ID:

dwi_2410

 Coordinate:

scf2_1100000004902:64009-64159 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-8.8 -8.7 -8.6

Flybase annnotation

exon [dwil_GLEANR_11752:1]; CDS [Dwil\GK11552-cds]; intron [Dwil\GK11552-in]

No Repeatable elements found

mature
star
  1. scf2_1100000004851:537361-537383 -
  2. dwi_2410  scf2_1100000004902:64029-64051 +

Sense Strand Reads

--------------------------------------############---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCAAAAGGAGCATTATTTATTGCAACATCGTACACACCATGGACGAATATGTAAGCGCCGAGACAATCATAGAGTTAATCAAAAAATTGTTAAAATTTATAAAAGATGCACACATATCAACTAATTTGGTTTGCTTTGTGTTGACGGCAATCCGATTAATGTGAGAGTGCGAAATTATTTCCTAACTACTAACGGAAAAGTCCCATTTGTTTGGGATTACTTTCATTTCAATGAAGTAATGCTCAAACATG
**********************************************************************(((((.((((((((((((.....)))))......((((......))))......))))))).))))).......(((....)))..*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body
......................CAACATCGTACACACCATGGACG.............................................................................................................................................................................................................. 23 0 2 2.00 4 2 2 0
.....................................................................................................................................................................................CTAACTACTAACGGAAAAGTCCCA.............................................. 24 0 2 1.50 3 3 0 0
.......................................TGGACGAATATGTAAGCGCCGAG............................................................................................................................................................................................. 23 0 2 1.00 2 2 0 0
.......................................TGGACGAATATGTAAGCGCCGAGA............................................................................................................................................................................................ 24 0 2 1.00 2 2 0 0
.....................................................................................................................................................................................CTAACTACTAACGGAAAAGTCCCAT............................................. 25 0 2 1.00 2 2 0 0
...................................................................................................................................TGCTTTGTGTTGACGGCAATCCGAT............................................................................................... 25 0 1 1.00 1 1 0 0
......................................................................AGAGTTAATCAAAAAATTGTTAA.............................................................................................................................................................. 23 0 2 1.00 2 2 0 0
.....................................................................................................................................................................................CTAACTACTAACGGAAAAGTCCCATT............................................ 26 0 2 1.00 2 1 1 0
.......................AACATCGTACACACCATGGACGA............................................................................................................................................................................................................. 23 0 2 1.00 2 2 0 0
......................CAACATCGTACACACCATGGACGAA............................................................................................................................................................................................................ 25 0 2 1.00 2 2 0 0
.......................................TGGACGAATATGTAAGCGCCGAGACA.......................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0
.............................................................................................................................................TGACGGCAATCCGATTAATGTGAGAG.................................................................................... 26 0 3 0.67 2 0 2 0
.....................................................................................................................................................................................CTAACTACTAACGGAAAAGTCCC............................................... 23 0 3 0.67 2 2 0 0
............................................................................................................................................................TAATGTGAGAGTGCGAAATTATTTC...................................................................... 25 0 3 0.67 2 2 0 0
.................................................................................................................................................................TGAGAGTGCGAAATTATTTCCTAAC................................................................. 25 0 3 0.67 2 0 2 0
.................................................................................................................................................................................................................TTTGGGATTACTTTCATTTCAATGAAG............... 27 0 3 0.67 2 1 1 0
..................................................................................................................................................................GAGAGTGCGAAATTATTTCCTAAC................................................................. 24 0 3 0.67 2 2 0 0
.................................................TGTAAGCGCCGAGACAATCATAGAGT................................................................................................................................................................................ 26 0 3 0.67 2 0 2 0
...........................................CGAATATGTAAGCGCCGAGACAAT........................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0
..............ATTTATTGCAACATCGTACACACCAT................................................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0
..........................................................................................................................................................................................TACTAACGGAAAAGACCCATTT........................................... 22 1 2 0.50 1 0 1 0
..........................................................................................................................................................................................TACTAACGGAAAAGTCCCATTTGT......................................... 24 0 2 0.50 1 1 0 0
....................................................................ATAGAGTTAATCAAAAAATTGTTAAAA............................................................................................................................................................ 27 0 2 0.50 1 0 0 1
............................CGTACACACCATGGACGAATATGTAAG.................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0
....................................CCATGGACGAATATGTAAGCGCCG............................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0
........................................GGACGAATATGTAAGCGCCGAGA............................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0
..........................................................................................................................................................................................TACTAACGGAAAAGTCCCATTTGTT........................................ 25 0 2 0.50 1 0 1 0
....................................................................................................................................................................................................................................CAATGAAGTAATGCTCAAACATG 23 0 4 0.50 2 2 0 0
................................CACACCATGGACGAATATGTAAGCG.................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0
.......................AACATCGTACACACCATGGACG.............................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0
.......................AACATCGTACACACCATGGAC............................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0
.................................ACACCATGGACGAATATGTAAGCGCCG............................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0
.....................................................................................................................................................................................................................................AATGAAGTAATGCTCAAACATG 22 0 4 0.50 2 2 0 0
..........................................................................................................................................................................................................CCATTTGTTTGGGATTACTTTCATTT....................... 26 0 2 0.50 1 1 0 0
........................ACATCGTACACACCATGGACGAA............................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0
.................................ACACCATGGACGAATATGTAAGC................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0
..................................................GTAAGCGCCGAGACAATCATA.................................................................................................................................................................................... 21 0 3 0.33 1 0 1 0
............................................................................................................................................................TAATGTGAGAGTGCGAAATTATTTCC..................................................................... 26 0 3 0.33 1 0 1 0
.............................................................................................................................................TGACGGCAATCCGATTAATGTGAGAGTG.................................................................................. 28 0 3 0.33 1 1 0 0
............................................................................................................................................................TAATGTGAGAGTGCGAAATTATTTCCA.................................................................... 27 1 3 0.33 1 0 1 0
.................................................................................................................................................................TGAGAGTGCGAAATTATTTCCTAACA................................................................ 26 1 3 0.33 1 0 1 0
.................................................................................................................................................................................................................TTTGGGATTACTTTCATTTCAATGA................. 25 0 3 0.33 1 0 1 0
...................................................................CATAGAGTTAATCAAAAAATTG.................................................................................................................................................................. 22 0 3 0.33 1 1 0 0
...................................................TAAGCGCCGAGACAATCATAGAGT................................................................................................................................................................................ 24 0 3 0.33 1 0 1 0
..............................................................................................................................................................ATGTGAGAGTGCGAAATTATTTC...................................................................... 23 0 3 0.33 1 0 0 1
.........................................................................................................................................................GATTAATGTGAGAGTGCTAAATT........................................................................... 23 1 3 0.33 1 1 0 0
...................................................................................................................................................CAATCCGATTAATGTGAGAGTGCG................................................................................ 24 0 3 0.33 1 0 0 1
............................................................................................................................................................TAATGTGAGAGTGCGAAATTATTTCCT.................................................................... 27 0 3 0.33 1 1 0 0
..................................................................................................................................................................GAGAGTGCGAAATTATTTCCT.................................................................... 21 0 3 0.33 1 0 1 0
.......................................................................................................................................................................TGCGAAATTCTTTCCTAACTACT............................................................. 23 1 3 0.33 1 1 0 0
...............................................................................................................................................................TGTGAGAGTGCGAAATTATTTC...................................................................... 22 0 3 0.33 1 1 0 0
.............................................................................................................................................................AATGTGAGAGTGCGAAAT............................................................................ 18 0 3 0.33 1 0 1 0
........................................................................................................................................................................GCGAAATTATTTCCTAACTACTAA........................................................... 24 0 3 0.33 1 1 0 0
.............................................................................................................................................................AATGTGAGAGTGCGAAATTATTTCCT.................................................................... 26 0 3 0.33 1 0 1 0
.................................................................................................................................................................................................................TTTGGGATTACCTTCATTTCAATGAAG............... 27 1 3 0.33 1 1 0 0
.................................................TGTAAGCGCCGAGACAATCATAG................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0
..................................................................................................................................................................................................................TTGGGATTACTTTCATTTCAATGAAGTA............. 28 0 3 0.33 1 1 0 0
.......................................................................................................................................................................TGCGAAATTATTTCCTAACTACTA............................................................ 24 0 3 0.33 1 1 0 0
................................................................................................................................................................................................................................ATTTCAATGAAGTAATGCTCAAACA.. 25 0 4 0.25 1 1 0 0
.................................................................................................................................................................................................................................TTTCAATGAAGTAATGCTCAAACA.. 24 0 4 0.25 1 1 0 0
................................................................................................................................................................................................................................ATTTCAATGAAGTAATGCTCA...... 21 0 4 0.25 1 1 0 0
...............................................................................................................................................................................................................................CATTTCAATGAAGTAATGCTCAAACA.. 26 0 4 0.25 1 1 0 0
.................................................................................................................................................................................................................................TTTCAATGAAGTAATGCTCAAAC... 23 0 4 0.25 1 1 0 0
...................................................................................................................................................................................................AAAAGTCCCATTTGTTTGGGATT................................. 23 0 4 0.25 1 1 0 0
..................................CAACATGGATGAATATGTA...................................................................................................................................................................................................... 19 2 10 0.10 1 1 0 0

Anti-sense strand reads

GGTTTTCCTCGTAATAAATAACGTTGTAGCATGTGTGGTACCTGCTTATACATTCGCGGCTCTGTTAGTATCTCAATTAGTTTTTTAACAATTTTAAATATTTTCTACGTGTGTATAGTTGATTAAACCAAACGAAACACAACTGCCGTTAGGCTAATTACACTCTCACGCTTTAATAAAGGATTGATGATTGCCTTTTCAGGGTAAACAAACCCTAATGAAAGTAAAGTTACTTCATTACGAGTTTGTAC
***********************************************************************************************(((((.((((((((((((.....)))))......((((......))))......))))))).))))).......(((....)))..********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
..................................................................................................................................................................................AAGGATTGATGATTGCCTTTTCAGGGT.............................................. 27 0 2 126.00 252 62 188 2 0 0
.....................................................................................................................................................TAGGCTAATTACACTCTCACGCTTTAAT.......................................................................... 28 0 3 113.00 339 292 45 1 1 0
...................................................................................................................................................................................AGGATTGATGATTGCCTTTTCAGGGT.............................................. 26 0 2 105.00 210 36 174 0 0 0
..........................................................................................................................................ACAACTGCCGTTAGGCTAATTACACTCT..................................................................................... 28 0 3 52.33 157 103 51 3 0 0
.................................................................................................................................................................................AAAGGATTGATGATTGCCTTTTCAGGGT.............................................. 28 0 2 47.50 95 72 22 1 0 0
...........................................................................................................................................................................................................................GAAAGTAAAGTTACTTCATTACGAGTT..... 27 0 3 28.67 86 11 73 2 0 0
.....................................................TCGCGGCTCTGTTAGTATCTCAATT............................................................................................................................................................................. 25 0 2 28.50 57 52 1 0 4 0
...........................................................................................................................................................................................................GTAAACAAACCCTAATGAAAGTAAAGT..................... 27 0 2 27.50 55 41 14 0 0 0
..........................................................................................................................................ACAACTGCCGTTAGGCTAATTACACT....................................................................................... 26 0 3 24.67 74 50 24 0 0 0
...........................................................................................................................................CAACTGCCGTTAGGCTAATTACACTCT..................................................................................... 27 0 3 23.00 69 57 12 0 0 0
......................................................................................................................................................AGGCTAATTACACTCTCACGCTTTAAT.......................................................................... 27 0 3 22.00 66 35 31 0 0 0
....................................................................................................................................................................................GGATTGATGATTGCCTTTTCAGGGT.............................................. 25 0 2 21.00 42 11 31 0 0 0
..............................................................................................................................................................TACACTCTCACGCTTTAATAAAGGAT................................................................... 26 0 3 20.67 62 29 33 0 0 0
...........................................................................................................................................................................................................................GAAAGTAAAGTTACTTCATTACGAGT...... 26 0 3 20.67 62 19 42 1 0 0
.....................................................TCGCGGCTCTGTTAGTATCTCAAT.............................................................................................................................................................................. 24 0 2 20.50 41 34 4 1 2 0
....................................................................................................................................................................CTCACGCTTTAATAAAGGATTGATGAT............................................................ 27 0 3 19.33 58 48 10 0 0 0
...................................................................................................................................................................TCTCACGCTTTAATAAAGGATTGAT............................................................... 25 0 3 18.67 56 47 8 1 0 0
.......................................................................................................................................................GGCTAATTACACTCTCACGCTTTAAT.......................................................................... 26 0 3 18.33 55 38 17 0 0 0
......................................................................................................................................................................CACGCTTTAATAAAGGATTGATGAT............................................................ 25 0 3 18.00 54 51 3 0 0 0
............................................................................................................................................................................TTAATAAAGGATTGATGATTGCCTT...................................................... 25 0 3 17.67 53 43 10 0 0 0
.............................................................................................................................................ACTGCCGTTAGGCTAATTACACTCT..................................................................................... 25 0 3 16.33 49 34 14 0 0 1
............................................................................................................................................................................TTAATAAAGGATTGATGATTGCCT....................................................... 24 0 3 16.00 48 30 18 0 0 0
..........................................................................................................................................ACAACTGCCGTTAGGCTAATTACAC........................................................................................ 25 0 3 15.67 47 28 19 0 0 0
.............................................................................................................................................................................................................AAACAAACCCTAATGAAAGTAAAGT..................... 25 0 3 15.00 45 28 17 0 0 0
............................................................................................................................................AACTGCCGTTAGGCTAATTACACTCT..................................................................................... 26 0 3 14.00 42 35 7 0 0 0
...................................................................................................................................................................TCTCACGCTTTAATAAAGGATTGATGAT............................................................ 28 0 3 13.00 39 35 4 0 0 0
...........................AGCATGTGTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 26 0 2 11.50 23 15 8 0 0 0
................................................................................................................................................GCCGTTAGGCTAATTACACTCTCACGCT............................................................................... 28 0 3 10.67 32 31 1 0 0 0
......................................................CGCGGCTCTGTTAGTATCTCAATTAGT.......................................................................................................................................................................... 27 0 2 10.00 20 16 3 0 1 0
...........................................................................................................................................CAACTGCCGTTAGGCTAATTACACT....................................................................................... 25 0 3 10.00 30 28 2 0 0 0
................................................................................................................GTATAGTTGATTAAACCAAACGAAACA................................................................................................................ 27 0 7 9.57 67 19 48 0 0 0
.....................................................................................................................................................TAGGCTAATTACACTCTCACGCTTTAA........................................................................... 27 0 3 9.33 28 28 0 0 0 0
.................................................................................................................................................................................AAAGGATTGATGATTGCCTTTTCAGGG............................................... 27 0 3 9.33 28 15 13 0 0 0
................................................................................................................GTATAGTTGATTAAACCAAACGAAAC................................................................................................................. 26 0 7 9.00 63 21 41 0 1 0
.......................................................GCGGCTCTGTTAGTATCTCAATTAGT.......................................................................................................................................................................... 26 0 2 8.00 16 15 1 0 0 0
................................................................................................................................................GCCGTTAGGCTAATTACACTCTCACGCTT.............................................................................. 29 0 3 7.00 21 20 1 0 0 0
............................................................................................................................................................................TTAATAAAGGATTGATGATTGCCTTTT.................................................... 27 0 3 6.67 20 17 3 0 0 0
..................................................................................................................................................CGTTAGGCTAATTACACTCTCACGCT............................................................................... 26 0 3 6.67 20 13 6 1 0 0
...........................................................................................................................................................................TTTAATAAAGGATTGATGATTGCCT....................................................... 25 0 3 6.00 18 13 5 0 0 0
......................................................................................................................................................................................................TCAGGGTAAACAAACCCTAATGAAAGT.......................... 27 0 2 6.00 12 4 8 0 0 0
.........CGTAATAAATAACGTTGTAGCATGT......................................................................................................................................................................................................................... 25 0 2 5.50 11 8 3 0 0 0
.....................................................................................................................................................................TCACGCTTTAATAAAGGATTGATGAT............................................................ 26 0 3 5.33 16 10 6 0 0 0
...................................................................................................................................................GTTAGGCTAATTACACTCTCACGCT............................................................................... 25 0 3 5.00 15 6 8 0 1 0
......................................................CGCGGCTCTGTTAGTATCTCAATT............................................................................................................................................................................. 24 0 2 5.00 10 8 0 2 0 0
............................................................................................................................................................................TTAATAAAGGATTGATGATTGCCTTT..................................................... 26 0 3 5.00 15 12 3 0 0 0
.......................................................GCGGCTCTGTTAGTATCTCAATTAGTT......................................................................................................................................................................... 27 0 2 5.00 10 8 2 0 0 0
.........CGTAATAAATAACGTTGTAGCATGTGT....................................................................................................................................................................................................................... 27 0 2 5.00 10 5 5 0 0 0
........................................................................................................................................................................................TGATGATTGCCTTTTCAGGGTAAAC.......................................... 25 0 2 5.00 10 4 6 0 0 0
.....................................................................................................................................................TAGGCTAATTACACTCTCACGCTT.............................................................................. 24 0 3 4.67 14 13 0 0 0 1
........................................................................................................................................................GCTAATTACACTCTCACGCTTTAAT.......................................................................... 25 0 3 4.67 14 11 3 0 0 0
............................................................................................................................................................................................................TAAACAAACCCTAATGAAAGTAAAGT..................... 26 0 2 4.50 9 6 3 0 0 0
........................................................CGGCTCTGTTAGTATCTCAATTAGT.......................................................................................................................................................................... 25 0 2 4.50 9 8 1 0 0 0
...............................................................................................................................................................................................TGCCTTTTCAGGGTAAACAAACCCTAAT................................ 28 0 2 4.50 9 5 4 0 0 0
.....................................................TCGCGGCTCTGTTAGTATCTCAATTAGT.......................................................................................................................................................................... 28 0 2 4.50 9 9 0 0 0 0
..................................................................................................................................................................................AAGGATTGATGATTGCCTTTTCAGGG............................................... 26 0 3 4.33 13 9 4 0 0 0
................................................................................................................................................GCCGTTAGGCTAATTACACTCTCACGC................................................................................ 27 0 3 4.33 13 12 1 0 0 0
........................................................CGGCTCTGTTAGTATCTCAATTAGTT......................................................................................................................................................................... 26 0 2 4.00 8 6 2 0 0 0
.........................................................................................................................................................................GCTTTAATAAAGGATTGATGATTGCCT....................................................... 27 0 3 4.00 12 12 0 0 0 0
..........................................................................................................................................ACAACTGCCGTTAGGCTAATTACACTC...................................................................................... 27 0 3 4.00 12 11 1 0 0 0
.........................GTAGCATGTGTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 28 0 2 4.00 8 8 0 0 0 0
...............................................................................................................................................................................................................................GTAAAGTTACTTCATTACGAGTTTGT.. 26 0 4 4.00 16 0 15 0 0 1
............................................................................................................................................AACTGCCGTTAGGCTAATTACACT....................................................................................... 24 0 3 3.67 11 8 3 0 0 0
....................................................TTCGCGGCTCTGTTAGTATCTCAATT............................................................................................................................................................................. 26 0 2 3.50 7 6 0 0 1 0
.................................................................................................................................................................................................................................AAAGTTACTTCATTACGAGTTTGT.. 24 0 4 3.25 13 9 4 0 0 0
...................................................................................................................................................................TCTCACGCTTTAATAAAGGATTGATGA............................................................. 27 0 3 3.00 9 8 1 0 0 0
...........................................................................................................................................CAACTGCCGTTAGGCTAATTACACTC...................................................................................... 26 0 3 3.00 9 9 0 0 0 0
.........................................................GGCTCTGTTAGTATCTCAATTAGTT......................................................................................................................................................................... 25 0 2 3.00 6 2 4 0 0 0
...................................................ATTCGCGGCTCTGTTAGTATCTCAAT.............................................................................................................................................................................. 26 0 2 3.00 6 5 0 0 1 0
.....................CGTTGTAGCATGTGTGGTACCTGCT............................................................................................................................................................................................................. 25 0 2 3.00 6 1 4 1 0 0
...................................................ATTCGCGGCTCTGTTAGTATCTCAATT............................................................................................................................................................................. 27 0 2 3.00 6 5 0 1 0 0
.................................................................................................................................................................................................................................AAAGTTACTTCATTACGAGTTTGTAC 26 0 4 2.75 11 5 5 0 0 1
...................................................................................................................................................................................AGGATTGATGATTGCCTTTTCAGGGTA............................................. 27 0 2 2.50 5 0 5 0 0 0
.......................................................................................................................................................................................................CAGGGTAAACAAACCCTAATGAAAGT.......................... 26 0 2 2.50 5 3 2 0 0 0
...............................................................................................................................................................................................TGCCTTTTCAGGGTAAACAAACCCT................................... 25 0 2 2.50 5 3 2 0 0 0
............................GCATGTGTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 25 0 2 2.50 5 5 0 0 0 0
....................................................................................................................................................TTAGGCTAATTACACTCTCACGCTTTAAT.......................................................................... 29 0 3 2.33 7 7 0 0 0 0
...................................................................................................................................................GTTAGGCTAATTACACTCTCACGCTT.............................................................................. 26 0 3 2.33 7 3 4 0 0 0
..................................................................................................................................................CGTTAGGCTAATTACACTCTCACGCTT.............................................................................. 27 0 3 2.33 7 4 3 0 0 0
..........................................................................................................................................................................CTTTAATAAAGGATTGATGATTGCCT....................................................... 26 0 3 2.33 7 2 5 0 0 0
.................................................................................................................................................................ACTCTCACGCTTTAATAAAGGATTGAT............................................................... 27 0 3 2.00 6 6 0 0 0 0
...................................................................................................................................................................................................................ACCCTAATGAAAGTAAAGTTACTTCAT............. 27 0 3 2.00 6 6 0 0 0 0
..............................................................................................................GTGTATAGTTGATTAAACCAAACGA.................................................................................................................... 25 0 2 2.00 4 2 2 0 0 0
.........................................................GGCTCTGTTAGTATCTCAATTAGTTTT....................................................................................................................................................................... 27 0 2 2.00 4 1 3 0 0 0
............................................................................................................GTGTGTATAGTTGATTAAACCAAAC...................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0
......................................................CGCGGCTCTGTTAGTATCTCAATTAGTT......................................................................................................................................................................... 28 0 2 2.00 4 4 0 0 0 0
............................................................................................TTTAAATATTTTCTACGTGTGTAT....................................................................................................................................... 24 0 1 2.00 2 1 1 0 0 0
..........................TAGCATGTGTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 27 0 2 2.00 4 3 1 0 0 0
....................................................TTCGCGGCTCTGTTAGTATCTCAAT.............................................................................................................................................................................. 25 0 2 2.00 4 4 0 0 0 0
..................................GTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 19 0 2 2.00 4 3 1 0 0 0
.............................................................................................................................................................................................................AAACAAACCCTAATGAAAGTAAAGTTACT................. 29 0 3 2.00 6 6 0 0 0 0
.................................................ACATTCGCGGCTCTGTTAGTATCTCAAT.............................................................................................................................................................................. 28 0 2 2.00 4 4 0 0 0 0
.................................TGTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 20 0 2 2.00 4 1 3 0 0 0
.............................................................................................................................................ACTGCCGTTAGGCTAATTACACT....................................................................................... 23 0 3 2.00 6 2 4 0 0 0
.........................................................GGCTCTGTTAGTATCTCAATTAGT.......................................................................................................................................................................... 24 0 2 2.00 4 4 0 0 0 0
.......................................................................................................................................AACACAACTGCCGTTAGGCTAATTACAC........................................................................................ 28 0 1 2.00 2 2 0 0 0 0
...............................................................................................................................................TGCCGTTAGGCTAATTACACTCTCACGC................................................................................ 28 0 3 2.00 6 6 0 0 0 0
..........................................................................................................................................................................................................GGTAAACAAACCCTAATGAAAGTAAAGT..................... 28 0 2 2.00 4 3 1 0 0 0
................................................................................................................................................................................................................CAAACCCTAATGAAAGTAAAGTTACTT................ 27 0 3 2.00 6 6 0 0 0 0
......................................................................................................................................................................CACGCTTTAATAAAGGATTGATGA............................................................. 24 0 3 2.00 6 6 0 0 0 0
....................................................................................................................................................................CTCACGCTTTAATAAAGGATTGATGATT........................................................... 28 0 3 2.00 6 5 1 0 0 0
......................................................................................................................................................................CACGCTTTAATAAAGGATTGATGATT........................................................... 26 0 3 2.00 6 6 0 0 0 0
...........................................................................................................................................................................TTTAATAAAGGATTGATGATTGCCTT...................................................... 26 0 3 2.00 6 2 4 0 0 0
..............................................................................................................................................................................................................................AGTAAAGTTACTTCATTACGAGTTTGT.. 27 0 4 1.75 7 2 5 0 0 0
..............................................................................................................................................................TACACTCTCACGCTTTAATAAAGGATT.................................................................. 27 0 3 1.67 5 1 4 0 0 0
....................................................................................................................................................ATAGGCTAATTACACTCTCACGCTTTAAT.......................................................................... 29 1 3 1.67 5 5 0 0 0 0
...........................................................................................................................................CAACTGCCGTTAGGCTAATTACAC........................................................................................ 24 0 3 1.67 5 5 0 0 0 0
...............................................................................................................................................TGCCGTTAGGCTAATTACACTCTCAC.................................................................................. 26 0 3 1.67 5 4 1 0 0 0
................................................................................................................................................GCCGTTAGGCTAATTACACTCT..................................................................................... 22 0 3 1.67 5 3 1 1 0 0
.................................................................................................................................................................................AAAGGATTGATGATTGCCTTTTCAGG................................................ 26 0 3 1.67 5 1 4 0 0 0
..............................................................................................................................................CTGCCGTTAGGCTAATTACACTCT..................................................................................... 24 0 3 1.67 5 5 0 0 0 0
..........................................................................................................................................AAAACTGCCGTTAGGCTAATTACACTCT..................................................................................... 28 1 3 1.67 5 5 0 0 0 0
....................................................................................................................................................................................GGATTGATGATTGCCTTTTCAGGGTA............................................. 26 0 2 1.50 3 1 2 0 0 0
........................................................................................................................................................................................TGATGATTGCCTTTTCAGGGTAAA........................................... 24 0 2 1.50 3 1 2 0 0 0
.....................................................................................................................................................................................................TTCAGGGTAAACAAACCCTAATGAAAGT.......................... 28 0 2 1.50 3 2 1 0 0 0
......................................................CGCGGCTCTGTTAGTATCTCAATTAG........................................................................................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
.......................................................GCGGCTCTGTTAGTATCTCAATTAG........................................................................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
................................GTGTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 21 0 2 1.50 3 1 1 0 1 0
...............................................................................................................................................TGCCGTTAGGCTAATTACACTCTCACGCT............................................................................... 29 0 3 1.33 4 4 0 0 0 0
.....................................................................................................................................................TAGGCTAATTACACTCTCACGCTTTAATA......................................................................... 29 0 3 1.33 4 4 0 0 0 0
...............................................................................................................................................................................................................ACAAACCCTAATGAAAGTAAAGTTACTT................ 28 0 3 1.33 4 4 0 0 0 0
................................................................................................................................................GCCGTTAGGCTAATTACACTCTCAC.................................................................................. 25 0 3 1.33 4 4 0 0 0 0
...................................................................................................................................................................TCTCACGCTTTAATAAAGGATTGA................................................................ 24 0 3 1.33 4 4 0 0 0 0
..............................................................................................................................................CTGCCGTTAGGCTAATTACACT....................................................................................... 22 0 3 1.33 4 3 1 0 0 0
.............................................................................................................................................................................................................................AAGTAAAGTTACTTCATTACGAGTTTGT.. 28 0 3 1.33 4 4 0 0 0 0
...........................................................................................................................................AAACTGCCGTTAGGCTAATTACACTCT..................................................................................... 27 1 3 1.33 4 3 1 0 0 0
............................................................................................................................................................................TTAATAAAGGATTGATGATTGCC........................................................ 23 0 3 1.33 4 3 1 0 0 0
................................................................................................................................................................CACTCTCACGCTTTAATAAAGGATTGAT............................................................... 28 0 3 1.33 4 4 0 0 0 0
...........................................................................................................................................................................................................................GAAAGTAAAGTTACTTCATTACGAGTTT.... 28 0 3 1.33 4 2 1 1 0 0
...................................................................................................................................................................................AGGATTGATGATTGCCTTTTCAGGG............................................... 25 0 3 1.33 4 2 2 0 0 0
...............................................................................................................................................TGCCGTTAGGCTAATTACACTCT..................................................................................... 23 0 3 1.33 4 4 0 0 0 0
.............................................................................................................................................ACTGCCGTTAGGCTAATTACAC........................................................................................ 22 0 3 1.33 4 3 1 0 0 0
.............................................................................................................................................................................TAATAAAGGATTGATGATTGCCTTTT.................................................... 26 0 3 1.33 4 3 1 0 0 0
.................................................................................................................................................................................................................AAACCCTAATGAAAGTAAAGTTACTTCAT............. 29 0 3 1.33 4 4 0 0 0 0
............................................................................................................................................AACTGCCGTTAGGCTAATTACACTC...................................................................................... 25 0 3 1.33 4 4 0 0 0 0
.................................................................................................................................................................................................................AAACCCTAATGAAAGTAAAGTTACTT................ 26 0 3 1.33 4 4 0 0 0 0
.....................................................................................................................................................TAGGCTAATTACACTCTCACGCT............................................................................... 23 0 3 1.33 4 2 2 0 0 0
...............................................................................................................................................................................................................................GTAAAGTTACTTCATTACGAGTT..... 23 0 4 1.25 5 0 4 0 0 1
............................................................................................................GTGTGTATAGTTGATTAAACCAAACGA.................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.................................................................................TTTTTAACAATTTTAAATATTTTCTA................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................CGTTAGGCTAATTACACTCTCACGC................................................................................ 25 0 3 1.00 3 2 1 0 0 0
........................................................................................................CTACGTGTGTATAGTTGATTAAACCA......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................TTAACAATTTTAAATATTTTCTACGT............................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................................AGTTGATTAAACCAAACTAAACAC............................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
...........................AGCATGTGTGGTACCTGCTTATACATT..................................................................................................................................................................................................... 27 0 2 1.00 2 1 1 0 0 0
..................................................................................................................................................................................TAGGATTGATGATTGCCTTTTCAGGGT.............................................. 27 1 2 1.00 2 0 2 0 0 0
.............................................................................................................................................ACTGCCGTTAGGCTAATTACACTCTCAC.................................................................................. 28 0 3 1.00 3 3 0 0 0 0
...........................................................................................................................................................................TTTAATAAAGGATTGATGATTGC......................................................... 23 0 3 1.00 3 3 0 0 0 0
............................................................................................................................................................................................................................AAAGTAAAGTTACTTCATTACGAGTTTGT.. 29 0 3 1.00 3 3 0 0 0 0
..........................................................................................................................CTAAACCAAACGAAACACAACT........................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................TTGATGATTGCCTTTTCAGGGT.............................................. 22 0 2 1.00 2 1 1 0 0 0
..................................................................................................................................................................................AAGGATTGATGATTGCCTTTTCAGG................................................ 25 0 3 1.00 3 0 3 0 0 0
..................................GTGGTACCTGCTTATACATT..................................................................................................................................................................................................... 20 0 2 1.00 2 2 0 0 0 0
................................................................................................................................................GCCGTTAGGCTAATTACACTCTCA................................................................................... 24 0 3 1.00 3 3 0 0 0 0
.........................................................GGCTCTGTTAGTATCTCAATTAGTTT........................................................................................................................................................................ 26 0 2 1.00 2 1 1 0 0 0
.....................................................................................................................................................TAGGCTAATTACACTCTCACGCTTT............................................................................. 25 0 3 1.00 3 3 0 0 0 0
......................................................CGCGGCTCTGTTAGTATCTCAAT.............................................................................................................................................................................. 23 0 2 1.00 2 2 0 0 0 0
...........................................GCTTATACATTCGCGGCTCTGTTAGT...................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
..................................................CATTCGCGGCTCTGTTAGTATCTCAAT.............................................................................................................................................................................. 27 0 2 1.00 2 2 0 0 0 0
..................................................................................................................................................................................AATGATTGATGATTGCCTTTTCAGGGT.............................................. 27 1 2 1.00 2 0 2 0 0 0
...................................................................................................ATTTTCTACGTGTGTATAGTTGAT................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................ACGAAACACAACTGCCGTTAGGCTAAT............................................................................................. 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................CGCTTTAATAAAGGATTGATGATTGCCT....................................................... 28 0 3 1.00 3 2 1 0 0 0
..............................................................................................................................................................................................................AACAAACCCTAATGAAAGTAAAGTTACTT................ 29 0 3 1.00 3 3 0 0 0 0
........................................................................................................................................................................................TGATGATTGCCTTTTCAGGGTAAACA......................................... 26 0 2 1.00 2 1 1 0 0 0
.............................................................................................................TGTGTATAGTTGATTAAACCAAACGA.................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................TAAACAAACCCTAATGAAAGTAAAGTT.................... 27 0 2 1.00 2 0 2 0 0 0
................................GTGTGGTACCTGCTTATACATTCGC.................................................................................................................................................................................................. 25 0 2 1.00 2 1 1 0 0 0
.......................................................................................................TCTACGTGTGTATAGTTGATTAAACCA......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................ACACAACTGCCGTTAGGCTAAT............................................................................................. 22 0 1 1.00 1 1 0 0 0 0
..............................................................................................TAAATATTTTCTACGTGTGTATAGTTGAT................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................ACACAACTGCCGTTAGGCTAATTACAC........................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................CACAACTGCCGTTAGGCTAATTACACT....................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................TAAACCAAACGAAACACAACTGCCGT...................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................AACTGCCGTTAGGCTAATTACAC........................................................................................ 23 0 3 1.00 3 3 0 0 0 0
................................................................................................................................................................................................................CAAACCCTAATGAAAGTAAAGTTACT................. 26 0 3 1.00 3 3 0 0 0 0
.....................................................TCGCGGCTCTGTTAGTATCTCAATTAGTT......................................................................................................................................................................... 29 0 2 1.00 2 2 0 0 0 0
.................................................................................................................................................................................GAAGGATTGATGATTGCCTTTTCATGGT.............................................. 28 2 2 1.00 2 2 0 0 0 0
.....................................................................................................................GTTGATTAAACCAAACGAAACACA.............................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
....................................................................................................................AGTTGATTAAACCAAACGAAACACAACT........................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................TAGGCTAATTACACTCTCACGCTTTAATC......................................................................... 29 1 3 1.00 3 3 0 0 0 0
..................................................................................................................ATAGTTGATTAAACCAAACGAAACA................................................................................................................ 25 0 9 0.89 8 4 4 0 0 0
................................................................................................................................................................................................................................TAAAGTTACTTCATTACGAGTTTGT.. 25 0 4 0.75 3 2 0 1 0 0
................................................................................................................GTATAGTTGATTAAACCAAACGAAA.................................................................................................................. 25 0 7 0.71 5 3 2 0 0 0
.................................................................................................................................................................................AAAGGATTGATGATTGCCTTTTCA.................................................. 24 0 3 0.67 2 2 0 0 0 0
....................................................................................................................................................................CTCACGCTTTAATAAAGGATTGATGA............................................................. 26 0 3 0.67 2 2 0 0 0 0
.....................................................................................................................................................TAGGCTAATTACACCCTCACGCTTTAAT.......................................................................... 28 1 3 0.67 2 2 0 0 0 0
..............................................................................................................................................................................................................AACAAACCCTAATGAAAGTAAAGT..................... 24 0 3 0.67 2 1 1 0 0 0
....................................................................................................................................................................................GGATTGATGATTGCCTTTTCAGGG............................................... 24 0 3 0.67 2 2 0 0 0 0
.................................................................................................................................................CCGTTAGGCTAATTACACTCTCACGC................................................................................ 26 0 3 0.67 2 2 0 0 0 0
............................................................................................................................................AACTGCCGTTAGGCTAATTACACTCTCAC.................................................................................. 29 0 3 0.67 2 1 0 0 1 0
..........................................................................................................................................ACAACTGCCGTTAGGCGAATTACACTCT..................................................................................... 28 1 3 0.67 2 2 0 0 0 0
.....................................................................................................................................................TAGGCTAATTACACTCACACGCTTTAAT.......................................................................... 28 1 3 0.67 2 2 0 0 0 0
............................................................................................................................................................................TTAATAAAGGATTGATGAT............................................................ 19 0 3 0.67 2 1 1 0 0 0
..................................................................................................................................................................................................................AACCCTAATGAAAGTAAAGTTACTT................ 25 0 3 0.67 2 2 0 0 0 0
.............................................................................................................................................................................TAATAAAGGATTGATGATTGCCTT...................................................... 24 0 3 0.67 2 1 1 0 0 0
...............................................................................................................................................................ACACTCTCACGCTTTAATAAAGGATTGAT............................................................... 29 0 3 0.67 2 2 0 0 0 0
..................................................................................................................................................................................AAGGATTGATGATTGCCTTTTCAGGT............................................... 26 1 3 0.67 2 0 2 0 0 0
................................................................................................................................................................AACTCTCACGCTTTAATAAAGGATTGAT............................................................... 28 1 3 0.67 2 2 0 0 0 0
..........................................................................................................................................ACAACTGCCGTTAGGCTAATTACA......................................................................................... 24 0 3 0.67 2 2 0 0 0 0
..............................................................................................................................................................TACACTCTCACGCTTTAATAAAGGA.................................................................... 25 0 3 0.67 2 2 0 0 0 0
...............................................................................................................................................................ACACTCTCACGCTTTAATAAAGGAT................................................................... 25 0 3 0.67 2 1 1 0 0 0
.....................................................................................................................................................TAGGCTAATTACACTATCACGCTTTAAT.......................................................................... 28 1 3 0.67 2 0 2 0 0 0
...........................................................................................................................................CAACTGCCGTTAGGCTAATTA........................................................................................... 21 0 3 0.67 2 2 0 0 0 0
......................................................................................................................................................................CACGCTTTAATAAAGGATTGATGATTGC......................................................... 28 0 3 0.67 2 1 1 0 0 0
.............................................................................................................................................................................TAATAAAGGATTGATGATTGCCT....................................................... 23 0 3 0.67 2 1 1 0 0 0
...................................................................................................................................................................................................................ACCCTAATGAAAGTAAAGTTACTT................ 24 0 3 0.67 2 1 1 0 0 0
..................................................................................................................................................................................................................AACCCTAATGAAAGTAAAGTTACTTCAT............. 28 0 3 0.67 2 2 0 0 0 0
.................................................................................................................................................................................AAAGGATTGATGATTGCCTTTTCAG................................................. 25 0 3 0.67 2 1 1 0 0 0
.............................................................................................................................................................TTACACTCTCACGCTTTAATAAAGGAT................................................................... 27 0 3 0.67 2 1 1 0 0 0
......................................................................................................................................................................CACGCTTTAATAAAGGATTGATGATTG.......................................................... 27 0 3 0.67 2 2 0 0 0 0
...........................................................................................................................................CAACTGCCGTTAGACTAATTACACT....................................................................................... 25 1 3 0.67 2 2 0 0 0 0
.........CGTAATAAATAACGTTGTAGCATG.......................................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................GGATTGATGATTGCCTTTTAAGGGT.............................................. 25 1 2 0.50 1 0 1 0 0 0
...................AACGTTGTAGCATGTGTGGTA................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................AGTATTGATGATTGCCTTTTCAGGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
..................................................AATTCGCGGCTCTGTTAGTATCTCAAT.............................................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................AGGATTGATGATTGCCTTTTCATGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
...........................................................................................................................................................................................................GTAAACAAACCCTAATGAAAGTAAAG...................... 26 0 2 0.50 1 1 0 0 0 0
.................................................ACATTCGCGGCTCTGTTAGTATCTCAATT............................................................................................................................................................................. 29 0 2 0.50 1 1 0 0 0 0
...............................................................................................................TGTATAGTTGATTAAACCAAACGAA................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0
........TCGTAATAAATAACGTTGTAGCAT........................................................................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0
.........................GTAGCATGTGTGGTACTTGCTTATACAT...................................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
...............................................................................................................TGTATAGTTGATTAAACCAAACGAAAC................................................................................................................. 27 0 2 0.50 1 0 1 0 0 0
..........................TAGCATGTGTGGTACCTGCTAT........................................................................................................................................................................................................... 22 2 2 0.50 1 1 0 0 0 0
............................................................TCTGTTAGTATCTCAATTAGTTTTT...................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
........................TGTAGCATGTGTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
........................................................CGGCTCTGTTAGTATCTCAATTAG........................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
..................................................CATTCGCGGCTCTGTTAGTATCTCAATT............................................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0
.....................................................TCGCGGCTCTGTTAGTATCTCAATG............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
.......................................................GCCGCTCTGTTAGTATCTCAATTAGT.......................................................................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0
.................................................................................................................................................................................AAAGGATTGATTATTGCCTTTTCAGGGT.............................................. 28 1 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................AACGATTGATGATTGCCTTTTCAGGGT.............................................. 27 1 2 0.50 1 0 1 0 0 0
......................GTTGTAGCATGTGTGGTACCTGCT............................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................GATTGATGATTGCCTTTTCAGGGTAAAC.......................................... 28 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................CGATTGATGATTGCCTTTTCAGGGT.............................................. 25 1 2 0.50 1 0 1 0 0 0
...............................TGTGTGGTACCTGCTTATACAT...................................................................................................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0
..............................................................................................................GTGTATAGTTGATTCAACCAAACGAAAC................................................................................................................. 28 1 2 0.50 1 0 1 0 0 0
........................................................................................................................................................................................TGATGATTGCCTTTTCAGGGTAAACAA........................................ 27 0 2 0.50 1 1 0 0 0 0
...............................TGTGTGGTACCTGCTTATACATTCGC.................................................................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0
.....................CGTTGTAGCATTTTTGGTACCTGCT............................................................................................................................................................................................................. 25 2 2 0.50 1 0 1 0 0 0
........................................................CGGCTCTGTTAGTATCTCAATTAGTA......................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................TGATGATTGCCTTTTCAGGGTAGAC.......................................... 25 1 2 0.50 1 1 0 0 0 0
.........................................CTGCTTATACATTCGCGGCTCTGTTAG....................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.................................TGTGGTACCTGCTTATACATTCG................................................................................................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0
............AATAAATAACGTTGTAGCATGTGTGGT.................................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
......CCTCGTAATAAATAACGTTGTAGCATG.......................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................AGGATTCATGATTGCCTTTTCAGGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
.................................................................................................................................................................................AAGGATTTGATGATTGCCTTTTCAGGGT.............................................. 28 3 2 0.50 1 1 0 0 0 0
..........................................................GCTCTGTTAGTATCTCAATTAGTT......................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................GTAGACAAACCCTAATGAAAGTAAAGT..................... 27 1 2 0.50 1 0 1 0 0 0
........................................................................................................................................................................................TGATGATTGCCTTTTCAGAGTAAA........................................... 24 1 2 0.50 1 0 1 0 0 0
..................................................................................................................................................................................AAGGATTGACGATTGCCTTTTCAGGGT.............................................. 27 1 2 0.50 1 0 1 0 0 0
......CCTCGTAATAAATAACGTTGTAGCATGT......................................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................GTAAACAAACCCTAATGAAAGTAAAGTT.................... 28 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................AAGGATTGATGATTGACTTTTCAGGGT.............................................. 27 1 2 0.50 1 0 1 0 0 0
...........................................................................................................................................................................................................GTAAACAAACCCTAATGAAAGTA......................... 23 0 2 0.50 1 1 0 0 0 0
....................................................CTCGCGGCTCTGTTAGTATCTCAAT.............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................ATAAACAAACCCTAATGAAAGTAAAGT..................... 27 1 2 0.50 1 0 1 0 0 0
..................................................................................................................................................................................AAGGATTGATGATTGCCTTTTCCGGGT.............................................. 27 1 2 0.50 1 0 1 0 0 0
.................................TGTGGTACCTGCTTATACATTCGCGGC............................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.......................................ACCTGCTTATACATTCGCGGCTCTGTT......................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.........................................CTGCTTATACATTCGCGGCTCTG........................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................TCAGGGTAAACAAACCCTAATGAAAG........................... 26 0 2 0.50 1 1 0 0 0 0
..................................................TGATCGCGGCTCTGTTAGTATCTCAATT............................................................................................................................................................................. 28 3 2 0.50 1 1 0 0 0 0
...........................AGCATGTGTGGTGCCTGCTTATACAT...................................................................................................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0
....TTCCTCGTAATAAATAACGTTGTAGCATG.......................................................................................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................AAGGATTGATGATTGCCCTTTCAGGGT.............................................. 27 1 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................................TTTCAGGGTAAACAAACCCTAATGAAAGT.......................... 29 0 2 0.50 1 1 0 0 0 0
.............................................................CTGTTAGTATCTCAATTAGT.......................................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0
....TTCCTCGTAATAAATAACGTTGTAGCA............................................................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................GGATTGATGATTGCCTTTTCAGGGTAA............................................ 27 0 2 0.50 1 0 1 0 0 0
...................................................................................................................................................................................AGGATTGATGATTGCCTTTTCCGGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
...................................................................................................................................................................................AGAATTGATGATTGCCTTTTCAGGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
...................................................................................................................................................................................................TTTTCAGGGTAAACAAACCCTAATGA.............................. 26 0 2 0.50 1 1 0 0 0 0
.....................CGTTGTAGTATGTGTGGTACCT................................................................................................................................................................................................................ 22 1 2 0.50 1 0 1 0 0 0
...................................................................................................................................................................................AAGATTGATGATTGCCTTTTCAGGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
.........CGTAATAAATAACGTTGTAGCATGTGTA...................................................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................AAGGATTGATGATTGCCTTTTCAGGGTG............................................. 28 1 2 0.50 1 1 0 0 0 0
.........................................................GGCTCTGTTAGTATCTCAATTAG........................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
......CCTCGTAATAAATAACGTTGTAGC............................................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................TAAAGGATTGATGATTGCCTTTTCAGGGT.............................................. 29 0 2 0.50 1 1 0 0 0 0
....................TCGTTGTAGCATGTGTGGTACCTGC.............................................................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................GGGATTGATGATTGCCTTTTCAGGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
.........CGTAATAAATAACGTTGTAGCATGTGTG...................................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
.............................CATGTGTGGTACCTGCTTAT.......................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
............AATAAATAACGTTGTAGCATGTGT....................................................................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0
...............................................................................................................................................................................................TGCCTTTTCAGGGTAAACAAA....................................... 21 0 2 0.50 1 0 0 1 0 0
.......CTCGTAATAAATAACGTTGTGGCAT........................................................................................................................................................................................................................... 25 1 2 0.50 1 0 1 0 0 0
.....................................................TCGCGGCTCTGTTAGTATCTCAATTG............................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................TAAACAAACCCTAATGAAAGTAAA....................... 24 0 2 0.50 1 1 0 0 0 0
....................................GGTACCTGCTTATACATTCGCGGCTCT............................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................GAAGGATTGATGATTGCCTTTTCAGGGT.............................................. 28 1 2 0.50 1 1 0 0 0 0
.....TCCTCGTAATAAATAACGTTGTAGCATG.......................................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0
....................................................TTCGCGGCTCTGTTAATATCTCAATT............................................................................................................................................................................. 26 1 2 0.50 1 0 0 1 0 0
........................................................CGGCTCTGTTATTATCTCAATTAGT.......................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................AGGATTGATTATTGCCTTTTCAGGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
...................................................................................................................................................................................AGGATTGATGGTTGCCTTTTCAGGGT.............................................. 26 1 2 0.50 1 0 1 0 0 0
...................AACGTTGTATCATGTGTGGTACCT................................................................................................................................................................................................................ 24 1 2 0.50 1 1 0 0 0 0
..................................................TATTCGCGGCTCTGTTAGTATCTCAATT............................................................................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
...............CAATAACGTTGTAGCATGTGTGGTACCT................................................................................................................................................................................................................ 28 1 2 0.50 1 1 0 0 0 0
.................................TGTGGTACCTGCTTATACATTCGC.................................................................................................................................................................................................. 24 0 2 0.50 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004902:63959-64209 + dwi_2410 CCAAAAGGAGCATTATTTATTGCAACATCGTACACACCATGGACGAATATGTAAGCGCCGAGACAATCATAGAGTTAATCAAAAAATTGTTAAAATTTATAAAAGATGCACACATATCAACTAATTTGGTTTGCTTTGTGTTGACGGCAATCCGATTAATGTGAGAGTGCGAAATTATTTCCTAACTACTAACGGAAAAGTCCCATTTGTTTGGGATTACTTTCATTTCAATGAAGTAATGCTCAAACATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CCAAAAGGAGCATTATTTATTGCAACATCGTACACACCATGGACGAATATGTAAGCGCCGAGACAATCATAGAGTTAATCAAAAAATTGTTAAAATTTATAAAAGATGCACACATATCAACTAATTTGGTTTGCTTTGTGTTGACGGCAATCCGATTAATGTGAGAGTGCGAAATTATTTCCTAACTACTAACGGAAAAGTCCCATTTGTTTGGGATTACTTTCATTTCAATGAAGTAATGCTCAAACATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................CAACATCGTACACACCATGGACG..............................................................................................................................................................................................................2322.00402020
.....................................................................................................................................................................................CTAACTACTAACGGAAAAGTCCCA..............................................2421.50303000
.......................................TGGACGAATATGTAAGCGCCGAG.............................................................................................................................................................................................2321.00202000
.......................................TGGACGAATATGTAAGCGCCGAGA............................................................................................................................................................................................2421.00202000
.....................................................................................................................................................................................CTAACTACTAACGGAAAAGTCCCAT.............................................2521.00202000
...................................................................................................................................TGCTTTGTGTTGACGGCAATCCGAT...............................................................................................2511.00101000
......................................................................AGAGTTAATCAAAAAATTGTTAA..............................................................................................................................................................2321.00202000
.....................................................................................................................................................................................CTAACTACTAACGGAAAAGTCCCATT............................................2621.00201010
.......................AACATCGTACACACCATGGACGA.............................................................................................................................................................................................................2321.00202000
......................CAACATCGTACACACCATGGACGAA............................................................................................................................................................................................................2521.00202000
.......................................TGGACGAATATGTAAGCGCCGAGACA..........................................................................................................................................................................................2621.00202000
.............................................................................................................................................TGACGGCAATCCGATTAATGTGAGAG....................................................................................2630.67200020
.....................................................................................................................................................................................CTAACTACTAACGGAAAAGTCCC...............................................2330.67202000
............................................................................................................................................................TAATGTGAGAGTGCGAAATTATTTC......................................................................2530.67202000
.................................................................................................................................................................TGAGAGTGCGAAATTATTTCCTAAC.................................................................2530.67200020
.................................................................................................................................................................................................................TTTGGGATTACTTTCATTTCAATGAAG...............2730.67201010
..................................................................................................................................................................GAGAGTGCGAAATTATTTCCTAAC.................................................................2430.67202000
.................................................TGTAAGCGCCGAGACAATCATAGAGT................................................................................................................................................................................2630.67200020
...........................................CGAATATGTAAGCGCCGAGACAAT........................................................................................................................................................................................2420.50101000
..............ATTTATTGCAACATCGTACACACCAT...................................................................................................................................................................................................................2620.50100010
..........................................................................................................................................................................................TACTAACGGAAAAGTCCCATTTGT.........................................2420.50101000
....................................................................ATAGAGTTAATCAAAAAATTGTTAAAA............................................................................................................................................................2720.50100100
............................CGTACACACCATGGACGAATATGTAAG....................................................................................................................................................................................................2720.50101000
....................................CCATGGACGAATATGTAAGCGCCG...............................................................................................................................................................................................2420.50101000
........................................GGACGAATATGTAAGCGCCGAGA............................................................................................................................................................................................2320.50101000
..........................................................................................................................................................................................TACTAACGGAAAAGTCCCATTTGTT........................................2520.50100010
....................................................................................................................................................................................................................................CAATGAAGTAATGCTCAAACATG2340.50202000
................................CACACCATGGACGAATATGTAAGCG..................................................................................................................................................................................................2520.50101000
.......................AACATCGTACACACCATGGACG..............................................................................................................................................................................................................2220.50101000
.......................AACATCGTACACACCATGGAC...............................................................................................................................................................................................................2120.50101000
.................................ACACCATGGACGAATATGTAAGCGCCG...............................................................................................................................................................................................2720.50101000
.....................................................................................................................................................................................................................................AATGAAGTAATGCTCAAACATG2240.50202000
..........................................................................................................................................................................................................CCATTTGTTTGGGATTACTTTCATTT.......................2620.50101000
........................ACATCGTACACACCATGGACGAA............................................................................................................................................................................................................2320.50101000
.................................ACACCATGGACGAATATGTAAGC...................................................................................................................................................................................................2320.50101000
..................................................GTAAGCGCCGAGACAATCATA....................................................................................................................................................................................2130.33100010
............................................................................................................................................................TAATGTGAGAGTGCGAAATTATTTCC.....................................................................2630.33100010
.............................................................................................................................................TGACGGCAATCCGATTAATGTGAGAGTG..................................................................................2830.33101000
............................................................................................................................................................TAATGTGAGAGTGCGAAATTATTTCCA....................................................................2730.33100010
.................................................................................................................................................................TGAGAGTGCGAAATTATTTCCTAACA................................................................2630.33100010
.................................................................................................................................................................................................................TTTGGGATTACTTTCATTTCAATGA.................2530.33100010
...................................................................CATAGAGTTAATCAAAAAATTG..................................................................................................................................................................2230.33101000
...................................................TAAGCGCCGAGACAATCATAGAGT................................................................................................................................................................................2430.33100010
..............................................................................................................................................................ATGTGAGAGTGCGAAATTATTTC......................................................................2330.33100100
...................................................................................................................................................CAATCCGATTAATGTGAGAGTGCG................................................................................2430.33100100
............................................................................................................................................................TAATGTGAGAGTGCGAAATTATTTCCT....................................................................2730.33101000
..................................................................................................................................................................GAGAGTGCGAAATTATTTCCT....................................................................2130.33100010
...............................................................................................................................................................TGTGAGAGTGCGAAATTATTTC......................................................................2230.33101000
.............................................................................................................................................................AATGTGAGAGTGCGAAAT............................................................................1830.33100010
........................................................................................................................................................................GCGAAATTATTTCCTAACTACTAA...........................................................2430.33101000
.............................................................................................................................................................AATGTGAGAGTGCGAAATTATTTCCT....................................................................2630.33100010
.................................................TGTAAGCGCCGAGACAATCATAG...................................................................................................................................................................................2330.33101000
..................................................................................................................................................................................................................TTGGGATTACTTTCATTTCAATGAAGTA.............2830.33101000
.......................................................................................................................................................................TGCGAAATTATTTCCTAACTACTA............................................................2430.33101000
................................................................................................................................................................................................................................ATTTCAATGAAGTAATGCTCAAACA..2540.25101000
.................................................................................................................................................................................................................................TTTCAATGAAGTAATGCTCAAACA..2440.25101000
................................................................................................................................................................................................................................ATTTCAATGAAGTAATGCTCA......2140.25101000
...............................................................................................................................................................................................................................CATTTCAATGAAGTAATGCTCAAACA..2640.25101000
.................................................................................................................................................................................................................................TTTCAATGAAGTAATGCTCAAAC...2340.25101000
...................................................................................................................................................................................................AAAAGTCCCATTTGTTTGGGATT.................................2340.25101000

Generated: 05/18/2015 at 04:25 AM