ID:

dwi_255

 Coordinate:

scf2_1100000001990:14741-14891 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.1 -37.1 -36.7 -36.7

Flybase annnotation

CDS [Dwil\GK20218-cds]; exon [dwil_GLEANR_2877:2]; intron [Dwil\GK20218-in]

No Repeatable elements found

mature
  1. dwi_255  scf2_1100000001990:14824-14846 -
  2. scf2_1100000004585:3058990-3059012 -
  3. scf2_1100000004947:1205311-1205333 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAATGGCAAGCATCGGTCTCGGGGCACAGACCGTACATATGACATTGTTAGCGATGCCATCGATGATGGTCCCTCTTATTCTGGGAGTGGATTTCCTTCGAAACATAGGAACTTCTATACGTTGTGGAGGTTATATGTTACAGTTGCCCCCTTTCGATAAGCCCCACAGTCCCATCAATTCTACAATTCATCCATCGCTAGTGGCGGATGACCACACGCAGCCTAATGCGTCTTACCCAAATAGCACAACA
**************************************************....((....(((((((((............(((((((((.......((((((((((..((((((((((...)))))))))).))))))..............))))......))))..))))).............))))).)))).)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
.............................ACCGTACATATGACATTGTTAGCGA..................................................................................................................................................................................................... 25 0 20 0.45 9 8 1
...............................................................................................CTTCGAAACATAGGAACTTCTAT..................................................................................................................................... 23 0 3 0.33 1 1 0
............................................................................TATTCTGGGAGTGGATTTCCTTCGAAAC................................................................................................................................................... 28 0 3 0.33 1 1 0
...........................................ATTGTTAGCGATGCCATCGATGA......................................................................................................................................................................................... 23 0 20 0.25 5 5 0
................................................................................................................................................................................................................TGACCGCACGCAGCCGATTG....................... 20 3 8 0.25 2 2 0
.........GCATCGGTGTCGGGACCC................................................................................................................................................................................................................................ 18 3 20 0.05 1 1 0
........................................GACATTGTTAGCGATGCCATCGATGA......................................................................................................................................................................................... 26 0 20 0.05 1 1 0
...........................AGACCGTACATATGACATTGTTAGCGA..................................................................................................................................................................................................... 27 0 20 0.05 1 1 0
...............................CGTACATATGACATTGTTAGCGA..................................................................................................................................................................................................... 23 0 20 0.05 1 1 0
.................................TACATATGACATTGTTAGCGATGCCA................................................................................................................................................................................................ 26 0 20 0.05 1 1 0
............................................TTGTTAGCGATGCCATCGATGATG....................................................................................................................................................................................... 24 0 20 0.05 1 0 1
..........................................................................................................AGGAACTTCTATACGTTGTGGAGGT........................................................................................................................ 25 0 20 0.05 1 0 1
.............................................................................................................AACTTCTATACGTTGTGGAGG......................................................................................................................... 21 0 20 0.05 1 1 0

Anti-sense strand reads

GTTACCGTTCGTAGCCAGAGCCCCGTGTCTGGCATGTATACTGTAACAATCGCTACGGTAGCTACTACCAGGGAGAATAAGACCCTCACCTAAAGGAAGCTTTGTATCCTTGAAGATATGCAACACCTCCAATATACAATGTCAACGGGGGAAAGCTATTCGGGGTGTCAGGGTAGTTAAGATGTTAAGTAGGTAGCGATCACCGCCTACTGGTGTGCGTCGGATTACGCAGAATGGGTTTATCGTGTTGT
**************************************************....((....(((((((((............(((((((((.......((((((((((..((((((((((...)))))))))).))))))..............))))......))))..))))).............))))).)))).)).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
............................................................................................AAGGAAGCTTTGTATCCTTGAAGATAT.................................................................................................................................... 27 0 3 9.00 27 7 20 0 0
...............CAGAGCCCCGTGTCTGGCATGTAT.................................................................................................................................................................................................................... 24 0 20 2.25 45 37 0 8 0
.......................CGTGTCTGGCATGTATACTGTAACAAT......................................................................................................................................................................................................... 27 0 20 2.15 43 2 41 0 0
......................................................................................CACCTAAAGGAAGCTTTGTATCCT............................................................................................................................................. 24 0 3 2.00 6 6 0 0 0
.............................................................................................AGGAAGCTTTGTATCCTTGAAGATAT.................................................................................................................................... 26 0 3 2.00 6 2 4 0 0
..............................................................................AAGACCCTCACCTAAAGGAAGCTTTGT.................................................................................................................................................. 27 0 3 1.67 5 5 0 0 0
.................................................................................ACCCTCACCTAAAGGAAGCTTTGTATCCT............................................................................................................................................. 29 0 3 1.67 5 5 0 0 0
...........................................................................................AAAGGAAGCTTTGTATCCTTGAAGATAT.................................................................................................................................... 28 0 3 1.33 4 4 0 0 0
......................................................................................CACCTAAAGGAAGCTTTGTATCCTT............................................................................................................................................ 25 0 3 1.33 4 4 0 0 0
..........................GTCTGGCATGTATACTGTAACAATCGC...................................................................................................................................................................................................... 27 0 20 1.10 22 20 2 0 0
..............CCAGAGCCCCGTGTCTGGCATGTAT.................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0
...................................................................................CCTCACCTAAAGGAAGCTTTGTATCCT............................................................................................................................................. 27 0 3 0.67 2 2 0 0 0
.......................................................................................ACCTAAAGGAAGCTTTGTATCCTT............................................................................................................................................ 24 0 3 0.67 2 2 0 0 0
.................................................................................ACCCTCACCTAAAGGAAGCTTTGTAT................................................................................................................................................ 26 0 3 0.67 2 1 1 0 0
..................................................................................CCCTCACCTAAAGGAAGCTTTGTATCCT............................................................................................................................................. 28 0 3 0.67 2 2 0 0 0
...........................................................................................TAAGGAAGCTTTGTATCCTTGAAGATAT.................................................................................................................................... 28 1 3 0.67 2 1 1 0 0
................................................................................GACCCTCACCTAAAGGAAGCTTTGTAT................................................................................................................................................ 27 0 3 0.67 2 2 0 0 0
.........................TGTCTGGCATGTATACTGTAACAAT......................................................................................................................................................................................................... 25 0 20 0.55 11 9 2 0 0
.......................CGTGTCTGGCATGTATACTGTAACAA.......................................................................................................................................................................................................... 26 0 20 0.50 10 0 10 0 0
..........................GTCTGGCATGTATACTGTAACAAT......................................................................................................................................................................................................... 24 0 20 0.40 8 8 0 0 0
........................GTGTCTGGCATGTATACTGTAACAAT......................................................................................................................................................................................................... 26 0 20 0.35 7 3 4 0 0
......................................................................................................TGTATCCTTGAAGATATGCAACACCT........................................................................................................................... 26 0 20 0.35 7 1 6 0 0
...............................................................................TGACCCTCACCTAAAGGAAGCTTTGTAT................................................................................................................................................ 28 1 3 0.33 1 1 0 0 0
...........................................................................................AAGGGAAGCTTTGTATCCTTGAAGATAT.................................................................................................................................... 28 1 3 0.33 1 1 0 0 0
............................................................................................AAGGAAGCTTTGTATCCTTGAGGATAT.................................................................................................................................... 27 1 3 0.33 1 0 1 0 0
................................................................................GACCCTCACCTAAAGGAAGCTTTGTA................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0
....................................................................................................TTTGTATCCTTGAAGATATGCAACACCT........................................................................................................................... 28 0 3 0.33 1 1 0 0 0
...........................................................................................AAAGGAAGCTTTGTATCCTTGAAGATA..................................................................................................................................... 27 0 3 0.33 1 1 0 0 0
.................................................................................ACCCTCACCTAAAGGAAGCTTTGTATCC.............................................................................................................................................. 28 0 3 0.33 1 1 0 0 0
.....................................................................................TCACCTAAAGGAAGCTTTGTATCCT............................................................................................................................................. 25 0 3 0.33 1 1 0 0 0
.......................................................................................ACCTAAAGGAAGCTTTGTATCCTTGAAGA....................................................................................................................................... 29 0 3 0.33 1 1 0 0 0
...............................................................................AGACCCTCACCTAAAGGAAGCTTTGT.................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0
...............................................................................................GAAGCTTTGTATCCTTGAAGATAT.................................................................................................................................... 24 0 3 0.33 1 0 1 0 0
..............................................................................................GGAAGCTTTGTATCCTTGAAGATATGC.................................................................................................................................. 27 0 3 0.33 1 1 0 0 0
..............................................................................AAGACCCTCACCTAAAGGAAGCTT..................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0
............................................................................................AAGGAAGCTTTGTATCCTTGAAGATA..................................................................................................................................... 26 0 3 0.33 1 1 0 0 0
.................................................................................................AGCTTTGTATCCTTGAAGATATGCAA................................................................................................................................ 26 0 3 0.33 1 1 0 0 0
.........................................................................................CTAAAGGAAGCTTTGTATCCT............................................................................................................................................. 21 0 3 0.33 1 1 0 0 0
................................................................CTTCCAGGGTGAATAAGA......................................................................................................................................................................... 18 2 4 0.25 1 0 1 0 0
............................................................................................AAGGAAGCTTTGTATCCCTGAAGATAT.................................................................................................................................... 27 1 4 0.25 1 1 0 0 0
...................................................................................................................................................GGGGAAAGCTATTCGGGGTGT................................................................................... 21 0 20 0.20 4 2 2 0 0
......................................................................................CACCTAAAGGAGGCTTTGTATCCTT............................................................................................................................................ 25 1 5 0.20 1 1 0 0 0
..........................GTCTGGCATGTATACTGTAACAATCGCT..................................................................................................................................................................................................... 28 0 20 0.20 4 4 0 0 0
...........................................................................................AAAAAAAGCTTTGTATCCTTGAAGATAT.................................................................................................................................... 28 2 6 0.17 1 1 0 0 0
.......................................................................................................................................................................................GTAAAGCAGTTAGCGATCAC................................................ 20 3 6 0.17 1 0 0 0 1
.................GAGCCCCGTGTCTGGCATGTAT.................................................................................................................................................................................................................... 22 0 20 0.15 3 3 0 0 0
..................AGCCCCGTGTCTGGCATGTATACTGT............................................................................................................................................................................................................... 26 0 20 0.15 3 2 1 0 0
..............................GGCATGTATACTGTAACAATCGCTAC................................................................................................................................................................................................... 26 0 20 0.15 3 1 2 0 0
.....................CCCGTGTCTGGCATGTATACTGTAACAA.......................................................................................................................................................................................................... 28 0 20 0.15 3 2 1 0 0
.................................................................................................................................................CGGGGGAAAGCTATTCGGGGTGT................................................................................... 23 0 20 0.15 3 0 3 0 0
..........................................GTAACAATCGCTACGGTAGCTACTAC....................................................................................................................................................................................... 26 0 20 0.15 3 1 2 0 0
............................CTGGCATGTATACTGTAACAATCGC...................................................................................................................................................................................................... 25 0 20 0.15 3 0 3 0 0
.........................................................................................................ATCCTTGAAGATATGCAACACCTCCAAT...................................................................................................................... 28 0 20 0.10 2 0 2 0 0
.....................CCCGTGTCTGGCATGTATACTGTAACAAT......................................................................................................................................................................................................... 29 0 20 0.10 2 2 0 0 0
...............................................................................................................................................................................................GGTAGCGATCACCGCCTACTGGTGT................................... 25 0 20 0.10 2 1 1 0 0
...............CAGAGCCCCGTGTCTGGCATGTATACT................................................................................................................................................................................................................. 27 0 20 0.10 2 1 1 0 0
................AGAGCCCCGTGTCTGGCATGTAT.................................................................................................................................................................................................................... 23 0 20 0.10 2 0 2 0 0
.................GAGCCCCGTGTCTGGCATGTATACT................................................................................................................................................................................................................. 25 0 20 0.10 2 1 1 0 0
..........................GTCTGACATGTATACTGTAACAATCG....................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0
..........................................GTAACAATCGCTACGGTAGCTAC.......................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0
............................CTGGCATGTATACTGTAACAATCGCTAC................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
............................................................................................................................................GTCAACGGGGGAAAGCTAT............................................................................................ 19 0 20 0.05 1 1 0 0 0
................TGAGCCCCGTGTCTGGCATGTATACT................................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0
......................CCGTGTCTGGCATGTATACTGTAAC............................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0
...........................................................................................................CCTTGAAGATATGCAACACCTCCAAT...................................................................................................................... 26 0 20 0.05 1 0 1 0 0
........................................CTGTAACAATCGCTACGGTAGCT............................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0
......................CCGTGTCTGGCATGTATACTGTAACAAT......................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
..................AGCCCCGTGTCTGGCATGTATACT................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
....................................................................................................................................................GAGAAAGCTATTCGGGGTGT................................................................................... 20 1 20 0.05 1 0 1 0 0
..................................................................................................................................................GGGGGAAAGCTATTCGGG....................................................................................... 18 0 20 0.05 1 1 0 0 0
.....................................................................................................TTGTATCCTTGAAGATATGCAACACCT........................................................................................................................... 27 0 20 0.05 1 0 1 0 0
.....................................................................................................................................................GGAAAGCTATTCGGGGTGT................................................................................... 19 0 20 0.05 1 0 1 0 0
.........................................TGTAACAATCGCTACGGTAGCTACTAC....................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
................GGTGCCCCGTGTCTGGCATGTATACT................................................................................................................................................................................................................. 26 2 20 0.05 1 0 0 1 0
............................CTGGCATGTATACTGTAACAATCGCT..................................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0
..................................................................................................................................................GGGGGAAAGCTATTCGGGGTGTCAGG............................................................................... 26 0 20 0.05 1 1 0 0 0
..........................................................................................................TCCTTGAAGATATGCAACACCTCCAAT...................................................................................................................... 27 0 20 0.05 1 1 0 0 0
..................AGCCCCGTGTCTGGCATGTATACTGTAA............................................................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0
..................AGCCCCGTGTCTGGCATGTA..................................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0
........................AAGTCTGGCATGTATACTGTAACAAT......................................................................................................................................................................................................... 26 2 20 0.05 1 1 0 0 0
.............................TGGCATGTATACTGTAACAATCGCTAC................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
....................CCCCGTGTCTGGCATGTAT.................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0
.....................................................................................................ATGTATCCTTGAAGATATGCAACACCT........................................................................................................................... 27 1 20 0.05 1 1 0 0 0
...............................GCATGTATACTGTAACAATCGCTACGGT................................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0
.......................CGTGTCTGGCATGTATACCGTAACAAT......................................................................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0
.......................................ACTGTAACAATCGCTACGGTAGCT............................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................CTATTAAGTAGGTAGGGAT................................................... 19 3 20 0.05 1 1 0 0 0
...............................GCATGTATACTGTAACAATCGCTAC................................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0
..................................................................................................................................................GGGGGAAAGCTATTCGGGGTGT................................................................................... 22 0 20 0.05 1 0 1 0 0
.............................................................................................................................................TCAACGGGGGGAAGAGATTCG......................................................................................... 21 3 20 0.05 1 1 0 0 0
..........................................GTAACAATCGCTACGGTAGCT............................................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0
.........................TGTCTGGCATGTATACTGTAACAATC........................................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0
....................................................................................................................................................GGGAAAGCTATTCGGGGTGT................................................................................... 20 0 20 0.05 1 0 1 0 0
.......................CGTGTCTGGCATGTATACTGTAAC............................................................................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0
........................GTGTCTGGCATGTATACTGTAACAA.......................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000001990:14691-14941 - dwi_255 CAAT----------------------------GG----CAAGCATCGGTCTCGGGGCACAGACCGTACATATGACATTGTTAGCGATGCCATCGATGATGGTCCCTCTTATTCTGGGAGTGGATTTCCTTCGAAACATAGGAACTTCTATACGTTGTGGAGGTTATATG-----------TTACAGTTG-----CCCCCTTTCGATAA-------------GCCCCACA-GTCCCATCAATTCTACAA----TTCATCCATCGCTAGTGGCGGATGACCACACGCAGC-CTA-ATGCGTCTTACCCAAATAGCACAACA
droVir3 scaffold_12736:511440-511561 + GT-------------------------------------AGACGTCAGCTTAGGGGAAAAAACGATCAGCATGACGATGCTCATCATGCCCTCAATGTTGGACCACGTAATCCTGGGTATGGATTTCTTGGGTGCAATGGGCACTACAATACGCTGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_4333:2412-2550 + GG------------------------------------CGACGATCAGCCTGGGGAATCAGCAAATACAGATTCCGTTGCTGATTCTGCCAGGGGTGATCGAAGATCTAGTGCTGGGCTGGGATTTCTTGGCCAGCATGGGCACCACACTGGAGTGCGGTGGCTTGACA-----------TTGAAG-------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_8293:6304-6319 - CC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTATAACTGAGCA
dp5 Unknown_group_410:7906-8069 - TA-------------------------------G----CGCGCTTCAAACTAGACGAACAAGAGGTACGGATGCCACTCCTGGTACTACCCAATATGGTAGAGCAAGCCATCATAGGGATGGATTTCCTGTGCGCCATTGAAACCACAATACAATGTGGCGCCACACGC-----------CTCCATCTC--------------CAAGG-------------CCCCCAAC-GCCCC---------------------------------------------------------------------------------ATC
droPer2 scaffold_196:83227-83390 + TA-------------------------------G----CGCGCGTCAAACTAGACGAACAAGAGGTACAGATGCCACTCCTGGAACTACCCAATATGGTAGAGCAAGCCATCATAGGGATGGATTTCCTGTTCGCTATTGAAACCACAATACAATGTGGCGCCACACGC-----------CTCCATCTC--------------CAAGG-------------CCCCCAAC-GCCCC---------------------------------------------------------------------------------ATC
droAna3 scaffold_12586:53077-53142 + AC------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCATCGACGAAGAGCTG----GCGGTGTTCACAAA-CCAAAAGGGTTGTTCAAACATAACCCAGCA
droBip1 scf7180000395234:12867-13127 + GG------------------------------------CAAGAACCGCATTCGGTGAAAAGACAAAGACCCTGAAACTGCTGGTGATGCCAGGCATGGAGGACAGTCTGGTGCTAGGATAGGATTTCCTCATTACGATACCAAAAAGGAAGAGATGGGGTGGCTGTCTGGAGGATAAACTGTCCATAGCAGTGGCCGGATGTCCAGAG--------AAATGCCAAGAGA-AACGCGAT--------AAGATGTTCATTGAGAGAGACCTG----GAAGCGTTGGCAGG-CCAAAGGGGCTGCTGGAACATTACGCAGCC
droKik1 scf7180000300851:27368-27572 - AG-----------------------------------------------------------AAAATCCAGGTGCCCCTCTTCGTCATGCCGGCCATGTTGGAACCCCTGATCCTGGGCATGGATTTCCTGGCCACGATCGGCACCACCATCCTCGAAGC----------------------T-----CA--------------GGAGCCCGCCAACGAGGAACAAGACC-CTCGCATC--------AAAGCGTTCTTATACGAGCAGCTG----GTCCAGTTCGAGGGAATG-ACAGGAGTGGCCAACATCGCCGAGCA
droFic1 scf7180000453107:1597-1723 - CA-T----------------------------AG----CCAGGATCACACTAGTACAGGATCTCCTCGAGGTGCCATTACTTGTCATGCCATCCATGCTGGAACCCTTGATTTTAGGATTAGACTTCCTGGGTAGTATAGGAACGACGCTGCGCTGCGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490682:17725-17852 - CA-T----------------------------AG----CCCGGATCATGCTAGTACAGGACCTCCTCGAGGTGCCGCTACTAGTCATGCCATCCATGCTGGAACCTTTGATTTTAGGATTAGACTTTCTTAAAAATATAGGCACGACACTGCGCTGCGGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000759682:2767-3033 + CGATCGGTCATGTCTGAATGTGACGAAATTGTGGCGAACCCCGGTCACGTTGGCGGGCACCACAGTACTCTTACCCATGTTGGTGATGCCCACCATGTTGGACCGAGTGATACTTGGGATGGATTTCCTCAAAGCAGCCGGGACGCGCGTGCGATGTGGGCAGGCCACC-----------CTCGAATTG--------------CGATCCGAACCCCAAGCAAAAGGGCATCCTTTGTT--------AAGGC-TTCCTCGAACGAGAGTTA----GCTTTGTTCGAGAG--------------TCTCAGATCGCTGAGCA
droBia1 scf7180000301393:102556-102593 + TA-T----------------------------GG-------GAGCTA-----------------------------------------TATGTTATA-------------------------------------------------------------G---------------------------TCG-----TCCGATT---------------------------------------------------------------------------------------------------------------TTGATAA
droTak1 scf7180000415973:18937-19082 - GGGT----------------------------AG----TAACCATCCACCTGGGTCTCCAACAAGTACAGCTGCTCCTGCTAGTGATGCCCACGGTACTAGATGATCTCCTGCTAGGAATCGATTTCCTTTGCGGCATCAAGGCCATTATTAGCTGCGGAGGAGAATTA-----------TTACAACTG----------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409639:16917-16963 - C----------------------------------------------------------------------------------------------------------------TGGGGATGGACTTCTTGGCAAAAGTAGGAACGACAATACGATGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrUextra:5637022-5637032 - TT-------------------------------A----CCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATA
droYak3 v2_chrUn_5416:17503-17579 - C----------------------------------------------------------------------------------------------------------TCCTGCTAGGAATGGATTTCCTTTGTGGCATTAGGGCCACCATCAGCTGCGGAGGAGAACTT-----------TTACAATTG--------------AA---------------------------------------------------------------------------------------------------------------CCC
droEre2 scaffold_4845:1260800-1260900 - T-----------------------------------------------------------------------------GCTAGTGATGCCTGCTATACTGGACCATCTCCTGATAAGGATGGGTTTCCTTTGTGGCATTAAGGCCACCACCAGCTGCGAAGGAGAACTA-----------TTGCAACTG----------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CAAT----------------------------GG----CAAGCATCGGTCTCGGGGCACAGACCGTACATATGACATTGTTAGCGATGCCATCGATGATGGTCCCTCTTATTCTGGGAGTGGATTTCCTTCGAAACATAGGAACTTCTATACGTTGTGGAGGTTATATG-----------TTACAGTTG-----CCCCCTTTCGATAA-------------GCCCCACA-GTCCCATCAATTCTACAA----TTCATCCATCGCTAGTGGCGGATGACCACACGCAGC-CTA-ATGCGTCTTACCCAAATAGCACAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................ACCGTACATATGACATTGTTAGCGA.........................................................................................................................................................................................................................................25200.45908010
...............................................................................................................................CTTCGAAACATAGGAACTTCTAT.........................................................................................................................................................................2330.33101000
............................................................................................................TATTCTGGGAGTGGATTTCCTTCGAAAC.......................................................................................................................................................................................2830.33101000
...........................................................................ATTGTTAGCGATGCCATCGATGA.............................................................................................................................................................................................................................23200.25505000
........................................................................GACATTGTTAGCGATGCCATCGATGA.............................................................................................................................................................................................................................26200.05101000
...........................................................AGACCGTACATATGACATTGTTAGCGA.........................................................................................................................................................................................................................................27200.05101000
...............................................................CGTACATATGACATTGTTAGCGA.........................................................................................................................................................................................................................................23200.05101000
.................................................................TACATATGACATTGTTAGCGATGCCA....................................................................................................................................................................................................................................26200.05101000
............................................................................TTGTTAGCGATGCCATCGATGATG...........................................................................................................................................................................................................................24200.05100010
..........................................................................................................................................AGGAACTTCTATACGTTGTGGAGGT............................................................................................................................................................25200.05100010
.............................................................................................................................................AACTTCTATACGTTGTGGAGG.............................................................................................................................................................21200.05101000
droVir3
GT-------------------------------------AGACGTCAGCTTAGGGGAAAAAACGATCAGCATGACGATGCTCATCATGCCCTCAATGTTGGACCACGTAATCCTGGGTATGGATTTCTTGGGTGCAATGGGCACTACAATACGCTGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................AAAACGATCAGCATGACGATGCTCA............................................................................................................................................................................................................................................252012.402480020300290100010000000900017052022070130340101713000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCAT...........................................................................................................................................................................................................................................262010.55211004350202080300000001003110403260010001824151212000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTC.............................................................................................................................................................................................................................................24206.6513311200001000000000000001001488017962105425019000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATC..........................................................................................................................................................................................................................................27205.9511900100841000000000000000050924160040921112400000000000000000000000000
..........................................................AAAACGATCAGCATGACGATG................................................................................................................................................................................................................................................21204.35870030830413830010000001007016302451002019200000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATCA.........................................................................................................................................................................................................................................28204.308600200000000000000000000000370092660015224100000000000000000000000
..........................................................AAAACGATCAGCATGACGATGC...............................................................................................................................................................................................................................................22203.0060004011100300030000000000000131050100300330000000000000000000000000
..........................................................AAAACGATCAGCATGACG...................................................................................................................................................................................................................................................18201.95393000300014000000000000010404500100001020100000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGGGTGC........................................................................................................................................................................................24161.75280000700000103000000000000000000000010106000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCT..............................................................................................................................................................................................................................................23201.7034000160300200000000000003025300020012013000000000000000000000000
.........................................................................................................CGTAATCCTGGGTATGGATTTCTTGG............................................................................................................................................................................................26151.33200012000000000000000000000040000000040000000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATGTTGG..........................................................................................................................................................................................................................2551.206005000000000000000000000001000000000000000000000000000000000000
.........................................................................................................CGTAATCCTGGGTATGGATTTCTTGGG...........................................................................................................................................................................................27151.1317007000001000000000000000040001000040000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGG............................................................................................................................................................................................20161.06170000200002110000000001000000000000000100000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGGGTG.........................................................................................................................................................................................23160.9415000040000010000000000000000300000000007000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGAT...................................................................................................................................................................................................24200.7515000000000000000000000002303120002001100000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCT............................................................................................................................................................................................................................................25200.7014000001000000000000000000401000010000006100000000000000000000000
..........................................................AAAACGATCAGCATGACGAT.................................................................................................................................................................................................................................................20200.7014000000402000000000001000001010010030001000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTTT............................................................................................................................................................................................................................................25200.6513001000100000000000000003001200000002102000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGGGTGC........................................................................................................................................................................................22190.6312002010002010040000000000000100000000100000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATT..........................................................................................................................................................................................................................................27200.6012001000200000000000000001013000011001100000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGA....................................................................................................................................................................................................23200.6012000000000000000000000000207000000002100000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATA..........................................................................................................................................................................................................................................27200.6012000000000000000000000001002102000002004000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTT.............................................................................................................................................................................................................................................24200.5010000000200000000000000000002400010000001000000000000000000000000
.T-------------------------------------AGACGTCAGCTTAGGGGAAAAAACGA..............................................................................................................................................................................................................................................................2760.503000000000000000000000000000000000000000000000000000000000000003
..........................................................AAAACGATCAGCATGACGA..................................................................................................................................................................................................................................................19200.5010000010000000000000000001040000110010100000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGGG...........................................................................................................................................................................................21160.447000000100020000000000000000100000000102000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATGTTG...........................................................................................................................................................................................................................2450.402001000000000000000000000001000000000000000000000000000000000000
.............................................................................TGCTCATCATGCCCTCAATGTTGGACC.......................................................................................................................................................................................................................2750.402001000000000000000000000000000000010000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGGGTGCAA......................................................................................................................................................................................26160.386000010000000000000000000000100000100003000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATCAT........................................................................................................................................................................................................................................29200.357000000000000000000000000002400000010000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCC............................................................................................................................................................................................................................................25200.357001040000000000000000000000001010000000000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATGTTA...........................................................................................................................................................................................................................2460.332001000000000000000000000000000001000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCAA...........................................................................................................................................................................................................................................26200.306000000300000000000000001000000000002000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGG.....................................................................................................................................................................................................22200.306000000000000000000000000301010001000000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATG......................................................................................................................................................................................................21200.306000000000000000000000000300000000001020000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGAA...................................................................................................................................................................................................24200.306000000000000000000000002003000000000100000000000000000000000000
............................................................................................................................TTCTTGGGTGCAATGGGCA................................................................................................................................................................................19200.255000000001000000000000000000000000000000000000000000000000000004
.........................................................................................................CGTAATCCTGGGTATGGATTTCTTG.............................................................................................................................................................................................25180.224002000000000000000000000010000000010000000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGGGTG.........................................................................................................................................................................................21190.214001000100100010000000000000000000000000000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATGTTGGACCA......................................................................................................................................................................................................................2950.201000000000000000000000000001000000000000000000000000000000000000
.........................................................................ACGATGCTCATCATGCCCTCAATGT.............................................................................................................................................................................................................................2550.201000000000000000000000000001000000000000000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATG..............................................................................................................................................................................................................................21200.204000000000000000000000000201000000000100000000000000000000000000
...........................................................AAACGATCAGCATGACGATGCTCA............................................................................................................................................................................................................................................24200.204003000000000000000000000000100000000000000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATGT.............................................................................................................................................................................................................................2250.201000000000000000000000000001000000000000000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATGTT............................................................................................................................................................................................................................2350.201000000000000000000000000000000000000010000000000000000000000000
.............................................................................TGCTCATCATGCCCTCAATGTTG...........................................................................................................................................................................................................................2350.201000000000000000000000000010000000000000000000000000000000000000
.......................................................................TGACGATGCTCATCATGCCCTCAATGT.............................................................................................................................................................................................................................2750.201000000000000000000000000000000000000100000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATGTTGGACA.......................................................................................................................................................................................................................2850.201000000000000000000000000001000000000000000000000000000000000000
.............................................................................TGCTCATCATGCCCTCAATGTTGG..........................................................................................................................................................................................................................2450.201000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGGGT..........................................................................................................................................................................................22160.193000020000000000000000000000100000000000000000000000000000000000
................................................................................................................CTGGGTATGGATTTCTTGGGTGC........................................................................................................................................................................................23170.183000000002000000000000000000000000000001000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGGGT..........................................................................................................................................................................................20190.163000000001010000000000001000000000000000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTG.............................................................................................................................................................................................19190.163000000000000000000000000000200000000100000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTAT.......................................................................................................................................................................................................20200.153000000000000000000000000000000000002010000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATAT.........................................................................................................................................................................................................................................28200.153001000000000000000000000000100000010000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATTT.........................................................................................................................................................................................................................................28200.153000000000000000000000000101000000000010000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGATC..................................................................................................................................................................................................25200.153000000000000000000000001000020000000000000000000000000000000000
...........................................................AAACGATCAGCATGACGATGCTCATC..........................................................................................................................................................................................................................................26200.153003000000000000000000000000000000000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCAG...........................................................................................................................................................................................................................................26200.153000010100000000000000000000000000000100000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGAAA..................................................................................................................................................................................................25200.153000000000000000000000000001000000002000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGGGTGCAATG....................................................................................................................................................................................28140.142000000000000000000000000000000000000101000000000000000000000000
..........................................................................................CTCAATGTTGGACCACGTAATCCTGGGTA........................................................................................................................................................................................................29140.142000000000000000000000000000000000000000000000000000001000010000
.........................................................................................CCTCAATGTTGGACCACGTAATCCTGGGTA........................................................................................................................................................................................................30140.142000000000000000000000000000000000000000000000000000000000200000
.............................................................................................................ATCCTGGGTATGGATTTCTTGG............................................................................................................................................................................................22150.132002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TCCTGGGTATGGATTTCTTGGGTGC........................................................................................................................................................................................25160.132000000000000000000000000000000001000001000000000000000000000000
........................................................AAAAAACGATCAGCATGACGAT.................................................................................................................................................................................................................................................2280.131000000000000000000000000000000000000000000000000000000000010000
.................................................................................................................TGGGTATGGATTTCTTGGGTGCAATGG...................................................................................................................................................................................27170.122000000000000000000000000002000000000000000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGGGTGCA.......................................................................................................................................................................................23190.112000000000010000000000000001000000000000000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGG............................................................................................................................................................................................18190.112000000100000000000000000000000000001000000000000000000000000000
.........................................................................................................CGTAATCCTGGGTATGGAT...................................................................................................................................................................................................19200.102000000000000000000000001010000000000000000000000000000000000000
...................................................................................................GGACCACGTAATCCTGGGTATGGATT..................................................................................................................................................................................................26200.102001000000000000000000000100000000000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCTA...........................................................................................................................................................................................................................................26200.102000000000000000000000000002000000000000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTA........................................................................................................................................................................................................19200.102000000000000000000000000101000000000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGT..................................................................................................................................................................................................................................................19200.102000000100000000000000000000000000000001000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCAGT..........................................................................................................................................................................................................................................27200.102000000000000000000000000000000000000020000000000000000000000000
...........................................................AAACGATCAGCATGACGATGC...............................................................................................................................................................................................................................................21200.102000010000000000000001000000000000000000000000000000000000000000
.........................................................................................................CGTAATCCTGGGTATGGATTTC................................................................................................................................................................................................22200.102000000000000000000000000020000000000000000000000000000000000000
...........................................................AAACGATCAGCATGACGATGCTC.............................................................................................................................................................................................................................................23200.102000010000000000000000000100000000000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATGT.........................................................................................................................................................................................................................................28200.102000100000000000000000000000000000010000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGATT..................................................................................................................................................................................................25200.102000000000000000000000000002000000000000000000000000000000000000
................................................................ATCAGCATGACGATGCTCATCATGC......................................................................................................................................................................................................................................25200.102002000000000000000000000000000000000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTA.............................................................................................................................................................................................................................................24200.102000000200000000000000000000000000000000000000000000000000000000
.............................................CAGCTTAGGGGAAAAAACGATCAGCA........................................................................................................................................................................................................................................................26100.101000000000000000000000000000000000000000000000000100000000000000
............................................................AACGATCAGCATGACGATGCTCAT...........................................................................................................................................................................................................................................24200.102001000000000000000000000000000000000010000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGGGA..........................................................................................................................................................................................20200.102000000000020000000000000000000000000000000000000000000000000000
................................................................ATCAGCATGACGATGCTCATCATG.......................................................................................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
...............................................GCTTAGGGGAAAAAACGATCAGC.........................................................................................................................................................................................................................................................23100.101000000000000000000000000001000000000000000000000000000000000000
...............................................................................CTCATCATGCCCTCAATGTTGGACCA......................................................................................................................................................................................................................26100.101001000000000000000000000000000000000000000000000000000000000000
.........................................................AAAAACGATCAGCATGACGATGCTCA............................................................................................................................................................................................................................................26200.102000000000000000000000001000000000000100000000000000000000000000
........................................................................................CCCTCAATGTTGGACCACGTAATCCTGGGTATGGA....................................................................................................................................................................................................35130.081000000000000000000000000000000000000000000000000000000000100000
..................................................................................ATCATGCCCTCAATGTTGGACCACGT...................................................................................................................................................................................................................26140.071001000000000000000000000000000000000000000000000000000000000000
...........................................................................................TCAATGTTGGACCACGTAATCCTGGGTA........................................................................................................................................................................................................28140.071000100000000000000000000000000000000000000000000000000000000000
.........................................................................................CCTCAATGTTGGACCACGTAATCCTGGG..........................................................................................................................................................................................................28150.071001000000000000000000000000000000000000000000000000000000000000
...........................................................................................TCAATGTTGGACCACGTAATCCT.............................................................................................................................................................................................................23150.071000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................ATCCTGGGTATGGATTTCTTGGGT..........................................................................................................................................................................................24150.071000000100000000000000000000000000000000000000000000000000000000
.........................................................................................................CGTAATCCTGGGTATGGATTTCTTGGGT..........................................................................................................................................................................................28150.071000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................GTAATCCTGGGTATGGATTTCTTGGGT..........................................................................................................................................................................................27150.071001000000000000000000000000000000000000000000000000000000000000
...........................................................................................TCAATGTTGGACCACGTAATCCTT............................................................................................................................................................................................................24150.071000000000000000000000000010000000000000000000000000000000000000
......................................................................................TGCCCTCAATGTTGGACCACGTAAA................................................................................................................................................................................................................25150.071000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................CGTAATCCTGGGTATGGATTTCTTGGGA..........................................................................................................................................................................................28150.071001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGGGTTG........................................................................................................................................................................................24160.061000000000000000000000000000100000000000000000000000000000000000
.....................................................................................ATGCCCTCAATGTTGGACCA......................................................................................................................................................................................................................20160.061000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGGGTGCA.......................................................................................................................................................................................25160.061000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................TCCTGGGTATGGATTTCTTGGGT..........................................................................................................................................................................................23160.061000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................TTCTTGGGTGCAATGGGCACTACAAT.........................................................................................................................................................................26160.061000000000000000000000000000000000000000000000000000000000000001
..............................................................................................................TCCTGGGTATGGATTTCTTGGGTG.........................................................................................................................................................................................24160.061000000000000000000000000000000000000001000000000000000000000000
...................................................................................TCATGCCCTCAATGTTGG..........................................................................................................................................................................................................................18160.061001000000000000000000000000000000000000000000000000000000000000
.........................................................................................CCTCAATGTTGGACCACGTAATC...............................................................................................................................................................................................................23160.061001000000000000000000000000000000000000000000000000000000000000
......................................................................................TGCCCTCAATGTTGGACC.......................................................................................................................................................................................................................18170.061000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGGGTGCAATG....................................................................................................................................................................................26170.061000000000000000000000000010000000000000000000000000000000000000
................................................................................................................CTGGGTATGGATTTCTTGG............................................................................................................................................................................................19170.061000000000000000000000000000000000000001000000000000000000000000
................................................................................................GTTGGACCACGTAATCCTGGGTATGG.....................................................................................................................................................................................................26180.061000000000000000000000000000000000000100000000000000000000000000
...............................................................................................TGTTGGACCACGTAATCCTGGGTATGGA....................................................................................................................................................................................................28180.061000000000000000000000000001000000000000000000000000000000000000
.................................................................................................TTGGACCACGTAATCCTGGGTATGGATC..................................................................................................................................................................................................28180.061000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................ATGGATTTCTTGGGTGCAATGGGC.................................................................................................................................................................................24180.061000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................ATCCTGGGTATGGATTTCTTG.............................................................................................................................................................................................21180.061000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGC............................................................................................................................................................................................20190.051000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................CCTGGGTATGGATTTCTTGTC...........................................................................................................................................................................................21190.051000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGGGTGCAATC....................................................................................................................................................................................26190.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGATTTG................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................GTAATCCTGGGTATGGATT..................................................................................................................................................................................................19200.051000000000010000000000000000000000000000000000000000000000000000
..................................................................CAGCATGACGATGCTCATCATT.......................................................................................................................................................................................................................................22200.051000000000000000000000000000000000001000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATC................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................................................CTCAATGTTGGACCA......................................................................................................................................................................................................................15200.051000000000000000000000000000000000000000000000000000000000100000
................................................................ATCAGCATGACGATGCTCATCAT........................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
................................................................ATCAGCATGACGATGCTCATC..........................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................TCTTGGGTGCAATGGGCACTA.............................................................................................................................................................................21200.051000000000000000000000000000000001000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCAC...........................................................................................................................................................................................................................................26200.051000100000000000000000000000000000000000000000000000000000000000
...................................................................................................GGACCACGTAATCCTGGGTATGGA....................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCATGTA........................................................................................................................................................................................................................................29200.051000000000000000000000000000100000000000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGATTT.................................................................................................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGT.........................................................................................................................................................................................................18200.051000000000000000000100000000000000000000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGATTG.................................................................................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAATT..............................................................................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................GTAATCCTGGGTATGGATTTC................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................AAACGATCAGCATGACGATGCTCAT...........................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................GGCACTACAATACGCTGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------20200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATGGT....................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
...................................................................................................GGACCACGTAATCCTGGGTATGG.....................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................GGCACTACAATACGCTGCG.................................................................................................................................................................19200.051000000000000000000000000000000000000010000000000000000000000000
.........................................................AAAAACGATCAGCATGACGAT.................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................TGGGTATGGATTTCTTGGGTGTTT......................................................................................................................................................................................24200.051000000000000010000000000000000000000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCTAT..........................................................................................................................................................................................................................................27200.051000000000000000000000000000000000001000000000000000000000000000
.................................................................TCAGCATGACGATGCTCATCATGCCCTC..................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................TGGACCACGTAATCCTGGGTATGGAT...................................................................................................................................................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................AAACGATCAGCATGACGA..................................................................................................................................................................................................................................................18200.051000000000000000000000000010000000000000000000000000000000000000
...................................................................................................GGACCACGTAATCCTGGGTATG......................................................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
.................................................................TCAGCATGACGATGCTCATCATGCCCT...................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................AAAACGATCAGCATGACGATGCTCG............................................................................................................................................................................................................................................25200.051000000000000000000000001000000000000000000000000000000000000000
...........................................................AAACGATCAGCATGACGATG................................................................................................................................................................................................................................................20200.051000000000000000000000001000000000000000000000000000000000000000
............................................................AACGATCAGCATGACGATGCTC.............................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000001000000000000000000000000
...............................................................................................TGTTGGACCACGTAATCCTGGG..........................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TCTTGGGTGCAATGGGCA................................................................................................................................................................................18200.051000000000010000000000000000000000000000000000000000000000000000
............................................................................ATGCTCATCATGCCCTCAA................................................................................................................................................................................................................................19200.051000000000000000000000000000000001000000000000000000000000000000
.........................................................AAAAACGATCAGCATGACGATG................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................................GACCACGTAATCCTGGGTATTA.....................................................................................................................................................................................................22200.051000000000000000000000000000000001000000000000000000000000000000
...................................................................................................GGACCACGTAATCCTGGGTAT.......................................................................................................................................................................................................21200.051000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................TTGGGTGCAATGGGCACT..............................................................................................................................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
GG------------------------------------CGACGATCAGCCTGGGGAATCAGCAAATACAGATTCCGTTGCTGATTCTGCCAGGGGTGATCGAAGATCTAGTGCTGGGCTGGGATTTCTTGGCCAGCATGGGCACCACACTGGAGTGCGGTGGCTTGACA-----------TTGAAG-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGG...................................................................................................................................................................................23203.05615910010
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGGCAC...............................................................................................................................................................................27202.805623100320
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGG..................................................................................................................................................................................24201.85373700000
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGGC.................................................................................................................................................................................25200.75150100140
.............................................................CAAATACAGATTCCGTTGCTGATTC.........................................................................................................................................................................................................................................25200.7014610070
.....................................................................................................................CTGGGATTTCTTGGCCAGCATG....................................................................................................................................................................................22200.65131300000
.............................................................CAAATACAGATTCCGTTGCTGATT..........................................................................................................................................................................................................................................24200.65133000100
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGGCA................................................................................................................................................................................26200.459900000
.............................................................CAAATACAGATTCCGTTGCTGATTCT........................................................................................................................................................................................................................................26200.255500000
......................................................................................................................TGGGATTTCTTGGCCAGCATGGG..................................................................................................................................................................................23200.204400000
......................................................................................................................TGGGATTTCTTGGCCAGCATGG...................................................................................................................................................................................22200.204400000
.....................................................................................................................CTGGGATTTCTTGGCCAGCA......................................................................................................................................................................................20200.153010020
..............................................................AAATACAGATTCCGTTGCTGATTC.........................................................................................................................................................................................................................................24200.153300000
...............................................................AATACAGATTCCGTTGCTGATTCT........................................................................................................................................................................................................................................24200.153300000
......................................................................................................................TGGGATTTCTTGGCCAGCATGGGC.................................................................................................................................................................................24200.153200010
......................................................................................................................TGGGATTTCTTGGCCAGCATGGGCA................................................................................................................................................................................25200.153300000
.............................................................CAAATACAGATTCCGTTGCTGA............................................................................................................................................................................................................................................22200.153300000
.......................................................................................................................GGGATTTCTTGGCCAGCATGGGCACC..............................................................................................................................................................................26200.153000030
..................................................................................................TCGAAGATCTAGTGCTGGG..........................................................................................................................................................................................................19200.102200000
.......................................................................................................................GGGATTTCTTGGCCAGCATGGGCAC...............................................................................................................................................................................25200.102020000
.............................................................CAAATACAGATTCCGTTGCTG.............................................................................................................................................................................................................................................21200.102200000
........................................................................................................................GGATTTCTTGGCCAGCATGGGCAC...............................................................................................................................................................................24200.102000020
.......................................................................................................................GGGATTTCTTGGCCAGCATGGGC.................................................................................................................................................................................23200.102000020
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGGCAT...............................................................................................................................................................................27200.102200000
..................................................................................................TCGAAGATCTAGTGCTGGGCTGGGA....................................................................................................................................................................................................25200.102100010
.............................................................CAAATACAGATTCCGTTGCTGATTCTC.......................................................................................................................................................................................................................................27200.102200000
.......................................................................................................................GGGATTTCTTGGCCAGCATGGGCA................................................................................................................................................................................24200.102200000
.............................................................CAAATACAGATTCCGTTGCTGAT...........................................................................................................................................................................................................................................23200.102100010
...............................................................................................TGATCGAAGATCTAGTGCTGGGCTGGG.....................................................................................................................................................................................................27190.051000010
...............................................................................................................................................CCACACTGGAGTGCGGTGG.............................................................................................................................................................19200.051100000
..........................................................................................................................ATTTCTTGGCCAGCATGGGCACCAC............................................................................................................................................................................25200.051000010
......................................................................................................................TGGGATTTCTTGGCCAGCATGGGCTT...............................................................................................................................................................................26200.051100000
...............................................................AATACAGATTCCGTTGCTGATTCTGC......................................................................................................................................................................................................................................26200.051100000
.......................................................................................................................GGGATTTCTTGGCCAGCATG....................................................................................................................................................................................20200.051100000
..............................................................AAATACAGATTCCGTTGCTGA............................................................................................................................................................................................................................................21200.051100000
................................................................................................................................TGGCCAGCATGGGCACCACAC..........................................................................................................................................................................21200.051100000
........................................ACGATCAGCCTGGGGAATCAG..................................................................................................................................................................................................................................................................21200.051100000
.................................................................................................ATCGAAGATCTAGTGCTGGGC.........................................................................................................................................................................................................21200.051100000
............................................................................................................................TTCTTGGCCAGCATGGGC.................................................................................................................................................................................18200.051000010
.......................................................................................................................GGGATTTCTTGGCCAGCATGGGCACCA.............................................................................................................................................................................27200.051100000
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGGCATA..............................................................................................................................................................................28200.051100000
.....................................................................................................................CTGGGATTTCTTGGCCAGC.......................................................................................................................................................................................19200.051100000
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGGCAA...............................................................................................................................................................................27200.051000010
.....................................................................................................................CTGGGATTTCTTGGCCAGCATA....................................................................................................................................................................................22200.051100000
..................................................................................................TCGAAGATCTAGTGCTGGGC.........................................................................................................................................................................................................20200.051000010
...............................................................................................TGATCGAAGATCTAGTGCTGGG..........................................................................................................................................................................................................22200.051100000
..................................................................................................TCGAAGATCTAGTGCTGGGCTGGGAT...................................................................................................................................................................................................26200.051100000
.............................................................................................................................TCTTGGCCAGCATGGGCACCAC............................................................................................................................................................................22200.051000010
..................................................................................................TCGAAGATCTAGTGCTGGGCTGGGATT..................................................................................................................................................................................................27200.051100000
.................................................................................................................................................ACACTGGAGTGCGGTGGC............................................................................................................................................................18200.051100000
......................................................................................................................TGGGATTTCTTGGCCAGCATGGGCACCA.............................................................................................................................................................................28200.051000010
.....................................................................................................................................AGCATGGGCACCACACTGGAGTGC..................................................................................................................................................................24200.051010000
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGGCACC..............................................................................................................................................................................28200.051100000
.........................................................................................................................GATTTCTTGGCCAGCATGGGCACC..............................................................................................................................................................................24200.051000010
.G------------------------------------CGACGATCAGCCTGGGG........................................................................................................................................................................................................................................................................18200.051100000
.....................................................................................................................CTGGGATTTCTTGGCCAGCATGGT..................................................................................................................................................................................24200.051100000
..............................................................................................................................CTTGGCCAGCATGGGCACCAC............................................................................................................................................................................21200.051000010
droGri2
CC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTATAACTGAGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TA-------------------------------G----CGCGCTTCAAACTAGACGAACAAGAGGTACGGATGCCACTCCTGGTACTACCCAATATGGTAGAGCAAGCCATCATAGGGATGGATTTCCTGTGCGCCATTGAAACCACAATACAATGTGGCGCCACACGC-----------CTCCATCTC--------------CAAGG-------------CCCCCAAC-GCCCC---------------------------------------------------------------------------------ATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................TAGACGAACAAGAGGTACGGATGCCAC..................................................................................................................................................................................................................................................2718.0080100000340
.............................................................GAGGTACGGATGCCACTCCTGG............................................................................................................................................................................................................................................2213.0030300000000
.............................................................GAGGTACGGATGCCACTCCTGGTAC.........................................................................................................................................................................................................................................2513.0030300000000
............................................TCAAACTAGACGAACAAGAGGTACGGA........................................................................................................................................................................................................................................................2713.0030000000030
............................................TCAAACTAGACGAACAAGAGGTACGG.........................................................................................................................................................................................................................................................2613.0030000000300
...............................................AACTAGACGAACAAGAGGTACGGA........................................................................................................................................................................................................................................................2412.0020000000200
..................................................TAGACGAACAAGAGGTACGGA........................................................................................................................................................................................................................................................2112.0020100001000
...............................................AACTAGACGAACAAGAGGTACGGAT.......................................................................................................................................................................................................................................................2512.0020000000200
................................................ACTAGACGAACAAGAGGTACGGA........................................................................................................................................................................................................................................................2311.0010000000010
..................................................TAGACGAACAAGAGGTACGGATGCCACC.................................................................................................................................................................................................................................................2811.0010000000010
.................................................................TACGGATGCCACTCCTGGTACTACCC....................................................................................................................................................................................................................................2611.0010100000000
.............................................................GAGGTACGGATGCCACTCCTGGTA..........................................................................................................................................................................................................................................2411.0010100000000
..............................................................AGGTACGGATGCCACTCCTGG............................................................................................................................................................................................................................................2111.0010100000000
..................................................TAGACGAACAAGAGGTACGGATGC.....................................................................................................................................................................................................................................................2411.0010000000010
...........................................TTCAAACTAGACGAACAAGAGGTACGGA........................................................................................................................................................................................................................................................2811.0010000000010
..........................................CTTCAAACTAGACGAACAAGAGGT.............................................................................................................................................................................................................................................................2411.0010100000000
.................................................................TACGGATGCCACTCCTGGTACTACC.....................................................................................................................................................................................................................................2511.0010010000000
.............................................................GAGGTACGGATGCCACTCCTGGT...........................................................................................................................................................................................................................................2311.0010100000000
.................................................................TACGGATGCCACTCCTGGTACTACCCAA..................................................................................................................................................................................................................................2811.0010100000000
.......................................................GAACAAGAGGTACGGATGCCACTCCTGG............................................................................................................................................................................................................................................2811.0010100000000
.....................................................................................................................................GCCATTGAAACCACAATACAATGTGG................................................................................................................................................................2670.5740310000000
.....................................................................................................................................GCCATTGAAACCACAATACAATGTG.................................................................................................................................................................2580.5040400000000
......................................................................................TACCCAATATGGTAGAGCAAGCCATCA..............................................................................................................................................................................................................2720.5010000000010
.....................................................................................................................................GCCATTGAAACCACAATACAATG...................................................................................................................................................................23100.4040400000000
...............................................................................................TGGTAGAGCAAGCCATCATAGGGAA.......................................................................................................................................................................................................2530.3310100000000
.............................................................................TCCTGGTACTACCCAATATGGTAGAGC.......................................................................................................................................................................................................................2730.3310100000000
..............................................................................CCTGGTACTACCCAATATGGTAGAGC.......................................................................................................................................................................................................................2630.3310100000000
...............................................................................................TGGTAGAGCAAGCCATCATAGGGA........................................................................................................................................................................................................2430.3310100000000
...............................................................................................TGGTAGAGCAAGCCATCATAGG..........................................................................................................................................................................................................2240.2510100000000
..................................................................................................................................................................CACACGC-----------CTCCATCTC--------------CAAGG-------------CC................................................................................................2340.2510100000000
................................................................................................................................................................GCCACACGC-----------CTCCATCTC--------------CAAGG-------------CCCC..............................................................................................2740.2510001000000
.......................................................................TGCCACTCCTGGTACTACCCAATA................................................................................................................................................................................................................................2450.2010100000000
...........................................................................ACTCCTGGTACTACCCAATATGG.............................................................................................................................................................................................................................2350.2010100000000
.......................................................................TGCCACTCCTGGTACTACCCAATATG..............................................................................................................................................................................................................................2650.2010100000000
..............................................................................CCTGGTACTACCCAATATGGTAGA.........................................................................................................................................................................................................................2450.2010100000000
...............................................................................................................................................................CGCCACACGC-----------CTCCATCTC--------------CAAGG-------------C.................................................................................................2560.1710100000000
.....................................................................................................................................................................................TCCATCTC--------------CAAGG-------------CCCCCAAC-GC.......................................................................................2370.1410010000000
.....................................................................................................................................GCCATTGAAACCACAATACAATGTGGC...............................................................................................................................................................2770.1410100000000
.....................................................................................................................................................................................TCCATCTC--------------CAAGG-------------CCCCCAAC-GCCC.....................................................................................2570.1410100000000
..................................................................................................TAGAGCAAGCCATCATAGGGATG......................................................................................................................................................................................................23150.1320200000000
.....................................................................................................................................GCCATTGAAACCACAATACAATGT..................................................................................................................................................................2480.1310100000000
.............................................................................................................................TCCTGTGCGCCATTGAAACCA.............................................................................................................................................................................21100.1010100000000
......................................................................................................................................CCATTGAAACCACAATACAATGTG.................................................................................................................................................................24120.0810100000000
......................................................................................................................................CCATTGAAACCACAATACAATGT..................................................................................................................................................................23120.0810100000000
..........................................................................................................................................TGAAACCACAATACAATGT..................................................................................................................................................................19130.0810100000000
......................................................................................................................................CCATTGAAACCACAATACAATG...................................................................................................................................................................22140.0710100000000
..................................................................................................TAGAGCAAGCCATCATAGGGATT......................................................................................................................................................................................................23150.0710100000000
..................................................................................................TAGAGCAAGCCATCATAGGGATGG.....................................................................................................................................................................................................24150.0710000001000
..................................................................................................TAGAGCAAGCCATCATAGGG.........................................................................................................................................................................................................20180.0610000001000
droPer2
TA-------------------------------G----CGCGCGTCAAACTAGACGAACAAGAGGTACAGATGCCACTCCTGGAACTACCCAATATGGTAGAGCAAGCCATCATAGGGATGGATTTCCTGTTCGCTATTGAAACCACAATACAATGTGGCGCCACACGC-----------CTCCATCTC--------------CAAGG-------------CCCCCAAC-GCCCC---------------------------------------------------------------------------------ATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................GAGGTACAGATGCCACTCCTGG............................................................................................................................................................................................................................................22120.172020000
..............................................AAACTAGACGAACAAGAGGT.............................................................................................................................................................................................................................................................20150.132000002
......................................................................................TACCCAATATGGTAGAGCA......................................................................................................................................................................................................................19100.101010000
..................................................TAGACGAACAAGAGGTACAGATGC.....................................................................................................................................................................................................................................................24120.081001000
.............................................CAAACTAGACGAACAAGAGGT.............................................................................................................................................................................................................................................................21150.071010000
...............................................................................................TGGTAGAGCAAGCCATCATAGGGA........................................................................................................................................................................................................24160.061010000
..................................................................................................TAGAGCAAGCCATCATAGGGA........................................................................................................................................................................................................21200.051000001
................................................................................................................ATAGGGATGGATTTCCTGT............................................................................................................................................................................................19200.051000100
............................................................................................................CATCATAGGGATGGATTTCCT..............................................................................................................................................................................................21200.051000100
............................................................................................................CATCATAGGGATGGATTTCCTG.............................................................................................................................................................................................22200.051100000
.............................................................................................................ATCATAGGGATGGATTTCCTG.............................................................................................................................................................................................21200.051000001
..............................................................................................................TCATAGGGATGGATTTCCTGT............................................................................................................................................................................................21200.051010000
droAna3
AC------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCATCGACGAAGAGCTG----GCGGTGTTCACAAA-CCAAAAGGGTTGTTCAAACATAACCCAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................GTTCATCGACGAAGAGCTG----GCGG.........................................2320.501100000
......................................................................................................................................................................................................................................................................AAGAGCTG----GCGGTGTTCACAAA-CC............................2460.171100000
droBip1
GG------------------------------------CAAGAACCGCATTCGGTGAAAAGACAAAGACCCTGAAACTGCTGGTGATGCCAGGCATGGAGGACAGTCTGGTGCTAGGATAGGATTTCCTCATTACGATACCAAAAAGGAAGAGATGGGGTGGCTGTCTGGAGGATAAACTGTCCATAGCAGTGGCCGGATGTCCAGAG--------AAATGCCAAGAGA-AACGCGAT--------AAGATGTTCATTGAGAGAGACCTG----GAAGCGTTGGCAGG-CCAAAGGGGCTGCTGGAACATTACGCAGCCSizeHit CountTotal NormTotal
No Reads
droKik1
AG-----------------------------------------------------------AAAATCCAGGTGCCCCTCTTCGTCATGCCGGCCATGTTGGAACCCCTGATCCTGGGCATGGATTTCCTGGCCACGATCGGCACCACCATCCTCGAAGC----------------------T-----CA--------------GGAGCCCGCCAACGAGGAACAAGACC-CTCGCATC--------AAAGCGTTCTTATACGAGCAGCTG----GTCCAGTTCGAGGGAATG-ACAGGAGTGGCCAACATCGCCGAGCASizeHit CountTotal NormTotal
No Reads
droFic1
CA-T----------------------------AG----CCAGGATCACACTAGTACAGGATCTCCTCGAGGTGCCATTACTTGTCATGCCATCCATGCTGGAACCCTTGATTTTAGGATTAGACTTCCTGGGTAGTATAGGAACGACGCTGCGCTGCGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CA-T----------------------------AG----CCCGGATCATGCTAGTACAGGACCTCCTCGAGGTGCCGCTACTAGTCATGCCATCCATGCTGGAACCTTTGATTTTAGGATTAGACTTTCTTAAAAATATAGGCACGACACTGCGCTGCGGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CGATCGGTCATGTCTGAATGTGACGAAATTGTGGCGAACCCCGGTCACGTTGGCGGGCACCACAGTACTCTTACCCATGTTGGTGATGCCCACCATGTTGGACCGAGTGATACTTGGGATGGATTTCCTCAAAGCAGCCGGGACGCGCGTGCGATGTGGGCAGGCCACC-----------CTCGAATTG--------------CGATCCGAACCCCAAGCAAAAGGGCATCCTTTGTT--------AAGGC-TTCCTCGAACGAGAGTTA----GCTTTGTTCGAGAG--------------TCTCAGATCGCTGAGCASizeHit CountTotal NormTotal
No Reads
droBia1
TA-T----------------------------GG-------GAGCTA-----------------------------------------TATGTTATA-------------------------------------------------------------G---------------------------TCG-----TCCGATT---------------------------------------------------------------------------------------------------------------TTGATAASizeHit CountTotal NormTotal
No Reads
droTak1
GGGT----------------------------AG----TAACCATCCACCTGGGTCTCCAACAAGTACAGCTGCTCCTGCTAGTGATGCCCACGGTACTAGATGATCTCCTGCTAGGAATCGATTTCCTTTGCGGCATCAAGGCCATTATTAGCTGCGGAGGAGAATTA-----------TTACAACTG----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
C----------------------------------------------------------------------------------------------------------------TGGGGATGGACTTCTTGGCAAAAGTAGGAACGACAATACGATGCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TT-------------------------------A----CCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
No Reads
droYak3
C----------------------------------------------------------------------------------------------------------TCCTGCTAGGAATGGATTTCCTTTGTGGCATTAGGGCCACCATCAGCTGCGGAGGAGAACTT-----------TTACAATTG--------------AA---------------------------------------------------------------------------------------------------------------CCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
T-----------------------------------------------------------------------------GCTAGTGATGCCTGCTATACTGGACCATCTCCTGATAAGGATGGGTTTCCTTTGTGGCATTAAGGCCACCACCAGCTGCGAAGGAGAACTA-----------TTGCAACTG----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:22 PM