ID:

dwi_2452

 Coordinate:

scf2_1100000004902:2663374-2663524 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.8 -6.0 -5.9 -5.9

Flybase annnotation

CDS [Dwil\GK11687-cds]; exon [dwil_GLEANR_11874:2]; intron [Dwil\GK11687-in]; Antisense to intron [Dwil\GK11399-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGGCACCACCTACAAGGTGACCGGCCTAAACGCTAAAGGTCTTCCTGGTGTCAGTCTAAAAATCTAAAGAGGCTCTAGCTATCTATATAAACGTAATCATATTGTTAATAGTTTTTGATCTATTAAATATAATACATATATATTTTCTATAAAACTTTCCGCATCTAATCAATTTGTTTGCTTGATTGATAAATTGACAGTTTCTCAATACACAAACAAAGCATCAAATAGGGCAAGTAAATAGTCATTT
****************************************************************.............................((..........(((((((........)))))))))************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 V117
male body		 M020
head
 M045
female body
 V119
head
..............................................................................................................AGTTTTTGATCTATTAAAT.......................................................................................................................... 19 0 1 43.00 43 40 0 3 0 0
...............................................................................................................GTTTTTGATCTATTAAAT.......................................................................................................................... 18 0 1 7.00 7 7 0 0 0 0
................................................................CTAAAGAGGCTCTAGCTAT........................................................................................................................................................................ 19 0 1 4.00 4 4 0 0 0 0
................................GCTAAAGGTCTTCCTGGTGTC...................................................................................................................................................................................................... 21 0 1 4.00 4 3 1 0 0 0
.........................................CTTCCTGGTGTCAGTCTAAA.............................................................................................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0
......................................................GTCTAAAAATCTAAAGAGG.................................................................................................................................................................................. 19 0 1 3.00 3 2 1 0 0 0
.................................CTAAAGGTCTTCCTGGTGTC...................................................................................................................................................................................................... 20 0 1 3.00 3 2 1 0 0 0
..................................TAAAGGTCTTCCTGGTGTC...................................................................................................................................................................................................... 19 0 1 3.00 3 2 1 0 0 0
..................................................GTCAGTCTAAAAATCTAAAGAGG.................................................................................................................................................................................. 23 0 1 3.00 3 2 1 0 0 0
.....................CCGGCCTAAACGCTAAAGGT.................................................................................................................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0
.............................................................AATCTAAAGAGGCTCTAGCT.......................................................................................................................................................................... 20 0 1 3.00 3 2 1 0 0 0
..............................................................ATCTAAAGAGGCTCTAGCT.......................................................................................................................................................................... 19 0 1 3.00 3 3 0 0 0 0
......................CGGCCTAAACGCTAAAGGT.................................................................................................................................................................................................................. 19 0 1 2.00 2 2 0 0 0 0
........ACCTACAAGGTGACCGGCCTAAACGC......................................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 2 0 0
...............................................................................................................GTTTTTGATCTATTAAATA......................................................................................................................... 19 0 1 2.00 2 1 0 0 1 0
.....................CCGGCCTAAACGCTAAAGGTC................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0
........ACCTACAAGGTGACCGGC................................................................................................................................................................................................................................. 18 0 1 2.00 2 0 0 2 0 0
......................................................GTCTAAAAATCTAAAGAG................................................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0
.............................................................AATCTAAAGAGGCTCTAGC........................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0
..............................................................ATCTAAAGAGGCTCTAGCTAT........................................................................................................................................................................ 21 0 1 2.00 2 0 1 0 1 0
.........................................CTTCCTGGTGTCAGTCTAAAA............................................................................................................................................................................................. 21 0 1 2.00 2 1 1 0 0 0
................................................................CTAAAGAGGCTCTAGCTATC....................................................................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0
........................................................CTAAAAATCTAAAGAGGC................................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0
..............................................................................................................AGTTTTTGATCTATTAAATA......................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
...................................AAAGGTCTTCCTGGTGTC...................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
................GGTGACCGGCCTAAACGCTAAAG.................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...........................................................AAAATCTAAAGAGGCTCTAGCT.......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................TGCTTGATTGATAAATTGAC.................................................... 20 0 1 1.00 1 0 0 1 0 0
.........................................................................................AAACGTAATCATATTGTTAATA............................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
..............................................................................................................AGTTTTTGATCTATTAAATATA....................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.............................................................................AGCTATCTATATAAACGT............................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
.........................................CTTCCTGGTGTCAGTCTAAAAATCTA........................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
.....................................................AGTCTAAAAATCTAAAGAGG.................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................................AAACAAAGCATCAAATAGGGC................ 21 0 1 1.00 1 1 0 0 0 0
............................................CCTGGTGTCAGTCTAAAAA............................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
................................GCTAAAGGTCTTCCTGGTGTCA..................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.........................................................TAAAAATCTAAAGAGGCTCTAGCT.......................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
......................................................................................TATAAACGTAATCATATTGTT................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................AATTTGTTTGCTTGATTGATA........................................................... 21 0 1 1.00 1 1 0 0 0 0
.........CCTACAAGGTGACCGGCCT............................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
..........CTACAAGGTGACCGGCCTAAACGCTAA...................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.......................GGCCTAAACGCTAAAGGT.................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
..............................................................................................................AGTTTTTGATCTATTAGAT.......................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
........................................................CTAAAAATCTAAAGAGGCTCTAGCTAT........................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.........................................CTTCCTGGTGTCAGTCTAAAAATCT......................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................................CTTCCTGGTGTCAGTCTAAAAAT........................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................................TCTAGCTATCTATATAAAC.............................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
.....ACCACCTACAAGGTGACCGGCCTAAACGC......................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
...................GACCGGCCTAAACGCTAAA..................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
......................................................................................TTTGAACGTAATCATATTTTTAATA............................................................................................................................................ 25 3 1 1.00 1 0 0 1 0 0
..........CGATAAGGTGACCGGCCT............................................................................................................................................................................................................................... 18 2 1 1.00 1 0 0 0 1 0
..................................................GTCAGTCTAAAAATCTAAAGAGGCT................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
............................................................................................CGTAATCATATTGTTAAT............................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
..............................................................................................................AGTTTTTGATCTATTAAATAT........................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
........ACCTACAAGGTGACCGGCCTAAACGCT........................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
............................................CCTGGTGTCAGTCTAAAAATC.......................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1
....................................................CAGTCTAAAAATCTAAAGAGGCT................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
..............AGGGTGACCGGCCTAAACGCT........................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................................TAGTTTTTGATCTATTAAAT.......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................ATAAACGTAATCATATTGTT................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................CATATTGTTAATAGTTTTTGATCTAT............................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................CTAAAGGTCTTCCTGGTGTCAGTCT................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
...................................................................................CTATATAAACGTAATCATATT................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
......CCACCTACAAGGTGACCGGCCTAAAC........................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
...............................CGCTAAAGGTCTTCCTGGTGTC...................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
....................................................CAGTCTAAAAATCTAAAGAG................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
..........................................................AAAAATCTAAAGAGGCTCTAGCTATCT...................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0
...................................................................................................................................................................................................................................AATAGGGCAAGTAAATAGT..... 19 0 1 1.00 1 0 1 0 0 0
..............................................................ATCTAAAGAGGCTCTAGC........................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
............................................................AAATCTAAAGAGGCTCTAGCTATC....................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..................................................................AAAGAGGCTCTAGCTATC....................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
.............................................................AATCTAAAGAGGCTCTAGCTAT........................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
.....ACCACCTACAAGGTGACCGGC................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0
........................GCCTAAACGCTAAAGGTC................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
.....................................................................................................ATTGTTAATAGTTTTTGATCTATT.............................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.................................................................................ATCTATATAAACGTAATCATATTGTT................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.................................CTAAAGGTCTTCCTGGTGTCA..................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................................TAGGGCAAGTAAATAGTC.... 18 0 1 1.00 1 1 0 0 0 0
.........................................................TAAAAATCTAAAGAGGCTCTAGC........................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
...................................................................................................ATATTTTTAATAGTTTTTGATCTA................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0
....................................................CAGTCTAAAAATCTAAAGAGG.................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.........................................CTTCCTGGTGTCAGTCTAAAAATCTAAA...................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.................................................................................ATCTATATAAACGTAATCATATT................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0
..........................................TTCCTGGTGTCAGTCTAAAAATCT......................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0
..........................................................AAAAATCTAAAGAGGCTCTAGCTAT........................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
.....................................................AGTCTAAAAATCTAAAGA.................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
...................GACCGGCCTAAACGCTAAAGGT.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
..............................................................................................................ATTTTTTGATCTATTAAAT.......................................................................................................................... 19 1 5 0.20 1 1 0 0 0 0
...............................................................................................................GTCTTTGATCTATTAAAT.......................................................................................................................... 18 1 5 0.20 1 1 0 0 0 0
...........................................................................CTAGCCATCTATAAAGACG............................................................................................................................................................. 19 3 17 0.12 2 0 0 2 0 0
..........CCGCAAGGTGCCCGGCCT............................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0
............................................................................................................................................................................................................................AGGACCAATTAGGGCAAGT............ 19 3 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

GACCGTGGTGGATGTTCCACTGGCCGGATTTGCGATTTCCAGAAGGACCACAGTCAGATTTTTAGATTTCTCCGAGATCGATAGATATATTTGCATTAGTATAACAATTATCAAAAACTAGATAATTTATATTATGTATATATAAAAGATATTTTGAAAGGCGTAGATTAGTTAAACAAACGAACTAACTATTTAACTGTCAAAGAGTTATGTGTTTGTTTCGTAGTTTATCCCGTTCATTTATCAGTAAA
**************************************************************************************************************************.............................((..........(((((((........)))))))))**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 M020
head
 M045
female body
............................................................................................................................................................................................CTATTTAACTGTCAAAGAGTTATGTGTTTG................................. 30 0 1 1.00 1 1 0 0
......................................................................................................................................................................................................................................TCCCGTTCATTTATCAGTAAA 21 0 1 1.00 1 0 1 0
....................................................................................................................................................................AGATTAGTTAAACAAACGAAC.................................................................. 21 0 1 1.00 1 0 0 1
............TGCTCCACTGGTCGGGTTTG........................................................................................................................................................................................................................... 20 3 3 0.33 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004902:2663324-2663574 + dwi_2452 CTGGCACCACCTACAAGGTGACCGGCCTAAACGCTAAAGGTCTTCCTGGTGTCAGTCTAAAAATCTAAAGA--GG-----CTC---TAGCTATC--TATATA---AACGTAATCA---------------------------------------------------TATTGTTAATAGTTTTTGATCTATTAAATATAATACATATATATTTTCTATAAAACTTTCCGCATCTAATCAATTTGTTTGCTTGATTGATAAATTGACAGTTTCTCAATACACAAACAAAGCATCAAATAGGGCAAGTAAATAGTCATTT
droVir3 scaffold_12472:199063-199130 + CTGGCACCACCTACAAGGTGACGGGTCTCAATGCCAAGGGCTATCCCGGCGTCAGCCTAAAGATCTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6359:3396098-3396168 + CCGGCACTACCTACAAAGTGACAGGACTCAATGCCAAGGGCTATCCAGGAGTTAACCTGAAGCTCTAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14853:6819666-6819736 - CTGGTACCACCTACAAGGTGACCGGTCTCAATGCCCGTGGCTATCCCGGCGTCAGTCTCAAGATCTAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:7619734-7619870 - CTGGCACCACCTACAAGGTGACCGGCCTCAATGCCAAGGGCCTGCCCGGTGTCCCCCTGAAGATCTAGATTAGATTATGTATA---TATT-ATATATGTATATAGATTGAATTCAATTAAATGTGGTAG-------------------------------ATTTTT---------------------GA-----------------------------------------TAAA-----------------------------------------------------------------------------------
droPer2 scaffold_0:1454243-1454311 - CTGGCACCACCTACAAGGTGACCGGCCTCAATGCCAAGGGCCTGCCCGGTGTCCCCCTGAAGATCTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13335:1465349-1465438 - CTGGCACCACCTTCAAGGTCACTGGGCTAAACGCCACCGGCTATCCCGGCGTGAACCTCAAGATCTAGGATCTGG-----CTC---TAGG-ATCTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396691:2815156-2815400 + CTGGCACTGTCTTCCAGGTGACGGGACTGAATTCCAAGGGTTTCCCTGGAGTCAGTTTGAAGGTATAGATTCAAAGCTATATACAATGACTTTT--AATAAA---AATAAGATTT---------------------------------------------------TAAATATTATGGTGTTTCATTGTTTATCTCCAATACCTGAATTATTTCTGCGGTA--------AATAGAATAGTATATAGGCTCCATTGATTA-CTGATAACATCCTTATATAGTAAC-------CCTAAATGACTGAATCATGCTTATTT
droKik1 scf7180000302586:126274-126343 + CTGGCACCACCTACAAGGTGACCGGCCTGAATGCCACCGGTTACCCCGGCGTCAATCTGAGGGTCTGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454077:2375878-2375944 + CTGGCACCACCTACAAGGTGACTGGCCTGAACGCCACTGGACTGCCCGGTGTCAACCTGAAGGTCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491023:1590695-1590779 + CTGGCACCACCTACAAGGTGACTGGCCTGAACGCCACCGGATTCCCAGGCGTCAACTTGAAGGTCTAGGAGCTGCAATC-------------TC--TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778057:36834-36986 + CTGGTACCACCTACCAGGTCACTGGTCTGAATGCCAAGGGTTACCCCGGCGTCAACTTGAAGATCTAAGTCAAAGACTA-------------TC--TGTATA---AAAGAGTTTAATTAAATAAGCAAGAGTGTACTTGTAAACTGAAGTGAT-----------------------------------------------ACAAATTTGCATTTTAT----------------A-----------------------------------------------------------------------------------
droBia1 scf7180000302402:3523090-3523158 - CTGGCACCACCTACCAGGTCACCGGTCTCAATGCCAAGGGTTACCCCGGCGTCAGCCTGAAGATCTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415351:69559-69628 - CTGGCACCACCTACAAGGTGACCGGCCTGAATGCCACCGGCTATCCCGGCGTCAACCTGAAGGTCTGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000407075:133160-133256 + CTGGCACCACTTACCAGGTCACTGGTCTCAATGCCAAGGGCTATGCCGGCGTCAATTTGAAGATCTAGATTTTAGAGTA-------------CT--TGTATA---ATAGCAATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:10571779-10571945 - CTGGTACCACCTTCCAGGTCACTGGGCTCAATGCCAAGGGTTACGCCGGCGTTAATTTGAAGATCTAGATTATAGACTA-------------CT--TGTATA---ATAGCATTTAATTAAATAATCAAACATTTACTTGTATACTGAACTAATGCAGTTGGTTTTT---------------------CT----------------------------CTTATTTTTGGCATTTA-----------------------------------------------------------------------------------
droSim2 3r:10638227-10638342 + CTGGCACCACCTTCCAGGTCACTGGGCTCAATGCCAAGGGTTTCGCCGGCGTTAGTTTGAAGATCTAGTTTGTAGACTA-------------CT--TGTATA---ATAGCATTTAATTAAATAATCAAACGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_0:11361793-11361908 + CTGGCACCACCTTCCAGGTCACTGGGCTCAATGCCAACGGTTTCGCCGGCGTTAGTTTGAAGATCTAGATTGTAGACTA-------------CT--TGTATA---ATAGCATTTAATTAAATAATCAAACGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 X:1941845-1941911 - CTGGCACCACCTACAAGGTGACCGGACTGAATGCCACTGGCTATCCCGGCGTCAACCTGAAGGTCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:14912603-14912669 - CTGGCACCACCTACAAGGTGACCGGCCTGAATGCCACTGGCTATCCCGGCGTCAACCTGAAGGTCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CTGGCACCACCTACAAGGTGACCGGCCTAAACGCTAAAGGTCTTCCTGGTGTCAGTCTAAAAATCTAAAGA--GG-----CTC---TAGCTATC--TATATA---AACGTAATCA---------------------------------------------------TATTGTTAATAGTTTTTGATCTATTAAATATAATACATATATATTTTCTATAAAACTTTCCGCATCTAATCAATTTGTTTGCTTGATTGATAAATTGACAGTTTCTCAATACACAAACAAAGCATCAAATAGGGCAAGTAAATAGTCATTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................AGTTTTTGATCTATTAAAT..........................................................................................................................19143.0043300400
.................................................................................................................................................................................GTTTTTGATCTATTAAAT..........................................................................................................................1817.00700070
................................................................CTAAAGA--GG-----CTC---TAGCTAT................................................................................................................................................................................................................................1914.00400040
................................GCTAAAGGTCTTCCTGGTGTC........................................................................................................................................................................................................................................................................2114.00400130
.........................................CTTCCTGGTGTCAGTCTAAA................................................................................................................................................................................................................................................................2013.00300030
......................................................GTCTAAAAATCTAAAGA--GG-----.............................................................................................................................................................................................................................................1913.00300120
.................................CTAAAGGTCTTCCTGGTGTC........................................................................................................................................................................................................................................................................2013.00300120
..................................TAAAGGTCTTCCTGGTGTC........................................................................................................................................................................................................................................................................1913.00300120
..................................................GTCAGTCTAAAAATCTAAAGA--GG-----.............................................................................................................................................................................................................................................2313.00300120
.....................CCGGCCTAAACGCTAAAGGT....................................................................................................................................................................................................................................................................................2013.00300030
.............................................................AATCTAAAGA--GG-----CTC---TAGCT..................................................................................................................................................................................................................................2013.00300120
..............................................................ATCTAAAGA--GG-----CTC---TAGCT..................................................................................................................................................................................................................................1913.00300030
......................CGGCCTAAACGCTAAAGGT....................................................................................................................................................................................................................................................................................1912.00200020
........ACCTACAAGGTGACCGGCCTAAACGC...........................................................................................................................................................................................................................................................................................2612.00220000
.................................................................................................................................................................................GTTTTTGATCTATTAAATA.........................................................................................................................1912.00201010
.....................CCGGCCTAAACGCTAAAGGTC...................................................................................................................................................................................................................................................................................2112.00200020
........ACCTACAAGGTGACCGGC...................................................................................................................................................................................................................................................................................................1812.00220000
......................................................GTCTAAAAATCTAAAGA--G...................................................................................................................................................................................................................................................1812.00200020
.............................................................AATCTAAAGA--GG-----CTC---TAGC...................................................................................................................................................................................................................................1912.00200020
..............................................................ATCTAAAGA--GG-----CTC---TAGCTAT................................................................................................................................................................................................................................2112.00201100
.........................................CTTCCTGGTGTCAGTCTAAAA...............................................................................................................................................................................................................................................................2112.00200110
................................................................CTAAAGA--GG-----CTC---TAGCTATC--.............................................................................................................................................................................................................................2012.00200110
........................................................CTAAAAATCTAAAGA--GG-----C............................................................................................................................................................................................................................................1812.00200020
................................................................................................................................................................................AGTTTTTGATCTATTAAATA.........................................................................................................................2011.00100100
...................................AAAGGTCTTCCTGGTGTC........................................................................................................................................................................................................................................................................1811.00100010
................GGTGACCGGCCTAAACGCTAAAG......................................................................................................................................................................................................................................................................................2311.00100010
...........................................................AAAATCTAAAGA--GG-----CTC---TAGCT..................................................................................................................................................................................................................................2211.00100010
.....................................................................................................................................................................................................................................................TGCTTGATTGATAAATTGAC....................................................2011.00110000
.....................................................................................................A---AACGTAATCA---------------------------------------------------TATTGTTAATA............................................................................................................................................2211.00100010
................................................................................................................................................................................AGTTTTTGATCTATTAAATATA.......................................................................................................................2211.00100010
.......................................................................................AGCTATC--TATATA---AACGT...............................................................................................................................................................................................................1811.00100010
.........................................CTTCCTGGTGTCAGTCTAAAAATCTA..........................................................................................................................................................................................................................................................2611.00100100
.....................................................AGTCTAAAAATCTAAAGA--GG-----.............................................................................................................................................................................................................................................2011.00100100
........................................................................................................................................................................................................................................................................................AAACAAAGCATCAAATAGGGC................2111.00100010
............................................CCTGGTGTCAGTCTAAAAA..............................................................................................................................................................................................................................................................1911.00100010
................................GCTAAAGGTCTTCCTGGTGTCA.......................................................................................................................................................................................................................................................................2211.00100010
.........................................................TAAAAATCTAAAGA--GG-----CTC---TAGCT..................................................................................................................................................................................................................................2411.00100010
..................................................................................................TATA---AACGTAATCA---------------------------------------------------TATTGTT................................................................................................................................................2111.00110000
.............................................................................................................................................................................................................................................AATTTGTTTGCTTGATTGATA...........................................................2111.00100010
.........CCTACAAGGTGACCGGCCT.................................................................................................................................................................................................................................................................................................1911.00110000
..........CTACAAGGTGACCGGCCTAAACGCTAA........................................................................................................................................................................................................................................................................................2711.00100010
.......................GGCCTAAACGCTAAAGGT....................................................................................................................................................................................................................................................................................1811.00100010
........................................................CTAAAAATCTAAAGA--GG-----CTC---TAGCTAT................................................................................................................................................................................................................................2711.00100010
.........................................CTTCCTGGTGTCAGTCTAAAAATCT...........................................................................................................................................................................................................................................................2511.00100010
.........................................CTTCCTGGTGTCAGTCTAAAAAT.............................................................................................................................................................................................................................................................2311.00100010
.................................................................................TC---TAGCTATC--TATATA---AAC.................................................................................................................................................................................................................1911.00100010
.....ACCACCTACAAGGTGACCGGCCTAAACGC...........................................................................................................................................................................................................................................................................................2911.00100010
...................GACCGGCCTAAACGCTAAA.......................................................................................................................................................................................................................................................................................1911.00100010
..................................................GTCAGTCTAAAAATCTAAAGA--GG-----CT...........................................................................................................................................................................................................................................2511.00100100
...........................................................................................................CGTAATCA---------------------------------------------------TATTGTTAAT.............................................................................................................................................1811.00100010
................................................................................................................................................................................AGTTTTTGATCTATTAAATAT........................................................................................................................2111.00100010
........ACCTACAAGGTGACCGGCCTAAACGCT..........................................................................................................................................................................................................................................................................................2711.00100100
............................................CCTGGTGTCAGTCTAAAAATC............................................................................................................................................................................................................................................................2111.00100001
....................................................CAGTCTAAAAATCTAAAGA--GG-----CT...........................................................................................................................................................................................................................................2311.00100100
...............................................................................................................................................................................TAGTTTTTGATCTATTAAAT..........................................................................................................................2011.00100010
...................................................................................................ATA---AACGTAATCA---------------------------------------------------TATTGTT................................................................................................................................................2011.00100010
.................................................................................................................CA---------------------------------------------------TATTGTTAATAGTTTTTGATCTAT...............................................................................................................................2611.00100010
.................................CTAAAGGTCTTCCTGGTGTCAGTCT...................................................................................................................................................................................................................................................................2511.00100100
.............................................................................................C--TATATA---AACGTAATCA---------------------------------------------------TATT...................................................................................................................................................2111.00100010
......CCACCTACAAGGTGACCGGCCTAAAC.............................................................................................................................................................................................................................................................................................2611.00110000
...............................CGCTAAAGGTCTTCCTGGTGTC........................................................................................................................................................................................................................................................................2211.00100100
....................................................CAGTCTAAAAATCTAAAGA--G...................................................................................................................................................................................................................................................2011.00100100
..........................................................AAAAATCTAAAGA--GG-----CTC---TAGCTATC--T............................................................................................................................................................................................................................2711.00101000
.....................................................................................................................................................................................................................................................................................................AATAGGGCAAGTAAATAGT.....1911.00100100
..............................................................ATCTAAAGA--GG-----CTC---TAGC...................................................................................................................................................................................................................................1811.00100010
............................................................AAATCTAAAGA--GG-----CTC---TAGCTATC--.............................................................................................................................................................................................................................2411.00100100
..................................................................AAAGA--GG-----CTC---TAGCTATC--.............................................................................................................................................................................................................................1811.00100010
.............................................................AATCTAAAGA--GG-----CTC---TAGCTAT................................................................................................................................................................................................................................2211.00100100
.....ACCACCTACAAGGTGACCGGC...................................................................................................................................................................................................................................................................................................2111.00110000
........................GCCTAAACGCTAAAGGTC...................................................................................................................................................................................................................................................................................1811.00100010
.......................................................................................................................................................................ATTGTTAATAGTTTTTGATCTATT..............................................................................................................................2411.00100010
...........................................................................................ATC--TATATA---AACGTAATCA---------------------------------------------------TATTGTT................................................................................................................................................2611.00100010
.................................CTAAAGGTCTTCCTGGTGTCA.......................................................................................................................................................................................................................................................................2111.00100100
.......................................................................................................................................................................................................................................................................................................TAGGGCAAGTAAATAGTC....1811.00100010
.........................................................TAAAAATCTAAAGA--GG-----CTC---TAGC...................................................................................................................................................................................................................................2311.00100100
....................................................CAGTCTAAAAATCTAAAGA--GG-----.............................................................................................................................................................................................................................................2111.00100010
.........................................CTTCCTGGTGTCAGTCTAAAAATCTAAA........................................................................................................................................................................................................................................................2811.00100010
...........................................................................................ATC--TATATA---AACGTAATCA---------------------------------------------------TATT...................................................................................................................................................2311.00101000
..........................................TTCCTGGTGTCAGTCTAAAAATCT...........................................................................................................................................................................................................................................................2411.00101000
..........................................................AAAAATCTAAAGA--GG-----CTC---TAGCTAT................................................................................................................................................................................................................................2511.00100010
.....................................................AGTCTAAAAATCTAAAGA--....................................................................................................................................................................................................................................................1811.00100010
...................GACCGGCCTAAACGCTAAAGGT....................................................................................................................................................................................................................................................................................2211.00100100
droVir3
CTGGCACCACCTACAAGGTGACGGGTCTCAATGCCAAGGGCTATCCCGGCGTCAGCCTAAAGATCTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................GACGGGTCTCAATGCCAAGGGCT...................................................................................................................................................................................................................................................................................2318.008002000000000000000010010000000000000000000000000000000000000040
..........................................ATCCCGGCGTCAGCCTAAAGAT.............................................................................................................................................................................................................................................................2213.003000000000000000001100010000000000000000000000000000000000000000
.........................................TATCCCGGCGTCAGCCTAAA................................................................................................................................................................................................................................................................2012.002000000000000000001000010000000000000000000000000000000000000000
....CACCACCTACAAGGTGACGGGT...................................................................................................................................................................................................................................................................................................2212.002000000000000000010100000000000000000000000000000000000000000000
...................GACGGGTCTCAATGCCAAGGG.....................................................................................................................................................................................................................................................................................2112.002001000000000000100000000000000000000000000000000000000000000000
....CACCACCTACAAGGTGACGGGTCT.................................................................................................................................................................................................................................................................................................2412.002000000000000000101000000000000000000000000000000000000000000000
..GGCACCACCTACAAGGTGACGGGT...................................................................................................................................................................................................................................................................................................2412.002000000000000000000000020000000000000000000000000000000000000000
...................GACGGGTCTCAATGCCAAG.......................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................ATCCCGGCGTCAGCCTAAAGA..............................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
................................GCCAAGGGCTATCCCGGCGTCAGC.....................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
........................................CTATCCCGGCGTCAGCCTAAA................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.........................................TATCCCGGCGTCAGCCTAAAGAT.............................................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
...................................AAGGGCTATCCCGGCGTCAGCCTA..................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
......................GGGTCTCAATGCCAAGGGCT...................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
........................GTCTCAATGCCAAGGGCTATCCCGG............................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........................TCAATGCCAAGGGCTATCCCGGCGT.........................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................GTGACGGGTCTCAATGCCAAGGGCT...................................................................................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
...GCACCACCTACAAGGTGACG......................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................CGTCAGCCTAAAGATCTA..........................................................................................................................................................................................................................................................1811.001000000000000000000100000000000000000000000000000000000000000000
..........CTACAAGGTGACGGGTCTC................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
..................................CAAGGGCTATCCCGGCGTC........................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
........................................CTATCCCGGCGTCAGCCTAAAGAT.............................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
..................................CAAGGGCTATCCCGGCGTCAGC.....................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
...............................TGCCAAGGGCTATCCCGGCGTCAGCCT...................................................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
..........................................ATCCCGGCGTCAGCCTAAAG...............................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.......CACCTACAAGGTGACGGGTCT.................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................AGGGCTATCCCGGCGTCAGCCTAAAGATCT...........................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000000010
...GCACCACCTACAAGGTGACGGGT...................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............AAGGTGACGGGTCTCAATGC...........................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.....................CGGGTCTCAATGCCAAGGGCT...................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
..................................CAAGGGCTATCCCGGCGTCA.......................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
...................................AAGGGCTATCCCGGCGTCA.......................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
...........TACAAGGTGACGGGTCTCAA..............................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
........................GTCTCAATGCCAAGGGCTATC................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....ACCACCTACAAGGTGACGGGTCT.................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..............................ATGCCAAGGGCTATCCCGGCGT.........................................................................................................................................................................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
.................................CCAAGGGCTATCCCGGCGTCA.......................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.........................................TATCCCGGCGTCAGCCTAAAGATC............................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
....................................AGGGCTATCCCGGCGTCAG......................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
........................GTCTCAATGCCAAGGGCTATCCCGGCGTC........................................................................................................................................................................................................................................................................2911.001000000000000000010000000000000000000000000000000000000000000000
.............................AATGCCAAGGGCTATCCCGGCG..........................................................................................................................................................................................................................................................................2211.001000000000000000010000000000000000000000000000000000000000000000
..........................CTCAATGCCAAGGGCTATCCCGGCGT.........................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
...GCACCACCTACAAGGTGACGG.....................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................CAAGGGCTATCCCGGCGTCAGCCTAAA................................................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
..........................CTCAATGCCAAGGGCTATCCCGGC...........................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................TATCCCGGCGTCAGCCTAAAG...............................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................AATGCCAAGGGCTATCCCGGCGTCAGC.....................................................................................................................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
.......................................GCTATCCCGGCGTCAGCCTAAAGATC............................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
CCGGCACTACCTACAAAGTGACAGGACTCAATGCCAAGGGCTATCCAGGAGTTAACCTGAAGCTCTAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................GACAGGACTCAATGCCAAGGGCT...................................................................................................................................................................................................................................................................................2315.005000005
..............AAAGTGACAGGACTCAATGCCAAGGGCT...................................................................................................................................................................................................................................................................................2812.002000002
...................GACAGGACTCAATGCCAAGGGC....................................................................................................................................................................................................................................................................................2212.002200000
..............................ATGCCAAGGGCTATCCAGG............................................................................................................................................................................................................................................................................1911.001000100
....CACTACCTACAAAGTGACAGGACT.................................................................................................................................................................................................................................................................................................2411.001100000
...GCACTACCTACAAAGTGACAGGACT.................................................................................................................................................................................................................................................................................................2511.001100000
....................ACAGGACTCAATGCCAAGGGC....................................................................................................................................................................................................................................................................................2111.001100000
..............AAAGTGACAGGACTCAATGCCAAGGG.....................................................................................................................................................................................................................................................................................2611.001100000
...................GACAGGACTCAATGCCAAGGGCTAT.................................................................................................................................................................................................................................................................................2511.001000001
......................AGGACTCAATGCCAAGGGCTATCCAGG............................................................................................................................................................................................................................................................................2711.001100000
.....ACTACCTACAAAGTGACAG.....................................................................................................................................................................................................................................................................................................1911.001100000
.......TACCTACAAAGTGACAGGACTCAAT.............................................................................................................................................................................................................................................................................................2511.001100000
.........................ACTCAATGCCAAGGGCTATCCA..............................................................................................................................................................................................................................................................................2211.001001000
...................GACAGGACTCAATGCCAAGGGCTATCCA..............................................................................................................................................................................................................................................................................2811.001100000
............................CAATGCCAAGGGCTATCCAGG............................................................................................................................................................................................................................................................................2111.001100000
.............CAAAGTGACAGGACTCAATGCCAAGGGCT...................................................................................................................................................................................................................................................................................2911.001100000
................AGTGACAGGACTCAATGCCAAGGGCT...................................................................................................................................................................................................................................................................................2611.001100000
..........................CTCAATGCCAAGGGCTATCCAGG............................................................................................................................................................................................................................................................................2311.001100000
...GCACTACCTACAAAGTGACAGGACTCAAT.............................................................................................................................................................................................................................................................................................2911.001100000
.......................................GCTATCCAGGAGTTAACCTGAAG...............................................................................................................................................................................................................................................................2311.001100000
droGri2
CTGGTACCACCTACAAGGTGACCGGTCTCAATGCCCGTGGCTATCCCGGCGTCAGTCTCAAGATCTAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................GGTGACCGGTCTCAATGCCCGTG......................................................................................................................................................................................................................................................................................2311.00110
...................................CGTGGCTATCCCGGCGTCAGT.....................................................................................................................................................................................................................................................................2111.00101
...............AGGTGACCGGTCTCAATGC...........................................................................................................................................................................................................................................................................................1911.00110
............ACAAGGTGACCGGTCTCAATG............................................................................................................................................................................................................................................................................................2111.00101
..................................CCGTGGCTATCCCGGCGTCAGTC....................................................................................................................................................................................................................................................................2311.00110
..............................ATGCCCGTGGCTATCCCGGCGTCAGTC....................................................................................................................................................................................................................................................................2711.00101
..GGTACCACCTACAAGGTGACCGGTCT.................................................................................................................................................................................................................................................................................................2611.00110
.............................................CCGGCGTCAGTCTCAAGAT.............................................................................................................................................................................................................................................................1911.00101
dp5
CTGGCACCACCTACAAGGTGACCGGCCTCAATGCCAAGGGCCTGCCCGGTGTCCCCCTGAAGATCTAGATTAGATTATGTATA---TATT-ATATATGTATATAGATTGAATTCAATTAAATGTGGTAG-------------------------------ATTTTT---------------------GA-----------------------------------------TAAA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................ATAGATTGAATTCAATTAAATGTGGTA.............................................................................................................................................................................................2721.5030030000000
................................................................CTAGATTAGATTATGTATA---.......................................................................................................................................................................................................................................1921.0020200000000
............................CAATGCCAAGGGCCTGCCCGGT...........................................................................................................................................................................................................................................................................2221.0020200000000
............................................................................................................GAATTCAATTAAATGTGGTAG-------------------------------ATTTTT---------------------..................................................................................................................................2721.0020020000000
..........CTACAAGGTGACCGGCCTCA...............................................................................................................................................................................................................................................................................................2011.0010010000000
................................................................................................................TCAATTAAATGTGGTAG-------------------------------ATTTTT---------------------GA-----------------------------------------TAAA-----------------------------------------------------------------------------------2920.5010010000000
.................................................................................................................CAATTAAATGTGGTAG-------------------------------ATTTT........................................................................................................................................................2120.5010010000000
....................................AGGGCCTGCCCGGTGTCCCCCTGAAGA..............................................................................................................................................................................................................................................................2720.5010100000000
...........................................................................................................TGAATTCAATTAAATGTGGTAG-------------------------------ATTTTT---------------------..................................................................................................................................2820.5010100000000
............................................CCCGGTGTCCCCCTGAAGATCTAGA........................................................................................................................................................................................................................................................2520.5010100000000
........................................................................................................GATTGAATTCAATTAAATGTGGTAG-------------------------------AT...........................................................................................................................................................2720.5010010000000
.................................................................................................................CAATTAAATGTGGTAG-------------------------------ATT..........................................................................................................................................................1920.5010010000000
......................................................................................................................AAATGTGGTAG-------------------------------ATTTTT---------------------GA-----------------------------------------T......................................................................................2020.5010000100000
..................................................GTCCCCCTGAAGATCTAGATTAGATT.................................................................................................................................................................................................................................................2620.5010100000000
...............................TGCCAAGGGCCTGCCCGGTGTCC.......................................................................................................................................................................................................................................................................2320.5010001000000
.................................................................................................................CAATTAAATGTGGTAG-------------------------------ATTTTT---------------------G.................................................................................................................................2320.5010100000000
droPer2
CTGGCACCACCTACAAGGTGACCGGCCTCAATGCCAAGGGCCTGCCCGGTGTCCCCCTGAAGATCTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........ACCTACAAGGTGACCGGCCT.................................................................................................................................................................................................................................................................................................2014.004400000
........ACCTACAAGGTGACCGGC...................................................................................................................................................................................................................................................................................................1811.001100000
..........CTACAAGGTGACCGGCCTCA...............................................................................................................................................................................................................................................................................................2011.001010000
droAna3
CTGGCACCACCTTCAAGGTCACTGGGCTAAACGCCACCGGCTATCCCGGCGTGAACCTCAAGATCTAGGATCTGG-----CTC---TAGG-ATCTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................CTCAAGATCTAGGATCTGG-----CTC---TAGG-..................................................................................................................................................................................................................................2612.002000020
....................................................GAACCTCAAGATCTAGGATCTGG-----CC...........................................................................................................................................................................................................................................2511.001010000
......................................................ACCTCAAGATCTAGGATCTGG-----CT...........................................................................................................................................................................................................................................2311.001100000
................................................GCGTGAACCTCAAGATCTAGG........................................................................................................................................................................................................................................................2111.001100000
................................................GCGTGAACCTCAAGATCTAGGAT......................................................................................................................................................................................................................................................2311.001010000
........................................................................TGG-----CTC---TAGG-ATCTATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1811.001000001
........................................CTATCCCGGCGTGAACCTCAAGATCTAG.........................................................................................................................................................................................................................................................2811.001100000
.......CACCTTCAAGGTCACTGGGCTAAAC.............................................................................................................................................................................................................................................................................................2511.001000001
.......................................................CCTCAAGATCTAGGATCTGG-----CT...........................................................................................................................................................................................................................................2211.001010000
................................................................CTAGGATCTGG-----CTC---TAGG-A.................................................................................................................................................................................................................................1911.001100000
.......CACCTTCAAGGTCACTGGGCT.................................................................................................................................................................................................................................................................................................2111.001000100
...................................................TGAACCTCAAGATCTAGGATC.....................................................................................................................................................................................................................................................2111.001100000
........ACCTTCAAGGTCACTGGGC..................................................................................................................................................................................................................................................................................................1911.001010000
.............................................................GATCTAGGATCTGG-----CTC---TAGG-A.................................................................................................................................................................................................................................2211.001000010
......................................GGCTATCCCGGCGTGAACC....................................................................................................................................................................................................................................................................1911.001010000
.........................................................TCAAGATCTAGGATCTGG-----CTC---TAGG-A.................................................................................................................................................................................................................................2611.001000010
.....................................................AACCTCAAGATCTAGGATCT....................................................................................................................................................................................................................................................2011.001010000
.....................CTGGGCTAAACGCCACCGGCTATCCC..............................................................................................................................................................................................................................................................................2611.001100000
..................................................................AGGATCTGG-----CTC---TAGG-ATCT..............................................................................................................................................................................................................................2011.001100000
..........CTTCAAGGTCACTGGGCTAAACGCCAC........................................................................................................................................................................................................................................................................................2711.001000001
..................................CACCGGCTATCCCGGCGTGAACCTC..................................................................................................................................................................................................................................................................2511.001100000
.................................CCACCGGCTATCCCGGCGTGAACC....................................................................................................................................................................................................................................................................2411.001010000
droBip1
CTGGCACTGTCTTCCAGGTGACGGGACTGAATTCCAAGGGTTTCCCTGGAGTCAGTTTGAAGGTATAGATTCAAAGCTATATACAATGACTTTT--AATAAA---AATAAGATTT---------------------------------------------------TAAATATTATGGTGTTTCATTGTTTATCTCCAATACCTGAATTATTTCTGCGGTA--------AATAGAATAGTATATAGGCTCCATTGATTA-CTGATAACATCCTTATATAGTAAC-------CCTAAATGACTGAATCATGCTTATTTSizeHit CountTotal NormTotal
No Reads
droKik1
CTGGCACCACCTACAAGGTGACCGGCCTGAATGCCACCGGTTACCCCGGCGTCAATCTGAGGGTCTGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTGGCACCACCTACAAGGTGACTGGCCTGAACGCCACTGGACTGCCCGGTGTCAACCTGAAGGTCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTGGCACCACCTACAAGGTGACTGGCCTGAACGCCACCGGATTCCCAGGCGTCAACTTGAAGGTCTAGGAGCTGCAATC-------------TC--TATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CTGGTACCACCTACCAGGTCACTGGTCTGAATGCCAAGGGTTACCCCGGCGTCAACTTGAAGATCTAAGTCAAAGACTA-------------TC--TGTATA---AAAGAGTTTAATTAAATAAGCAAGAGTGTACTTGTAAACTGAAGTGAT-----------------------------------------------ACAAATTTGCATTTTAT----------------A-----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTGGCACCACCTACCAGGTCACCGGTCTCAATGCCAAGGGTTACCCCGGCGTCAGCCTGAAGATCTAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CTGGCACCACCTACAAGGTGACCGGCCTGAATGCCACCGGCTATCCCGGCGTCAACCTGAAGGTCTGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTGGCACCACTTACCAGGTCACTGGTCTCAATGCCAAGGGCTATGCCGGCGTCAATTTGAAGATCTAGATTTTAGAGTA-------------CT--TGTATA---ATAGCAATTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CTGGTACCACCTTCCAGGTCACTGGGCTCAATGCCAAGGGTTACGCCGGCGTTAATTTGAAGATCTAGATTATAGACTA-------------CT--TGTATA---ATAGCATTTAATTAAATAATCAAACATTTACTTGTATACTGAACTAATGCAGTTGGTTTTT---------------------CT----------------------------CTTATTTTTGGCATTTA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................GTTAATTTGAAGATCTAGATT......................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000000000000000000100000000
..................................................GTTAATTTGAAGATCTAGAT.......................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000001300000000000000001000000000000
..............................................................................................................................AAACATTTACTTGTATACTGA..........................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AAACATTTACTTGTATACTGAACT.......................................................................................................................................................................2414.0040000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................TTACTTGTATACTGAACTAAAA...................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GGGCTCAATGCCAAGGGTTACGC...............................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTTAATTTGAAGATCTAGA........................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000
..........................................................................................................................AATCAAACATTTACTTGTATACTGA..........................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CAAACATTTACTTGTATACTGAACT.......................................................................................................................................................................2512.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GGTTACGCCGGCGTTAATTTGAAGATC............................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATTTACTTGTATACTGAACTAAAA...................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCCAAGGGTTACGCCGGC...........................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ACGCCGGCGTTAATTTGAAG...............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................TAGACTA-------------CT--TGTATA---ATAGCATTTAAT........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGGTCACTGGGCTCAATGCC..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TGTATA---ATAGCATTTAATT.......................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................ATTTGAAGATCTAGATTATAGACTA-------------CT--T............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TAATTTGAAGATCTAGAT.......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AACATTTACTTGTATACT............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................GATTATAGACTA-------------CT--TGTATA---ATAGCA..............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GTACCACCTTCCAGGTCA........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTCAATGCCAAGGGTTACGCCGGC...........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGAAGATCTAGATTATAGACTA-------------C................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CCAAGGGTTACGCCGGCGTTA.......................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................TTAAATAATCAAACATTTACTTGTATA..............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CTAATGCAGTTGGTTTTT---------------------C.................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATTTACTTGTATACTGAACTATC....................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTTAATTTGAAGATCTAGATTATAGACT...............................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATTTACTTGTATACTGAACTAAAAA..................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATTTACTTGTATACTGAACT.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTTGAAGATCTAGATTATAGACTA-------------CT--.............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................ATAGACTA-------------CT--TGTATA---ATAGCATTTAATTA......................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ATAGACTA-------------CT--TGTATA---AT..................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ATAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TAATTTGAAGATCTAGATT......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.............................................................GATCTAGATTATAGACTA-------------CT--TGT..........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................GGCGTTAATTTGAAGATCTAGAT.......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................ACTA-------------CT--TGTATA---ATAGCATTT...........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AATTTGAAGATCTAGATTAT....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AAACATTTACTTGTATACTGAAA........................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GGGCTCAATGCCAAGGGTTACGCCGGC...........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACTGGGCTCAATGCCAAGG......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AAACATTTACTTGTATACTGAA.........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GCGTTAATTTGAAGATCTA..........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................GGCTCAATGCCAAGGGTTA..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AAGGGTTACGCCGGCGTTAA......................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AAACATTTACTTGTATACTGAACTA......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGAAGATCTAGATTATAGACTA-------------CT--T............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCCAAGGGTTACGCCGGCGT.........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GGGTTACGCCGGCGTTAATTTGAAG...............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTTAATTTGAAGATCTAGATTAT....................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................ATCAAACATTTACTTGTATACTGA..........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTTAATTTGAAGATCTAGATTA.....................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
CTGGCACCACCTTCCAGGTCACTGGGCTCAATGCCAAGGGTTTCGCCGGCGTTAGTTTGAAGATCTAGTTTGTAGACTA-------------CT--TGTATA---ATAGCATTTAATTAAATAATCAAACGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................TTGAAGATCTAGTTTGTAGACT...............................................................................................................................................................................................................................................22112.0012012000000000000000
..........................................................GAAGATCTAGTTTGTAGACT...............................................................................................................................................................................................................................................20111.0011010100000000000000
..........................................................GAAGATCTAGTTTGTAGACTA-------------CT--T............................................................................................................................................................................................................................24110.001009100000000000000
...................................................................GTTTGTAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2518.00807000000000100000
.........................................................TGAAGATCTAGTTTGTAGACT...............................................................................................................................................................................................................................................2118.00807100000000000000
..................................................GTTAGTTTGAAGATCTAGTTTGTAGAC................................................................................................................................................................................................................................................2717.00707000000000000000
...................................................................GTTTGTAGACTA-------------CT--TGTATA---AT..................................................................................................................................................................................................................2216.00603200000000100000
..................................................GTTAGTTTGAAGATCTAGTTTGTAGA.................................................................................................................................................................................................................................................2616.00606000000000000000
.......................................................................GTAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2115.00505000000000000000
........................................................TTGAAGATCTAGTTTGTAGACTA-------------CT--T............................................................................................................................................................................................................................2614.00404000000000000000
.....................................................................TTGTAGACTA-------------CT--TGTATA---ATA.................................................................................................................................................................................................................2114.00404000000000000000
........................................................TTGAAGATCTAGTTTGTAGAC................................................................................................................................................................................................................................................2114.00404000000000000000
..........................................................GAAGATCTAGTTTGTAGAC................................................................................................................................................................................................................................................1914.00404000000000000000
..........................................................GAAGATCTAGTTTGTAGACC...............................................................................................................................................................................................................................................2013.00303000000000000000
......................................................GTTTGAAGATCTAGTTTGTAGACTA-------------CT--.............................................................................................................................................................................................................................2713.00303000000000000000
.....................................................................TTGTAGACTA-------------CT--TGTATA---ATAGCATT............................................................................................................................................................................................................2613.00303000000000000000
......................................................GTTTGAAGATCTAGTTTGTAGACTA-------------CT--T............................................................................................................................................................................................................................2813.00303000000000000000
..................................CAAGGGTTTCGCCGGCGTTAGT.....................................................................................................................................................................................................................................................................2213.00302000000000100000
..........................................................GAAGATCTAGTTTGTAGA.................................................................................................................................................................................................................................................1813.00303000000000000000
.......................................GTTTCGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................2313.00303000000000000000
.......................................................TTTGAAGATCTAGTTTGTAGACTA-------------CT--T............................................................................................................................................................................................................................2713.00302010000000000000
.........................................................TGAAGATCTAGTTTGTAGACTA-------------CT--.............................................................................................................................................................................................................................2413.00302010000000000000
................GGTCACTGGGCTCAATGCCAAGGGT....................................................................................................................................................................................................................................................................................2512.00200020000000000000
..................................................................AGTTTGTAGACTA-------------CT--TGT..........................................................................................................................................................................................................................1812.00202000000000000000
.........................................................TGAAGATCTAGTTTGTAGAC................................................................................................................................................................................................................................................2012.00202000000000000000
..................................................................AGTTTGTAGACTA-------------CT--TGTATA---ATAG................................................................................................................................................................................................................2512.00202000000000000000
......................................................................TGTAGACTA-------------CT--TGTATA---AT..................................................................................................................................................................................................................1912.00202000000000000000
......................................................GTTTGAAGATCTAGTTTGTAGACT...............................................................................................................................................................................................................................................2412.00202000000000000000
..............................................................ATCTAGTTTGTAGACTA-------------CT--T............................................................................................................................................................................................................................2012.00202000000000000000
........................................................TTGAAGATCTAGTTTGTAGA.................................................................................................................................................................................................................................................2012.00202000000000000000
..................................................GTTAGTTTGAAGATCTAGTTTGTAGACT...............................................................................................................................................................................................................................................2812.00202000000000000000
...................................................................GTTTGTAGACTA-------------CT--TGTATA---ATAG................................................................................................................................................................................................................2412.00202000000000000000
.......................................................................GTAGACTA-------------CT--TGTATA---ATA.................................................................................................................................................................................................................1912.00202000000000000000
.......................................................TTTGAAGATCTAGTTTGTAGAC................................................................................................................................................................................................................................................2212.00200200000000000000
........................................................TTGAAGATCTAGTTTGTAGACTA-------------CT--.............................................................................................................................................................................................................................2512.00202000000000000000
....CACCACCTTCCAGGTCACTGGGCTCAAT.............................................................................................................................................................................................................................................................................................2812.00202000000000000000
...............................................GGCGTTAGTTTGAAGATC............................................................................................................................................................................................................................................................1812.00202000000000000000
................................GCCAAGGGTTTCGCCGGCGTTAGT.....................................................................................................................................................................................................................................................................2411.00100010000000000000
..................................................GTTAGTTTGAAGATCTAGTTTGTAGG.................................................................................................................................................................................................................................................2611.00101000000000000000
....CACCACCTTCCAGGTCACTG.....................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.........................................TTCGCCGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2511.00101000000000000000
........................................TTTCGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................2211.00110000000000000000
.....................................................................TTGTAGACTA-------------CT--TGTATA---....................................................................................................................................................................................................................1811.00101000000000000000
..GGCACCACCTTCCAGGTCACTGGGC..................................................................................................................................................................................................................................................................................................2511.00101000000000000000
......................................GGTTTCGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................2411.00101000000000000000
..............................................................ATCTAGTTTGTAGACTA-------------CT--.............................................................................................................................................................................................................................1911.00101000000000000000
..................................................................AGTTTGTAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2611.00101000000000000000
..........................................................GAAGATCTAGTTTGTAGACTA-------------CT--TGT..........................................................................................................................................................................................................................2611.00101000000000000000
..................................................................AGTTTGTAGACTA-------------CT--TGTATA---....................................................................................................................................................................................................................2111.00101000000000000000
..................................................GTTAGTTTGAAGATCTAGTTTG.....................................................................................................................................................................................................................................................2211.00101000000000000000
.................................CCAAGGGTTTCGCCGGCGTT........................................................................................................................................................................................................................................................................2011.00101000000000000000
...............................................GGCGTTAGTTTGAAGATCTAGTTTGTAGA.................................................................................................................................................................................................................................................2911.00100010000000000000
.............................................................GATCTAGTTTGTAGACTA-------------CT--.............................................................................................................................................................................................................................2011.00101000000000000000
.....................................................................TTGTAGACTA-------------CT--TGTATA---ATAG................................................................................................................................................................................................................2211.00101000000000000000
...GCACCACCTTCCAGGTCACTGGGCTCAAT.............................................................................................................................................................................................................................................................................................2911.00100010000000000000
.......................................GTTTCGCCGGCGTTAGTT....................................................................................................................................................................................................................................................................1811.00100010000000000000
.......................................GTTTCGCCGGCGTTAGTTTGG.................................................................................................................................................................................................................................................................2111.00101000000000000000
..........................................TCGCCGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2411.00101000000000000000
.......................................GTTTCGCCGGCGTTAGTTTG..................................................................................................................................................................................................................................................................2011.00101000000000000000
...........................................CGCCGGCGTTAGTTTGAAGATC............................................................................................................................................................................................................................................................2211.00100100000000000000
...................................................................GTTTGTAGACTA-------------CT--TGTATA---ATAGCATT............................................................................................................................................................................................................2811.00101000000000000000
........ACCTTCCAGGTCACTGGGC..................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.......................................................TTTGAAGATCTAGTTTGTAGACTA-------------CG--.............................................................................................................................................................................................................................2611.00101000000000000000
..................................CAAGGGTTTCGCCGGCGTTAGTTTGA.................................................................................................................................................................................................................................................................2611.00101000000000000000
..........................................................GAAGATCTAGTTTGTAGACTA-------------CC--.............................................................................................................................................................................................................................2311.00101000000000000000
.......................................................................GTAGACTA-------------CT--TGTATA---ATAGCATTT...........................................................................................................................................................................................................2511.00101000000000000000
.........................................................TGAAGATCTAGTTTGTAG..................................................................................................................................................................................................................................................1811.00101000000000000000
..................................................................AGTTTGTAGACTA-------------CT--TGTATA---AT..................................................................................................................................................................................................................2311.00101000000000000000
.......................................................................GTAGACTA-------------CT--TGTATA---ATAG................................................................................................................................................................................................................2011.00101000000000000000
...........................................CGCCGGCGTTAGTTTGAAGATCTA..........................................................................................................................................................................................................................................................2411.00101000000000000000
.......................GGGCTCAATGCCAAGGGTTTCGCCG.............................................................................................................................................................................................................................................................................2511.00100010000000000000
..........................................TCGCCGGCGTTAGTTTGAAGAT.............................................................................................................................................................................................................................................................2211.00100010000000000000
....................................AGGGTTTCGCCGGCGTTAGTTTGA.................................................................................................................................................................................................................................................................2411.00101000000000000000
....CACCACCTTCCAGGTCACTGGGC..................................................................................................................................................................................................................................................................................................2311.00101000000000000000
......CCACCTTCCAGGTCACTG.....................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.....................................................................TTGTAGACTA-------------CT--TGTATA---ATAGCA..............................................................................................................................................................................................................2411.00101000000000000000
..............................................................................................................ATTTAATTAAATAATCAAACGTT........................................................................................................................................................................................2311.00100010000000000000
..................................................................................................................AATTAAATAATCAAACGT.........................................................................................................................................................................................1811.00100010000000000000
..................................................................AGTTTGTAGACTA-------------CT--TGTATA---ATAGCAT.............................................................................................................................................................................................................2811.00100010000000000000
......................................................................TGTAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2211.00100010000000000000
........ACCTTCCAGGTCACTGGGCT.................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.................................CCAAGGGTTTCGCCGGCGTTAGT.....................................................................................................................................................................................................................................................................2311.00101000000000000000
...........................TCAATGCCAAGGGTTTCGCCGGCGT.........................................................................................................................................................................................................................................................................2511.00101000000000000000
....................................................................TTTGTAGACTA-------------CT--TGTATA---ATA.................................................................................................................................................................................................................2211.00101000000000000000
...........................................CGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................1811.00100010000000000000
...................................................................GTTTGTAGACTA-------------CT--TGTATA---ATA.................................................................................................................................................................................................................2311.00101000000000000000
............TCCAGGTCACTGGGCTCAATGCC..........................................................................................................................................................................................................................................................................................2311.00101000000000000000
...........................................CGCCGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2311.00100010000000000000
..................................CAAGGGTTTCGCCGGCGTTAGTT....................................................................................................................................................................................................................................................................2311.00101000000000000000
.......................................................TTTGAAGATCTAGTTTGTAGACT...............................................................................................................................................................................................................................................2311.00101000000000000000
......................................................GTTTGAAGATCTAGTTTGTAGA.................................................................................................................................................................................................................................................2211.00100010000000000000
......................................................GTTTGAAGATCTAGTTTGTAGAC................................................................................................................................................................................................................................................2311.00101000000000000000
................................................................CTAGTTTGTAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2811.00100010000000000000
.......................GGGCTCAATGCCAAGGGTTTCGCCGGCGT.........................................................................................................................................................................................................................................................................2911.00101000000000000000
.....................................................................TTGTAGACTA-------------CT--TGTATA---ATAGCAT.............................................................................................................................................................................................................2511.00101000000000000000
................................................................................................................TTAATTAAATAATCAAACGT.........................................................................................................................................................................................2011.00100010000000000000
.........................................................TGAAGATCTAGTTTGTAGACTA-------------CT--T............................................................................................................................................................................................................................2511.00101000000000000000
..........................................................GAAGATCTAGTTTGTAGACTA-------------CT--.............................................................................................................................................................................................................................2311.00101000000000000000
.......................................................................GTAGACTA-------------CT--TGTATA---AT..................................................................................................................................................................................................................1811.00101000000000000000
.....................................................AGTTTGAAGATCTAGTTTGTAGACTA-------------CT--.............................................................................................................................................................................................................................2811.00101000000000000000
..................................................................AGTTTGTAGACTA-------------CT--TGTATA---ATA.................................................................................................................................................................................................................2411.00101000000000000000
..............................ATGCCAAGGGTTTCGCCGGC...........................................................................................................................................................................................................................................................................2011.00101000000000000000
........................................................TTGAAGATCTAGTTTGTAG..................................................................................................................................................................................................................................................1911.00101000000000000000
......................................................................TGTAGACTA-------------CT--TGTATA---ATA.................................................................................................................................................................................................................2011.00101000000000000000
...................CACTGGGCTCAATGCCAA........................................................................................................................................................................................................................................................................................1811.00101000000000000000
.......................................GTTTCGCCGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2711.00101000000000000000
................................................................CTAGTTTGTAGACTA-------------CT--T............................................................................................................................................................................................................................1811.00100100000000000000
......................................................................TGTAGACTA-------------CT--TGTATA---ATAGCATT............................................................................................................................................................................................................2511.00101000000000000000
................................................................CTAGTTTGTAGACTA-------------CT--TGTATA---ATAG................................................................................................................................................................................................................2711.00101000000000000000
....................................................................TTTGTAGACTA-------------CT--TGTAC........................................................................................................................................................................................................................1820.50101000000000000000
droSec2
CTGGCACCACCTTCCAGGTCACTGGGCTCAATGCCAACGGTTTCGCCGGCGTTAGTTTGAAGATCTAGATTGTAGACTA-------------CT--TGTATA---ATAGCATTTAATTAAATAATCAAACGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................GGTCACTGGGCTCAATGCCAACGGTTT..................................................................................................................................................................................................................................................................................2718.0088000
...........................................CGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................1917.0073400
..............................................................ATCTAGATTGTAGACTA-------------CT--TGT..........................................................................................................................................................................................................................2215.0050410
......................................GGTTTCGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................2414.0040400
.............................................................GATCTAGATTGTAGACTA-------------CT--TGT..........................................................................................................................................................................................................................2314.0042200
...........................................CGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................1813.0031020
.....ACCACCTTCCAGGTCACTGGGCTC................................................................................................................................................................................................................................................................................................2413.0031200
..................................................GTTAGTTTGAAGATCTAGATTGTAGACT...............................................................................................................................................................................................................................................2813.0030300
...........................................CGCCGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2313.0031110
.........................................TTCGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................2113.0030210
..............................ATGCCAACGGTTTCGCCGGC...........................................................................................................................................................................................................................................................................2013.0032100
...........................................CGCCGGCGTTAGTTTGAAGA..............................................................................................................................................................................................................................................................2012.0020200
...........................................CGCCGGCGTTAGTTTGAAGATCTA..........................................................................................................................................................................................................................................................2412.0020200
.........................................TTCGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................2012.0020200
...........................................CGCCGGCGTTAGTTTGAAGAT.............................................................................................................................................................................................................................................................2112.0020200
...................................AACGGTTTCGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................2712.0020200
.........................................................TGAAGATCTAGATTGTAGACTA-------------CT--T............................................................................................................................................................................................................................2512.0020200
...........................................CGCCGGCGTTAGTTTGAAGATCTAGA........................................................................................................................................................................................................................................................2612.0020200
......................................................GTTTGAAGATCTAGATTGTAGACTA-------------CT--T............................................................................................................................................................................................................................2812.0020200
.......................................GTTTCGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................2212.0020110
..................................................GTTAGTTTGAAGATCTAGATTGTAGAC................................................................................................................................................................................................................................................2712.0020200
................GGTCACTGGGCTCAATGCCAACGG.....................................................................................................................................................................................................................................................................................2412.0022000
......................................................GTTTGAAGATCTAGATTGTA...................................................................................................................................................................................................................................................2012.0021100
........................................................TTGAAGATCTAGATTGTAGA.................................................................................................................................................................................................................................................2012.0021100
................GGTCACTGGGCTCAATGCCAAC.......................................................................................................................................................................................................................................................................................2212.0022000
...................CACTGGGCTCAATGCCAACGGT....................................................................................................................................................................................................................................................................................2212.0020200
.................................CCAACGGTTTCGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................2812.0021100
.............................AATGCCAACGGTTTCGCCGGCGT.........................................................................................................................................................................................................................................................................2311.0011000
.......................................................TTTGAAGATCTAGATTGTAGACTA-------------CT--T............................................................................................................................................................................................................................2711.0010100
..............................................................ATCTAGATTGTAGACTA-------------CT--TGTATA---....................................................................................................................................................................................................................2511.0011000
..............................................................ATCTAGATTGTAGACTA-------------CT--TG...........................................................................................................................................................................................................................2111.0011000
..................................................GTTAGTTTGAAGATCTAGATTGT....................................................................................................................................................................................................................................................2311.0011000
...................CACTGGGCTCAATGCCAACG......................................................................................................................................................................................................................................................................................2011.0011000
...............................TGCCAACGGTTTCGCCGGC...........................................................................................................................................................................................................................................................................1911.0011000
............................................GCCGGCGTTAGTTTGAAGA..............................................................................................................................................................................................................................................................1911.0010100
.........................................TTCGCCGGCGTTAGTTTGAAGAT.............................................................................................................................................................................................................................................................2311.0010100
.........CCTTCCAGGTCACTGGGCTC................................................................................................................................................................................................................................................................................................2011.0011000
......................................................GTTTGAAGATCTAGATTGT....................................................................................................................................................................................................................................................1911.0011000
.................................................CGTTAGTTTGAAGATCTAGA........................................................................................................................................................................................................................................................2011.0010100
................................................................CTAGATTGTAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2811.0010010
..................................................GTTAGTTTGAAGATCTAGATTGTAGA.................................................................................................................................................................................................................................................2611.0010010
............TCCAGGTCACTGGGCTCAATGCCAACGGT....................................................................................................................................................................................................................................................................................2911.0010010
.......................................GTTTCGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................2311.0010100
................................................................CTAGATTGTAGACTA-------------CT--TGT..........................................................................................................................................................................................................................2011.0011000
.......................................GTTTCGCCGGCGTTAGTTTGA.................................................................................................................................................................................................................................................................2111.0010010
.............................................................GATCTAGATTGTAGACTA-------------CT--TGTAT........................................................................................................................................................................................................................2511.0011000
.........................................TTCGCCGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2511.0011000
.............................................CCGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2111.0010100
.................GTCACTGGGCTCAATGCC..........................................................................................................................................................................................................................................................................................1811.0011000
..........................................TCGCCGGCGTTAGTTTGAAGATC............................................................................................................................................................................................................................................................2311.0010100
...........................................CGCCGGCGTTAGTTTGAAGATC............................................................................................................................................................................................................................................................2211.0010010
.........................................TTCGCCGGCGTTAGTTTGAAGATCTA..........................................................................................................................................................................................................................................................2611.0010010
...................................AACGGTTTCGCCGGCGTTAGTTTGAAGA..............................................................................................................................................................................................................................................................2811.0010100
........................................................TTGAAGATCTAGATTGTA...................................................................................................................................................................................................................................................1811.0010001
........................GGCTCAATGCCAACGGTTT..................................................................................................................................................................................................................................................................................1911.0011000
.......................................................................GTAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2111.0011000
..................................................................AGATTGTAGACTA-------------CT--TGTAT........................................................................................................................................................................................................................2011.0011000
................................................................CTAGATTGTAGACTA-------------CT--TGTATA---AT..................................................................................................................................................................................................................2511.0010010
..............................ATGCCAACGGTTTCGCCGGCGT.........................................................................................................................................................................................................................................................................2211.0011000
..........................................TCGCCGGCGTTAGTTTGAAG...............................................................................................................................................................................................................................................................2011.0010100
..................................................GTTAGTTTGAAGATCTAGATTG.....................................................................................................................................................................................................................................................2211.0010100
.............................AATGCCAACGGTTTCGCC..............................................................................................................................................................................................................................................................................1811.0010010
................GGTCACTGGGCTCAATGCCAACGGT....................................................................................................................................................................................................................................................................................2511.0011000
..............................................CGGCGTTAGTTTGAAGATCTAGA........................................................................................................................................................................................................................................................2311.0010100
.............................AATGCCAACGGTTTCGCCGGC...........................................................................................................................................................................................................................................................................2111.0010010
......................................GGTTTCGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................2311.0010100
.............................................................GATCTAGATTGTAGACTA-------------CT--TGTC.........................................................................................................................................................................................................................2411.0011000
.................GTCACTGGGCTCAATGCCAACGGTTT..................................................................................................................................................................................................................................................................................2611.0011000
..............................................CGGCGTTAGTTTGAAGAT.............................................................................................................................................................................................................................................................1811.0011000
................GGTCACTGGGCTCAATGCCAACGGTT...................................................................................................................................................................................................................................................................................2611.0011000
........................GGCTCAATGCCAACGGTTTCGCCGGC...........................................................................................................................................................................................................................................................................2611.0011000
...GCACCACCTTCCAGGTCACTGGGCTCA...............................................................................................................................................................................................................................................................................................2711.0010100
..........................................TCGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................1911.0010100
................GGTCACTGGGCTCAATGCCAACGGC....................................................................................................................................................................................................................................................................................2511.0011000
............................................GCCGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2211.0011000
..................................................GTTAGTTTGAAGATCTAGATTGTA...................................................................................................................................................................................................................................................2411.0010100
......................................................GTTTGAAGATCTAGATTGTAG..................................................................................................................................................................................................................................................2111.0010100
..................................................................AGATTGTAGACTA-------------CT--TGTATA---....................................................................................................................................................................................................................2111.0011000
........................................................TTGAAGATCTAGATTGTAGACTA-------------CT--TGT..........................................................................................................................................................................................................................2811.0010100
....................................................................ATTGTAGACTA-------------CT--TGTATA---ATA.................................................................................................................................................................................................................2211.0010100
...................CACTGGGCTCAATGCCAACGG.....................................................................................................................................................................................................................................................................................2111.0011000
..........................................TCGCCGGCGTTAGTTTGAAGAT.............................................................................................................................................................................................................................................................2211.0010100
................................................................CTAGATTGTAGACTA-------------CT--TGTAT........................................................................................................................................................................................................................2211.0010010
.........................................................TGAAGATCTAGATTGTAGACT...............................................................................................................................................................................................................................................2111.0010100
..............................................................ATCTAGATTGTAGACTA-------------CT--TGTAT........................................................................................................................................................................................................................2411.0010100
..................................................GTTAGTTTGAAGATCTAGATT......................................................................................................................................................................................................................................................2111.0010100
......................................GGTTTCGCCGGCGTTAGT.....................................................................................................................................................................................................................................................................1811.0010001
.............................................................GATCTAGATTGTAGACTA-------------CT--.............................................................................................................................................................................................................................2011.0011000
.......................................GTTTCGCCGGCGTTAGTTTGAAGATCTA..........................................................................................................................................................................................................................................................2811.0010100
............................CAATGCCAACGGTTTCGCCGGCGT.........................................................................................................................................................................................................................................................................2411.0011000
...............................................GGCGTTAGTTTGAAGATCTAG.........................................................................................................................................................................................................................................................2111.0010100
............................CAATGCCAACGGTTTCGCCG.............................................................................................................................................................................................................................................................................2011.0010100
........................................TTTCGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................2111.0010100
.....................................CGGTTTCGCCGGCGTTAGTTT...................................................................................................................................................................................................................................................................2111.0011000
....................ACTGGGCTCAATGCCAACGGTTTCGCC..............................................................................................................................................................................................................................................................................2711.0010010
.......................................................TTTGAAGATCTAGATTGTA...................................................................................................................................................................................................................................................1911.0010010
......................................................................TGTAGACTA-------------CT--TGTATA---ATAGC...............................................................................................................................................................................................................2211.0011000
....CACCACCTTCCAGGTCACTGGGCTC................................................................................................................................................................................................................................................................................................2511.0010100
.....ACCACCTTCCAGGTCACTGGGCTCA...............................................................................................................................................................................................................................................................................................2511.0011000
......................................GGTTTCGCCGGCGTTAGTTTGAAGAT.............................................................................................................................................................................................................................................................2611.0010100
.........................................TTCGCCGGCGTTAGTTTGAAGATCTAG.........................................................................................................................................................................................................................................................2711.0010100
..............................................CGGCGTTAGTTTGAAGATCT...........................................................................................................................................................................................................................................................2011.0011000
.........................................................TGAAGATCTAGATTGTAGACG...............................................................................................................................................................................................................................................2111.0011000
..............CAGGTCACTGGGCTCAATGCCAACGGT....................................................................................................................................................................................................................................................................................2711.0011000
..................................................................AGATTGTAGACTA-------------CT--TGTATA---A...................................................................................................................................................................................................................2211.0011000
..........................CTCAATGCCAACGGTTTCGCC..............................................................................................................................................................................................................................................................................2111.0010010
........................................................TTGAAGATCTAGATTGTAGACTA-------------C................................................................................................................................................................................................................................2411.0011000
...................................AACGGTTTCGCCGGCGTTAGTTTGAA................................................................................................................................................................................................................................................................2611.0010010
droYak3
CTGGCACCACCTACAAGGTGACCGGACTGAATGCCACTGGCTATCCCGGCGTCAACCTGAAGGTCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................TGACCGGACTGAATGCCACTGGC....................................................................................................................................................................................................................................................................................2312.00220000000000
..........................................ATCCCGGCGTCAACCTGAAGGTCT...........................................................................................................................................................................................................................................................2411.00110000000000
.............................................CCGGCGTCAACCTGAAGGTCT...........................................................................................................................................................................................................................................................2111.00100000010000
........ACCTACAAGGTGACCGGACTGAATG............................................................................................................................................................................................................................................................................................2511.00100000010000
..................TGACCGGACTGAATGCCAC........................................................................................................................................................................................................................................................................................1911.00110000000000
.........................................TATCCCGGCGTCAACCTGAAGGTCT...........................................................................................................................................................................................................................................................2511.00110000000000
.........................ACTGAATGCCACTGGCTATCCCGGC...........................................................................................................................................................................................................................................................................2511.00110000000000
...............AGGTGACCGGACTGAATGCC..........................................................................................................................................................................................................................................................................................2011.00110000000000
..........CTACAAGGTGACCGGACTGAATGCCACT.......................................................................................................................................................................................................................................................................................2811.00100000010000
...............AGGTGACCGGACTGAATGCCACT.......................................................................................................................................................................................................................................................................................2311.00100000010000
............ACAAGGTGACCGGACTGAATGCC..........................................................................................................................................................................................................................................................................................2311.00110000000000
...........TACAAGGTGACCGGACTGAATGC...........................................................................................................................................................................................................................................................................................2311.00100000010000
..............................................CGGCGTCAACCTGAAGGTC............................................................................................................................................................................................................................................................1911.00101000000000
.................GTGACCGGACTGAATGCCACTGGCTATC................................................................................................................................................................................................................................................................................2811.00110000000000
.......CACCTACAAGGTGACCGGACTGAATGCC..........................................................................................................................................................................................................................................................................................2811.00100100000000
................GGTGACCGGACTGAATGCCACTGGC....................................................................................................................................................................................................................................................................................2511.00100000010000
.............CAAGGTGACCGGACTGAATGC...........................................................................................................................................................................................................................................................................................2111.00100000010000
...................GACCGGACTGAATGCCACTGGC....................................................................................................................................................................................................................................................................................2211.00110000000000
.........................................TATCCCGGCGTCAACCTGAA................................................................................................................................................................................................................................................................2011.00100000010000
.......CACCTACAAGGTGACCGGACTGAATG............................................................................................................................................................................................................................................................................................2611.00100000010000
................GGTGACCGGACTGAATGCCACTG......................................................................................................................................................................................................................................................................................2311.00101000000000
................GGTGACCGGACTGAATGCCA.........................................................................................................................................................................................................................................................................................2011.00100000010000
..........................CTGAATGCCACTGGCTATCCC..............................................................................................................................................................................................................................................................................2111.00101000000000
...................GACCGGACTGAATGCCACTGGCT...................................................................................................................................................................................................................................................................................2311.00100100000000
droEre2
CTGGCACCACCTACAAGGTGACCGGCCTGAATGCCACTGGCTATCCCGGCGTCAACCTGAAGGTCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................ATGCCACTGGCTATCCCGGC...........................................................................................................................................................................................................................................................................2012.0020200000
..........................................ATCCCGGCGTCAACCTGAAGGT.............................................................................................................................................................................................................................................................2212.0020101000
.........CCTACAAGGTGACCGGCCTGAATGCC..........................................................................................................................................................................................................................................................................................2611.0010001000
...............AGGTGACCGGCCTGAATGCCACTG......................................................................................................................................................................................................................................................................................2411.0011000000
................GGTGACCGGCCTGAATGCCACT.......................................................................................................................................................................................................................................................................................2211.0011000000
........ACCTACAAGGTGACCGGCCTGAATGC...........................................................................................................................................................................................................................................................................................2611.0010100000
......................CGGCCTGAATGCCACTGGCTATCCC..............................................................................................................................................................................................................................................................................2511.0011000000
..........................................ATCCCGGCGTCAACCTGAAG...............................................................................................................................................................................................................................................................2011.0010001000
..........................................ATCCCGGCGTCAACCTGAAGGTCT...........................................................................................................................................................................................................................................................2411.0010001000
..................................CACTGGCTATCCCGGCGTCAACC....................................................................................................................................................................................................................................................................2311.0010000100
..........CTACAAGGTGACCGGCCT.................................................................................................................................................................................................................................................................................................1811.0010001000
........................................CTATCCCGGCGTCAACCTGAAG...............................................................................................................................................................................................................................................................2211.0010100000
.........................CCTGAATGCCACTGGCTATCCCGGC...........................................................................................................................................................................................................................................................................2511.0010100000
...............AGGTGACCGGCCTGAATGCC..........................................................................................................................................................................................................................................................................................2011.0010000010
...............AGGTGACCGGCCTGAATGCCACT.......................................................................................................................................................................................................................................................................................2311.0011000000
.......CACCTACAAGGTGACCGGCCTGAATGCC..........................................................................................................................................................................................................................................................................................2811.0010001000
.................GTGACCGGCCTGAATGCCACTG......................................................................................................................................................................................................................................................................................2211.0011000000

Generated: 05/18/2015 at 04:31 AM