ID:

dwi_2456

 Coordinate:

scf2_1100000004902:2878881-2879099 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9

Flybase annnotation

exon [dwil_GLEANR_11601:6]; CDS [Dwil\GK11386-cds]; exon [dwil_GLEANR_11601:5]; CDS [Dwil\GK11386-cds]; intron [Dwil\GK11386-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------######--------------------------------------------
TGCGCAGTAATTCCAAGGGACAGATAGGTTTCTTGCGCCAGCCGAATCGTGTATGTGTTGCTCTATCCAGAGCACGAAGGGGCCTCTATATAGTCGGAGATATAGAAACACTGCAGCGAGGCAATCGTGAACTCTGGGGAAGAATTTGCCAGCAACTAAACGAAGACAATGCAATTGGTGAAAAGTTCCCTTGGCAAACAAACTTTGAAAATGTAAAACTATAGATTACACTGTGGTTTCTTTATACTTCTTGTTTTTTATTTATATAGAGATGAGTTCGCTAAACGAAGATTGCTTGCTATGTACGTGCACGCCTCGT
*********************************************************************************************************************.......((((.....((((.(((...))).)))).......))))......****************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M045
female body
 V119
head
 V118
embryo
 M020
head
............................................................................................................................................................................................................................................................................GAGATGAGTTCGCTAAACGAA.............................. 21 0 1 2.00 2 0 1 1 0 0
.................................................................................................................................................TTGCCAGCAACTAAACGAAGACAA...................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................GAGGCAATCGTGAACTCTGGGGA................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................GGCAATCGTGAACTCTGGGGA................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................TAAAACTATAGATTACACTGT..................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................AACTCTGGGGAAGAATTTGCCAGCAAC................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.................................................................TCCAGAGCACGAAGGGGCC........................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................ACGAAGACAATGCAATTGGTG........................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.........................................................................................ATAGTCGGAGATATAGAAA................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................CTTGCTATGTACGTGCACGC..... 20 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................................................................TTATTTATATAGAGATGAGTTC........................................ 22 0 1 1.00 1 1 0 0 0 0
.............................TTCTTGCGCCAGCCGAATCGT............................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................CGTGAACTCTGGGGAAGAATT............................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................GAGGCAATCGTGAACTCTGGG..................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................TCTTGCGCCAGCCGAATCGTGTATG........................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
......GTAATTCCAAGGGACAGATAGGT.................................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
.GCGCAGTAATTCCAAGGGACA......................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
...................................................................................................................................................................................................................................................................................GTTCGCTAAACGAAGATTGCTT...................... 22 0 1 1.00 1 1 0 0 0 0
...................................................................................................ATATAGAAACACTGCAGCGAG....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................GTGAACTCTGGGGAAGAATTTGCCAG....................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................AGCTCTGGGGAGGAATTTGCCA........................................................................................................................................................................ 22 2 1 1.00 1 0 0 1 0 0
........................................................................................................................................................................................................................AACTATAGATTGCACTGTGGT.................................................................................. 21 1 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................AACTATAGATTACACTGTGGT.................................................................................. 21 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................AAACGAAGACAATGCAATTGGTGA.......................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0
..........................................................................................TGGTCGGAGATATAGAAACACT............................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 0 0 1
...................................................................................................................................................GCCAGCAACTAAACGAAGACAATG.................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0
......................................................................................................TAGAAACACTGCAGCGAGGCA.................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................AATCGTGAACTCTGGGGAAGAA............................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
........AATTCCAAGGGACAGATAGGT.................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................CAAACAAACTTTGAAAATGT......................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
............................................................................................................CACTGCAGCGAGGCAATCGTG.............................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................TTGGTGAAAGGTTCCCTTGGC............................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................................................................................................................................GATTGCTTGCTATGTACGTGC......... 21 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................................................................AGAGATGAGTTCGCTAAACG................................ 20 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................ACTCTGGGGAAGAATTTGCCA........................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................................................TTTATTTATATAGAGATGAGT.......................................... 21 0 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................................................................................................................................................GAAGATTGCTTGCTATGTACG............ 21 0 1 1.00 1 0 1 0 0 0
........................................................................................................................GCAATCGTGAACTCTGGGGAAGAATT............................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................AACTAAACGAAGACAATGCA.................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................TCGCTAAACGAAGATTGCTTG..................... 21 0 1 1.00 1 0 1 0 0 0
...............................................................TATCCAGAGCACGAAGGGGCCTCTATA..................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
......................................................................................................................AGGCAATCGTGAGCTCTGGT..................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0
..................................................................................................................................................................................................................................................................TATTTATATAGAGATGAGTTC........................................ 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................................................ATTTATATAGAGATGAGTT......................................... 19 0 1 1.00 1 0 0 0 1 0
..CGCGGTAATACGAAGGGA........................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

ACGCGTCATTAAGGTTCCCTGTCTATCCAAAGAACGCGGTCGGCTTAGCACATACACAACGAGATAGGTCTCGTGCTTCCCCGGAGATATATCAGCCTCTATATCTTTGTGACGTCGCTCCGTTAGCACTTGAGACCCCTTCTTAAACGGTCGTTGATTTGCTTCTGTTACGTTAACCACTTTTCAAGGGAACCGTTTGTTTGAAACTTTTACATTTTGATATCTAATGTGACACCAAAGAAATATGAAGAACAAAAAATAAATATATCTCTACTCAAGCGATTTGCTTCTAACGAACGATACATGCACGTGCGGAGCA
******************************************************************************************************************************************************.......((((.....((((.(((...))).)))).......))))......********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
 M020
head
...........................................................CGAGATAGGGGTCGTGCTGCC............................................................................................................................................................................................................................................... 21 3 1 540.00 540 397 82 58 3 0
...........................................................CGAGATAGGGGTCGTGCT.................................................................................................................................................................................................................................................. 18 2 1 429.00 429 369 18 36 5 1
...........................................................CGAGATAGGGGTCGTGCTGC................................................................................................................................................................................................................................................ 20 3 2 389.50 779 658 85 34 2 0
...........................................................CGAGATAGGGGTCGTGCTG................................................................................................................................................................................................................................................. 19 3 8 287.50 2300 2291 2 4 1 2
............................................................GAGATAGGGGTCGTGCTGCC............................................................................................................................................................................................................................................... 20 3 2 51.50 103 95 5 3 0 0
..........................................................ACGAGATAGGGGTCGTGCTGC................................................................................................................................................................................................................................................ 21 3 1 42.00 42 39 2 1 0 0
..........................................................ACGAGATAGGGGTCGTGCT.................................................................................................................................................................................................................................................. 19 2 1 35.00 35 24 0 10 1 0
..........................................................ACGAGATAGGGGTCGTGC................................................................................................................................................................................................................................................... 18 2 4 34.00 136 81 37 17 1 0
..........................................................ACGAGATAGGGGTCGTGCTG................................................................................................................................................................................................................................................. 20 3 3 31.67 95 93 0 0 0 2
..........................................................ACGAGATAGGGGTCGTGCTGCC............................................................................................................................................................................................................................................... 22 3 1 28.00 28 17 4 5 0 2
.............................................................AGATAGGGGTCGTGCTGCC............................................................................................................................................................................................................................................... 19 3 8 25.38 203 178 6 19 0 0
............................................................GAGATAGGGGTCGTGCTGC................................................................................................................................................................................................................................................ 19 3 13 22.23 289 281 2 5 1 0
...........................................................CGAGATAGGGGTCGTGCTT................................................................................................................................................................................................................................................. 19 2 1 5.00 5 4 0 1 0 0
...........................................................CGAGATAGGGGTCGTGCTTCCTC............................................................................................................................................................................................................................................. 23 3 1 4.00 4 1 1 2 0 0
.........................................................TACGAGATAGGGGTCGTGC................................................................................................................................................................................................................................................... 19 3 12 3.42 41 29 3 9 0 0
.............................................................AGATAGGGGTCGTGCTTCC............................................................................................................................................................................................................................................... 19 2 1 3.00 3 2 0 1 0 0
......................................GTCGGCTTAGCACATACACAG.................................................................................................................................................................................................................................................................... 21 1 1 3.00 3 0 0 0 0 3
............................................................GAGATAGGGGTCGTGCTTC................................................................................................................................................................................................................................................ 19 2 1 3.00 3 2 0 0 1 0
...........................................................CGAGATAGGGGTCGTGCTTCC............................................................................................................................................................................................................................................... 21 2 1 2.00 2 1 1 0 0 0
.........................................................................................................................................................................................................................................................................................................CGATACATGCACGTGCGGAGC. 21 0 1 2.00 2 0 0 0 2 0
...........................................................CGAGATAGGGCTCGTGCTG................................................................................................................................................................................................................................................. 19 2 1 2.00 2 2 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCTCCC............................................................................................................................................................................................................................................... 21 3 2 2.00 4 3 0 1 0 0
.............................................................AGATAGGGGTCGTGCTTC................................................................................................................................................................................................................................................ 18 2 3 1.33 4 3 0 1 0 0
.........................................................TACGAGATAGGGGTCGTGCT.................................................................................................................................................................................................................................................. 20 3 6 1.33 8 7 0 1 0 0
.........................................................................................................................................................................................................................................................................................ATTTGCTTCTAACGAACGATA................. 21 0 1 1.00 1 0 0 1 0 0
.......................................................................................................................................................................................................................................................................................CGATTTGCTTCTAACGAA...................... 18 0 1 1.00 1 0 0 0 0 1
...........................................................CGAGATAGGAGTCGTGCTGCC............................................................................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
...........................................................CGAGATAGGTGTCGTGCTGCCTC............................................................................................................................................................................................................................................. 23 3 1 1.00 1 0 0 1 0 0
...............................................................................................CCTCTATATCTTTGTGACGTC........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0
...................................................................................................................................................CGGTCGTTGATTTGCTTCTGT....................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................AGATAGGGGTCGTGCTTCCTC............................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0
............................................................GAGATAGGGGTCGTGCTTCC............................................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
..........................................................ACGAGATAGGTGTCGTGC................................................................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................AAGGGAACCGTTTGTTTGAAA................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0
............................................................GAGATAGGTGTCGTGCTGCC............................................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
..............................................AGCACATACACAACGAGATAG............................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................TTACGTTAACCACTTTTCAA.................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.....................................GGTCGGCTTGGCACATACACA..................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 0 1 0
.........................................................................................................................................................TTGATTTGCTTCTGTTACGTT................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
...........................................................CGAGATAGGTGTCGTGCTG................................................................................................................................................................................................................................................. 19 2 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................TTGCTTCTAACGAACGATACATGCACGT........ 28 0 1 1.00 1 1 0 0 0 0
..........................................................ACGAGATAGGGGTCGTGCTTC................................................................................................................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0
.............................................TAGCACATACACAACGAGAT.............................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................TCAAGGGAACCGTTTGTTTGA................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCTGCCC.............................................................................................................................................................................................................................................. 22 3 1 1.00 1 0 1 0 0 0
...........................................................CGAGATAGGGGTCGTGCTTCCT.............................................................................................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0
..........................................................ACGAGATAGGTGTCGTGCTGCC............................................................................................................................................................................................................................................... 22 2 1 1.00 1 0 0 1 0 0
..........................................................ACGAGATAGGGGTCGTGCTTCC............................................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0
............................................................GAGATAGGGGTCGTGCTTCCT.............................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0
..GCGTCGTTAAGGTTCCCTGTC........................................................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
.................................ACGCGGTCGGCTTAGCACATA......................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1
.............................................................................................................TGACGTCGCTCCGTTAGCGCT............................................................................................................................................................................................. 21 1 1 1.00 1 0 0 0 1 0
......................................................................................ATATATCAGCCTCTATATCTT.................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................................................CGAGATAGGTGTCGTGCTGCCT.............................................................................................................................................................................................................................................. 22 3 1 1.00 1 1 0 0 0 0
..........................................................ACGAGATAGGTGTCGTGCTGCCTC............................................................................................................................................................................................................................................. 24 3 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................CGATTTGCTTCTAACGAAC..................... 19 0 1 1.00 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCTGCCCC............................................................................................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0 0
............................................................GAGATAGGGGTCGTGCTGCCC.............................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0
............................................................GAGATAGGGGTCGTGCTT................................................................................................................................................................................................................................................. 18 2 3 0.67 2 2 0 0 0 0
............................................................GAGATAGGGGTCGTGCTCCC............................................................................................................................................................................................................................................... 20 3 3 0.67 2 1 0 1 0 0
...........................................................CGAGATAGGAGTCGTGCTGC................................................................................................................................................................................................................................................ 20 3 3 0.67 2 1 1 0 0 0
.............................................................AGATAGGGGTCGTGCTCCCC.............................................................................................................................................................................................................................................. 20 3 2 0.50 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCTTG................................................................................................................................................................................................................................................ 20 3 2 0.50 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCCTC................................................................................................................................................................................................................................................ 20 3 2 0.50 1 1 0 0 0 0
............................................................GAGATAGGTGTCGTGCTGCCTC............................................................................................................................................................................................................................................. 22 3 2 0.50 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTCCTTCC............................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 1 0 0
............................................................GAGATAGGAGTCGTGCTGCC............................................................................................................................................................................................................................................... 20 3 3 0.33 1 1 0 0 0 0
...........................................................CGAGATAGGCGTCGTGCTGCC............................................................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCTACC............................................................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0
...........................................................CGAGATAGGGCTCGTGCTGCCT.............................................................................................................................................................................................................................................. 22 3 3 0.33 1 1 0 0 0 0
..............................................................GATAGGGGTCGTGCTTCC............................................................................................................................................................................................................................................... 18 2 3 0.33 1 1 0 0 0 0
...............................................................TTAGGTCTCGTGCTGCCCGG............................................................................................................................................................................................................................................ 20 3 3 0.33 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCTAC................................................................................................................................................................................................................................................ 20 3 10 0.30 3 3 0 0 0 0
........................................................CTACGAGATAGGTCAGGTGC................................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 1
.....................TCTATCCGAAGGACACGGTC...................................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 1 0 0 0 0
........................................................TTACGAGATAGGTGTCGTGC................................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0
...........................................................................................................................................GTCTTAAACGTTCGTTGAT................................................................................................................................................................. 19 2 5 0.20 1 0 1 0 0 0
...........................................................CGAGATAGGGGTCGCGCTT................................................................................................................................................................................................................................................. 19 3 5 0.20 1 1 0 0 0 0
....................................................................................................................................................................................TTTGCAGGGGAACCGTTTATT...................................................................................................................... 21 3 5 0.20 1 0 0 1 0 0
............................................................GAGATAGGGTTCGTGCTGCC............................................................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCTCC................................................................................................................................................................................................................................................ 20 3 5 0.20 1 0 0 1 0 0
...........................................................CGAGATAGGGATCGTGCTG................................................................................................................................................................................................................................................. 19 3 11 0.18 2 2 0 0 0 0
.............................................................AGATAGGGGTCGTGCTTCCT.............................................................................................................................................................................................................................................. 20 3 6 0.17 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCGTGCTC................................................................................................................................................................................................................................................. 19 3 14 0.14 2 2 0 0 0 0
...............................................................TTAGGTCTCGTGCTGCCCT............................................................................................................................................................................................................................................. 19 3 9 0.11 1 1 0 0 0 0
............................................................................................CGGCCTTTATGTCTTTGTGA............................................................................................................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0
..........................................................ACCAGATAGGGGTCGTGCT.................................................................................................................................................................................................................................................. 19 3 17 0.06 1 1 0 0 0 0
...........................................................CGAGATAGGGGTCCTGCT.................................................................................................................................................................................................................................................. 18 3 20 0.05 1 1 0 0 0 0
..........................................................ACGAGATGGGGGTCGTGCT.................................................................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004902:2878831-2879149 - dwi_2456 TGCGCAGTAATTCCAAGGGACAGATAGGTTTCTTGCGCCAGCCGAATCGTGTATGTGTTGCTCTATCCAGAGCACGAAGGGGCCTCTATATAGTCGGAGATATAGAAACACTGCAGCGAGGCAATCGTGAACTCTGGGGAAGAATTTGCCAGCAACTAAA-CGAAGACAATGCAATTGGTGA-A--AAGTTCCCT---T-GGCAAACAAACTTTGA-AAA----------T-------------------------------------------------------------------GTA--AA-----------------------ACTATAG-ATTAC-ACTGTGGTTTC-----TTTATACTTCTTGTTTTTT---ATTT--ATAT--AGAG-A---------------------------------------TGA--GTTCGCTAAA-CGAAGATTGCTTGCT-ATGTACGTGCACGCCTCGT----
droVir3 scaffold_12822:2913760-2914086 - TGCGCAGCAATCCGGCTGGGCAGATTGGCTTTCTACGTCAGCCAAATCGTGTTTGTGTCGCCCTATCGCGTGCCCGCTGGGCGCTCTACATGATGGGCAGCATGTCGACTCTGGAGCATGGCAATCCCCAACTCTGGGGAGCTATCCATAGCAAGCTAAT-TGCAGCAAATGCGATTGGTGA-C--GCCTTTCCC---GTGGCCAC-AGAGCACGA-AGA----------GATG----------------ATGCAGCAGA--------TCA---------CAACCTAGTTGGCAT------AAGC--------------GGCATTTTATATATATATATAT-ACATTAAATTA-----AACGTTTTATT--AAT-------TGT--T--------TG---TTTGCTTTTTAATCTA-------------------------------------------------------------GTCTTTTTTTT----
droMoj3 scaffold_6540:7472066-7472431 + TGCGCAGCAATACGGCCGGAAAGATTGGATTTCTCGGATTACCGAACCGCGTTTGTGTGGCCCTATCGCGTGCTCGTTGGGGTCTCTATATGATTGGCAACATGGAGACGCTGCAGCAGGGCAGTTCCGAACTTTGGGGAGCTATCAATGCTAAGCTGCT-AGCAGCAAATGCTATAGGCCC-A--GTGTTTCCGTTGGCCACTGAAAGTACTCCT-TAG----------G--GAACCCATTTTGACAATGGCTATAAGCTGTTTGAATTATTATTGTGTTT-TG---------T------AAAT--------------A-----AAATACGTTGGTTTTT-CAATTTCTGT------------------------------------------ATG---TTTGCTTTTTAATCTAATTGCAGTTTTCTTTTCATTATTGA-TTTTTGTAAT-CAAAGTTCGCC----------------------GT----
droGri2 scaffold_14906:2159119-2159463 - TGCGCAGCAATTCGGCTGGTCAAATTGGTTTTCTGCGCCAGTTGAATCGTGTCTGTGTTGCATTGTCACGTGCTCGTTGCGCACTCTATATGATTGGCAACATGGAGACGCTGCAACGAGGCAATCAACAACTTTGGGGTGCCATCAATAGCAAACTGCA-AGCGGCGAATGCGATAGGTAC-G--GCATTCCCA---TGCATCAC-TGTGCCGAA-GAA----------AGTG-----G---TCAAAATGTCTAAAAAG--------TAACAATT----------ATTTGTCAT------AAAT--------------A-----AAAT---------------GTTTTTTTT-----TTT---TTTT-TTTTTTTTT----GTATCTTC--AAATG---TTTGTTTTTTAATCTAAACGCAC----------------------------------------AGGTTTTTGAATGAGTTTTCTTTCT----
dp5 2:14558777-14559096 + TGCGCAGCAATCCGACCGGCCATATAGGGTTTCTGGCTAAGCCGAATCGTGCTTGTGTAGCTCTTTCCCGAGCACGCTGGGCGCTGTACATGATCGGGAACATGGAGACACTGCAGCAGGGCAACTCGGAGCTGTGGTCCGCGATAGCCGAACGTTTGGA-GGAAACCAATGCCATAGGCGA-T--GCATTTCCT---ATCGTAGTTCGTTCTACA-A-----------------------------------------------------------------AA---------T---AAA--AC-----------------------AAAGTTC-GTTAT-ACATTTGATTC-----TTGGTTTTATT--CGT------ATGT--ATGT--A---CGCATGA--------------GGGGGC--------------GGGG-TTTCTCTGAA-TGAAGATGGCCTGCC-C-----ATGTGCGCCTCGT----
droPer2 scaffold_0:5861522-5861841 - TGCGCAGCAATCCGACCGGCCATATAGGGTTTCTGGCTAAGCCGAATCGTGCTTGTGTAGCTCTTTCCCGAGCACGCTGGGCGCTGTACATGATCGGGAACATGGAGACACTGCAGCAGGGCAACTCGGAGCTGTGGTCCGCGATAGCCGAACGTTTGGA-GGAAACCAATGCCATAGGCGA-T--GCATTTCCT---ATCGTAGTTAGTTCTACA-A-----------------------------------------------------------------AA---------T---AAA--AC-----------------------AAAGTTC-GTTAT-ACATTTGATTC-----TTGGTTTTATT--CGT------ATGT--ATGT--A---CGCATGA--------------GGGGGC--------------GGGG-TTTCTCTGAA-TGAAGATGGCCTGCC-C-----ATGTGCGCCTCGT----
droAna3 scaffold_13340:22470578-22470867 - TCCGAAGCAATTCCGCCGGCCAGATAGGATTCCTGCGGCAGCCGAACCGAGTATGTGTGGCCCTTTCCCGTGCCCGCTGGGCGCTCTATATAGCCGGGAACCTGGAGACGCTACAGAAGGGCAATCGCAAGTTGTGGGGCAGCATAGCTGAACGACTGGAAGGACAACAAT-CCATTGGACAAATAGGATTTCCG---ACAAA-----------------------------------------------------------------------------TA-AC---------T------AATG--------------A-----C----------ATTGT-AA-ATTGATTCACTT-TT------TTTACTTTATTA--------ATAA--TGATGA---------------------------------------GGGGATTTCGGTGAA-AAAAGATCGCCTGCC-A-----AT-TGCG----------
droBip1 scf7180000396721:684859-685150 + TTCGGAGCAATTCTGCCGGTCAGATAGGATTTCTGCGTCAGCCGAACCGAGTGTGCGTAGCCCTTTCCCGCGCTCGCTGGGCCCTCTATATAGCCGGAAACATGGAGACGTTACAAAAGGGCAATCGAACCCTGTGGGGCAGCATAGCTGAACGATTAGAAAGACAACAATCCC-TTGGAAAAATTGCTTTTCCA---ATGA-------TTTCAGA-AAA----------A-------------------------------------------------AG-AC---------T------AAAA--------------A-----C------------AAT-GTAATTGATTCAGTTTTTC--------ACTTTATTA--------ATAA--TGATGA---------------------------------------GGGGATTTCGGTGAA-TAAAGATCGCCTGCC-A----------------------
droKik1 scf7180000302778:444837-445142 + TGCGCAGCAATTCATCCGGTCAAATCGGGTTCCTGCGCCAACCCAATCGCGTGTGTGTGGCTCTTTCCCGAGCTCGCTGGGGTCTATATATCATTGGAAATCTGGAGATGCTGCAGCAAAGCGGCCAAAAGCTTTGGAAAACAATTGCCAATCATTTGGA-GGAGAATGCGGCAATTGGCGA-T--GCCTTTCCC---ACAGCATCCAGTGTCTAAGTTG------------------------------------------------------------CA-AA---------GAAAA--AAAT-----------------------ATAAAACGTTTGT-ACATTTGATTCTCTCTTTA--------CTTTTATTT--------ACTTTATGGTGA---------------------------------------GTGGGTTTCGATGAA-TGATGATCGCCT---------------------------
droFic1 scf7180000453912:1192049-1192366 + TGCGCAGCAATACGTCCGGCCAAATCGGTTTCCTGCGGCAACCGAATCGAGTGTGCGTCGCACTTTCTCGAGCCCGCTGGGCGCTGTATATTATTGGTAATCTAGAGATGTTGCAGCATTCCTACTCCAAACTTTGGAGTCCCATTGCAAAGCGTTTGAC-CGATAGCGCGGCCATTGGAGA-G--GCTTTTCCC---ACCATAACTTGTGCCTGA-CAA----------G-------------------------------------------------------------------TTT--ATACAGTTTATAGTATA-----G----TATGTGTATAT-ACATTTGATTCTC---TTT--------ACTTTATTT--------GTAT--CGATGA---------------------------------------GGGGTTTTTGGTGAA-TAAAGATCGTCTGAC-G-----ATGTGCG----------
droEle1 scf7180000491008:330589-330908 + TGCGCAGCAATCCGTCCGGCCAAATTGGCTTTCTGCGACTTCCGAACCGCGTGTGTGTTGCTCTTTCTCGGGCACGCTGGGCACTTTATATCATCGGTAATCTGGAAATGTTGCAGCAGTCCTGTCCAAAGCTTTGGAGCCCCATTGCCAAGCGTTTGGG-GGAGAATGATTCCGTTGGAGA-G--GCTTTCCCG---ACAACATTTAATCTCTGT-TAA----------A-------------------------------------------------TA-AA---------T------AAAT--------------A-----A----AATGTGTATAT-ACGTTTGATTCTCTC-TTG--------ACTTTATTT--------GTAT--TGATGA---------------------------------------GGGG-TTTCGGTGAA-CAAAGATCGCCTGCC-GATGGTGTGTGCGCCTCGT----
droRho1 scf7180000779477:104320-104623 + TCCGCAGCAATCCGTCCGGCCAAATTGGCTTTTTGAGACTTCCGAATCGAGTCTGTGTGGCTCTTTCTCGGGCCCGATGGGCTCTTTATATTATCGGTAATATAGAGAATTTGCAGAAATCCTACCCAAAGCTTTGGGGTCCCATTGCCAAACGTTTGAA-GGATAATAATGCCATTGGAGA-G--GCTTTCCCC---ATGT--------TACTG--------------------------------------------------------------------AA---------T------AATT--------------A-----A----TATGTATATAT-ACGTTTGATTCTCTC-TTG--------ACTTTATTT--------ATAT--TGATGA---------------------------------------AGGG-ATTCGGTGAA-TAAAGATCGCCG-CT-GATG--ATGTGCGCCTCTTT--T
droBia1 scf7180000302136:377377-377704 + TTCGCAGCAATCCGTCTGGCCAAATAGGCTTTCTTTGTCTTCCCAATCGGGTTTGTGTGGCCCTTTCTCGCGCCCGCTGGGCCCTGTACATCATTGGGGATCTGGAGATGCTGCATAAGTCGTGCCCGAACCTTTGGAGCCCCATTGCCAAGCGTTTGGA-GGAGAACTCCGCCATTGGAGA-T--GCTTTCCCC---ACAGCAATAAAGTCCTGA-TTG----------G-----------------------------------------------GCCA-CA---------T------AAAT--------------G-----AAATATATATATATGT-ACATTTGATTCTCTT-TTG--------ACTTTATTC--------AAAT--TGATGA---------------------------------------GGGG-TTTCGGTGAT-TGAAGATCGCCCAACGAAGG--ATGTGCGCCTCGTTT-T
droTak1 scf7180000414373:10226-10543 - TTCGCAGCAACTCCGCCGGCCAAATTGGCTTCCTGCGTCTTCCCAATCGGGTTTGTGTGGCGCTTTCTCGCGCCCGCTGGGCCCTCTACATCATTGGGAATCTGGAGATGCTAGAGAAGTCCTACCCGAATCTTTGGAGCCCCATTGCCAAGCGTTTGGA-GGAGAGCCACGCCATTGGAGA-G--ACTTTTCCC---ACAATAAACAGTGCCTGA-TAG----------G-------------------------------------------------GA-AA---------T------AATA--------------A-----C--AATTTAAGCATGT-ACATTTGATTCTCTC-TTG--------ACTTTATTT--------ATAT--TGATGA---------------------------------------GGGGTTTTTGGTGAT-TGAAGATCGCCAAAC-G-----ATGTGCGCCTCGT----
droEug1 scf7180000409798:365037-365340 - TACGTAGCAATCCGTCCGGCCAAATTGGATTTCTGCGTCTTCAAAATCGGGTGTGTGTGGCCCTATCTCGTGCCCGTTGGGGTCTGTACATCATTGGGAATCTAGAGATGTTGAAGAAATCCTACCCAAAGCTTTGGTGTCCCATTGCCAAGCGTTTGGA-AGATAACTGCGCCGTTGGCGA-G--ATTTTTCCC---ACTAA-------------------------------------------------------------------------------------------T------AATT--------------A----------AATGTGTAAAT-ACATTTGATTCTCTT-TTG--------ACTTTATTTTTATGC--GTAT--TGATGA---------------------------------------GGGG-TTTCGGTGATTTGAAGATTGCCTGCC-G-----ATGTGCGCCTCGTTAAT
dm3 chr3R:20022365-20022682 + TGCGCAGCAATATATCCGGCCGAATTGGCTTCCTTCGCCAAGCAAATCGAGTGTGCGTGGCTCTTTCTCGAGCCCGCTGGGCCCTGTACATCGTCGGTAATGTGACGATTTTGAAGGATACCTTCCCAAAGATTTGGAATCCAATTGTCAAGCGCTTGAA-AGAGAATAATGCCATCGGAGA-G--GCATTTCCG---ACCATAACCAGTACCTGA-TTA------------------------------------------------------------CA-AC---------T------AATT--------------A-----AAAAATGTATATATGT-ACATTTGATTTTCTG-TTG--------ATTTTATTT--------ATTT--TGATGA---------------------------------------GGGG-TTTCGGTGAT-TGAAGATCGCTTGCC-G-----ATTTGCGCCTCGT----
droSim2 3r:19559642-19559960 + TGCGGAGCAATCTATCCGGCCGAATTGGCTTCCTTCACCAAGCAAATCGGGTGTGCGTGGCTCTTTCTCGAGCCCGCTGGGCTCTGTACATCGTCGGTAATATGACGATTTTGGAGGATTCCTTCCCAAAGATTTGGAGCCCAATTGTCAAGCGCTTGAA-AGAGAATAATGCCATCGGAGA-G--GCATTTCCG---ACCATAATCAGTACCTGA-TTA------------------------------------------------------------CA-CC---------T------AATT--------------A-----AAAAATGTTGATATGTGACATTTGATTTTCTG-TTG--------ATTTTATTT--------AGTT--TGATGA---------------------------------------GGGG-TTTCAGTGAT-TGAAGATCGCTTGCC-G-----ATGTGCGCCTCGT----
droSec2 scaffold_0:20360048-20360366 + TGCGGAGCAATCTATCCGGCCGAATTGGCTTCCTTCACCAAGCAAATCGGGTGTGCGTGGCTCTTTCTCGAGCCCGCTGGGCTCTGTACATCGTCGGTAATATGACGATTTTGGAGGATTCCTTCCCAAAGATTTGGAACCCAATTGTCAAGCGCTTGAA-AGAGAATAATGCCATCGGAGA-G--GCATTTCCG---ACCATAATCAGTACCTGA-TTA------------------------------------------------------------CA-CC---------T------AATT--------------A-----AAAAATGTAGATATGTGACATTTGATTTTCTG-TTG--------ATTTTATTT--------AGTT--TGATGA---------------------------------------GGGG-TTTCAGTGAT-TGAAGATCGCTTGCC-G-----ATGTGCGCCTCGT----
droYak3 3R:26480101-26480413 - TGCGCAGCAATGCGTCCGGCCAAATTGGCTTCCTTCGCCTAGCCAATCGGGTGTGTGTGGCTCTTTCTCGAGCTCGCTGGGCGCTGTACATCGTCGGTAACCTGGAGATGTTGCAACAATCCTACCCAAAGCTTTGGAGCCCAATTGCCCAGCGTTTGGA-AGAGAACAATGCCATCGGCGA-G--GCTTTTCCG---TTC------AGTACCTGA-TTA----------C-------------------------------------------------CA-AG---------T------AATT--------------A-----AAATATGTTTATATGT-ACATTTGATTTTCTC-TTG--------ACTTTATTT--------ATTT--TGATGA---------------------------------------GGGG-TTTCGGTGAT-TGAAGTTCGCCTGCC-G-----ATGTGCGCCTCGT----
droEre2 scaffold_4820:8034972-8035300 - TGCGCAGCAATCCGTCCGGCCAAATTGGCTTCCTTCGTCTAGCCAATCGGGTGTGTGTGGCTCTTTCTCGAGCCCGCTGGGCTCTGTACATCATCGGGAATCTGGAGATGTTGCAGCAATCCTACCCAAAGCTTTGGAACCCTATTGCACAGCGTTTGGA-AGAGAACAATGCCATCGGCGA-G--GCTTTTCCG---ACAAAATAAAGTACCTAA-TTAACGTATGTAAC-------------------------------------------------CA-AC---------T------AATT--------------A-----ATATTTGTATATATGT-ACATTTGATTTTCTC-TTG--------ACTTTATTT--------ATTT--TGATGA---------------------------------------GGGG-TTTCGGTGAT-TGAAGATCGCCTGCC-G-----ATGTGCGCCTCGT----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGCGCAGTAATTCCAAGGGACAGATAGGTTTCTTGCGCCAGCCGAATCGTGTATGTGTTGCTCTATCCAGAGCACGAAGGGGCCTCTATATAGTCGGAGATATAGAAACACTGCAGCGAGGCAATCGTGAACTCTGGGGAAGAATTTGCCAGCAACTAAA-CGAAGACAATGCAATTGGTGA-A--AAGTTCCCT---T-GGCAAACAAACTTTGA-AAA----------T-------------------------------------------------------------------GTA--AA-----------------------ACTATAG-ATTAC-ACTGTGGTTTC-----TTTATACTTCTTGTTTTTT---ATTT--ATAT--AGAG-A---------------------------------------TGA--GTTCGCTAAA-CGAAGATTGCTTGCT-ATGTACGTGCACGCCTCGT----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................GAG-A---------------------------------------TGA--GTTCGCTAAA-CGAA...................................2112.00201001
.................................................................................................................................................TTGCCAGCAACTAAA-CGAAGACAA..................................................................................................................................................................................................................................................................................................................................2412.00200200
.....................................................................................................................GAGGCAATCGTGAACTCTGGGGA................................................................................................................................................................................................................................................................................................................................................................2312.00200200
.......................................................................................................................GGCAATCGTGAACTCTGGGGA................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................TA--AA-----------------------ACTATAG-ATTAC-ACTGT.................................................................................................................................................2111.00101000
.................................................................................................................................AACTCTGGGGAAGAATTTGCCAGCAAC................................................................................................................................................................................................................................................................................................................................................2711.00100100
.................................................................TCCAGAGCACGAAGGGGCC........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
...............................................................................................................................................................A-CGAAGACAATGCAATTGGTG.......................................................................................................................................................................................................................................................................................................................2111.00101000
.........................................................................................ATAGTCGGAGATATAGAAA................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCT-ATGTACGTGCACGC.........2011.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................TT---ATTT--ATAT--AGAG-A---------------------------------------TGA--GTTC..............................................2211.00100100
.............................TTCTTGCGCCAGCCGAATCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................CGTGAACTCTGGGGAAGAATT..........................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................................................................................................................GAGGCAATCGTGAACTCTGGG..................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................TCTTGCGCCAGCCGAATCGTGTATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
......GTAATTCCAAGGGACAGATAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.GCGCAGTAATTCCAAGGGACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCTAAA-CGAAGATTGCTT...........................2211.00100100
...................................................................................................ATATAGAAACACTGCAGCGAG....................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................................................................................................................GTGAACTCTGGGGAAGAATTTGCCAG....................................................................................................................................................................................................................................................................................................................................................2611.00100100
................................................................................................................................................................................................................................................................................................................A-----------------------ACTATAG-ATTAC-ACTGTGGT..............................................................................................................................................2111.00101000
.............................................................................................................................................................AAA-CGAAGACAATGCAATTGGTGA-.....................................................................................................................................................................................................................................................................................................................2411.00100010
...................................................................................................................................................GCCAGCAACTAAA-CGAAGACAATG................................................................................................................................................................................................................................................................................................................................2411.00100001
......................................................................................................TAGAAACACTGCAGCGAGGCA.................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..........................................................................................................................AATCGTGAACTCTGGGGAAGAA............................................................................................................................................................................................................................................................................................................................................................2211.00100100
........AATTCCAAGGGACAGATAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..........................................................................................................................................................................................................CAAACAAACTTTGA-AAA----------T-------------------------------------------------------------------GT................................................................................................................................................................................................2011.00100100
............................................................................................................CACTGCAGCGAGGCAATCGTG...........................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCTTGCT-ATGTACGTGC.............2111.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................AGAG-A---------------------------------------TGA--GTTCGCTAAA-CG.....................................2011.00101000
..................................................................................................................................ACTCTGGGGAAGAATTTGCCA.....................................................................................................................................................................................................................................................................................................................................................2111.00100100
......................................................................................................................................................................................................................................................................................................................................................................................TTT---ATTT--ATAT--AGAG-A---------------------------------------TGA--GT................................................2111.00100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATTGCTTGCT-ATGTACG................2111.00101000
........................................................................................................................GCAATCGTGAACTCTGGGGAAGAATT..........................................................................................................................................................................................................................................................................................................................................................2611.00100100
.........................................................................................................................................................AACTAAA-CGAAGACAATGCA..............................................................................................................................................................................................................................................................................................................................2011.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTAAA-CGAAGATTGCTTG..........................2111.00101000
...............................................................TATCCAGAGCACGAAGGGGCCTCTATA..................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
........................................................................................................................................................................................................................................................................................................................................................................................T---ATTT--ATAT--AGAG-A---------------------------------------TGA--GTTC..............................................2111.00100100
............................................................................................................................................................................................................................................................................................................................................................................................ATTT--ATAT--AGAG-A---------------------------------------TGA--GTT...............................................1911.00100010
droVir3
TGCGCAGCAATCCGGCTGGGCAGATTGGCTTTCTACGTCAGCCAAATCGTGTTTGTGTCGCCCTATCGCGTGCCCGCTGGGCGCTCTACATGATGGGCAGCATGTCGACTCTGGAGCATGGCAATCCCCAACTCTGGGGAGCTATCCATAGCAAGCTAAT-TGCAGCAAATGCGATTGGTGA-C--GCCTTTCCC---GTGGCCAC-AGAGCACGA-AGA----------GATG----------------ATGCAGCAGA--------TCA---------CAACCTAGTTGGCAT------AAGC--------------GGCATTTTATATATATATATAT-ACATTAAATTA-----AACGTTTTATT--AAT-------TGT--T--------TG---TTTGCTTTTTAATCTA-------------------------------------------------------------GTCTTTTTTTT----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................A--------TCA---------CAACCTAGTTGGCAT------AAGC--------------GGC..........................................................................................................................................................................2612.002100000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................CAACCTAGTTGGCAT------AAGC--------------GG...........................................................................................................................................................................2112.002001000001000000000000000000000000000000000000000000000000000000
......................................................................................TACATGATGGGCAGCATGT...................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AACCTAGTTGGCAT------AAGC--------------GGC..........................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...................................CGTCAGCCAAATCGTGTTTGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................CAACTCTGGGGAGCTATCCAT.......................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................GAGCACGA-AGA----------GATG----------------ATGCA.............................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................AACTCTGGGGAGCTATCC.........................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
...................................................TTTGTGTCGCCCTATCGCGTGCCCG................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GGCAATCCCCAACTCTGGGGAGCTATC..........................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CAC-AGAGCACGA-AGA----------GATG----------------ATGCA.............................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.............................................ATCGTGTTTGTGTCGCCCTATCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
...........CCGGCTGGGCAGATTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................GAGCTATCCATAGCAAGCTAAT-...........................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................ATGTCGACTCTGGAGCATG....................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................AATCGTGTTTGTGTCGCCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GATG----------------ATGCAGCAGA--------TCA---------CAACCTAGTTG.........................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AGCAAATGCGATTGGTGA-C--GCC...............................................................................................................................................................................................................................................................................................................2211.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................ACTCTGGAGCATGGCAATCCC............................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AACTCTGGGGAGCTATCCATAGCAAGCT...............................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
..............................................TCGTGTTTGTGTCGCCCTATCGCGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATGGGCAGCATGTCGAC...............................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................CGCTGGGCGCTCTACATGATGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
................................................................ATCGCGTGCCCGCTGGGCGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TGGCCAC-AGAGCACGA-AGA----------G.....................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................GGCCAC-AGAGCACGA-AGA----------GAT...................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AAATGCGATTGGTGA-C--GCCTTT............................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
......................................................GTGTCGCCCTATCGCGTGCCCG................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................CGA-AGA----------GATG----------------ATGCAGCAGA--------TCA---------C...................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CACGA-AGA----------GATG----------------ATGCAGCAGA--------TCA---------....................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AGCAAGCTAAT-TGCAGCAAATGC...............................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......GCAATCCGGCTGGGCAGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................................................................ATG----------------ATGCAGCAGA--------TCA---------CAACCTAGTTG.........................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
.......CAATCCGGCTGGGCAGATTGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ACCTAGTTGGCAT------AAGC--------------GGCATTTTAT...................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CAGCAGA--------TCA---------CAACCTAGTTG.........................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
........AATCCGGCTGGGCAGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AATGCGATTGGTGA-C--GCCTTT............................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..............................................................CTATCGCGTGCCCGCTGGGCGCTCTA....................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...........................GCTTTCTACGTCAGCCAAATCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................ACATGATGGGCAGCATGTCG.................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................GAGCTATCCATAGCAAGCTA..............................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.................................................TGTTTGTGTCGCCCTATCGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................TTGGTGA-C--GCCTTTCCC---GTGG..................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................TTCTACGTCAGCCAAATCGTGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AGAGCACGA-AGA----------GATG----------------ATGCAGCA..........................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................GCAAGCTAAT-TGCAGCAAATGCGATT...........................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................GCCAAATCGTGTTTGTGTCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................CAAATCGTGTTTGTGTCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
............................................................................CTGGGCGCTCTACATGATGGG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................GCACGA-AGA----------GATG----------------ATGCAGCAGA--------TCA---------C...................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GATG----------------ATGCAGCAGA--------TCA---------C...................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................ATGGGCAGCATGTCGACTCTGGAGCAT.....................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..CGCAGCAATCCGGCTGGGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000100000000000000000000000000000000000
..................................................................................GCTCTACATGATGGGCAGCATGTC..................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CATTAAATTA-----AACGTTTTA.............................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................ATAT-ACATTAAATTA-----AACGTT................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................ATTGGTGA-C--GCCTTTCCC---GTGGCCA...............................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................GCCAC-AGAGCACGA-AGA----------GATG----------------ATGCAGCA..........................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................AAATGCGATTGGTGA-C--GCCTT.............................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AACCTAGTTGGCAT------AAGC--------------GGCATTTT.....................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................TTTTATATATATATATAT-ACA...................................................................................................................................................2180.131001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGCGCAGCAATACGGCCGGAAAGATTGGATTTCTCGGATTACCGAACCGCGTTTGTGTGGCCCTATCGCGTGCTCGTTGGGGTCTCTATATGATTGGCAACATGGAGACGCTGCAGCAGGGCAGTTCCGAACTTTGGGGAGCTATCAATGCTAAGCTGCT-AGCAGCAAATGCTATAGGCCC-A--GTGTTTCCGTTGGCCACTGAAAGTACTCCT-TAG----------G--GAACCCATTTTGACAATGGCTATAAGCTGTTTGAATTATTATTGTGTTT-TG---------T------AAAT--------------A-----AAATACGTTGGTTTTT-CAATTTCTGT------------------------------------------ATG---TTTGCTTTTTAATCTAATTGCAGTTTTCTTTTCATTATTGA-TTTTTGTAAT-CAAAGTTCGCC----------------------GT----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................ATCGCGTGCTCGTTGGGGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......CAATACGGCCGGAAAGATTGGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.......................................................TGTGGCCCTATCGCGTGCTCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
TGCGCAGCAATTCGGCTGGTCAAATTGGTTTTCTGCGCCAGTTGAATCGTGTCTGTGTTGCATTGTCACGTGCTCGTTGCGCACTCTATATGATTGGCAACATGGAGACGCTGCAACGAGGCAATCAACAACTTTGGGGTGCCATCAATAGCAAACTGCA-AGCGGCGAATGCGATAGGTAC-G--GCATTCCCA---TGCATCAC-TGTGCCGAA-GAA----------AGTG-----G---TCAAAATGTCTAAAAAG--------TAACAATT----------ATTTGTCAT------AAAT--------------A-----AAAT---------------GTTTTTTTT-----TTT---TTTT-TTTTTTTTT----GTATCTTC--AAATG---TTTGTTTTTTAATCTAAACGCAC----------------------------------------AGGTTTTTGAATGAGTTTTCTTTCT----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................TT-TTTTTTTTT----GTATCTTC--A...................................................................................................2011.00110
.................................................................................................................................................................AGCGGCGAATGCGATAGGTAC-G--..................................................................................................................................................................................................................................................................................................................2211.00110
................................................................GTCACGTGCTCGTTGCGCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
dp5
TGCGCAGCAATCCGACCGGCCATATAGGGTTTCTGGCTAAGCCGAATCGTGCTTGTGTAGCTCTTTCCCGAGCACGCTGGGCGCTGTACATGATCGGGAACATGGAGACACTGCAGCAGGGCAACTCGGAGCTGTGGTCCGCGATAGCCGAACGTTTGGA-GGAAACCAATGCCATAGGCGA-T--GCATTTCCT---ATCGTAGTTCGTTCTACA-A-----------------------------------------------------------------AA---------T---AAA--AC-----------------------AAAGTTC-GTTAT-ACATTTGATTC-----TTGGTTTTATT--CGT------ATGT--ATGT--A---CGCATGA--------------GGGGGC--------------GGGG-TTTCTCTGAA-TGAAGATGGCCTGCC-C-----ATGTGCGCCTCGT----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................AACTCGGAGCTGTGGTCCGC..............................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
....................................................................................................CATGGAGACACTGCAGCAGGGCAAC...............................................................................................................................................................................................................................................................................................................................................................................2512.0020000000200
......................................................................................................................GGGCAACTCGGAGCTGTCA...................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................CGCTGGGCGCTGTACATGATCGGGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
............................GTTTCTGGCTAAGCCGAATCGTGCTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.......................................................................GCACGCTGGGCGCTGTACATGATC.............................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................................................GCTGTACATGATCGGGAACATGGAGA................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................................................................GTACATGATCGGGAACATGGA..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
........................................................................................................................................GTCCGCGATAGCCGAACGTTTGGA-GGA........................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..................................................................................................................................GCTGTGGTCCGCGATAGCCGAA....................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGAA-TGAAGATGGCCT...........................2011.0010100000000
...............................................................................................GGGAACATGGAGACACTGCAGCAGG....................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAA-TGAAGATGGCCTGCC-.......................1911.0010100000000
...................................................................................................................................................................AAACCAATGCCATAGGCGA-T--GC................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................CTTTCCCGAGCACGCTGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................GATAGCCGAACGTTTGGA-GG.........................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................GCTCTTTCCCGAGCACGCTGGGCGCTG......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
TGCGCAGCAATCCGACCGGCCATATAGGGTTTCTGGCTAAGCCGAATCGTGCTTGTGTAGCTCTTTCCCGAGCACGCTGGGCGCTGTACATGATCGGGAACATGGAGACACTGCAGCAGGGCAACTCGGAGCTGTGGTCCGCGATAGCCGAACGTTTGGA-GGAAACCAATGCCATAGGCGA-T--GCATTTCCT---ATCGTAGTTAGTTCTACA-A-----------------------------------------------------------------AA---------T---AAA--AC-----------------------AAAGTTC-GTTAT-ACATTTGATTC-----TTGGTTTTATT--CGT------ATGT--ATGT--A---CGCATGA--------------GGGGGC--------------GGGG-TTTCTCTGAA-TGAAGATGGCCTGCC-C-----ATGTGCGCCTCGT----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................GTCCGCGATAGCCGAACGTTTGGA-GGA........................................................................................................................................................................................................................................................................................................................................2711.001000001
.........................................................................................................................................................GTTTGGA-GGAAACCAATG................................................................................................................................................................................................................................................................................................................................1811.001010000
............................................................................................................CACTGCAGCAGGGCAACTCGGAGCT.......................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................CAACTCGGAGCTGTGGTCCG...............................................................................................................................................................................................................................................................................................................................................................2011.001100000
droAna3
TCCGAAGCAATTCCGCCGGCCAGATAGGATTCCTGCGGCAGCCGAACCGAGTATGTGTGGCCCTTTCCCGTGCCCGCTGGGCGCTCTATATAGCCGGGAACCTGGAGACGCTACAGAAGGGCAATCGCAAGTTGTGGGGCAGCATAGCTGAACGACTGGAAGGACAACAAT-CCATTGGACAAATAGGATTTCCG---ACAAA-----------------------------------------------------------------------------TA-AC---------T------AATG--------------A-----C----------ATTGT-AA-ATTGATTCACTT-TT------TTTACTTTATTA--------ATAA--TGATGA---------------------------------------GGGGATTTCGGTGAA-AAAAGATCGCCTGCC-A-----AT-TGCG----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCGCCTGCC-A-----AT-TGCG----------2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................TAA--TGATGA---------------------------------------GGGGATTTCGGT...........................................2111.001100000
...............................................................................................................................................ATAGCTGAACGACTGGAAGGAC.......................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA-AAAAGATCGCCTGCC-A-----AT-..............2111.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................ATAA--TGATGA---------------------------------------GGGGATTTCGG............................................2111.001000100
.........................................................................................................................CAATCGCAAGTTGTGGGGCAGC.............................................................................................................................................................................................................................................................................................................................................................2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGAA-AAAAGATCGCCTGC.........................2111.001100000
droBip1
TTCGGAGCAATTCTGCCGGTCAGATAGGATTTCTGCGTCAGCCGAACCGAGTGTGCGTAGCCCTTTCCCGCGCTCGCTGGGCCCTCTATATAGCCGGAAACATGGAGACGTTACAAAAGGGCAATCGAACCCTGTGGGGCAGCATAGCTGAACGATTAGAAAGACAACAATCCC-TTGGAAAAATTGCTTTTCCA---ATGA-------TTTCAGA-AAA----------A-------------------------------------------------AG-AC---------T------AAAA--------------A-----C------------AAT-GTAATTGATTCAGTTTTTC--------ACTTTATTA--------ATAA--TGATGA---------------------------------------GGGGATTTCGGTGAA-TAAAGATCGCCTGCC-A----------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGCGCAGCAATTCATCCGGTCAAATCGGGTTCCTGCGCCAACCCAATCGCGTGTGTGTGGCTCTTTCCCGAGCTCGCTGGGGTCTATATATCATTGGAAATCTGGAGATGCTGCAGCAAAGCGGCCAAAAGCTTTGGAAAACAATTGCCAATCATTTGGA-GGAGAATGCGGCAATTGGCGA-T--GCCTTTCCC---ACAGCATCCAGTGTCTAAGTTG------------------------------------------------------------CA-AA---------GAAAA--AAAT-----------------------ATAAAACGTTTGT-ACATTTGATTCTCTCTTTA--------CTTTTATTT--------ACTTTATGGTGA---------------------------------------GTGGGTTTCGATGAA-TGATGATCGCCT---------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGCGCAGCAATACGTCCGGCCAAATCGGTTTCCTGCGGCAACCGAATCGAGTGTGCGTCGCACTTTCTCGAGCCCGCTGGGCGCTGTATATTATTGGTAATCTAGAGATGTTGCAGCATTCCTACTCCAAACTTTGGAGTCCCATTGCAAAGCGTTTGAC-CGATAGCGCGGCCATTGGAGA-G--GCTTTTCCC---ACCATAACTTGTGCCTGA-CAA----------G-------------------------------------------------------------------TTT--ATACAGTTTATAGTATA-----G----TATGTGTATAT-ACATTTGATTCTC---TTT--------ACTTTATTT--------GTAT--CGATGA---------------------------------------GGGGTTTTTGGTGAA-TAAAGATCGTCTGAC-G-----ATGTGCG----------SizeHit CountTotal NormTotal
No Reads
droEle1
TGCGCAGCAATCCGTCCGGCCAAATTGGCTTTCTGCGACTTCCGAACCGCGTGTGTGTTGCTCTTTCTCGGGCACGCTGGGCACTTTATATCATCGGTAATCTGGAAATGTTGCAGCAGTCCTGTCCAAAGCTTTGGAGCCCCATTGCCAAGCGTTTGGG-GGAGAATGATTCCGTTGGAGA-G--GCTTTCCCG---ACAACATTTAATCTCTGT-TAA----------A-------------------------------------------------TA-AA---------T------AAAT--------------A-----A----AATGTGTATAT-ACGTTTGATTCTCTC-TTG--------ACTTTATTT--------GTAT--TGATGA---------------------------------------GGGG-TTTCGGTGAA-CAAAGATCGCCTGCC-GATGGTGTGTGCGCCTCGT----SizeHit CountTotal NormTotal
No Reads
droRho1
TCCGCAGCAATCCGTCCGGCCAAATTGGCTTTTTGAGACTTCCGAATCGAGTCTGTGTGGCTCTTTCTCGGGCCCGATGGGCTCTTTATATTATCGGTAATATAGAGAATTTGCAGAAATCCTACCCAAAGCTTTGGGGTCCCATTGCCAAACGTTTGAA-GGATAATAATGCCATTGGAGA-G--GCTTTCCCC---ATGT--------TACTG--------------------------------------------------------------------AA---------T------AATT--------------A-----A----TATGTATATAT-ACGTTTGATTCTCTC-TTG--------ACTTTATTT--------ATAT--TGATGA---------------------------------------AGGG-ATTCGGTGAA-TAAAGATCGCCG-CT-GATG--ATGTGCGCCTCTTT--TSizeHit CountTotal NormTotal
No Reads
droBia1
TTCGCAGCAATCCGTCTGGCCAAATAGGCTTTCTTTGTCTTCCCAATCGGGTTTGTGTGGCCCTTTCTCGCGCCCGCTGGGCCCTGTACATCATTGGGGATCTGGAGATGCTGCATAAGTCGTGCCCGAACCTTTGGAGCCCCATTGCCAAGCGTTTGGA-GGAGAACTCCGCCATTGGAGA-T--GCTTTCCCC---ACAGCAATAAAGTCCTGA-TTG----------G-----------------------------------------------GCCA-CA---------T------AAAT--------------G-----AAATATATATATATGT-ACATTTGATTCTCTT-TTG--------ACTTTATTC--------AAAT--TGATGA---------------------------------------GGGG-TTTCGGTGAT-TGAAGATCGCCCAACGAAGG--ATGTGCGCCTCGTTT-TSizeHit CountTotal NormTotal
No Reads
droTak1
TTCGCAGCAACTCCGCCGGCCAAATTGGCTTCCTGCGTCTTCCCAATCGGGTTTGTGTGGCGCTTTCTCGCGCCCGCTGGGCCCTCTACATCATTGGGAATCTGGAGATGCTAGAGAAGTCCTACCCGAATCTTTGGAGCCCCATTGCCAAGCGTTTGGA-GGAGAGCCACGCCATTGGAGA-G--ACTTTTCCC---ACAATAAACAGTGCCTGA-TAG----------G-------------------------------------------------GA-AA---------T------AATA--------------A-----C--AATTTAAGCATGT-ACATTTGATTCTCTC-TTG--------ACTTTATTT--------ATAT--TGATGA---------------------------------------GGGGTTTTTGGTGAT-TGAAGATCGCCAAAC-G-----ATGTGCGCCTCGT----SizeHit CountTotal NormTotal
No Reads
droEug1
TACGTAGCAATCCGTCCGGCCAAATTGGATTTCTGCGTCTTCAAAATCGGGTGTGTGTGGCCCTATCTCGTGCCCGTTGGGGTCTGTACATCATTGGGAATCTAGAGATGTTGAAGAAATCCTACCCAAAGCTTTGGTGTCCCATTGCCAAGCGTTTGGA-AGATAACTGCGCCGTTGGCGA-G--ATTTTTCCC---ACTAA-------------------------------------------------------------------------------------------T------AATT--------------A----------AATGTGTAAAT-ACATTTGATTCTCTT-TTG--------ACTTTATTTTTATGC--GTAT--TGATGA---------------------------------------GGGG-TTTCGGTGATTTGAAGATTGCCTGCC-G-----ATGTGCGCCTCGTTAATSizeHit CountTotal NormTotal
No Reads
dm3
TGCGCAGCAATATATCCGGCCGAATTGGCTTCCTTCGCCAAGCAAATCGAGTGTGCGTGGCTCTTTCTCGAGCCCGCTGGGCCCTGTACATCGTCGGTAATGTGACGATTTTGAAGGATACCTTCCCAAAGATTTGGAATCCAATTGTCAAGCGCTTGAA-AGAGAATAATGCCATCGGAGA-G--GCATTTCCG---ACCATAACCAGTACCTGA-TTA------------------------------------------------------------CA-AC---------T------AATT--------------A-----AAAAATGTATATATGT-ACATTTGATTTTCTG-TTG--------ATTTTATTT--------ATTT--TGATGA---------------------------------------GGGG-TTTCGGTGAT-TGAAGATCGCTTGCC-G-----ATTTGCGCCTCGT----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................AATAATGCCATCGGAGA-G--GCA...............................................................................................................................................................................................................................................................................................................21110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TACATCGTCGGTAATGTGACG.................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000100000000000000000000
...............................................................................................................................AAAGATTTGGAATCCAATTGTC.......................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-TGAAGATCGCTTGCC-G-----AT...............2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TGACGATTTTGAAGGATACCTT................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GCAAATCGAGTGTGCGTGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-TGAAGATCGCTTGCC-G-----AT...............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010
.........................................................................................................................................................................................................................................................................................................................................................................................T--------ATTT--TGATGA---------------------------------------GGGG-TTTCGG............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................TTTGGAATCCAATTGTCAAGC...................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................GAA-AGAGAATAATGCCATCGGAGA-G--GCAT..............................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CGGTAATGTGACGATTTTGAAGG.......................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CGAGTGTGCGTGGCTCTTTCTCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CGCCAAGCAAATCGAGTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TCCCAAAGATTTGGAATCCAATTGT........................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................CCTTCCCAAAGATTTGGAATCCAATTGTC.......................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................AGAGAATAATGCCATCGGAGA-.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GGCTTCCTTCGCCAAGCAAATCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ACCTTCCCAAAGATTTGGA..................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AGCCCGCTGGGCCCTGTACATC................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCGCCAAGCAAATCGAGTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................A-AGAGAATAATGCCATCGGAGA-G--G.................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCGAGCCCGCTGGGCCCTGTACC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTGCC-G-----ATTTGCGCCTCG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CTGTACATCGTCGGTAATGTG....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
..CGCAGCAATATATCCGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TT--------ATTT--TGATGA---------------------------------------GGGG-TTTCGG............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TCAAGCGCTTGAA-AGAGAATAATGCCATC...........................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................CCGCTGGGCCCTGTACATCGT..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-TTTCGGTGAT-TGAAGATCG..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AAGCAAATCGAGTGTGCGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................CAAAGATTTGGAATCCAATTG.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TACCTGA-TTA------------------------------------------------------------CA-AC---------T------AATT--------------A-----AAAAATG................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ATAATGCCATCGGAGA-G--GC................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.............................................................TCTTTCTCGAGCCCGCTGGGCCCTG......................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CGAGCCCGCTGGGCCCTGTACATCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CGCTGGGCCCTGTACATCGTC.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................AATGTGACGATTTTGAAGGAT.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAT-TGAAGATCGCTTGCC-G-----A................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATGA---------------------------------------GGGG-TTTCGGTGAT-TG.....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAT-TGAAGATCGCTTGCC-G-----T................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................TTCGCCAAGCAAATCGAGTGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................TTGTCAAGCGCTTGAA-AGAG.......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TCCAATTGTCAAGCGCTTGAA-AGAGAA.....................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CTTTCTCGAGCCCGCTGGGCCCTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CTGGGCCCTGTACATCGTCGG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AGTGTGCGTGGCTCTTTCTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TTTCGGTGAT-TGAAGATCGC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................TTGAA-AGAGAATAATGCCATCGGAG.......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATCGAGTGTGCGTGGCTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TTTCCG---ACCATAACCAGTACC.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TCCAATTGTCAAGCGCTTGAA-AGAG.......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TGGAATCCAATTGTCAAGCGC.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................AA-AGAGAATAATGCCATCGGA........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCTTGCC-G-----ATTTGCGCCT.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GATGA---------------------------------------GGGG-TTTCGGTGAT-TG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GAATCCAATTGTCAAGCG..................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......CAATATATCCGGCCGAATTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CCAAGCAAATCGAGTGTGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................T--TGATGA---------------------------------------GGGG-TTTCGGTGA.........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTGCC-G-----ATTTGCGCCTC......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GGTAATGTGACGATTTTGAAGGAT.....................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................CGAGTGTGCGTGGCTCTTTCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CG---ACCATAACCAGTACCTGA-TTA------------------------------------------------------------CA-AC---------T------A..............................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTTCGCCAAGCAAATCGAGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AATGTGACGATTTTGAAGGATACCT.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGCGGAGCAATCTATCCGGCCGAATTGGCTTCCTTCACCAAGCAAATCGGGTGTGCGTGGCTCTTTCTCGAGCCCGCTGGGCTCTGTACATCGTCGGTAATATGACGATTTTGGAGGATTCCTTCCCAAAGATTTGGAGCCCAATTGTCAAGCGCTTGAA-AGAGAATAATGCCATCGGAGA-G--GCATTTCCG---ACCATAATCAGTACCTGA-TTA------------------------------------------------------------CA-CC---------T------AATT--------------A-----AAAAATGTTGATATGTGACATTTGATTTTCTG-TTG--------ATTTTATTT--------AGTT--TGATGA---------------------------------------GGGG-TTTCAGTGAT-TGAAGATCGCTTGCC-G-----ATGTGCGCCTCGT----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................TGACGATTTTGGAGGATTCCTTCCCAA...........................................................................................................................................................................................................................................................................................................................................................................2713.00300000030000000000
..............................................................................................................................................AATTGTCAAGCGCTTGAA-A..........................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
..........................................................................................................................................................................TGCCATCGGAGA-G--GCATTTCCG---ACCA..................................................................................................................................................................................................................................................................................................2611.00100000000001000000
..................................................................................................AATATGACGATTTTGGAGGAT.....................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....................................................................................................................................TTTGGAGCCCAATTGTCAAGCGCTTGAA-...........................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
............................................................................................................................................................TGAA-AGAGAATAATGCCATCGGAGA-G--GC................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.......................................AAGCAAATCGGGTGTGCGTGGCTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
........................TTGGCTTCCTTCACCAAGCAAATCGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.............................................................................................................TTTGGAGGATTCCTTCCCAAAG.........................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
............................................................................................................................................CCAATTGTCAAGCGCTTGAA-AGAGAA.....................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
............TATCCGGCCGAATTGGCTTCCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................GTTGATATGTGACATTTGAAA............................................................................................................................................2111.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................TTGATATGTGACATTTGAAA............................................................................................................................................2030.33100100000000000000
droSec2
TGCGGAGCAATCTATCCGGCCGAATTGGCTTCCTTCACCAAGCAAATCGGGTGTGCGTGGCTCTTTCTCGAGCCCGCTGGGCTCTGTACATCGTCGGTAATATGACGATTTTGGAGGATTCCTTCCCAAAGATTTGGAACCCAATTGTCAAGCGCTTGAA-AGAGAATAATGCCATCGGAGA-G--GCATTTCCG---ACCATAATCAGTACCTGA-TTA------------------------------------------------------------CA-CC---------T------AATT--------------A-----AAAAATGTAGATATGTGACATTTGATTTTCTG-TTG--------ATTTTATTT--------AGTT--TGATGA---------------------------------------GGGG-TTTCAGTGAT-TGAAGATCGCTTGCC-G-----ATGTGCGCCTCGT----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGCC-G-----ATGTGCGCCTCGT----2111.0010001
...........................................AAATCGGGTGTGCGTGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGTGAT-TGAAGATCGCTTGCC-G-----ATG..............2811.0011000
..........................GGCTTCCTTCACCAAGCAAATCGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
droYak3
TGCGCAGCAATGCGTCCGGCCAAATTGGCTTCCTTCGCCTAGCCAATCGGGTGTGTGTGGCTCTTTCTCGAGCTCGCTGGGCGCTGTACATCGTCGGTAACCTGGAGATGTTGCAACAATCCTACCCAAAGCTTTGGAGCCCAATTGCCCAGCGTTTGGA-AGAGAACAATGCCATCGGCGA-G--GCTTTTCCG---TTC------AGTACCTGA-TTA----------C-------------------------------------------------CA-AG---------T------AATT--------------A-----AAATATGTTTATATGT-ACATTTGATTTTCTC-TTG--------ACTTTATTT--------ATTT--TGATGA---------------------------------------GGGG-TTTCGGTGAT-TGAAGTTCGCCTGCC-G-----ATGTGCGCCTCGT----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................TGGAGCCCAATTGCCCAGCGTTTGGA-A..........................................................................................................................................................................................................................................................................................................................................2711.00100000010000
droEre2
TGCGCAGCAATCCGTCCGGCCAAATTGGCTTCCTTCGTCTAGCCAATCGGGTGTGTGTGGCTCTTTCTCGAGCCCGCTGGGCTCTGTACATCATCGGGAATCTGGAGATGTTGCAGCAATCCTACCCAAAGCTTTGGAACCCTATTGCACAGCGTTTGGA-AGAGAACAATGCCATCGGCGA-G--GCTTTTCCG---ACAAAATAAAGTACCTAA-TTAACGTATGTAAC-------------------------------------------------CA-AC---------T------AATT--------------A-----ATATTTGTATATATGT-ACATTTGATTTTCTC-TTG--------ACTTTATTT--------ATTT--TGATGA---------------------------------------GGGG-TTTCGGTGAT-TGAAGATCGCCTGCC-G-----ATGTGCGCCTCGT----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................ATTGCACAGCGTTTGGA-AGA........................................................................................................................................................................................................................................................................................................................................2011.0010010000

Generated: 05/18/2015 at 04:31 AM