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TAT---T-------TACCAGTTCGTTTGAAA-AAA..........................................................................................................................................................................................................24140.142000000000000000000000000000020000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTTGAAA-AAAATGTTCATTC................................................................................................................................................................................................24140.142000000000000000000000000001000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAATGTTG....................................................................................................................................................................................................27140.142000010000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGA................................................................................................................................................................................................................23140.142000000000000000000000000000100010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGAAA-AAAA.........................................................................................................................................................................................................29140.142000000000000000000000000000020000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................T-CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGAAA-AA...........................................................................................................................................................................................................28140.142000000000000000000000000000000011000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TT-CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGAAA-A............................................................................................................................................................................................................28140.142000000000000000000000000000010001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AATT-CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGA................................................................................................................................................................................................................27140.142001000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................T-CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGAAA-A............................................................................................................................................................................................................27140.142000000000000000000001000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................CAAT---------------------------------------GTACTAACGACTAAGTTA...................................................................................................................................................................................................................................................................................................................................22140.142002000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCGTTTGAAA-AAAATG.......................................................................................................................................................................................................20150.132000002000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TAACGACTAAGTTATGTCAAAAT..........................................................................................................................................................................................................................................................................................................................23150.132000000000000000000000000000000000011000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAAAA........................................................................................................................................................................................................23150.132000000000000000000000000000001000000001000000000000000000000000
....................................................................................................................................................................................................................................................................AAT---------------------------------------GTACTAACGACTAAGTTATG.................................................................................................................................................................................................................................................................................................................................23150.132001000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AAATG........................................................................................................................................................................................................23150.132000000000000000000000001000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................T-------TACCAGTTCGTTTGAAA-AATG.........................................................................................................................................................................................................22160.132000000000000000000000000000010000000000100000000000000000000000
....................................................................................................................................................................................................................................................................AAT---------------------------------------GTACTAACGACTAAGT.....................................................................................................................................................................................................................................................................................................................................19160.132000000000000000000000000000000000000000200000000000000000000000
...............................................................................................................................................................................................................................................................TTAACAAT---------------------------------------GTACTAACGACTAAG......................................................................................................................................................................................................................................................................................................................................23160.132002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAAA.................................1990.111000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAG.............................2890.111000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAA.....................................2890.111000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAGT............................2890.111000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAAC................................2890.111000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAAACAAGTT--------------C------------2690.111000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAA.................................2990.111001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACA...............................2490.111000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAGG............................2790.111000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAAC................................2690.111000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CTTTTAGGTAAAAAACAAG.............................2090.111000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAG.............................2990.111001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAAA.............................2790.111000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAACAA..............................2690.111000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTAGGTAAAAAACAAG.............................1990.111000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAA..................................26100.101000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGGTAAAAAACAAGT............................18100.101000000000000000000000000000000000001000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC-----AAT----------------------------------------AG--CTTTTAGGTAAAAAG.................................23100.101000000000000000000000000100000000000000000000000000000000000000
............................................................TGCAAGGGTATTAGATCTTTGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------AG--CTTTTAGGTAAAAA..................................18100.101000000000000000000000000000001000000000000000000000000000000000
................TATGAGCATTATGAAA--------AGGTTGGG----------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000001000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAAAA...................................26100.101000000000000000000000000001000000000000000000000000000000000000
.........................TATGAAA--------AGGTTGGG----------TCTGCAAGGGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000000000002000000000000000000000000000000
.....................GCATTATGAAA--------AGGTTGGG----------TCTGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000002000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGT.......................................25100.101000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAG.........................................25100.101000000000000000000000000000010000000000000000000000000000000000
...........................................................................TCTTTGGCGT--GCCGAAGATAGCCCTT--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAGGTAA.....................................25100.101001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TAAGTTATGTCAAAATTTAAAATT-CCT--............................................................................................................................................................................................................................................................................................................27110.091000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTAG.........................................21110.091000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAAG...............................................................................................................................................................................................................................................................................................................................................................................................27120.081000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................TCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAAC...............................................................................................................................................................................................................................................................................................................................................................................................26120.081000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTAAT...............................................................................................................................................................................................................................................................................................................................................................................................27120.081000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CTAACGACTAAGTTATGTCAAAATTT........................................................................................................................................................................................................................................................................................................................26120.081000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CTAAGTTATGTCAAAATTTAAAATT-CCC--............................................................................................................................................................................................................................................................................................................28120.081000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATT....................................................................................................................................................................................................................................................................................................................................................................................................22120.081000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA--------------------------------------------------------------------------------------TTTTC-----AAT----------------------------------------AG--CTTTTA..........................................19120.081000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................CTCAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTA.................................................................................................................................................................................................................................................................................................................................................................................................25120.081000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................AACGACTAAGTTATGTCAAAATTT........................................................................................................................................................................................................................................................................................................................24120.081000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CTAAGTTATGTCAAAATTTAAAATT-CC...............................................................................................................................................................................................................................................................................................................27120.081000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................CAG---------------------------------------------------------------------------------TACAATTTCAAA-AAATTTTA.................................................................................................................................................................................................................................................................................................................................................................................................23120.081000000001000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------------------TAT---T-------TACCAGTTCGTTTGAAA-AAAATG.......................................................................................................................................................................................................28130.081000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................ATTTAAAATT-CCT--T--------------------------------------------------------------TAT---T-------TACCAGT........................................................................................................................................................................................................................25130.081000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGTTCGTTTGAAA-AAAATGTTCA...................................................................................................................................................................................................26130.081000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................AACAAT---------------------------------------GTACTAACGACTAAGTTATG.................................................................................................................................................................................................................................................................................................................................26130.081000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TAACAAT---------------------------------------GTACTAACGACTAAGTTATG.................................................................................................................................................................................................................................................................................................................................27130.081001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TACAATTTCAAA-AAATTTTAACAAT---------------------------------------G....................................................................................................................................................................................................................................................................................................................................................26130.081000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................TTTCAAA-AAATTTTAACA..............................................................................................................................................................................................................................................................................................................................................................................................18130.081000000000000000000000000000000001000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTTAAAATT-CCT--T--------------------------------------------------------------TAT---T-------TACCAGT........................................................................................................................................................................................................................24130.081000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TAT---T-------TACCAGTTCGTTTGAAA-AAAATG.......................................................................................................................................................................................................27130.081000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TAAAATT-CCT--T--------------------------------------------------------------TAT---T-------TACCAGTTCGTT...................................................................................................................................................................................................................27130.081000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TAT---T-------TACCAGTTCGTTTGAAA-AAAATCC......................................................................................................................................................................................................28140.071000000000000000000000000000000010000000000000000000000000000000
droMoj3
TAGGGAAGGAA----ACCA------------------------AACAT----------GTTACAG----------------------------------------------------------------------------------AAATTTTGA------------------------------------------AAAATATATTGGATCTGTTTTTATACCCAACAATAAAAA----AAA----------------------------AAAAAAAAATATAAAATAAAATAAATA-------------AT----------------------TA-AT--A------------------------------------------------------------------------------ATA-------------TAAAAGTAAATATTAAATAA------------------------TATAT-------------------------------------------------------------AATAA-----------------------------------------------------------------------ATA----A---A-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATAACAACTGG----AAGA-----------------G------------------AAA--T------------------------------------------------------------------------------------------AAT------------------GAGAATATAAATTTTAG-------------------------------------------------------------------------------------------------------ACAA--A-------------TT----------------------TTC----------------------------------------------------------------TCTTATTA----------ACAAATATATT---------------------------------------------------------------------------------------------------------------------TTTG----------------------------------------------------------------------AAAA----A---T-------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TTGGAATTCAA----CAA----------------------CAACAACA----------ACAA--------CAATAACAACGATGA--GATGAAGAT------------------------------------------------------------------------------------------TAA-------------------------------------------------------------------------------------------------------ATAG--A-------------AT----------------------CC-TC--CCTC------------------------------GCGG----------------------TATCCTG--------------------CATGTAC-AAAAAGTTTATCCTTATTTA------------------------TAAAA------------GAATGT-------------TGAAT-------------T----------TTGATACAAAATTGTTTTGTCTA--------------------------------------------------------C----G---G-------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................A--------CAATAACAACGATGA--GATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................TAACAACGATGA--GATGAAGAT------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-AAAAAGTTTATCCTTA.............................................................................................................................................................................................1911.0010100000000
...........................................................CAA--------CAATAACAACGATGA--GATGAAGAT------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
..........................................................ACAA--------CAATAACAACGATGA--GAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
droPer2
TTACAGAAAAA----ATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATATATAGAAAATGTAAGAAATA-------------AT----------------------TA-TT--ATTC------------------------------TCAG----------------------AATTTTGTA----------TATA----------------------TATTTATTTA-------------------------------------------------------------------------------------TGTTTTGTTGTGACCCTTCTTTATATTCTGC--------------------------------------------------ATT----G---T-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TATGACTGAAC------------GATCGGAAATGGCA---CAATCTTA----------ACTGCAAGGGTATATTTACTTCGGCTCCGTCCGAAGTTAGCTTTG--CTTTCTTGTTTTTTAATAAAAAATTATTACGGTACGTTTA---------------------------------------------------------------------------------TACCACATTAA----AAA----------------------------ACATGTATATTTAAAATACATTAAACA-------------AA------------TTTTTAAAAGT-TTTTATTTTGCAGGTTCCATTAAATTGTT-----------------------------------------------------------------------CAAAGGTAAATTGTTCAATG------------------------TAAAC------------AGCAGA-------------TGAAT-------------C----------TT------------------------------------------------------AAGCCCACACCACAACTTTGTAGA----A---G-------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....ACTGAAC------------GATCGGAAATGGCA---CAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.101100000
..TGACTGAAC------------GATCGGAAATGGCA---CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
TATGACTGAAC------------GATCGGAAATGGCA---C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
...GACTGAAC------------GATCGGAAATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
droBip1
TAA--------------------------------------------------------CTGCAAGGGTATATCAACTTCGGCTCCGCCCGAAGTTAGCTTTC--CTTTCTTGTTTTGTT-----------------------TATATGTACATAGTAAGGATGAATACTGCTAACAAAAAGAGATTAAATTAATCAATCAGTAA---------------------TTCCACACC--TACAAAACC--------------TTGGGCTATTTTAAAAAGACATACAATATGAAAAAAATA-------------TA----------------------TT-T-----------------------------------------TTATATAATTAT-------------------ATATAATTTTTT-AACAA------CAGGA-----CATCTTTGTTAC------------------------AAATT------------GA---------------AG---------------------ACAT-----AA-----------------------------------------------------------CTGGGTCAATAGTGTATAAACAG---C-------SizeHit CountTotal NormTotal
No Reads
droKik1
TAGGTAAAATG----TAATG--------------------AAATAATA----------TCTGCAAGGGTATACAAACTTCGGCGT--GCCGAAGTTAGCTT-C--CTTTCTTGTTGCTTGTAAAATATGT------------ACTTTAAATTTAGG------------------------------------------TAAATA-------------------------------AACAGAAATATAAA-AAAGTCTAACAAAACACATACATA------------------------TAAT----------------------------------A-TA----------------------------------------------------------------TCATCTA----------AAATAAAAT--------------------------------------------------------ATA---------------------------CCC-----------GTAGCCTT---------------------------------------AGCTTAAT------AA--ATAATTAAA---------------T-----AAA---GAAAATACAATTSizeHit CountTotal NormTotal
No Reads
droFic1
TGGAAAATTAA----TAGA-----------------AAAATCTTCATA----------GCTGCAAGGGTATATAAGCTTCGGCTT--GCCGAAGCTAGCTT-C--CTTTCTTTTTTTTTT--AAA------------------------------------------------------------------------------------------------------CCCACTTG--AACAACCCC--------------AAAATCCATTTTAA------------------------TAATT-----------------------------------T----------------------------------------------------------------ACTTTTTA----------ATTTAACTT--------------------------------------------------------TTA---------------------------CTTTTTACTGATTGTTGTTTTTTGTTT-----TTT-----------------T----------------GCGT------TTT---TTT---------------T-----AAA---GA--TTACAA--SizeHit CountTotal NormTotal
No Reads
droEle1
CAAAAGTATTT----AATTC--------------------TTGCAATA----------GCTGCAAGGGTATATGAACTTCGGCTT--GCCGAAGTTTGCTT-T--CTTTCTTGTTTTTTT-----------------------T--ATATACA--------------------------------------------------------------------------------------------------------------------------------TAATAAAACTAAAAAACA-------------TT----------------------TT-TT--TTTCTCAAAATACATAAAATTGTATAAATAA------------------------------------------------------------------------TAATTATTTTGGATTTTTTTGAATAGCGCTTA-TAATGATTA--CGGATG-----------AAAATATGATTT---------TTGAA------------------------------------------------------------------TTTTTACTTTATAAGTCCATT--GTATA----A---G-------SizeHit CountTotal NormTotal
No Reads
droRho1
TAATTTACAGA---------------------------------GTAT----------TCTGCAAGGGTATATCAACTTCGGCTCCGCCCGAAGTTAGCTTTC--CTTTCTTGTTAAAATAT------AA------------TTTTTGAATTTTGG---------------------------------------------------------------------------------------------------------------------------------------AGAAATTA-------------TA----------------------TT-T-----------------------------------------ATATTTCTTTAT-------------------TTATTGTTTAATA---AG---------------------------------------------------------------TTG-TAAAATCATGA--------TTT-----------------------------------------------TTTGCAACTT-AATTTAAT------AA--ATCTTTTTAAA-------------T-----CAA---GGAA--TCGATTSizeHit CountTotal NormTotal
No Reads
droBia1
CAAATTTAATA-----------------------------TGATGTTA----------CCAGCAAGGGTTTACAAACTCCGGCTT--GCCGAAATTAACTT-C--CTTTCTTGTTTTTAATTA------------------------------------------------------------------------------------------------------------TTTTAA----GAA----------------------------ATAAAAGT-------------------------------------------------------------------------------------------------------------------------------TAGCA-------TCAATA-------------ATTAAACGGTTA------GCATAGCTATC--TGGCGCTCTTTGAAGGTTAACCCGTTAACAGAGTGA-----------TG--------------------------------------------------------------GT--T------AA--CTTATTCTTTCATTACGAGTGAATTGTGTATAAGTA------------SizeHit CountTotal NormTotal
No Reads
droTak1
TAGTCTAGTCAAGTTTTAAT--------------------TCGTAAAA----------TCTGCAAGGGTATTAAAACTTCGGCTT--GCCGAAGTTAGCTT-C--CGTCCTCGTTTTAAATCT--------------------G--ATTTGCA-----------------------------------------------------------------------------GCTTAAA-----------ATG---------------------AAATTTAACTCT-------------------------------------------------------------------------------------------------------------TAAATTTCCTAAATTTTCT-------TCAATA-------------ACTATAGAGATATCTCTTAG------------------------CAAGTA--AGGATG-----------A--------AACGTGTCTTGTTCGAAGCTGTAACTT-----TAT-----------------T----------------GTGTTG-T--TTT---------------------T-----TTG---GA--A-------SizeHit CountTotal NormTotal
No Reads
droEug1
CTGCTTTCCAATAA-AACA------------------------ACCATGTATAAGCAA--T------------------------------------------------------------------------------------------ACA------------------GAAACAATTA----------------ATTTTAAGTCGGAAACGTTTGTGAACC-----------------------------------AAATACTAAATTAA------------------------AATAT-----------------------------------T----------------------------------------------------------------ATTAATTA----------ATTAAAATATT--------------------------------------------------------A---------------------------TTTAAAATTTATTTT------------TATTTTATTA---------------------------------------T--TAT---------------------T-----TTG---A---T-------SizeHit CountTotal NormTotal
No Reads
dm3
ACAGTGCTATC----ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------GA--CTATTTGGATGACTATGGCAAAATAGGCTACAAACA------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGGATGACTATGGCAAAATAGGC....................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....TGCTATC----ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------GA--CTATTTGGA.......................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGCTATC----ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------GA--CTATTTGGATGAC...................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATGACTATGGCAAAATAGGC....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGATGACTATGGCAAAATAGGC....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........C----ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------GA--CTATTTGGATGACTATGGCA............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--CTATTTGGATGACTATGGCAAAATAGGC....................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACAGTGCTATC----ACGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------GA--CTATTTGGATGACTATGGCAAAATAGGCTACAAGCA------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
GTATGGTGTTA----AAA---GTAATAAGAAA-----------------------------------------------------------------------------------------------------------------------------------------------TGAATTT----------------TCTGTAA--------------------------TTTTAA-----------AAG---------------------AAAT------ATAATA--------------GTTCTTAAAACCTAATATTGTCTTTGTCAATAATT-CT--------------------GTTTCTACGATTAA--------------------------------------T-------TATTA---TT---------------------------------------------------------------------------------------------------------------------TTGTTAGGTAAGTTTTCCTTTAACAACCTGTTTCTTA--------TATCTT----------------------------T----T---T-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................ATTT----------------TCTGTAA--------------------------TTTTAA-----------AAG---------------------A..................................................................................................................................................................................................................................................................................................................................................................................2180.1310010
droYak3
TATTAAAATTT----AAG---A------------------ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAATCAAAAAGGGC-------------TC----------------------TT-T--------------ATTTATAACTATTTAAAAGA------------------------------------------------------------------------TATTTTTCTTGG------------------------AAAAT------------GAGTAATAA--------TTCCTAGCATATTAATTTTTATAGATT-----TAT-----------------C----------------G---------------------------------------------C---G-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AAAGAAAAACA----TTAA---T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGAAACCCACATACGTTACAT------------TAAATCTTATAATTTTTAA----------TAAA----------------------TATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 05:01 AM