dwi_2433

intron [Dwil\GK11484-in]; exon [dwil_GLEANR_11690:7]; CDS [Dwil\GK11484-cds]; intron [Dwil\GK11484-in]

-------------------###############################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AATAATTTTATTGTTTCAGCGTAAATCTGTTTCAAATCAACATTGGAATCGTCCTATTATGCTCATGGTTCATAAACAAGATGTTGGCCTAATTTCATTGAGTAAAGTGCTGGAATACTTGGACAGACGTATTTAAATTATTTTCGGATTTCGAGATATATTAAGTATTGAATAAATTTTGAAGTTTCAATTGTTGGTTTTTATCTATTTGGAACTGCTAATTTATCGGTTGCTTACTGCTGCTGATTGCT ************************************************((((.....(((((((((........(((....)))........))).))))))(((((......)))))))))..........((((((..((.((((((((((((.((((........)))).)))))))))))).))....)))))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V117 male body	M045 female body	V118 embryo
.......................................................................ATAAACAAGATGTTGGCCT.................................................................................................................................................................	19	0	2	0.50	1	1	0	0
...........................................................................ACAAGATGTTAGCGTAATT.............................................................................................................................................................	19	2	6	0.17	1	0	0	1
..............................................................................................................................................................................................................ATTTGCAACGGCCAATTTATC........................	21	3	7	0.14	1	0	1	0
..................................AATCAACATTGGAACAGTGCT....................................................................................................................................................................................................	21	3	9	0.11	1	0	1	0

TTATTAAAATAACAAAGTCGCATTTAGACAAAGTTTAGTTGTAACCTTAGCAGGATAATACGAGTACCAAGTATTTGTTCTACAACCGGATTAAAGTAACTCATTTCACGACCTTATGAACCTGTCTGCATAAATTTAATAAAAGCCTAAAGCTCTATATAATTCATAACTTATTTAAAACTTCAAAGTTAACAACCAAAAATAGATAAACCTTGACGATTAAATAGCCAACGAATGACGACGACTAACGA ************************************************((((.....(((((((((........(((....)))........))).))))))(((((......)))))))))..........((((((..((.((((((((((((.((((........)))).)))))))))))).))....)))))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M045 female body	V119 head	M020 head
...........................................................................................................................................................................TATGTAAAGCTTCAAATTTAAC..........................................................	22	3	10	0.30	3	3	0	0
...........................................................................................................................................................................TATGTAAAACTTCAAATTTA............................................................	20	2	20	0.15	3	3	0	0
...........................................................................................................................................................................TATGTAAAGCTTCAAAGTT.............................................................	19	2	20	0.15	3	3	0	0
...........................................................................................................................................................................TATGTAAAACTTCAAATTTAGCA.........................................................	23	3	9	0.11	1	1	0	0
...........................................................................................................................................................................TATGTAAAACTTCAAATTTGACA.........................................................	23	3	11	0.09	1	0	1	0
...........................................................................................................................................................................TATTTAAAACTTCAAATTT.............................................................	19	1	13	0.08	1	1	0	0
...........................CCAAAGTTTAGCTGTAAC..............................................................................................................................................................................................................	18	2	20	0.05	1	0	0	1

Species	Coordinate	ID	Alignment
droWil2	scf2_1100000004902:1179854-1180104 -	dwi_2433	AATAATTTTA--TTGTTTCAGCGTAAATCTGTTTCAAATCAACATTGGAATCGTCCTATTATGCTCATGGTTCATAAACAAGATGTTGGCCTAATTTCATTGAGTAAAGTGCTGGAATACTTGGACAGACGTATTTAAATTATTTTC-----------------------------------------GGATTTCGAGATATATTAAGTATTGAATAAATTTTGA---------------AGTTTCAATTGTTGGTTT-------TTATCTATTTGGAACTGCTAAT------------------TTATCGGTTGCTTACTGCTGCTGATTGCT
droVir3	scaffold_12967:333263-333394 -		AGAGTGCTAA---------------------------------------------------------------------------------------------------------AAAATTTGTATAAACAAATATGACTTTTAATTCAATATTTAGTTAGATATTTTATTAATTGAATTTAGATATTGCACCTCGCG----------------GTGATCTCTAA-----------------------CTGCCGATTT-------CGCATCGGT------------------------------AGCTTA---------------------TTT
droMoj3	scaffold_6540:24182111-24182189 -		TTATTTTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATTATCATATTATTTATTAAATAAGAATTAG---------------ATTTTGATTAAATAATTT-------TTGTATATTTTT--------------------------------A---------------------ATT
droGri2	scaffold_15126:134607-134645 -		ATAAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATTGAACCAATGTCAA---------------TAAGTA-------------------------------------------------------------AAG---------------------TAC
dp5	Unknown_group_59:5577-5662 -		GGCATATTTC---------------------GA--------------------------------------------------------------------------------------------TAAT-----CAAAATTATTTTC-----------------------------------------ACACCTCAGGAAAACTTAAAAATAAAATACGTCCAAC---------------ATTTTCAATATT-----------------------------------------------------TGGTG---------------------TTT
droPer2	scaffold_62:181844-181904 +		TAAACCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTAATGAAACCGGA---------------AGTTTCAATTGATAATTT-------TGAAAAATATGAAG----------------------------------------------------CTG
droAna3	scaffold_13047:1617017-1617110 +		ATAAAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAACATACTTTGA---------------GGCTTTTGTTTTTAGTTT-------TTTTGGTTGTGGAACTGACTAAATG------------------ACTTATTTTGAGTGCTTCTGAGTTTT
droBip1	scf7180000396572:2059014-2059087 +		ATTTGATTTT----------------------------------------------------------------------------------------------------------------------------------T--ATTC-----------------------------------------GGATGCCAGGACT-------TATTAAGTAATTATCAG---------------TTTACAATTTATTATTTG-------T--------------------------------------TGCTTT-------------T-------TGT
droKik1	scf7180000302696:1844937-1845023 +		GGATTAACGAAT----------------TTTAA----------------------------------------------------------------------------------------------------------TTGTT--T-----------------------------------------AAATTTTAG--------AAATTTTAAATAT-------------------------TTCTACTGT--GTTT-------TTATCTAC-TGAAAATACTATC------------------TTCTC---------------------TCT
droFic1	scf7180000454066:738378-738423 -		TTTTAATTCT-------------------------------------------------------------------------------------------------------------------------------------TTTT-----------------------------------------ATGTTTTACTATTTATCAAGTATTGGATAA------------------------------------------------------------------------------------------------------------------AT
droEle1	scf7180000491238:1254474-1254559 -		TTTAATTTTT-------------------------------------------------------------------------------------------------------------------------------------TTTA-----------------------------------------GTTCTTCGAGATATATTAATGGTTAAATATTTCAAAATTACGG---------TT----------TAAATT-------TTATCAAAATCGGAC---------------------------GAC---------------------TAA
droRho1	scf7180000771410:4828-4940 -		TAAATAAAG-------------------TTGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATAAGCATGGG---------------AATTTCAATAATAATTCG-------GGATATATTTAGAATTTAATTAATTTTTTACTTCAATTTTTCTTA---TTTTTCTCATTCAAAAATGCT
droBia1	scf7180000302422:4712697-4712796 -		TTAAATTTAG------------------TTCTT---------------------------------------------------------------------------------CAATATTTCTACTCAAATATTTATATTATTTCC-----------------------------------------GGAGTTCCA----------------AATAAAATTTCA------GAAGAAGTAGGTTCCAATTATATGCTT---------------------------------------------------T---------------------TAT
droTak1	scf7180000415779:720507-720583 +		TTTAAACTAA-------------------------------------------------------------------------------------------------------------------------------------TTTT-----------------------------------------TAACTTTGACAGAAAATAATTATAAAATAAATTTAAA---------------ATTGGCAATGAATAATCG-------TCACT-------------------------------------------------------------TAT
droEug1	scf7180000408940:9325-9401 +		ATTTCATAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCATTTATTGTTTAAAT----------------------TTTGAATTAATAACTCTTTTTTATCATCTGTTTGTGAA------------------------TTTGTT---------------------GGT
dm3	chr2L:21393339-21393401 -		TATGTTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAATAAAA---------------AGCTTTTTCTGTTTTTTT-------TTGTTTATTTGGAAT------------------------TGCTTA---------------------ATT
droSim2	node_4182:437-502 -		TTCCGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACTGTATGAATGGCTA---------------TGCTTGAATTAAGTTTTT-------TTA-----------------------------------------T---------------------ATT
droSec2	scaffold_28:523053-523105 -		TGTTTTATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGA---------------GATTCGAATTGTTGAGAT-------TTATTTGATTGGCA------------------------------A---------------------CGC
droYak3	v2_chrUn_008:145339-145447 +		ATACTTGTA--------------------------------------------------------------------------------------------------------------------TAAATATATATAT-----ATTA-----------------------------------------ATATACTAATTTATAATAAATATTAAATAAATATTAA---------------ATATTCAAATATTTAATA-------T-----------------------A------------------AATATTTATATCTATTTATAAATATT
droEre2	scaffold_4820:1563075-1563147 +		GTTTTTATAT----------------------------------------------------------------------------------------------------------------------------------TAACTGC-----------------------------------------ATACTTTCA---------AATAATGAATAAACTGTAT---------------TGTATCAATTATTAGTTA-------T--------------------------------------TACACA---------------------TCT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droWil2

AATAATTTTA--TTGTTTCAGCGTAAATCTGTTTCAAATCAACATTGGAATCGTCCTATTATGCTCATGGTTCATAAACAAGATGTTGGCCTAATTTCATTGAGTAAAGTGCTGGAATACTTGGACAGACGTATTTAAATTATTTTC-----------------------------------------GGATTTCGAGATATATTAAGTATTGAATAAATTTTGA---------------AGTTTCAATTGTTGGTTT-------TTATCTATTTGGAACTGCTAAT------------------TTATCGGTTGCTTACTGCTGCTGATTGCT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.........................................................................ATAAACAAGATGTTGGCCT..................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	1	0	0

droVir3

AGAGTGCTAA---------------------------------------------------------------------------------------------------------AAAATTTGTATAAACAAATATGACTTTTAATTCAATATTTAGTTAGATATTTTATTAATTGAATTTAGATATTGCACCTCGCG----------------GTGATCTCTAA-----------------------CTGCCGATTT-------CGCATCGGT------------------------------AGCTTA---------------------TTT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.....................................................................................................................................TATGACTTTTAATTCAATATTTAGT................................................................................................................................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TTATTTTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATTATCATATTATTTATTAAATAAGAATTAG---------------ATTTTGATTAAATAATTT-------TTGTATATTTTT--------------------------------A---------------------ATT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

ATAAACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATTGAACCAATGTCAA---------------TAAGTA-------------------------------------------------------------AAG---------------------TAC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dp5

GGCATATTTC---------------------GA--------------------------------------------------------------------------------------------TAAT-----CAAAATTATTTTC-----------------------------------------ACACCTCAGGAAAACTTAAAAATAAAATACGTCCAAC---------------ATTTTCAATATT-----------------------------------------------------TGGTG---------------------TTT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.....ATTTC---------------------GA--------------------------------------------------------------------------------------------TAAT-----CAAAATTATTTTC-----------------------------------------ACACC.............................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................AAAATACGTCCAAC---------------ATTTTCAATAT...................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

TAAACCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTTAATGAAACCGGA---------------AGTTTCAATTGATAATTT-------TGAAAAATATGAAG----------------------------------------------------CTG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droAna3

ATAAAAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATAACATACTTTGA---------------GGCTTTTGTTTTTAGTTT-------TTTTGGTTGTGGAACTGACTAAATG------------------ACTTATTTTGAGTGCTTCTGAGTTTT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
No Reads

droBip1

ATTTGATTTT----------------------------------------------------------------------------------------------------------------------------------T--ATTC-----------------------------------------GGATGCCAGGACT-------TATTAAGTAATTATCAG---------------TTTACAATTTATTATTTG-------T--------------------------------------TGCTTT-------------T-------TGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GGATTAACGAAT----------------TTTAA----------------------------------------------------------------------------------------------------------TTGTT--T-----------------------------------------AAATTTTAG--------AAATTTTAAATAT-------------------------TTCTACTGT--GTTT-------TTATCTAC-TGAAAATACTATC------------------TTCTC---------------------TCT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TTTTAATTCT-------------------------------------------------------------------------------------------------------------------------------------TTTT-----------------------------------------ATGTTTTACTATTTATCAAGTATTGGATAA------------------------------------------------------------------------------------------------------------------AT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TTTAATTTTT-------------------------------------------------------------------------------------------------------------------------------------TTTA-----------------------------------------GTTCTTCGAGATATATTAATGGTTAAATATTTCAAAATTACGG---------TT----------TAAATT-------TTATCAAAATCGGAC---------------------------GAC---------------------TAA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TAAATAAAG-------------------TTGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATAAGCATGGG---------------AATTTCAATAATAATTCG-------GGATATATTTAGAATTTAATTAATTTTTTACTTCAATTTTTCTTA---TTTTTCTCATTCAAAAATGCT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TTAAATTTAG------------------TTCTT---------------------------------------------------------------------------------CAATATTTCTACTCAAATATTTATATTATTTCC-----------------------------------------GGAGTTCCA----------------AATAAAATTTCA------GAAGAAGTAGGTTCCAATTATATGCTT---------------------------------------------------T---------------------TAT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TTTAAACTAA-------------------------------------------------------------------------------------------------------------------------------------TTTT-----------------------------------------TAACTTTGACAGAAAATAATTATAAAATAAATTTAAA---------------ATTGGCAATGAATAATCG-------TCACT-------------------------------------------------------------TAT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

ATTTCATAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTCATTTATTGTTTAAAT----------------------TTTGAATTAATAACTCTTTTTTATCATCTGTTTGTGAA------------------------TTTGTT---------------------GGT	Size	Hit Count	Total Norm	Total
No Reads

dm3

TATGTTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAAAATAAAA---------------AGCTTTTTCTGTTTTTTT-------TTGTTTATTTGGAAT------------------------TGCTTA---------------------ATT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................................................................................................................................................................................................................GCTTTTTCTGTTTTTTT-------TTGTTTA..............................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................TTTTCTGTTTTTTT-------TTGT.................................................................	18	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

TTCCGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACTGTATGAATGGCTA---------------TGCTTGAATTAAGTTTTT-------TTA-----------------------------------------T---------------------ATT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------T.............................................................................................	23	2	1591.50	3183	0	0	0	0	0	0	0	0	0	0	0	0	3039	144	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TG............................................................................................	24	2	1289.00	2578	0	0	0	0	0	0	0	0	0	0	0	0	2507	71	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGAAT.....................................................................................	27	2	790.50	1581	0	0	0	0	0	0	3	1460	6	89	0	0	23	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGC...........................................................................................	25	2	560.00	1120	0	0	0	0	0	0	7	2	0	0	0	0	1068	43	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCT..........................................................................................	26	2	528.00	1056	0	0	1	0	0	0	0	0	2	2	0	0	1039	12	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------..............................................................................................	22	2	465.00	930	0	0	0	0	0	0	4	0	1	1	0	0	789	135	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGC...............................................................................................................	24	1	322.00	322	0	0	0	1	0	0	224	7	74	8	0	0	5	3	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------..............................................................................................	26	1	266.00	266	0	0	0	0	0	0	80	3	114	30	1	0	33	5	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCT..........................................................................................	24	2	148.50	297	0	4	68	18	2	2	1	0	2	1	187	0	11	1	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TA............................................................................................	24	2	126.50	253	0	0	0	0	0	0	0	0	0	0	0	0	245	8	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCTTGAAT.....................................................................................	26	2	103.50	207	0	0	0	1	0	0	51	31	44	27	0	0	52	1	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGT...........................................................................................	25	2	101.50	203	0	0	0	0	0	0	0	0	0	0	0	0	198	5	0	0	0
..................................................................................................................................................................................................TGGAATGTATTAAGTACTGTATGAATGGC...............................................................................................................	29	1	93.00	93	0	0	0	0	0	0	37	35	19	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCT..............................................................................................................	25	1	85.00	85	0	0	0	0	0	0	46	1	29	4	0	0	5	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGAATT....................................................................................	28	2	73.00	146	0	0	0	0	0	0	0	135	0	11	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGAA......................................................................................	26	2	63.00	126	0	0	0	0	0	0	0	67	6	32	0	0	21	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGA...........................................................................................	25	2	59.00	118	0	0	0	0	0	0	0	0	0	0	0	0	115	3	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------A.............................................................................................	23	2	54.00	108	0	0	0	0	0	0	0	0	0	0	0	0	69	39	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCTA.........................................................................................	27	2	53.50	107	0	0	0	0	0	0	0	0	0	0	0	0	107	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCT..............................................................................................................	19	2	49.50	99	0	0	0	0	0	0	0	0	0	0	99	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TT............................................................................................	24	2	47.00	94	0	0	0	0	0	0	0	0	0	0	0	0	86	8	0	0	0
......................................................................................................................................................................................................ATGTATTAAGTACTGTATGAATGGC...............................................................................................................	25	1	46.00	46	0	0	0	0	0	0	29	2	11	3	0	0	1	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------TGC...........................................................................................	24	2	42.00	84	0	0	0	0	0	0	23	38	0	0	0	0	21	2	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGA.......................................................................................	25	2	40.50	81	0	0	0	0	0	0	0	41	3	20	0	0	17	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCA..........................................................................................	26	2	39.00	78	0	0	0	0	0	0	0	0	0	0	0	0	78	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCT..............................................................................................................	21	2	36.50	73	6	0	0	0	0	0	1	0	1	0	1	0	49	15	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTG........................................................................................	24	2	33.00	66	0	0	0	0	0	0	0	31	5	25	0	0	5	0	0	0	0
.....................................................................................................................................................................................................AATGTATTAAGTACTGTATGAATGGC...............................................................................................................	26	1	28.00	28	0	0	0	0	0	0	20	3	2	3	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCTT.........................................................................................	27	2	27.50	55	0	0	0	0	0	0	0	0	0	0	0	0	55	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------TGCT..........................................................................................	25	2	26.00	52	0	0	3	1	0	0	3	7	2	4	1	0	30	1	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGG................................................................................................................	23	1	25.00	25	0	0	0	0	0	0	15	0	8	2	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCAA.........................................................................................	27	2	24.50	49	0	0	0	0	0	0	0	0	0	0	0	0	49	0	0	0	0
.................................................................................................................................................................................................TTGGAATGTATTAAGTACTGTATGAATGGC...............................................................................................................	30	1	22.00	22	0	0	0	0	0	0	15	5	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TATTAAGTACTGTATGAATGGCTA---------------..............................................................................................	24	1	21.00	21	0	0	0	0	0	0	8	0	6	2	1	0	3	1	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGT...............................................................................................................	24	1	20.00	20	0	0	0	0	0	0	18	0	1	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCTTGAA......................................................................................	25	2	19.50	39	0	0	0	0	2	0	1	1	2	0	0	0	33	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGC...........................................................................................	23	2	18.00	36	0	0	1	4	0	0	0	0	0	0	22	0	9	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTT---------------..............................................................................................	22	2	18.00	36	0	0	0	0	0	0	0	0	0	0	0	0	20	16	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTT.........................................................................................	23	2	17.50	35	0	0	0	1	0	0	0	25	1	7	0	0	1	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCTTGAATT....................................................................................	27	2	16.00	32	0	0	0	0	0	0	9	10	7	2	1	0	3	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGTA..............................................................................................................	25	1	15.00	15	0	0	0	0	0	0	13	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------TGC...........................................................................................	29	1	15.00	15	0	0	0	0	0	0	12	3	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------AA............................................................................................	24	2	13.50	27	0	0	0	0	0	0	0	0	0	0	0	0	24	3	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------..............................................................................................	21	2	13.00	26	0	0	0	0	0	0	6	0	10	1	1	0	8	0	0	0	0
......................................................................................................................................................................................................ATGTATTAAGTACTGTATGAATGGCTA---------------..............................................................................................	27	1	13.00	13	0	0	0	0	0	0	4	1	8	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCTT.........................................................................................	25	2	11.50	23	0	0	4	1	0	0	0	0	0	0	17	0	1	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TAA...........................................................................................	25	2	11.00	22	0	0	0	0	0	0	0	0	0	0	0	0	22	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TAT...........................................................................................	25	2	11.00	22	0	0	0	0	0	0	0	0	0	0	0	0	21	1	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------TG............................................................................................	23	2	10.50	21	0	0	0	0	0	0	3	2	0	0	0	0	16	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------..............................................................................................	20	2	10.00	20	0	0	0	1	2	0	0	0	0	0	17	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCTTG........................................................................................	28	2	9.50	19	0	0	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TG............................................................................................	22	2	9.00	18	0	0	0	0	0	0	0	0	0	0	15	0	3	0	0	0	0
..................................................................................................................................................................................................TGGAATGTATTAAGTACTGTATGAATGG................................................................................................................	28	1	9.00	9	0	0	0	0	0	0	1	1	7	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGA...............................................................................................................	24	1	8.00	8	0	0	0	0	0	0	5	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TTT...........................................................................................	25	2	7.50	15	0	0	0	0	0	0	0	0	0	0	0	0	11	4	0	0	0
..............................................................................................................................................................................................................AGTACTGTATGAATGGCT..............................................................................................................	18	2	7.50	15	0	0	0	0	0	0	0	0	0	0	15	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TTA...........................................................................................	25	2	7.00	14	0	0	0	0	0	0	0	0	0	0	0	0	10	4	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATG.................................................................................................................	22	1	7.00	7	0	0	0	0	0	0	1	0	6	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCTTG........................................................................................	26	2	7.00	14	0	0	0	1	0	0	0	0	0	0	1	0	12	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------T.............................................................................................	22	2	6.00	12	0	0	0	0	0	0	1	0	0	0	0	0	10	1	0	0	0
.....TAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACTGTA.......................................................................................................................	26	1	6.00	6	0	0	0	0	0	0	3	0	1	1	0	0	1	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCTTGA.......................................................................................	27	2	6.00	12	0	0	0	1	0	0	0	0	0	1	1	0	9	0	0	0	0
...CGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACTGTA.......................................................................................................................	28	1	6.00	6	0	0	0	0	0	0	3	2	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AGTACTGTATGAATGGCTA---------------TGCT..........................................................................................	23	2	5.50	11	0	0	1	1	0	0	0	0	0	0	6	0	2	1	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGTA..........................................................................................	26	2	5.50	11	0	0	0	0	0	0	0	0	0	0	0	0	10	1	0	0	0
..............................................................................................................................................................................................................AGTACTGTATGAATGGCTA---------------TGCTTGAAT.....................................................................................	28	2	5.50	11	0	0	0	0	0	0	1	0	1	3	0	0	4	2	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------T.............................................................................................	21	2	5.00	10	0	0	0	0	4	2	0	0	0	0	2	0	2	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------TGCTA.........................................................................................	26	2	5.00	10	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0
..............................................................................................................................................................................................................AGTACTGTATGAATGGCTA---------------TGCTT.........................................................................................	24	2	5.00	10	0	0	0	1	0	0	0	0	0	0	9	0	0	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCTTGA.......................................................................................	24	2	5.00	10	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGAA..........................................................................................	26	2	4.50	9	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------AT............................................................................................	24	2	4.50	9	0	0	0	0	0	0	0	0	0	0	0	0	5	4	0	0	0
......................................................................................................................................................................................................ATGTATTAAGTACTGTATGAATGGCT..............................................................................................................	26	1	4.00	4	0	0	0	0	0	0	2	0	1	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................ACTGTATGAATGGCTA---------------TGCT..........................................................................................	20	2	4.00	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------A.............................................................................................	27	1	4.00	4	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCTTG........................................................................................	23	2	4.00	8	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0
..................................................................................................................................................................................................TGGAATGTATTAAGTACTGTATGAATG.................................................................................................................	27	1	4.00	4	0	0	0	0	0	0	1	2	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCC..........................................................................................	24	2	4.00	8	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGAAAA....................................................................................	28	2	4.00	8	0	0	0	0	0	0	1	7	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGAC..............................................................................................................	25	1	4.00	4	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------TG............................................................................................	28	1	4.00	4	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCTTGAAA.....................................................................................	26	2	3.50	7	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGC...............................................................................................................	18	2	3.50	7	0	0	0	0	4	0	0	0	0	0	3	0	0	0	0	0	0
................................................................................................................................................................................................TTTGGAATGTATTAAGTACTGTATGAATGGC...............................................................................................................	31	1	3.00	3	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCA..............................................................................................................	25	1	3.00	3	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TGAATGGCTA---------------TGCTTGAATTAAGTTT..............................................................................	26	2	3.00	6	0	0	0	0	0	0	0	0	2	0	1	0	3	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGAAA.....................................................................................	27	2	3.00	6	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AGTACTGTATGAATGGCTA---------------TGCTTG........................................................................................	25	2	3.00	6	0	0	0	1	0	0	0	0	0	0	5	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGC...............................................................................................................	20	2	3.00	6	0	0	0	0	0	0	2	0	0	0	0	0	4	0	0	0	0
..................................................................................................................................................................................................................CTGTATGAATGGCTA---------------TGCTTGAATT....................................................................................	25	2	3.00	6	0	0	0	0	0	0	1	0	1	2	1	0	1	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCG..........................................................................................	24	2	3.00	6	0	0	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------TGCTT.........................................................................................	26	2	3.00	6	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0
.....................................................................................................................................................................................................AATGTATTAAGTACTGTATGAATGGCTA---------------..............................................................................................	28	1	3.00	3	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0
................................................................................................................................................................................................TTTGGAATGTATTAAGTACTGTA.......................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCTTGAAT.....................................................................................	29	2	3.00	6	0	0	0	0	0	0	1	0	3	0	0	0	0	2	0	0	0
................................................................................................................................................................................................TTTGGAATGTATTAAGTACTGTATGAA...................................................................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0
......AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACTGTA.......................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGG................................................................................................................	17	2	2.50	5	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGC...........................................................................................	21	2	2.50	5	3	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCT..............................................................................................................	20	2	2.50	5	1	0	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0
...........................................................................................................................................................................................................................TGGCTA---------------TGCTTGAATTAAGTTTTT-------.....................................................................	24	2	2.50	5	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCTAT........................................................................................	28	2	2.50	5	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCT..........................................................................................	21	2	2.50	5	2	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................TGAATGGCTA---------------TGCTTGAATTAAGT................................................................................	24	2	2.50	5	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0	0	0
.................................................................................................................................................................................................................ACTGTATGAATGGCTA---------------TGCTT.........................................................................................	21	2	2.50	5	0	0	0	0	2	0	0	0	0	0	2	0	1	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGAATTA...................................................................................	29	2	2.50	5	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCTTGAA......................................................................................	28	2	2.50	5	0	0	0	0	0	0	1	0	1	0	0	0	1	2	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCCT---------------..............................................................................................	26	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TGGAATGTATTAAGTACTGTATGAAT..................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................TGTATGAATGGCTA---------------TGCTTGAATT....................................................................................	24	2	2.00	4	0	0	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0
................................................................................................................................................................................................TTTGGAATGTATTAAGTACTGTATGA....................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------TGCT..........................................................................................	30	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCC..........................................................................................	26	2	2.00	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TA............................................................................................	22	2	2.00	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
..................................................................................................................................................................................................TGGAATGTATTAAGTACTGTATGAATGGCTA---------------..............................................................................................	31	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATG.................................................................................................................	16	2	2.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGAA..............................................................................................................	25	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------T.............................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------TGCTTG........................................................................................	27	2	2.00	4	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------TA............................................................................................	28	1	2.00	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AGTACTGTATGAATGGCTA---------------TGCTTGA.......................................................................................	26	2	2.00	4	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	0
.TCCGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTA............................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................TTGGAATGTATTAAGTACTGTATGAATGG................................................................................................................	29	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCA..............................................................................................................	21	2	2.00	4	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0
.........................................................................................................................................................................................................TATTAAGTACTGTATGAATGGCT..............................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
....................................................................................................................................................................................................GAATGTATTAAGTACTGTATGAATGGC...............................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCT..........................................................................................	22	2	1.50	3	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGAAA.........................................................................................	27	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCTAA........................................................................................	28	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0
..................................................................................................................................................................................................................CTGTATGAATGGCTA---------------TGCT..........................................................................................	19	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
...........................................................................................................................................................................................................................TGGCTA---------------TGCTTGAATTAAGTTTTT-------TTA-----------------------------------------.........................	27	2	1.50	3	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TAAA..........................................................................................	26	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0
....................................................................................................................................................................................................................GTATGAATGGCTA---------------TGCT..........................................................................................	17	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..............................................................................................................................................................................................................AGTACTGTATGAATGGCTA---------------TGCTTGAA......................................................................................	27	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0
.TCCGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTA...................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................TTGGAATGTATTAAGTACTGT........................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TATGAATGGCTA---------------TGCTTGAATTAAGT................................................................................	26	2	1.00	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
TTCCGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAG..............................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................TTGGAATGTATTAAGTACTGTATGAA...................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGTC..............................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGAT......................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
...............................................................................................................................................................................................................GTACTGTATGAATGGCTA---------------TGCTTGAAAAT...................................................................................	29	2	1.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................AATGTATTAAGTACTGTATGAATGG................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.TCCGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTAC...........................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................TTGGAATGTATTAAGTACTGTATGAATG.................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GGAATGTATTAAGTACTGTAT......................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------TGCTTGA.......................................................................................	28	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCTTGAATTA...................................................................................	28	2	1.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TTTGGAATGTATTAAGTACTGTATG.....................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................AATGTATTAAGTACTGTATGAATGGCT..............................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TATTAAGTACTGTATGAATGGCTA---------------TGC...........................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................ACTGTATGAATGGCTA---------------TGCTTGAAT.....................................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------CTA...........................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------G.............................................................................................	23	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
...............................................................................................................................................................................................................................TA---------------TGCTTGAATTAAGT................................................................................	16	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.....TAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACTGT........................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................ATGTATTAAGTACTGTATGAATGGT...............................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TGGAATGTATTAAGTACTGTATGA....................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TCTA..........................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.................................................................................................................................................................................................................ACTGTATGAATGGCTA---------------..............................................................................................	16	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.......................................................................................................................................................................................................TGTATTAAGTACTGTATGAATGGCTA---------------TT............................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCTTGA.......................................................................................	29	2	1.00	2	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................CTGTATGAATGGCTA---------------TGCTTG........................................................................................	21	2	1.00	2	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0
.......A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACT..........................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGGCTA---------------TGCA..........................................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.......................................................................................................................................................................................................................TGAATGGCTA---------------TGCTTGAATTAAGTT...............................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.........................................................................................................................................................................................................TATTAAGTACTGTATGAATGGCTA---------------TGCT..........................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................ATGAATGGCTA---------------TGCT..........................................................................................	15	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------T.............................................................................................	18	2	1.00	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TATTAAGTACTGTATGAATGG................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................TTGGAATGTATTAAGTACTGTATGA....................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACTGTATGAA...................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCTTA........................................................................................	28	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
...................................................................................................................................................................................................................TGTATGAATGGCTA---------------TGCTTGAAT.....................................................................................	23	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGCTTT........................................................................................	28	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.........................................................................................................................................................................................................TATTAAGTACTGTATGAATGGT...............................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TGGAATGTATTAAGTACTGTATGAATGGCT..............................................................................................................	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TC............................................................................................	24	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.........................................................................................................................................................................................................TATTAAGTACTGTATGAATGGTA..............................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................GTATGAATGGCTA---------------TGCTTG........................................................................................	19	2	1.00	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TATTAAGTACTGTATGAATGGCTA---------------A.............................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
....GTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATT.................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGCTC.........................................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................................................................................................................................GGAATGTATTAAGTACTGTA.......................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.......A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGAATGTATTAAGTACTGTA.......................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCG..............................................................................................................	19	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................AAGTACTGTATGAATGGCTA---------------TGA...........................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------TGTAA.........................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................AATGGCTA---------------TGCTTGAATTAAGTTTTT-------.....................................................................	26	2	0.50	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TAAGTACTGTATGAATGG................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TACTGTATGAATGGCTA---------------TGCTTGAT......................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................TTAAGTACTGTATGAATGGCTA---------------GT............................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0

droSec2

TGTTTTATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGA---------------GATTCGAATTGTTGAGAT-------TTATTTGATTGGCA------------------------------A---------------------CGC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

droYak3

ATACTTGTA--------------------------------------------------------------------------------------------------------------------TAAATATATATAT-----ATTA-----------------------------------------ATATACTAATTTATAATAAATATTAAATAAATATTAA---------------ATATTCAAATATTTAATA-------T-----------------------A------------------AATATTTATATCTATTTATAAATATT

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEre2

GTTTTTATAT----------------------------------------------------------------------------------------------------------------------------------TAACTGC-----------------------------------------ATACTTTCA---------AATAATGAATAAACTGTAT---------------TGTATCAATTATTAGTTA-------T--------------------------------------TACACA---------------------TCT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dwi_2433

scf2_1100000004902:1179904-1180054 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-22.0	-21.8	-21.8