ID:

dwi_2483

 Coordinate:

scf2_1100000004902:4635260-4635410 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -10.0 -10.0

Flybase annnotation

exon [dwil_GLEANR_11995:2]; CDS [Dwil\GK11818-cds]; intron [Dwil\GK11818-in]

No Repeatable elements found

mature
  1. scf2_1100000008550:255-278 -
  2. scf2_1100000008778:352-375 +
  3. scf2_1100000004341:723-746 -
  4. scf2_1100000004401:874135-874158 -
  5. scf2_1100000004510:2542224-2542247 +
  6. scf2_1100000004943:4059444-4059467 -
  7. dwi_2483  scf2_1100000004902:4635322-4635345 +
  8. scf2_1100000004909:2140737-2140760 +
  9. scf2_1100000004963:335635-335658 -
  10. scf2_1100000012435:1357-1380 -
star
  1. scf2_1100000002608:4918-4938 +
  2. scf2_1100000010938:982-1002 +
  3. scf2_1100000003369:7040-7060 +
  4. scf2_1100000008602:540-560 +
  5. scf2_1100000003621:1324-1344 +
  6. scf2_1100000014111:1073-1093 +
  7. scf2_1100000002362:505-525 +
  8. scf2_1100000004382:10305-10325 +
  9. scf2_1100000004558:1240263-1240283 +
  10. scf2_1100000004585:13299-13319 +
  11. scf2_1100000004585:4782940-4782960 +
  12. scf2_1100000004762:2194648-2194668 +
  13. scf2_1100000004822:764239-764259 +
  14. scf2_1100000004888:137913-137933 +
  15. dwi_2483  scf2_1100000004902:4635362-4635382 +
  16. scf2_1100000004949:2206395-2206415 +
  17. scf2_1100000004953:1239952-1239972 +
  18. scf2_1100000004958:1579703-1579723 +
  19. scf2_1100000004961:2400187-2400207 +
  20. scf2_1100000000036:1346-1366 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GACAAGGTGGAGGTCACCATCAGCGCAATTTCAACGATAGAAATTCGAATGTGAGTAAAAACATAGTCAGTTAATAATTTACCAAATTGAAGGATAACCAGAGGTCTTGGGCTAACTTCGACCGCGTCAAAGGTTGTATACCCTTGCAACTTTTTTGGTAACTTTTTCCTTACCTATAGCAATCAAAGTGGAAAAACGTTTAAGCTAGAAGGGCTAATGTGTCCGAAAGGTCGGCCTACAATCTTAGCATA
****************************************************************************************************************........((((....((((((((((......)))))))))).))))..............****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
........................................................................................................................................................................................................TAAGCTAGAAGGGCTAATGTGTC............................ 23 0 2 0.50 1 0 0 1 0
................................................................................................................TAACTTCGACCGCGTCAAAGGTTG................................................................................................................... 24 0 10 0.40 4 2 1 0 1
....................................................................................................................................................................................................CGTTTAAGCTGGAAGGGCTAA.................................. 21 1 4 0.25 1 0 1 0 0
.........................................................................................................................................ATACCCTTGCAACTTTTTTGG............................................................................................. 21 0 20 0.20 4 4 0 0 0
................................................................................................................TAACTTCGACCGCGTCAAAGG...................................................................................................................... 21 0 10 0.10 1 1 0 0 0
..................................................................................................................................................................................GCAATCAAAGTGGAAAAACGTTTAAGC.............................................. 27 0 19 0.05 1 0 1 0 0
.......................................................................................................................................................................................CAAAGTGGAAAAACGTTTAAGCTA............................................ 24 0 20 0.05 1 1 0 0 0
..........................................................................................................................................TACCCTTGCAACTTTTTTGGTAACTTT...................................................................................... 27 0 20 0.05 1 1 0 0 0
........................................................................................................................................................TTTTGGTAACTTTTTCCTTAC.............................................................................. 21 0 20 0.05 1 0 1 0 0
.............................................................................................................GGCTAACTTCGACCGCGTCAAA........................................................................................................................ 22 0 20 0.05 1 0 1 0 0
.........................................................................................................................................................................TTACCTATAGCAATCAAAGTGGAGTT........................................................ 26 3 20 0.05 1 1 0 0 0
..............................................................................................................................................................................TATAGCAATCAAAGTGGAAAAACGTT................................................... 26 0 20 0.05 1 0 1 0 0
......................................................................................................................................................TTTTTTGGTAACTTTTTCC.................................................................................. 19 0 20 0.05 1 1 0 0 0
........................................................................................................................................TATACCCTTGCAACTTTTTTGGTAACT........................................................................................ 27 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

CTGTTCCACCTCCAGTGGTAGTCGCGTTAAAGTTGCTATCTTTAAGCTTACACTCATTTTTGTATCAGTCAATTATTAAATGGTTTAACTTCCTATTGGTCTCCAGAACCCGATTGAAGCTGGCGCAGTTTCCAACATATGGGAACGTTGAAAAAACCATTGAAAAAGGAATGGATATCGTTAGTTTCACCTTTTTGCAAATTCGATCTTCCCGATTACACAGGCTTTCCAGCCGGATGTTAGAATCGTAT
******************************************************************************........((((....((((((((((......)))))))))).))))..............**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body
...................................................................................................................GAAGCTGGCGCAGTTTCCAACATAT............................................................................................................... 25 0 8 0.13 1 0 0 1
.........................................................................................................................GGCGCAGTTTCCAACATAT............................................................................................................... 19 0 9 0.11 1 1 0 0
.......................................................................................................................................................................GGAATGGATATCGTTAGTTTCACCTT.......................................................... 26 0 18 0.11 2 2 0 0
.......................................................................................................................................................................GGAATGGATATCGTTAGTTTCACCT........................................................... 25 0 18 0.11 2 2 0 0
........................................................................................................................................................................GAATGGATATCGTTAGTTTCACCT........................................................... 24 0 18 0.06 1 1 0 0
.......................................................................................................................................................................GGAATGGATATCGTTAGTTTCACCTTT......................................................... 27 0 18 0.06 1 1 0 0
......................................................................................................................................................................AGGAATGGATATCGTTAGTTTCACCTT.......................................................... 27 0 18 0.06 1 1 0 0
....................................................................................................................................................................AAAGGAATGGATATCGTTAGTTTC............................................................... 24 0 19 0.05 1 1 0 0
.........................................................................................................................................................................AATGGATATCGTTAGTTTCACCTTTTT....................................................... 27 0 19 0.05 1 0 1 0
...........GCAGGGGCAGTCGCGTTA.............................................................................................................................................................................................................................. 18 3 20 0.05 1 0 1 0
................................................................................................................................................................................ATCGTTAGTTTCACCTTTTTGCAAAT................................................. 26 0 20 0.05 1 1 0 0
............................................................................................................CCCGATTGAAGCTGGCGCA............................................................................................................................ 19 0 20 0.05 1 0 1 0
.................................................................................................................................................................................TCGTTAGTTTCACCTTTTTGCAAAT................................................. 25 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004902:4635210-4635460 + dwi_2483 GACAAGGTGGA-------G---GTCACCATCAGC----GCAATTT------CAACGA-------------------TAGAAAT--------------------------TCGAATGTGAGTAAAAACATAGTCAGTTAATAATTTACCAAATTGAAGGATAACCAGAG--GT--------------------------------------------------------------------CTTGGGCTAACTTCGACC-GCGTCAAAGGTTGTATACC------CTTGCAACTT----------------T-----------------------------------------TTT------------------------------------------------------GGTA-ACTTTTTCCTTACCTATAGCAATCAAAGTGGAAAAACGTTTAAGCTAGAAGGGCTAATG----------------------------------------------------------TGTCCGAAAGGTCGGCCTACAATC----------------------------------------------------------------------------TTAGCA-T-A
droVir3 scaffold_10230:107649-107893 - GGGGTGGGAGA-------T---GTCTCCTTCTATGCATTACACAT------TTCACG----------------ACAAAATTATAATACCC------T-CTGC-------------AAGGGTATAAAAATTGTAATATAA----------------------------AATAAATTTA-AGT------------------------------------------------AAAACGAGAAAGAAGGGCTATCTTCGGC--ACGCCAAAGATCTAATACC------CTTGCAGACC----------------CAA--CCTTTTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTATCTAAGAAGTAAGTGGAAAATAGTAAATGCCGAGT-------------TTGGTCAAGATATCT-T-G
droMoj3 scaffold_6498:1226280-1226303 + CTAGAGGTCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCATCAACT-G-C
droGri2 scaffold_14906:8098866-8098894 + AGCAATGGCCAT--------------CCGTCAGA----GCAACTG------CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:24172397-24172452 - CGGCCAC--------------------CACCAGC----GCAACTA------CAATGA-------------------CAGGAAT--------------------------CTGA-----------------------------------------------------------------ATA------------------------------------------------ATAATAATAACGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droPer2 scaffold_3:6942413-6942468 - CGGCCAC--------------------CACCAGC----GCAACTA------CAATGA-------------------CAGGAAT--------------------------CTGA-----------------------------------------------------------------ATA------------------------------------------------ATAATAATAACGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droAna3 scaffold_13744:40728-40967 - AATTTAAATGCT---------------------C----AGTAATG------CGATAA-------------------GTAAATT--------------------------TTCA--------------------ATAGAA----------------------------GATGATAATA-A----------------------------------------------TTTAAAAACAAGAATGGAAAGCTAACTTCGGGCGGAGCCGAAGTTGATATACC------CTTGCATATT----------------A-----------------------------------------TTAGATATATATTATTAGATATATAGAAGATCGTATATA--------------------------GTCGGCCGATC---------------------------------------CTTATGAAATTTGGCAAGTCAGATTATTTTGTCCAAAAT--------------------AGAAT------------------------CTGTACCAAGT--------------------------------------------------------CCCATCTTTCTAACT-T-A
droBip1 scf7180000394989:1543-1791 - GACATAATGAA-------G---ATTA------AA----AAATTTTTACAATTGTAAAATTAAATAAAAATAT-------------TACA---------ATTAAAGAAAAA----------------------------------------------------------------TAA-AAA------------------------------------------------AAAACAAGAAAGCAAAGCTAACTTCGGGCGGAGCCGAAGTTGATATACC------CTTGCAGCTA----------------AAA---------------------------------------CCGGATATATATCGCAA----------ACATCGGATATA--------------------------GTTGGCCGATC---------------------------------------CTTATGGAATTTGGTAGGTTGGATCAACTGACCAAAAAT--------------------AGAAT------------------------CTGTATTAAAT--------------------------------------------------------TTCAGCTTTCCATCT-TCA
droKik1 scf7180000302660:101360-101600 - GACAATGGAAA-------GAAAGCCTTCGTCGAT----GCAAG------------AC-------------------CTAAAAT---TTC-TAATTATTAATAAAGGAAGT----------------------------------------------------------------TAAAACA------------------------------------------------TTAACAAGAAAGGA-AGCTAACTTCGTC--ACGCCGAAGTTTGTATACC------CTTGCAGATT----------------GGTTTTTATGTTTATATTATAGATTTAAATGCTGAAAGCACTCAC-----------------AGAACAGAGTTTCATTACA--------------------------TTTTACCTATA---------------------------------------CTTATTATGTT-TACAGTTT------------------------------------------------------GACAG-TTACAGT-----------------------------------------------------------------------------TTTACA-T-T
droFic1 scf7180000454055:1838109-1838364 - AAAAGGAAGGA-------G---ATCCCAACGAAG----GAGATCC------CAACGA-------------------AGGAGAT--------------------------CC-------------------------CGG---------------------------------------ACAACAACAATGTGAAAAACTAATCAAAGCAGAACTCATTAAGCATAGTAAAAAACAAGAAAGGA-AGCTAGCTTCGGC--AAGCCGAAGCTTATATACC------CTTGCAGTCA----------------T-CAAATATGTC---------------------------------------------------------------GATATA--------------------------GTTGTCCGATT---------------------------------------TTGATCAAATTTAAC--------------------------------------------------------------------------------------------------TCGTAATTCAAGAGTCGTAAGAACACTCTATATTCCAAAAATTATACTTGTCT--GA-T-G
droEle1 scf7180000490238:45077-45283 - TTATCAGT-----------------------AGA----AGAATTG------GAACGA-------------------GCAGAAA--------------------------TGAAA-----------------ATATTTAA-ACTACATCAGATTAAAGAATTTCCAGAA--AAATTGA-GAG------------------------------------------------AAAACAAGAATGGA-AGCAAACTACGGC--GCGCCGAAGTTTATATACC------CTTGCAGCTC----------------T-----------------------------------------TGC------------------------------------------------------AGTA-ATTAATTATTC--T----------------TGAAAACATTAAAATTAT---GATTGACT----------------------------------------------------------TGCTTAAATGTTTAAGCTA-------------------------------------------------------------------------------------TG-A-T
droRho1 scf7180000768873:1864-2079 - GCTCAAGTGAA-------A---GTCA------GG-------------CAGCCAGCGAAAAAACCTCGCATAGTGCAAAAAAACAATACC---------AAGCTAGAAAAT----------------------------------------------------------------TAA-AAA------------------------------------------------AAAACAAGAAAGGAAAGCTAACTTCGGGCAGAGCCGAAGTTGATATACC------CTTGCAGAAT----------------A-----------------------------------------TTC------------------------------------------------------CATA-AAT--------------------------------------------------------------------------TATATTCTCCAAAATTATTCATATGATGCATTCTTAATAC------------------------TCATAAAAAGT--------------------------------------------------------TCCAACTTCCTAACT-T-T
droBia1 scf7180000301257:17953-18152 - AGCCCAGTTAAATCGAGAGAAAGTCT------------------G-AATGCTAAAGAGTTAAACTATCATTT-------------TTTA---------A---------------------------------------------------TCTGATGGAAAA-------------C-------------------------------------------------TTCCAAAACAAAAAAGGA-AGTTAACTTCGGC--AAGCCGAAGTTTGTATACC------CTTGCAGTGT----------------T---------------------------------------------------------AAGAAATAATCAACTTTAGTAACACCATGTGAAACTTTTAAGGATTGTTGCTGACTTCAGTGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-T-A
droTak1 scf7180000415821:2411-2650 - GTGAAGAAAAT-------T---ATTA------GA----TAAATAT------TAGTGA-------------------AGAAAAT--------------------------TA-------------------------TGA-GATAAATAATAGTGAAGAATATAATGAAATAAATGAA-AAT------------------------------------------------AAAACAAGAAAGGA-AGTTAGCTTCGGC--CAGCCGAAGTTTATATACC------CTTGCAGGTATGCCTACTTAAAATGTGGTTTT-------------------------------------------TACATTGTCAACAAGAAAGGAAGCTAGCTTCG--------------------------GCCAGCCGAAG---------------------------------------CTTATATACCCTTGCAGATCAT-----------------------------------------------------------------------------------------------------------------------------------------TCCTATTAATTCA-C
droEug1 scf7180000409118:105608-105656 + ATGGAAAT-----------------------------------------------------------------------------------------------------TCGAAGGGGGCTAAAAATATACTTAATTATTTAAATGCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
dm3 chr3R:5367404-5367441 - GACACC----------------------ACCAGC----GCAACTA------CAACGA-------------------CAGGAAC--------------------------TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:22212135-22212184 + AACTTTT------------------------TGC----ATAATCG------CGACAA-------------------CTAATAT--------------------------ATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGTTAAAACTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
droSec2 scaffold_40:105218-105273 + TTATTTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGT------------------------------------AC---------------------------------------------------------------------------TTTTTTTAATC-ACTTTTGACTTACGTGTATCCATCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-G-T
droYak3 2L:1475301-1475475 - GGCAACGGTGGT------------C--AGCAAAC----GCCACAA------AATGGA-------------------AAGGAAC--------------------------CGCC-----AGTAGGAACCCA--CAAGTAACAACCCACCAAAAAGGTGAGGGGTCAGAC--TT--------------------------------------------------------------------CTCGATCGGATTTAACGC-CCATTAACAATTTAACACATTTATTTGTCC------------------------------------AA---------------------------------------------------------------------------CTTTTACAATT-TATTTGCAATTTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG-T-A
droEre2 scaffold_4770:16233291-16233329 + GGACAC---------------------CATCAGC----GCAACTA------CAACGA-------------------CAGGAAC--------------------------TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
GACAAGGTGGA-------G---GTCACCATCAGC----GCAATTT------CAACGA-------------------TAGAAAT--------------------------TCGAATGTGAGTAAAAACATAGTCAGTTAATAATTTACCAAATTGAAGGATAACCAGAG--GT--------------------------------------------------------------------CTTGGGCTAACTTCGACC-GCGTCAAAGGTTGTATACC------CTTGCAACTT----------------T-----------------------------------------TTT------------------------------------------------------GGTA-ACTTTTTCCTTACCTATAGCAATCAAAGTGGAAAAACGTTTAAGCTAGAAGGGCTAATG----------------------------------------------------------TGTCCGAAAGGTCGGCCTACAATC----------------------------------------------------------------------------TTAGCA-T-ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGCTAGAAGGGCTAATG----------------------------------------------------------TGTC..........................................................................................................2320.50100100
.......................................................................................................................................................................................................................................................TAACTTCGACC-GCGTCAAAGGTTG.................................................................................................................................................................................................................................................................................................................................................................................24100.40412010
.................................................................................................................................................................................................................................................................................ATACC------CTTGCAACTT----------------T-----------------------------------------TTT------------------------------------------------------GG......................................................................................................................................................................................................................................21200.20404000
.......................................................................................................................................................................................................................................................TAACTTCGACC-GCGTCAAAGG....................................................................................................................................................................................................................................................................................................................................................................................21100.10101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATCAAAGTGGAAAAACGTTTAAGC......................................................................................................................................................................................27190.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTGGAAAAACGTTTAAGCTA....................................................................................................................................................................................24200.05101000
..................................................................................................................................................................................................................................................................................TACC------CTTGCAACTT----------------T-----------------------------------------TTT------------------------------------------------------GGTA-ACTTT..............................................................................................................................................................................................................................27200.05101000
......................................................................................................................................................................................................................................................................................................................T-----------------------------------------TTT------------------------------------------------------GGTA-ACTTTTTCCTTAC......................................................................................................................................................................................................................21200.05100010
....................................................................................................................................................................................................................................................GGCTAACTTCGACC-GCGTCAAA......................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCTATAGCAATCAAAGTGGAGTT................................................................................................................................................................................................26200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................TATAGCAATCAAAGTGGAAAAACGTT...........................................................................................................................................................................................26200.05100010
....................................................................................................................................................................................................................................................................................................TT----------------T-----------------------------------------TTT------------------------------------------------------GGTA-ACTTTTTCC..........................................................................................................................................................................................................................19200.05101000
................................................................................................................................................................................................................................................................................TATACC------CTTGCAACTT----------------T-----------------------------------------TTT------------------------------------------------------GGTA-ACT................................................................................................................................................................................................................................27200.05101000
droVir3
GGGGTGGGAGA-------T---GTCTCCTTCTATGCATTACACAT------TTCACG----------------ACAAAATTATAATACCC------T-CTGC-------------AAGGGTATAAAAATTGTAATATAA----------------------------AATAAATTTA-AGT------------------------------------------------AAAACGAGAAAGAAGGGCTATCTTCGGC--ACGCCAAAGATCTAATACC------CTTGCAGACC----------------CAA--CCTTTTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTATCTAAGAAGTAAGTGGAAAATAGTAAATGCCGAGT-------------TTGGTCAAGATATCT-T-GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................TTACACAT------TTCACG----------------ACAAAATTATAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.75150000000000000000000000000001500000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCTTTGCCTCTATCTAAGAAG..........................................................25200.60120000000000000000000000000100110000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGATCTAATACC------CTTGCAGACC----------------CAA--CC....................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000001000000020000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCT......................................................................26200.153000000000000000000000000200000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAGTAAATGCCGAGT-------------TTGGTCA............25200.153000000000000000000000000000030000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATAGTGCTTTGCCTCTATCTAAGAAG..........................................................28200.102000000000000000000000000000000000020000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAGTAAATGCCGAGT-------------TTGG...............22200.102000000000000000000000000000002000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................A-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTATC.................................................................25200.102000000000000000000000000000020000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTATCT................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTATC.................................................................28200.051000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTA...................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TTTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGC........................................................................25200.051000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CC------CTTGCAGACC----------------CAA--CCTTTTC---------------------------------------------------------------------------------------AT......................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................CC------CTTGCAGACC----------------CAA--CCT...................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTGCTTTGCCTCTATCTAAGAAGTA........................................................27200.051000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................A-AGT------------------------------------------------AAAACGAGAAAGAAGGG...........................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTA...................................................................29200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCT....................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AAAACGAGAAAGAAGGGCTATCTTCGGC--..............................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTATCTAAG.............................................................28200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCT....................................................................28200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTG..............................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTAT..................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTCGGC--ACGCCAAAGATCTAATACC------CT...................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAATGCCGAGT-------------TTGGTCAA...........22200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AA--CCTTTTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGC.............................................................................25200.051000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTGCTTTGCCTCTATC.................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGCCGAGT-------------TTGGTCAAGATATCT-...27200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AA--CCTTTTC---------------------------------------------------------------------------------------ATAA-TG-C-----------------------------------------------------------------------------------------------------------------------------------------TCATAGTG..............................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTTGCCTCTATCTAAGAAGTT........................................................26200.051000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................AAAGATCTAATACC------CTTGCAGACC----------------...........................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
droMoj3
CTAGAGGTCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCATCAACT-G-CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGCAATGGCCAT--------------CCGTCAGA----GCAACTG------CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....ATGGCCAT--------------CCGTCAGA----GCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
dp5
CGGCCAC--------------------CACCAGC----GCAACTA------CAATGA-------------------CAGGAAT--------------------------CTGA-----------------------------------------------------------------ATA------------------------------------------------ATAATAATAACGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CGGCCAC--------------------CACCAGC----GCAACTA------CAATGA-------------------CAGGAAT--------------------------CTGA-----------------------------------------------------------------ATA------------------------------------------------ATAATAATAACGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................TGA-------------------CAGGAAT--------------------------CTGA-----------------------------------------------------------------ATA------------------------------------------------ATAATAATAAC.................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
........................................AACTA------CAATGA-------------------CAGGAAT--------------------------CTGA-----------------------------------------------------------------AT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
droAna3
AATTTAAATGCT---------------------C----AGTAATG------CGATAA-------------------GTAAATT--------------------------TTCA--------------------ATAGAA----------------------------GATGATAATA-A----------------------------------------------TTTAAAAACAAGAATGGAAAGCTAACTTCGGGCGGAGCCGAAGTTGATATACC------CTTGCATATT----------------A-----------------------------------------TTAGATATATATTATTAGATATATAGAAGATCGTATATA--------------------------GTCGGCCGATC---------------------------------------CTTATGAAATTTGGCAAGTCAGATTATTTTGTCCAAAAT--------------------AGAAT------------------------CTGTACCAAGT--------------------------------------------------------CCCATCTTTCTAACT-T-ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGATTATTTTGTCCAAAAT--------------------AGAAT------------------------C.....................................................................................2911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................TAGAAGATCGTATATA--------------------------GTC.............................................................................................................................................................................................................................19200.102020000
...........................................................................................................................................................................................................................................................TTCGGGCGGAGCCGAAGTTGATATA.............................................................................................................................................................................................................................................................................................................................................................................25200.102200000
................................................................................................................................................................................................................................................................................................................................................................................................GTATATA--------------------------GTCGGCCGATC---------------------------------------CTT...........................................................................................................................................................................21200.051001000
......................................................................................................................................................................................................................................................................CCGAAGTTGATATACC------CTTGCA...............................................................................................................................................................................................................................................................................................................................................................22200.051010000
............................................................................................................................................................................................................................................GAATGGAAAGCTAACTTCGGGCG..............................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
...............................................................................................................................................................................................................................................TGGAAAGCTAACTTCGGGCG..............................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------AGAAT------------------------CTGTACCAAGT--------------------------------------------------------CCCATCT............24200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................TAGAAGATCGTATATA--------------------------GTCGGCCGAT......................................................................................................................................................................................................................26200.051000010
droBip1
GACATAATGAA-------G---ATTA------AA----AAATTTTTACAATTGTAAAATTAAATAAAAATAT-------------TACA---------ATTAAAGAAAAA----------------------------------------------------------------TAA-AAA------------------------------------------------AAAACAAGAAAGCAAAGCTAACTTCGGGCGGAGCCGAAGTTGATATACC------CTTGCAGCTA----------------AAA---------------------------------------CCGGATATATATCGCAA----------ACATCGGATATA--------------------------GTTGGCCGATC---------------------------------------CTTATGGAATTTGGTAGGTTGGATCAACTGACCAAAAAT--------------------AGAAT------------------------CTGTATTAAAT--------------------------------------------------------TTCAGCTTTCCATCT-TCASizeHit CountTotal NormTotal
No Reads
droKik1
GACAATGGAAA-------GAAAGCCTTCGTCGAT----GCAAG------------AC-------------------CTAAAAT---TTC-TAATTATTAATAAAGGAAGT----------------------------------------------------------------TAAAACA------------------------------------------------TTAACAAGAAAGGA-AGCTAACTTCGTC--ACGCCGAAGTTTGTATACC------CTTGCAGATT----------------GGTTTTTATGTTTATATTATAGATTTAAATGCTGAAAGCACTCAC-----------------AGAACAGAGTTTCATTACA--------------------------TTTTACCTATA---------------------------------------CTTATTATGTT-TACAGTTT------------------------------------------------------GACAG-TTACAGT-----------------------------------------------------------------------------TTTACA-T-TSizeHit CountTotal NormTotal
No Reads
droFic1
AAAAGGAAGGA-------G---ATCCCAACGAAG----GAGATCC------CAACGA-------------------AGGAGAT--------------------------CC-------------------------CGG---------------------------------------ACAACAACAATGTGAAAAACTAATCAAAGCAGAACTCATTAAGCATAGTAAAAAACAAGAAAGGA-AGCTAGCTTCGGC--AAGCCGAAGCTTATATACC------CTTGCAGTCA----------------T-CAAATATGTC---------------------------------------------------------------GATATA--------------------------GTTGTCCGATT---------------------------------------TTGATCAAATTTAAC--------------------------------------------------------------------------------------------------TCGTAATTCAAGAGTCGTAAGAACACTCTATATTCCAAAAATTATACTTGTCT--GA-T-GSizeHit CountTotal NormTotal
No Reads
droEle1
TTATCAGT-----------------------AGA----AGAATTG------GAACGA-------------------GCAGAAA--------------------------TGAAA-----------------ATATTTAA-ACTACATCAGATTAAAGAATTTCCAGAA--AAATTGA-GAG------------------------------------------------AAAACAAGAATGGA-AGCAAACTACGGC--GCGCCGAAGTTTATATACC------CTTGCAGCTC----------------T-----------------------------------------TGC------------------------------------------------------AGTA-ATTAATTATTC--T----------------TGAAAACATTAAAATTAT---GATTGACT----------------------------------------------------------TGCTTAAATGTTTAAGCTA-------------------------------------------------------------------------------------TG-A-TSizeHit CountTotal NormTotal
No Reads
droRho1
GCTCAAGTGAA-------A---GTCA------GG-------------CAGCCAGCGAAAAAACCTCGCATAGTGCAAAAAAACAATACC---------AAGCTAGAAAAT----------------------------------------------------------------TAA-AAA------------------------------------------------AAAACAAGAAAGGAAAGCTAACTTCGGGCAGAGCCGAAGTTGATATACC------CTTGCAGAAT----------------A-----------------------------------------TTC------------------------------------------------------CATA-AAT--------------------------------------------------------------------------TATATTCTCCAAAATTATTCATATGATGCATTCTTAATAC------------------------TCATAAAAAGT--------------------------------------------------------TCCAACTTCCTAACT-T-TSizeHit CountTotal NormTotal
No Reads
droBia1
AGCCCAGTTAAATCGAGAGAAAGTCT------------------G-AATGCTAAAGAGTTAAACTATCATTT-------------TTTA---------A---------------------------------------------------TCTGATGGAAAA-------------C-------------------------------------------------TTCCAAAACAAAAAAGGA-AGTTAACTTCGGC--AAGCCGAAGTTTGTATACC------CTTGCAGTGT----------------T---------------------------------------------------------AAGAAATAATCAACTTTAGTAACACCATGTGAAACTTTTAAGGATTGTTGCTGACTTCAGTGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-T-ASizeHit CountTotal NormTotal
No Reads
droTak1
GTGAAGAAAAT-------T---ATTA------GA----TAAATAT------TAGTGA-------------------AGAAAAT--------------------------TA-------------------------TGA-GATAAATAATAGTGAAGAATATAATGAAATAAATGAA-AAT------------------------------------------------AAAACAAGAAAGGA-AGTTAGCTTCGGC--CAGCCGAAGTTTATATACC------CTTGCAGGTATGCCTACTTAAAATGTGGTTTT-------------------------------------------TACATTGTCAACAAGAAAGGAAGCTAGCTTCG--------------------------GCCAGCCGAAG---------------------------------------CTTATATACCCTTGCAGATCAT-----------------------------------------------------------------------------------------------------------------------------------------TCCTATTAATTCA-CSizeHit CountTotal NormTotal
No Reads
droEug1
ATGGAAAT-----------------------------------------------------------------------------------------------------TCGAAGGGGGCTAAAAATATACTTAATTATTTAAATGCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
dm3
GACACC----------------------ACCAGC----GCAACTA------CAACGA-------------------CAGGAAC--------------------------TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................ACTA------CAACGA-------------------CAGGAAC--------------------------TTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................A------CAACGA-------------------CAGGAAC--------------------------TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGC----GCAACTA------CAACGA-------------------CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................CAACTA------CAACGA-------------------CAGGAAC--------------------------TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CAACTA------CAACGA-------------------CAGGAAC--------------------------TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CACC----------------------ACCAGC----GCAACTA------CAACGA-------------------CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TA------CAACGA-------------------CAGGAAC--------------------------TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GC----GCAACTA------CAACGA-------------------CAGGAAC--------------------------TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AACTA------CAACGA-------------------CAGGAAC--------------------------TTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................AACGA-------------------CAGGAAC--------------------------TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCAACTA------CAACGA-------------------CAGGAAC--------------------------TTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AACTTTT------------------------TGC----ATAATCG------CGACAA-------------------CTAATAT--------------------------ATAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACGTTAAAACTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TTATTTATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGT------------------------------------AC---------------------------------------------------------------------------TTTTTTTAATC-ACTTTTGACTTACGTGTATCCATCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-G-TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GGCAACGGTGGT------------C--AGCAAAC----GCCACAA------AATGGA-------------------AAGGAAC--------------------------CGCC-----AGTAGGAACCCA--CAAGTAACAACCCACCAAAAAGGTGAGGGGTCAGAC--TT--------------------------------------------------------------------CTCGATCGGATTTAACGC-CCATTAACAATTTAACACATTTATTTGTCC------------------------------------AA---------------------------------------------------------------------------CTTTTACAATT-TATTTGCAATTTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG-T-ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GGACAC---------------------CATCAGC----GCAACTA------CAACGA-------------------CAGGAAC--------------------------TTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................ATCAGC----GCAACTA------CAACGA-------------------CAGGAAC--------------------------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010

Generated: 05/18/2015 at 04:40 AM