ID:

dwi_2368

Coordinate:

scf2_1100000004887:355536-355686 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-9.0 -8.7 -8.6

Flybase annnotation

CDS [Dwil\GK16088-cds]; exon [dwil_GLEANR_16461:1]; intron [Dwil\GK16088-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-14_DWil-I-intLTRGypsy+
mature
  1. dwi_2368  scf2_1100000004887:355556-355578 +
  2. scf2_1100000004933:119780-119802 +
  3. scf2_1100000004958:2497179-2497201 -
star
  1. dwi_2368  scf2_1100000004887:355610-355634 +
  2. scf2_1100000004933:119834-119858 +
  3. scf2_1100000004958:2497123-2497147 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGGAAGCTATCCTGTCTGCTATGCGGAACCTGCAGCAAAAACATGACATGGTAGAAACTTACTACGTTAAATTTCGAGCACTACACAGGTTGTATGTGGAAAAAATCAATGAAGGACCTTTATCGGCTGAACTAAAAGAATCCACACTCCGACAACAAGAAGTAAACAGCTCATGCGAATTTATTCGCAACCTAAACCGGGAACTAAGGATACATCTCTTGCATTTCGTTCCGACAAACTTAAACGCCGCA
**********************************************************************........................((((((.............((.((......))))............))))))...******************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M045
female body
V118
embryo
V117
male body
......................................................................ATTTCGAGCACTACACAGGTTGT.............................................................................................................................................................. 23 0 3 3.00 9 9 0 0
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGACA............... 23 0 3 2.67 8 8 0 0
......................................AAACATGACATGGTAGAAACTTA.............................................................................................................................................................................................. 23 0 1 2.00 2 2 0 0
......................................AAACATGACATGGTAGAAACTTAC............................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGACAAACT........... 27 0 3 2.00 6 6 0 0
............................................................................................................................GGCTGAACTAAAAGAATCCACACTC...................................................................................................... 25 0 3 1.67 5 5 0 0
......................................................................ATTTCGAGCACTACACAGGTTGTATG........................................................................................................................................................... 26 0 3 1.33 4 2 2 0
......................................................................ATTTCGAGCACTACACAGGTTG............................................................................................................................................................... 22 0 3 1.33 4 2 2 0
...........................................................TACTACGTTAAATTTCGAGCACTA........................................................................................................................................................................ 24 0 3 1.00 3 3 0 0
.................................AGCAAAAACATGACATGGTAGAAA.................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0
...........................................TGACATGGTAGAAACTTACTACG......................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0
...........................................TGACATGGTAGAAACTTACTACGT........................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0
.......................................AACATGACATGGTAGAAACTTACTACGT........................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0
...............................GCAGCAAAAACATGACATGGT....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
............................CCTGCAGCAAAAACATGACATGGTA...................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGAC................ 22 0 3 1.00 3 3 0 0
..................................................................................................................................................................TAAACAGCTCATGCGAATTTATTCG................................................................ 25 0 3 1.00 3 0 3 0
......................GCGGAACCTGCAGCAAAAACATGA............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0
..............................................................................................................................................................GAAGTAAACAGCTCATGCGAATT...................................................................... 23 0 2 1.00 2 1 1 0
......................................................................................................................................................................................................................TCTCTTGCATTTCGTTCCGACA............... 22 0 3 1.00 3 3 0 0
.......................................................................................................AATCAATGAAGGACCTTTATCGG............................................................................................................................. 23 0 3 0.67 2 1 1 0
...................................................................................................................................................................AAACAGCTCATGCGAATTTATTCG................................................................ 24 0 3 0.67 2 1 1 0
.......................................................................TTTCGAGCACTACACAGGTTGT.............................................................................................................................................................. 22 0 3 0.67 2 2 0 0
..................................................................................................................................ACTAAAAGAATCCACACTCCGA................................................................................................... 22 0 3 0.67 2 2 0 0
........................................................................................................................................................................................TCGCAACCTAAACCGGGAACTAAGGA......................................... 26 0 3 0.67 2 2 0 0
....................................................................................................................................TAAAAGAATCCACACTCCGACAACAA............................................................................................. 26 0 3 0.67 2 0 2 0
............................................................................................................................................................AAGAAGTAAACAGCTCATGCGAAT....................................................................... 24 0 2 0.50 1 1 0 0
.......TATCCTGTCTGCTATGCGGAACCTGCAG........................................................................................................................................................................................................................ 28 0 2 0.50 1 1 0 0
..GAAGCTATCCTGTCTGCTATGCGGA................................................................................................................................................................................................................................ 25 0 2 0.50 1 0 1 0
......................................................................................................................................................GACAACAAGAAGTAAACAGCTCATGC........................................................................... 26 0 2 0.50 1 1 0 0
..............................................................................................................................................................GAAGTAAACAGCTCATGCGAATTT..................................................................... 24 0 2 0.50 1 1 0 0
........ATCCTGTCTGCTATGCGGAACCTGC.......................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0
.....GCTATCCTGTCTGCTATGCGGAACCT............................................................................................................................................................................................................................ 26 0 2 0.50 1 0 0 1
..........................................................................................................................................................ACAAGAAGTAAACAGCTCATGCGAATA...................................................................... 27 1 2 0.50 1 1 0 0
.......................................................................................................................................................ACAACAAGAAGTAAACAGCTCATG............................................................................ 24 0 2 0.50 1 1 0 0
..........................................................................................................................................................ACAAGAAGTAAACAGCTCATGCG.......................................................................... 23 0 2 0.50 1 1 0 0
............TGTCTGCTATGCGGAACCTGC.......................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0
................................................................................................................................................CACTCCGACAACAAGAAGTAAAC.................................................................................... 23 0 2 0.50 1 1 0 0
...........CTGTCTGCTATGCGGAACCTGCAGCA...................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0
...........................................................................................................................................................CAAGAAGTAAACAGCTCATGCGAATT...................................................................... 26 0 2 0.50 1 0 1 0
............................................................................................................................GGCTGAACTAAAAGAATCCACACT....................................................................................................... 24 0 3 0.33 1 1 0 0
..........................................................................................................................................................................................GCAACCTAAACCGGGAACTAAGGATACA..................................... 28 0 3 0.33 1 1 0 0
..............................................................................................TGTGGAAAAAATCAATGAAGGAC...................................................................................................................................... 23 0 3 0.33 1 1 0 0
..............................................................................................................................CTGAACTAAAAGAATCCACACTCCGAC.................................................................................................. 27 0 3 0.33 1 1 0 0
...............................................................................................................................TGAACTAAAAGAATCCACACTCCGAC.................................................................................................. 26 0 3 0.33 1 1 0 0
..................................................................................................................................................................................................................................CGTTCCGACAAACTTAAACGCCGCA 25 0 3 0.33 1 1 0 0
...................................................................................................AAAAAATCAATGAAGGACCTTTAT................................................................................................................................ 24 0 3 0.33 1 1 0 0
........................................................................TTCGAGCACTACACAGGTTGTATG........................................................................................................................................................... 24 0 3 0.33 1 0 1 0
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGACAA.............. 24 0 3 0.33 1 1 0 0
..........................................................................................................................................................................................................................TTGCATTTCGTTCCGACAAACTT.......... 23 0 3 0.33 1 1 0 0
.........................................................................TCGAGCACTACACAGGTTGTA............................................................................................................................................................. 21 0 3 0.33 1 1 0 0
...............................................................................................................................TGAACTAAAAGAATCCACACTC...................................................................................................... 22 0 3 0.33 1 1 0 0
......................................................................................................................................AAAGAATCCACACTCCGACAACA.............................................................................................. 23 0 3 0.33 1 1 0 0
.........................................................................................................................................................................................CGCAACCTAAACCGGGAACTAAGGA......................................... 25 0 3 0.33 1 1 0 0
............................................................................................................................................................................................AACCTAAACCGGGAACTAAGGAT........................................ 23 0 3 0.33 1 1 0 0
............................................................................................................................................................................................................................GCATTTCGTTCCGACAAACT........... 20 0 3 0.33 1 1 0 0
......................................................................................................................................................................................................................TCTCTTGCATTTCGTTCCGACAAACT........... 26 0 3 0.33 1 0 1 0
..................................................................................................................................................................................................................................CGTTCCGACAAACTTAAACGCCG.. 23 0 3 0.33 1 1 0 0
...................................................................................................AAAAAATCAATGAAGGACCTTT.................................................................................................................................. 22 0 3 0.33 1 1 0 0
..................................................................................................................................................................TAAACAGCTCATGCGAATTTATTCGCAACC........................................................... 30 0 3 0.33 1 0 1 0
.....................................................................................................AAAATCAATGAAGGACCTTTATC............................................................................................................................... 23 0 3 0.33 1 0 1 0
................................................................................................TGGAAAAAATCAATGAAGGACCTTTA................................................................................................................................. 26 0 3 0.33 1 1 0 0
...................................................................TAAATTTCGAGCACTACACAGGTTG............................................................................................................................................................... 25 0 3 0.33 1 0 1 0
......................................................................ATTTCGAGCACGACACAGGTTGTATG........................................................................................................................................................... 26 1 3 0.33 1 1 0 0
.........................................................................................................................ATCGGCTGAACTAAAAGAATCCACA......................................................................................................... 25 0 3 0.33 1 1 0 0
......................................................................ATTTCGAGCACTACACAGGTT................................................................................................................................................................ 21 0 3 0.33 1 1 0 0
........................................................................TTCGAGCACTACACAGGTTGTATGTG......................................................................................................................................................... 26 0 3 0.33 1 0 1 0
.........................................................................................................................................................................................................................CTTGCATTTCGTTCCGACAAACT........... 23 0 3 0.33 1 1 0 0
....................................................................................ACAGGTTGTATGTGGAAAAAATCA............................................................................................................................................... 24 0 3 0.33 1 1 0 0
.......................................................................................................AATCAATGAAGGACCTTTATCGGCTG.......................................................................................................................... 26 0 3 0.33 1 1 0 0
........................................................................................................................................................................................TCGCAACCTAAACCGGGAACTA............................................. 22 0 3 0.33 1 1 0 0
......................................................................ATTTCGAGCACTACACAGGTTGTA............................................................................................................................................................. 24 0 3 0.33 1 0 1 0
...........................................................TACTACGTTAAATTTCGAGCACTACA...................................................................................................................................................................... 26 0 3 0.33 1 1 0 0
....................................................................................................AAAAATCAATGAAGGACCTTTAT................................................................................................................................ 23 0 3 0.33 1 1 0 0
...........................................................TACTACGTTAAATTTCGAGCACTACACA.................................................................................................................................................................... 28 0 3 0.33 1 1 0 0
................................................................................................................................................................................................TAAACCGGGAACTAAGGATACATCTCT................................ 27 0 3 0.33 1 1 0 0
...........................................................................................................................................................................................................GTAAGGATACATCTCTTGCATTTCG....................... 25 1 3 0.33 1 1 0 0
.......................................................................................................AATCAATGAAGGACCTTTATC............................................................................................................................... 21 0 3 0.33 1 1 0 0
...................................................................................................................................................................................................................ACATCTCTTGCATTTCGTTCC................... 21 0 3 0.33 1 1 0 0
..................................................................................................................................ACTAAAAGAATCCACACTCCGACA................................................................................................. 24 0 3 0.33 1 1 0 0
..........................................................................................................................................................................................GCAACCTAAACCGGGAACTAAGGATA....................................... 26 0 3 0.33 1 1 0 0
..............................................................................................................................CTGAACTAAAAGAATCCACACTC...................................................................................................... 23 0 3 0.33 1 1 0 0
.....................................................................................................................................................................................TATTCGCAACCTAAACCGGGAACTA............................................. 25 0 3 0.33 1 0 1 0
.............................................................................................................................GCTGAACTAAAAGAATCCACACTCCG.................................................................................................... 26 0 3 0.33 1 1 0 0
............................................................................................................................................................................................................TAAGGATACATCTCTTGCATT.......................... 21 0 3 0.33 1 0 1 0
....................................................................................ACAGGTTGTATGTGGAAAAAATCAA.............................................................................................................................................. 25 0 3 0.33 1 0 1 0
............................................................ACTACGTTAAATTTCGAGCACTACACA.................................................................................................................................................................... 27 0 3 0.33 1 1 0 0
.....................................................................................................AAAATCAATGAAGGACCTTTATCGGC............................................................................................................................ 26 0 3 0.33 1 0 1 0
..........................................................................................TGTATGTGGAAAAAATCAATGAAGGA....................................................................................................................................... 26 0 3 0.33 1 0 1 0
............................................................................................................................GGCTGAACTAAAAGAATCCACA......................................................................................................... 22 0 3 0.33 1 1 0 0
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGACAAACTG.......... 28 1 3 0.33 1 1 0 0
.................................................................................................................................AACTAAAAGAATCCACACTCCGACA................................................................................................. 25 0 3 0.33 1 1 0 0
..............................................................................................................................CTGAACTAAAAGAATCCACACTCCGA................................................................................................... 26 0 3 0.33 1 1 0 0
.........................................................................................................................ATCGGCTGAACTAAAAGAATCCA........................................................................................................... 23 0 3 0.33 1 1 0 0
..................................................................TTAAATTTCGAGCACTACACAGGTTG............................................................................................................................................................... 26 0 3 0.33 1 0 1 0
............................................................................................................................GGCTGAACTAAAAGAATCCACACTCC..................................................................................................... 26 0 3 0.33 1 1 0 0
.........................................................................................................................................................................................CGCAACCTAAACCGGGAACTA............................................. 21 0 3 0.33 1 1 0 0
......................................................................................................................................AAAGAATCCACACTCCGACAACAA............................................................................................. 24 0 3 0.33 1 1 0 0
..........................................................................................................................................AATCCACACTCCGACAACAAG............................................................................................ 21 0 5 0.20 1 1 0 0
.......................................................................................................................................................ATACCAAGAAGTAAACAGC................................................................................. 19 2 8 0.13 1 0 1 0
...........................................................................................................................................................................................................................TGCATTTAGTTTCGACAAA............. 19 2 20 0.10 2 0 2 0
............................................................................................................................................................AAGAAGTATACAGCACATGA........................................................................... 20 3 14 0.07 1 0 1 0
.....................................................................................................................................................CAACAAGAAGAAGTAAACTGCT................................................................................ 22 3 19 0.05 1 1 0 0
........................................................................................TTTGAATGTGGAAAAGATCA............................................................................................................................................... 20 3 20 0.05 1 0 1 0

Anti-sense strand reads

GCCTTCGATAGGACAGACGATACGCCTTGGACGTCGTTTTTGTACTGTACCATCTTTGAATGATGCAATTTAAAGCTCGTGATGTGTCCAACATACACCTTTTTTAGTTACTTCCTGGAAATAGCCGACTTGATTTTCTTAGGTGTGAGGCTGTTGTTCTTCATTTGTCGAGTACGCTTAAATAAGCGTTGGATTTGGCCCTTGATTCCTATGTAGAGAACGTAAAGCAAGGCTGTTTGAATTTGCGGCGT
******************************************************************************************************........................((((((.............((.((......))))............))))))...**********************************************************************
Read size # Mismatch Hit Count Total Norm Total V118
embryo
M045
female body
V117
male body
V119
head
M020
head
........................................................................................................................................................................CGAGTACGCTTAAATAAGCGTTGGAT......................................................... 26 0 3 136.33 409 370 34 1 4 0
...........................................................................................................................................TAGGTGTGAGGCTGTTGTTCTTCAT....................................................................................... 25 0 2 108.50 217 209 8 0 0 0
........................................................................................................................................................................CGAGTACGCTTAAATAAGCGTTGGATTT....................................................... 28 0 2 100.00 200 197 3 0 0 0
.......................GCCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 25 0 1 81.00 81 47 34 0 0 0
.....................................................CTTTGAATGATGCAATTTAAAGCTCGT........................................................................................................................................................................... 27 0 1 78.00 78 46 32 0 0 0
......................CGCCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 26 0 1 44.00 44 25 19 0 0 0
.........AGGACAGACGATACGCCTTGGACGT......................................................................................................................................................................................................................... 25 0 2 41.50 83 54 29 0 0 0
....................................................................................................................................................................................................GGCCCTTGATTCCTATGTAGAGAACGT............................ 27 0 3 29.00 87 36 51 0 0 0
.....................ACGCCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 27 0 1 25.00 25 6 19 0 0 0
........................................................................................................................................................................CGAGTACGCTTAAATAAGCGTTGGATT........................................................ 27 0 2 22.50 45 42 3 0 0 0
....................................................................................................................................................GGCTGTTGTTCTTCATTTGTCGAGT.............................................................................. 25 0 2 19.00 38 34 4 0 0 0
........................................................................................................................................TCTTAGGTGTGAGGCTGTTGTTCTT.......................................................................................... 25 0 3 19.00 57 38 19 0 0 0
...........................................................................................................................................TAGGTGTGAGGCTGTTGTTCTTCATT...................................................................................... 26 0 2 16.50 33 32 1 0 0 0
.....................................................................TTAAAGCTCGTGATGTGTCCAACAT............................................................................................................................................................. 25 0 3 16.33 49 13 36 0 0 0
.............................................................................................................................................................................................TGGATTTGGCCCTTGATTCCTATGT..................................... 25 0 3 15.67 47 25 22 0 0 0
............................................................................................................TACTTCCTGGAAATAGCCGACTTGAT..................................................................................................................... 26 0 3 14.67 44 21 23 0 0 0
............................................................................................................................................AGGTGTGAGGCTGTTGTTCTTCAT....................................................................................... 24 0 2 14.00 28 23 5 0 0 0
.....................................TTTTGTACTGTACCATCTTTGAATGAT........................................................................................................................................................................................... 27 0 1 14.00 14 11 3 0 0 0
.............................................................................................................................................................TCTTCATTTGTCGAGTACGCTTAAAT.................................................................... 26 0 2 13.50 27 15 12 0 0 0
.............................................................................................................................................GGTGTGAGGCTGTTGTTCTTCATTTGT................................................................................... 27 0 2 13.50 27 12 15 0 0 0
.....................ACGCCTTGGACGTCGTTTTTGTACT............................................................................................................................................................................................................. 25 0 1 13.00 13 2 11 0 0 0
..................................................................................................................................................................................................................................GCAAGGCTGTTTGAATTTGCGGCGT 25 0 3 13.00 39 37 1 1 0 0
.............................................................GATGCAATTTAAAGCTCGTGATGTGT.................................................................................................................................................................... 26 0 3 13.00 39 35 4 0 0 0
.................CGATACGCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 26 0 1 13.00 13 0 13 0 0 0
..................GATACGCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 25 0 1 13.00 13 8 5 0 0 0
...........................................ACTGTACCATCTTTGAATGATGCAAT...................................................................................................................................................................................... 26 0 1 13.00 13 2 11 0 0 0
..CTTCGATAGGACAGACGATACGCCT................................................................................................................................................................................................................................ 25 0 2 12.50 25 22 3 0 0 0
............................GGACGTCGTTTTTGTACTGTACCATCT.................................................................................................................................................................................................... 27 0 1 11.00 11 4 7 0 0 0
............................GGACGTCGTTTTTGTACTGTACCAT...................................................................................................................................................................................................... 25 0 1 10.00 10 2 8 0 0 0
...................................................................................................................................................................................................TGGCCCTTGATTCCTATGTAGAGAACGT............................ 28 0 3 10.00 30 11 19 0 0 0
.......................................................................................CCAACATACACCTTTTTTAGTTACTT.......................................................................................................................................... 26 0 3 9.33 28 2 26 0 0 0
........................................................TGAATGATGCAATTTAAAGCTCGT........................................................................................................................................................................... 24 0 1 9.00 9 2 7 0 0 0
..................................................................................................................................................................................................TTGGCCCTTGATTCCTATGTAGAGAACGT............................ 29 0 3 8.00 24 0 24 0 0 0
......................................................TTTGAATGATGCAATTTAAAGCTCGT........................................................................................................................................................................... 26 0 1 8.00 8 6 2 0 0 0
........................................................TGAATGATGCAATTTAAAGCTCGTGAT........................................................................................................................................................................ 27 0 1 8.00 8 6 2 0 0 0
......................................................................................................................................TTTCTTAGGTGTGAGGCTGTTGTTCTT.......................................................................................... 27 0 3 8.00 24 11 13 0 0 0
...........................................................................................................................................................................................GTTGGATTTGGCCCTTGATTCCTATGT..................................... 27 0 3 7.67 23 17 6 0 0 0
..............................................................................................................................................GTGTGAGGCTGTTGTTCTTCATTTGT................................................................................... 26 0 2 7.50 15 10 5 0 0 0
...............................................................................................................................................TGTGAGGCTGTTGTTCTTCATTTGT................................................................................... 25 0 2 7.50 15 5 10 0 0 0
................................................................................................................................................GTGAGGCTGTTGTTCTTCATTTGT................................................................................... 24 0 2 7.50 15 4 11 0 0 0
..................................................................................................................................................GAGGCTGTTGTTCTTCATTTGTCGAGT.............................................................................. 27 0 2 7.50 15 6 9 0 0 0
.............................................................................................................................................GGTGTGAGGCTGTTGTTCTTCATT...................................................................................... 24 0 2 6.50 13 7 6 0 0 0
..........................................................................................................................................TTAGGTGTGAGGCTGTTGTTCTTCAT....................................................................................... 26 0 2 6.50 13 12 1 0 0 0
...................................................................................................................................................AGGCTGTTGTTCTTCATTTGTCGAGT.............................................................................. 26 0 2 6.50 13 10 3 0 0 0
.............................................................................................................ACTTCCTGGAAATAGCCGACTTGAT..................................................................................................................... 25 0 3 6.33 19 9 10 0 0 0
.......................................................TTGAATGATGCAATTTAAAGCTCGTGAT........................................................................................................................................................................ 28 0 1 6.00 6 4 2 0 0 0
............................................................................................................................................AGGTGTGAGGCTGTTGTTCTTCATT...................................................................................... 25 0 2 6.00 12 9 3 0 0 0
.....................ACGCCTTGGACGTCGTTTTTGTAC.............................................................................................................................................................................................................. 24 0 1 6.00 6 1 5 0 0 0
..............AGACGATACGCCTTGGACGTCGTTTT................................................................................................................................................................................................................... 26 0 1 6.00 6 3 3 0 0 0
........................CCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 24 0 1 6.00 6 1 5 0 0 0
GCCTTCGATAGGACAGACGATACGC.................................................................................................................................................................................................................................. 25 0 2 5.50 11 10 1 0 0 0
.............................................................................................................................................GGTGTGAGGCTGTTGTTCTTCAT....................................................................................... 23 0 2 5.50 11 6 5 0 0 0
...............................................................................................................TTCCTGGAAATAGCCGACTTGATTTTCT................................................................................................................ 28 0 3 5.33 16 2 14 0 0 0
...........................................ACTGTACCATCTTTGAATGATGCAATT..................................................................................................................................................................................... 27 0 1 5.00 5 1 4 0 0 0
.....................................TTTTGTACTGTACCATCTTTGAAT.............................................................................................................................................................................................. 24 0 1 5.00 5 4 1 0 0 0
...........................................ACTGTACCATCTTTGAATGATGCAATTT.................................................................................................................................................................................... 28 0 1 5.00 5 1 4 0 0 0
................................................................................................................................................................................................................................AAGCAAGGCTGTTTGAATTTGCGGCGT 27 0 3 5.00 15 12 3 0 0 0
..CTTCGATAGGACAGACGATACGCCTT............................................................................................................................................................................................................................... 26 0 2 5.00 10 9 1 0 0 0
.......................................................TTGAATGATGCAATTTAAAGCTCGT........................................................................................................................................................................... 25 0 1 5.00 5 1 4 0 0 0
..................................CGTTTTTGTACTGTACCATCTTTGAAT.............................................................................................................................................................................................. 27 0 1 5.00 5 3 2 0 0 0
.......................................................................................................................................................................................AAGCGTTGGATTTGGCCCTTGATTCCT......................................... 27 0 3 4.33 13 11 2 0 0 0
.........................................................................................................................................................................................................................GAACGTAAAGCAAGGCTGTTTGAATTT....... 27 0 3 4.33 13 10 3 0 0 0
.................................................................................................................................................TGAGGCTGTTGTTCTTCATTTGT................................................................................... 23 0 2 4.00 8 3 5 0 0 0
...............................................................................................................................................................................................................................AAAGCAAGGCTGTTTGAATTTGCGGCGT 28 0 3 4.00 12 2 10 0 0 0
..........................................................................................................................................................................................................TGATTCCTATGTAGAGAACGTAAAGC....................... 26 0 3 4.00 12 6 6 0 0 0
.......................GCCTTGGACGTCGTTTTTGTACT............................................................................................................................................................................................................. 23 0 1 4.00 4 3 1 0 0 0
...............................................................................................................................................................................GCTTAAATAAGCGTTGGATTTGG..................................................... 23 0 3 3.67 11 11 0 0 0 0
...............................................................................................................TTCCTGGAAATAGCCGACTTGATTT................................................................................................................... 25 0 3 3.67 11 4 7 0 0 0
.....................................................................................GTCCAACATACACCTTTTTTAGTTACTT.......................................................................................................................................... 28 0 3 3.67 11 1 8 0 0 2
.............................................................GATGCAATTTAAAGCTCGTGATGT...................................................................................................................................................................... 24 0 3 3.67 11 11 0 0 0 0
....................................................................................................................................................................TTGTCGAGTACGCTTAAATAAGCGT.............................................................. 25 0 3 3.33 10 9 1 0 0 0
...........................................................................................................................................................................................GTTGGATTTGGCCCTTGATTCCTAT....................................... 25 0 3 3.33 10 2 8 0 0 0
................................................................................GATGTGTCCAACATACACCTTTTTTAGT............................................................................................................................................... 28 0 3 3.33 10 1 9 0 0 0
.....................................................................................................................................................................................................GCCCTTGATTCCTATGTAGAGAACGT............................ 26 0 3 3.33 10 5 4 1 0 0
......................................................................................................................................TTTCTTAGGTGTGAGGCTGTTGTTCT........................................................................................... 26 0 3 3.33 10 2 7 1 0 0
........................................................................................................................................................................................................................AGAACGTAAAGCAAGGCTGTTTGAAT......... 26 0 3 3.33 10 7 3 0 0 0
.......................................................................................................................................TTCTTAGGTGTGAGGCTGTTGTTCTT.......................................................................................... 26 0 3 3.33 10 3 7 0 0 0
.......................................................................................................................................TTCTTAGGTGTGAGGCTGTTGTTCT........................................................................................... 25 0 3 3.33 10 4 5 1 0 0
........................................................................................................................................TCTTAGGTGTGAGGCTGTTGTTCT........................................................................................... 24 0 3 3.00 9 7 2 0 0 0
.....................................................................................GTCCAACATACACCTTTTTTAGTTAC............................................................................................................................................ 26 0 3 3.00 9 4 5 0 0 0
....................................TTTTTGTACTGTACCATCTTTGAAT.............................................................................................................................................................................................. 25 0 1 3.00 3 2 1 0 0 0
....TCGATAGGACAGACGATACGCCT................................................................................................................................................................................................................................ 23 0 2 3.00 6 3 3 0 0 0
.........AGGACAGACGATACGCCTTGGACG.......................................................................................................................................................................................................................... 24 0 2 3.00 6 0 6 0 0 0
.......................................................................................CCAACATACACCTTTTTTAGTTAC............................................................................................................................................ 24 0 3 3.00 9 2 7 0 0 0
.........................................................................................................................................CTTAGGTGTGAGGCTGTTGTTCTTCAT....................................................................................... 27 0 2 3.00 6 4 2 0 0 0
.................................................................................................................CCTGGAAATAGCCGACTTGATTTTCT................................................................................................................ 26 0 3 3.00 9 1 8 0 0 0
............................GGACGTCGTTTTTGTACTGTACCATCTT................................................................................................................................................................................................... 28 0 1 3.00 3 0 3 0 0 0
...............GACGATACGCCTTGGACGTCGTTTT................................................................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0
....................................................................................................................................................................................................................GTAGAGAACGTAAAGCAAGGCTGT............... 24 0 3 3.00 9 3 6 0 0 0
.....................................................CTTTGAATGATGCAATTTAAAGCTCG............................................................................................................................................................................ 26 0 1 3.00 3 0 3 0 0 0
......................................TTTGTACTGTACCATCTTTGAATGAT........................................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0
................................................................................................................................................................TCATTTGTCGAGTACGCTTAAAT.................................................................... 23 0 2 3.00 6 5 1 0 0 0
...........................TGGACGTCGTTTTTGTACTGTACCAT...................................................................................................................................................................................................... 26 0 1 3.00 3 1 2 0 0 0
.................TGATACGCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 26 1 1 3.00 3 2 1 0 0 0
............ACAGACGATACGCCTTGGACGTCGTTTT................................................................................................................................................................................................................... 28 0 1 3.00 3 0 3 0 0 0
.......................................................................................CCAACATACACCTTTTTTAGTTACT........................................................................................................................................... 25 0 3 2.67 8 0 8 0 0 0
.............................................................................................................ACTTCCTGGAAATAGCCGACTTGATT.................................................................................................................... 26 0 3 2.67 8 1 7 0 0 0
........................................................................................................................................................................................AGCGTTGGATTTGGCCCTTGATTCCTA........................................ 27 0 3 2.67 8 3 5 0 0 0
...........................................................ATGATGCAATTTAAAGCTCGTGATGT...................................................................................................................................................................... 26 0 3 2.67 8 8 0 0 0 0
.............................................................................................................................................................................................TGGATTTGGCCCTTGATTCCTAT....................................... 23 0 3 2.67 8 5 3 0 0 0
.........................................................................................................................................................................................................................GAACGTAAAGCAAGGCTGTTTGAAT......... 25 0 3 2.67 8 6 2 0 0 0
...........................................................................................................................................TAGGTGTGAGGCTGTTGTTCTTCATTT..................................................................................... 27 0 2 2.50 5 5 0 0 0 0
GCCTTCGATAGGACAGACGATACGCCT................................................................................................................................................................................................................................ 27 0 2 2.50 5 1 4 0 0 0
....TCGATAGGACAGACGATACGCCTT............................................................................................................................................................................................................................... 24 0 2 2.50 5 2 3 0 0 0
..............................................................................................................................................................................................................TCCTATGTAGAGAACGTAAAGCAAG.................... 25 0 2 2.50 5 4 1 0 0 0
..............................................................................................................CTTCCTGGAAATAGCCGACTTGAT..................................................................................................................... 24 0 3 2.33 7 3 4 0 0 0
...........................................................................................................TTACTTCCTGGAAATAGCCGACTTGAT..................................................................................................................... 27 0 3 2.33 7 0 7 0 0 0
................................................................................................................TCCTGGAAATAGCCGACTTGATTT................................................................................................................... 24 0 3 2.33 7 1 6 0 0 0
...............................................................................................................TTCCTGGAAATAGCCGACTTGATT.................................................................................................................... 24 0 3 2.33 7 1 6 0 0 0
................................................................................................................TCCTGGAAATAGCCGACTTGATTTTCT................................................................................................................ 27 0 3 2.33 7 1 6 0 0 0
.......................................................................................................................................................................................................CCTTGATTCCTATGTAGAGAACGT............................ 24 0 3 2.33 7 1 6 0 0 0
..........................................................................................................................................................................................CGTTGGATTTGGCCCTTGATTCCTAT....................................... 26 0 3 2.33 7 5 2 0 0 0
.................................................................................................................CCTGGAAATAGCCGACTTGATTTTCTT............................................................................................................... 27 0 3 2.33 7 0 7 0 0 0
.........................................................................................................................................................................................................................GAACGTAAAGCAAGGCTGTTTGAATT........ 26 0 3 2.33 7 6 1 0 0 0
..................................................................................................................................TGATTTTCTTAGGTGTGAGGCTGTTGT.............................................................................................. 27 0 3 2.00 6 5 1 0 0 0
....................................................................................................................................................................................................................GTAGAGAACGTAAAGCAAGGCTGTT.............. 25 0 3 2.00 6 2 4 0 0 0
....................TACGCCTTGGACGTCGTTTTTGTAC.............................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
...............................CGTCGTTTTTGTACTGTACCATCTTT.................................................................................................................................................................................................. 26 0 1 2.00 2 1 1 0 0 0
......................CGCCTTGGACGTCGTTTTTGTACT............................................................................................................................................................................................................. 24 0 1 2.00 2 0 2 0 0 0
....................AACGCCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 28 1 1 2.00 2 1 1 0 0 0
.....CGATAGGACAGACGATACGCCTTGGAC........................................................................................................................................................................................................................... 27 0 2 2.00 4 4 0 0 0 0
......GATAGGACAGACGATACGCCTTGGAC........................................................................................................................................................................................................................... 26 0 2 2.00 4 3 1 0 0 0
................................................................................................................TCCTGGAAATAGCCGACTTGATTTTCTT............................................................................................................... 28 0 3 2.00 6 1 5 0 0 0
..............................................................................................................................................................CTTCATTTGTCGAGTACGCTTAAAT.................................................................... 25 0 2 2.00 4 3 1 0 0 0
..........GGACAGACGATACGCCTTGGACGT......................................................................................................................................................................................................................... 24 0 2 2.00 4 2 2 0 0 0
......................CGCCTTGGACGTCGTTTTTGTACTG............................................................................................................................................................................................................ 25 0 1 2.00 2 0 2 0 0 0
.........................................................................................................................................CTTAGGTGTGAGGCTGTTGTTCTT.......................................................................................... 24 0 4 2.00 8 6 2 0 0 0
........................................................TGAATGATGCAATTTAAAGCTCGTGA......................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0
................................................................................................................TCCTGGAAATAGCCGACTTGATTTT.................................................................................................................. 25 0 3 2.00 6 2 4 0 0 0
.....................ACGCCTTGGACGTCGTTTTTGTACTG............................................................................................................................................................................................................ 26 0 1 2.00 2 0 2 0 0 0
.......................GCCTTGGACGTCGTTTTTGTACTGTA.......................................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0
..................GATACGCCTTGGACGTCGTTTTTGTAC.............................................................................................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0
................................................................................................................................................................TCATTTGTCGAGTACGCTTAAATAAGC................................................................ 27 0 2 2.00 4 2 1 1 0 0
..............................ACGTCGTTTTTGTACTGTACCAT...................................................................................................................................................................................................... 23 0 1 2.00 2 1 1 0 0 0
......................................................................................................................................................................................................................AGAGAACGTAAAGCAAGGCTGTTTGAAT......... 28 0 3 2.00 6 1 5 0 0 0
........................................................TGAATGATGCAATTTAAAGCTCG............................................................................................................................................................................ 23 0 1 2.00 2 0 2 0 0 0
...................ATACGCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0
.......................GCCTTGGACGTCGTTTTTGTACTG............................................................................................................................................................................................................ 24 0 1 2.00 2 0 2 0 0 0
................ACGATACGCCTTGGACGTCGTTTTT.................................................................................................................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0
.........................................GTACTGTACCATCTTTGAATGATGCAAT...................................................................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0
...............................................................................................................TTCCTGGAAATAGCCGACTTGATTTTCTT............................................................................................................... 29 0 3 2.00 6 0 6 0 0 0
.............................GACGTCGTTTTTGTACTGTACCAT...................................................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0
...................................GTTTTTGTACTGTACCATCTTTGAAT.............................................................................................................................................................................................. 26 0 1 2.00 2 0 2 0 0 0
....................TACGCCTTGGACGTCGTTTTTGTACT............................................................................................................................................................................................................. 26 0 1 2.00 2 1 1 0 0 0
..............AGACGATACGCCTTGGACGTCGTTTTT.................................................................................................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0
.....................................TTTTGTACTGTACCATCTTTGAATGA............................................................................................................................................................................................ 26 0 1 2.00 2 0 2 0 0 0
..........GGACAGACGATACGCCTTGGACGTCGT...................................................................................................................................................................................................................... 27 0 2 2.00 4 0 4 0 0 0
...........................................................................................................................................TAGGTGTGAGGCTGTTGTTCTTCA........................................................................................ 24 0 2 2.00 4 1 3 0 0 0
.......................................................................................................................................................................................................................GAGAACGTAAAGCAAGGCTGTTTGAAT......... 27 0 3 1.67 5 1 4 0 0 0
........................................................................................................................................................................CGAGTACGCTTAAATAAGCGTTGGA.......................................................... 25 0 3 1.67 5 3 2 0 0 0
................................................................................................................................CTTGATTTTCTTAGGTGTGAGGCTGT................................................................................................. 26 0 3 1.67 5 4 1 0 0 0
..........................................................................................................................................................................................................TGATTCCTATGTAGAGAACGTAAAG........................ 25 0 3 1.67 5 4 1 0 0 0
.......................................................................................................................................................................................AAGCGTTGGATTTGGCCCTTGATTCC.......................................... 26 0 3 1.67 5 3 2 0 0 0
.....................................................................................................................................................................TGTCGAGTACGCTTAAATAAGCGT.............................................................. 24 0 3 1.67 5 4 1 0 0 0
...........................................................................................................................................................................................................................ACGTAAAGCAAGGCTGTTTGAATT........ 24 0 3 1.67 5 3 2 0 0 0
............................................................................................................................................................................................TTGGATTTGGCCCTTGATTCCTATGT..................................... 26 0 3 1.67 5 4 1 0 0 0
.................................................................................................................................TTGATTTTCTTAGGTGTGAGGCTGT................................................................................................. 25 0 3 1.67 5 4 1 0 0 0
....................................................................................................................GGAAATAGCCGACTTGATTTTCTTAGGT........................................................................................................... 28 0 3 1.67 5 0 5 0 0 0
.........AGGACAGACGATACGCCTTGGACGTCGT...................................................................................................................................................................................................................... 28 0 2 1.50 3 0 3 0 0 0
........TAGGACAGACGATACGCCTTGGACGT......................................................................................................................................................................................................................... 26 0 2 1.50 3 1 2 0 0 0
.....................................................................................................................................................GCTGTTGTTCTTCATTTGTCGAGT.............................................................................. 24 0 2 1.50 3 2 1 0 0 0
..........................................................................................................................................................TGTTCTTCATTTGTCGAGTACGCT......................................................................... 24 0 2 1.50 3 2 1 0 0 0
...............................................................................................................................................................................................................CCTATGTAGAGAACGTAAAGCAAGGCT................. 27 0 2 1.50 3 1 2 0 0 0
..........................................................................................................................................TTAGGTGTGAGGCTGTTGTTCTT.......................................................................................... 23 0 5 1.40 7 3 4 0 0 0
............................................................................................................TACTTCCTGGAAATAGCCGACTTGATT.................................................................................................................... 27 0 3 1.33 4 1 3 0 0 0
.............................................................................CGTGATGTGTCCAACATACACCTTTT.................................................................................................................................................... 26 0 3 1.33 4 3 1 0 0 0
........................................................................................................................................................................................................CTTGATTCCTATGTAGAGAACGT............................ 23 0 3 1.33 4 0 4 0 0 0
.............................................................................................................................................................................................................................GTAAAGCAAGGCTGTTTGAATTTGC..... 25 0 3 1.33 4 4 0 0 0 0
..............................................................................................................................................................................................GGATTTGGCCCTTGATTCCTATGT..................................... 24 0 3 1.33 4 1 3 0 0 0
.....................................................................................................................................TTTTCTTAGGTGTGAGGCTGTTGTTCT........................................................................................... 27 0 3 1.33 4 4 0 0 0 0
................................................................................GATGTGTCCAACATACACCTTTTTTAGTT.............................................................................................................................................. 29 0 3 1.33 4 0 4 0 0 0
.............................................................................CGTGATGTGTCCAACATACACCTTT..................................................................................................................................................... 25 0 3 1.33 4 2 2 0 0 0
......................................................................................................................................TTTCTTAGGTGTGAGGCTGTTGT.............................................................................................. 23 0 3 1.33 4 3 1 0 0 0
..................................................................................................................................TGATTTTCTTAGGTGTGAGGCTGT................................................................................................. 24 0 3 1.33 4 3 1 0 0 0
...............................................................................................................TTCCTGGAAATAGCCGACTTGATTTT.................................................................................................................. 26 0 3 1.33 4 1 3 0 0 0
................................................................................GATGTGTCCAACATACACCTTTTT................................................................................................................................................... 24 0 3 1.33 4 2 2 0 0 0
..........................................................................................................................AGCCGACTTGATTTTCTTAGGTGT......................................................................................................... 24 0 3 1.33 4 3 1 0 0 0
.................................................................................................................................................................................................................................AGCAAGGCTGTTTGAATTTGCGGCGT 26 0 3 1.33 4 2 1 0 0 1
............................................................................TCGTGATGTGTCCAACATACACCTTTT.................................................................................................................................................... 27 0 3 1.00 3 0 3 0 0 0
.......................GCCTTGGACGTCGTTTTTGTAATGT........................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................TTTGTCGAGTACGCTTAAATAAGCGT.............................................................. 26 0 3 1.00 3 3 0 0 0 0
...........................................................................................................................................................................................................................ACGTAAAGCAAGGCTGTTTGAAT......... 23 0 3 1.00 3 2 1 0 0 0
.............................................................................................................................................GGTGTGAGGCTGTTGTTCTTCATTTGTC.................................................................................. 28 0 2 1.00 2 0 2 0 0 0
........AAGGACAGACGATACGCCTTGGACGT......................................................................................................................................................................................................................... 26 1 2 1.00 2 1 1 0 0 0
.......................................................TTGAATGATGCAATTTAAAGCTCGTGA......................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.....CGATAGGACAGACGATACGC.................................................................................................................................................................................................................................. 20 0 2 1.00 2 2 0 0 0 0
..............AGACGATACGCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0
.......................GCCTTGCACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...............GACGATACGCCTTGGACGTCGTTTTT.................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
......................CGCCTTGGACGTCGTTTT................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
.........................CTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...................ATACGCCTTGGACGTCGTTTT................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.....................................................CTTTGAATGATGCAATTTAAAGCTC............................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.....................ACGCCTTGGACGTCGTTTTT.................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
.....................ACGCCTTGGACGTCGTTTTTG................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.......................GCCTTGGACGTCCTTTTTGTACTTT........................................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0
.....................................................CTTTGAATGATGCAGTTTAAAGCTCGT........................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
............ACAGACGATACGCCTTGGACGTCGTTT.................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
........................................TGTACTGTACCATCTTTGAATGGTGCAAT...................................................................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0
..............................................................ATGCAATTTAAAGCTCGTGATGTGT.................................................................................................................................................................... 25 0 3 1.00 3 3 0 0 0 0
..................................................CATCTTTGAATGATGCAATTTAAAGCT.............................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
.....................TTGCCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0
.............................GACGTCGTTTTTGTACTGTACCATCTT................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................TAGGCTGTTGTTCTTCATTTGTCGAGT.............................................................................. 27 1 2 1.00 2 0 2 0 0 0
....................................................................................................................GGAAATAGCCGACTTGATTTTCTT............................................................................................................... 24 0 3 1.00 3 0 3 0 0 0
.............................GACGTCGTTTTTGTACTGTACCATCTTT.................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
...................................GTTTTTGTACTGTACCATCT.................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................GGCTGTTGTTCTTCATTTGTCGAGTA............................................................................. 26 0 2 1.00 2 0 2 0 0 0
.................CGATACGCCTTGGACGTCGTTGTTGT................................................................................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0
.......................GCCTTGGACGTCGTTTTTGTACTGTAC......................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.......................GCCTTGGACGTCTTTTTTGTACTGT........................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.......................................................................................................TTAGTTACTTCCTGGAAATAGCCGACT......................................................................................................................... 27 0 3 1.00 3 0 3 0 0 0
.....................................................CTTTGAATGATGCAAGTTAAAGCTCGT........................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
...................................GCTTTTGTACTGTACCATCTTTGAAT.............................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
.....................ACGCCTTGGACGTCGTTTTTGCACT............................................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................CCCTTGATTCCTATGTAGAGAACGT............................ 25 0 3 1.00 3 0 3 0 0 0
.....................................................................................GTCCAACATACACCTTTTTTAGT............................................................................................................................................... 23 0 3 1.00 3 0 3 0 0 0
..................AATACGCCTTGGACGTCGTTTTTGTAC.............................................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................GAGGCTGTTGTTCTTCATTTGTCGAG............................................................................... 26 0 2 1.00 2 0 2 0 0 0
............................GGACGTCGCTTTTGTACTGTACCAT...................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
......................................................TTTGAATGATTCAATTTAAAGCTCGT........................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
....................TACGCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
..............................ACGTCGTTTTTGTACTGTACCATCTT................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
............................GGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...TTCGATAGGACAGACGATACGCCT................................................................................................................................................................................................................................ 24 0 2 1.00 2 1 1 0 0 0
....................................................CTTTTGAATGATGCAATTTAAAGCTCGT........................................................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0
.................................................................................................................CCTGGAAATAGCCGACTTGATTTT.................................................................................................................. 24 0 3 1.00 3 0 3 0 0 0
....................................................................................................................................................................................................................GTAGAGAACGTAAAGCAAGGCTGTTT............. 26 0 3 1.00 3 3 0 0 0 0
............................GGGCGTCGTTTTTGTACTGTACCAT...................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
....................TACGCCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
...........................TGGACGTCGTTTTTGTACTGTACCATCT.................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
.......................GCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
.............AAGACGATACGCCTTGGACGTCGTTTTT.................................................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0
..........................................................................GCTCGTGATGTGTCCAACATACACCT....................................................................................................................................................... 26 0 3 1.00 3 0 3 0 0 0
.............................................................................................................................................................................................TGGATTTGGCCCTTGATTCCTATGTAG................................... 27 0 3 1.00 3 2 1 0 0 0
..........................................................................................................................................ATAGGTGTGAGGCTGTTGTTCTTCAT....................................................................................... 26 1 2 1.00 2 2 0 0 0 0
.CCTTCGATAGGACAGACGATACGC.................................................................................................................................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
........................................................................................................................................................GTTGTTCTTCATTTGTCGAGTACGC.......................................................................... 25 0 2 1.00 2 2 0 0 0 0
..................................................................................................................................................................................................TTGGCCCTTGATTCCTATGTAGAG................................. 24 0 3 1.00 3 1 2 0 0 0
........................CCTTGGACGTCGTTTTTG................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0
........................................................TGAATGATGCAATTTAAAGCTCTTGAT........................................................................................................................................................................ 27 1 1 1.00 1 1 0 0 0 0
............ACAGACGATACGCCTTGGACGTCGTT..................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
.............................GACGTCGTTTTTGTACTGTACCATCT.................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
....................TACGCCTTGGACGTCGTTTTTGTAAT............................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
.........................................................................AGCTCGTGATGTGTCCAACATACACCTT...................................................................................................................................................... 28 0 3 1.00 3 0 3 0 0 0
....................................TTTTTGTACTGTACCATCTTTGAAC.............................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0
....TCGATAGGACAGACGATACGCCTTGGAC........................................................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
............TCAGACGATACGCCTTGGACGTCGTTTT................................................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0
.......................GCCTTGGAGGTCGTTTTTGTACTGTC.......................................................................................................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0
...............................CGTCGTTTTTGTACTGTACCATCTT................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.................................................CCATCTTTGAATGATGCAATTTAAAGC............................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................TCATTTGTCGAGTACGCTTAAATAAGCGT.............................................................. 29 0 2 1.00 2 1 1 0 0 0
.....................................................CTTTGAATGATGCAATTTAA.................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
............ACAGACGATACGCCTTGGACGTCGTTTTT.................................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................GTTGTTCTTCATTTGTCGAGTACGCTT........................................................................ 27 0 2 1.00 2 2 0 0 0 0
..............................ACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
...............................CGTCGTTTTTGTACTGTACCAT...................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...........................................ACTGTCCCATCTTTGAATGATGCAATTT.................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
........................................TGTACTGTACCATCTTTGAATGATGCAAT...................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................................TTGATTCCTATGTAGAGAACGT............................ 22 0 3 1.00 3 2 1 0 0 0
............................GGACGTCGTTTTTGTACTGTACCA....................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
............................GGACGTCGTTTTTGTACTGTACCATC..................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................CTAGTACGCTTAAATAAGCGTTGGATTT....................................................... 28 1 2 1.00 2 2 0 0 0 0
..........GGACAGACGATACGCCTTGGACGTCGTT..................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
............................................CTGTACCATCTTTGAATGATGCAATT..................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.......................................TTGTACTGTACCATCTTTGAATGAT........................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
......................CGCATTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.....................................................CTTTGAATGATGCAATTTAAAGATCG............................................................................................................................................................................ 26 1 1 1.00 1 0 1 0 0 0
......................TGCCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...............................CGTCGTTTTTGTACTGTACCATCT.................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.....................ACGCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................ATTGTGAGGCTGTTGTTCTTCATTTGT................................................................................... 27 2 2 1.00 2 1 1 0 0 0
................................GTCGTTTTTGTACTGTACCATCTTT.................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
...................ATACGCCTTGGACGTCGTTTTTGTACTGT........................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0
.........................................................GAATGATGCAATTTAAAGCTCGTGAT........................................................................................................................................................................ 26 0 3 1.00 3 3 0 0 0 0
..............................AAGTGGTTTTTGTACTGTACAA....................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0
.................................................................................................................................TTGATTTTCTTAGGTGTGAGGCTGTT................................................................................................ 26 0 3 1.00 3 2 1 0 0 0
.............................................................................................................................CGACTTGATTTTCTTAGGTGTGAGGCT................................................................................................... 27 0 3 1.00 3 3 0 0 0 0
........................................................................................................................................TCTTAGGTGTGAGGCTGTTGTTCTTC......................................................................................... 26 0 2 1.00 2 2 0 0 0 0
..CTTCGATAGGACAGACGATACGC.................................................................................................................................................................................................................................. 23 0 2 1.00 2 2 0 0 0 0
..................GATACGCCTTGGACGTCGTTTT................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...............GACGATACGCCTTGGACGTCGTTTTTGT................................................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................TAGGTGTGAGGCTGTTGTTCTTCAC....................................................................................... 25 1 2 1.00 2 2 0 0 0 0
.......................GCCTTGGACGTCGTTTTTGTA............................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................GCTTAAATAAGCGTTGGATTT....................................................... 21 0 7 0.71 5 5 0 0 0 0
..................................................................................................................................TGATTTTCTTAGGTGTGAGGCTGTT................................................................................................ 25 0 3 0.67 2 1 1 0 0 0
..........................................................................GCTCGTGATGTGTCCAACATACACCTT...................................................................................................................................................... 27 0 3 0.67 2 1 1 0 0 0
......................................................................................................................................TTTCTTAGGTGTGAGGCTGTTGTTC............................................................................................ 25 0 3 0.67 2 0 2 0 0 0
...............................................................................................................................................................................................GATTTGGCCCTTGATTCCTATGTAGA.................................. 26 0 3 0.67 2 1 1 0 0 0
.......................................................................................CCAACATACACCTTTTTTAGTTACTTCCT....................................................................................................................................... 29 0 3 0.67 2 0 2 0 0 0
............................................................................................................TACTTCCTGGAAATAGCCGACTTGA...................................................................................................................... 25 0 3 0.67 2 0 2 0 0 0
........................................................................................................................................................................CGAGTACGCTTAAATAAGCGTCGGAT......................................................... 26 1 3 0.67 2 2 0 0 0 0
...........................................................................CTCGTGATGTGTCCAACATACACCTT...................................................................................................................................................... 26 0 3 0.67 2 0 2 0 0 0
...........................................................................................................................................................................................................................ACGTAAAGCAAGGCTGTTTGAATTT....... 25 0 3 0.67 2 2 0 0 0 0
...................................................................................GTGTCCAACATACACCTTTTTTAGTTAC............................................................................................................................................ 28 0 3 0.67 2 0 2 0 0 0
..............................................................................................................CTTCCTGGAAATAGCCGACTTGATTT................................................................................................................... 26 0 3 0.67 2 2 0 0 0 0
......................................................................................................................................................................................................................AGAGAACGTAAAGCAAGGCTGTTTGAA.......... 27 0 3 0.67 2 2 0 0 0 0
............................................................................................................................................................................................ATGGATTTGGCCCTTGATTCCTATGT..................................... 26 1 3 0.67 2 2 0 0 0 0
...........................................................................................................................................TAGGTGTGAGGTTGTTGTTCTTCAT....................................................................................... 25 1 3 0.67 2 2 0 0 0 0
........................................................................................................................................................................................................................AGAACGTAAAGCAAGGCTGTTTGAATT........ 27 0 3 0.67 2 1 1 0 0 0
..................................................................................................................................................................................................TTGGCCCTTGATTCCTATGTAGAGAAC.............................. 27 0 3 0.67 2 2 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004887:355486-355736 + dwi_2368 CGGAAGCTATCCTGTCTGCTATGCGGAACCTGCAGCAAAAACATGACATGGTAGAAACTTACTACGTTAAATTTCGAGCACTACACAGGTTGTATGTGGAAAAAATCAATGAAGGACCTTTATCGGCTGAACTAAAAGAATCCACACTCCGACAACAAGAAGTAAACAGCTCATGCGAATTTATTCGCAACCTAAACCGGGAACTAAGGATACATCTCTTGCATTTCGTTCCGACAAACTTAAACGCCGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CGGAAGCTATCCTGTCTGCTATGCGGAACCTGCAGCAAAAACATGACATGGTAGAAACTTACTACGTTAAATTTCGAGCACTACACAGGTTGTATGTGGAAAAAATCAATGAAGGACCTTTATCGGCTGAACTAAAAGAATCCACACTCCGACAACAAGAAGTAAACAGCTCATGCGAATTTATTCGCAACCTAAACCGGGAACTAAGGATACATCTCTTGCATTTCGTTCCGACAAACTTAAACGCCGCASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
......................................................................ATTTCGAGCACTACACAGGTTGT..............................................................................................................................................................2333.00909000
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGACA...............2332.67808000
......................................AAACATGACATGGTAGAAACTTA..............................................................................................................................................................................................2312.00202000
......................................AAACATGACATGGTAGAAACTTAC.............................................................................................................................................................................................2412.00202000
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGACAAACT...........2732.00606000
............................................................................................................................GGCTGAACTAAAAGAATCCACACTC......................................................................................................2531.67505000
......................................................................ATTTCGAGCACTACACAGGTTGTATG...........................................................................................................................................................2631.33402020
......................................................................ATTTCGAGCACTACACAGGTTG...............................................................................................................................................................2231.33402020
...........................................................TACTACGTTAAATTTCGAGCACTA........................................................................................................................................................................2431.00303000
.................................AGCAAAAACATGACATGGTAGAAA..................................................................................................................................................................................................2411.00101000
...........................................TGACATGGTAGAAACTTACTACG.........................................................................................................................................................................................2311.00101000
...........................................TGACATGGTAGAAACTTACTACGT........................................................................................................................................................................................2411.00101000
.......................................AACATGACATGGTAGAAACTTACTACGT........................................................................................................................................................................................2811.00100010
...............................GCAGCAAAAACATGACATGGT.......................................................................................................................................................................................................2111.00101000
............................CCTGCAGCAAAAACATGACATGGTA......................................................................................................................................................................................................2511.00100010
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGAC................2231.00303000
..................................................................................................................................................................TAAACAGCTCATGCGAATTTATTCG................................................................2531.00300030
......................GCGGAACCTGCAGCAAAAACATGA.............................................................................................................................................................................................................2411.00101000
..............................................................................................................................................................GAAGTAAACAGCTCATGCGAATT......................................................................2321.00201010
......................................................................................................................................................................................................................TCTCTTGCATTTCGTTCCGACA...............2231.00303000
.......................................................................................................AATCAATGAAGGACCTTTATCGG.............................................................................................................................2330.67201010
...................................................................................................................................................................AAACAGCTCATGCGAATTTATTCG................................................................2430.67201010
.......................................................................TTTCGAGCACTACACAGGTTGT..............................................................................................................................................................2230.67202000
..................................................................................................................................ACTAAAAGAATCCACACTCCGA...................................................................................................2230.67202000
........................................................................................................................................................................................TCGCAACCTAAACCGGGAACTAAGGA.........................................2630.67202000
....................................................................................................................................TAAAAGAATCCACACTCCGACAACAA.............................................................................................2630.67200020
............................................................................................................................................................AAGAAGTAAACAGCTCATGCGAAT.......................................................................2420.50101000
.......TATCCTGTCTGCTATGCGGAACCTGCAG........................................................................................................................................................................................................................2820.50101000
..GAAGCTATCCTGTCTGCTATGCGGA................................................................................................................................................................................................................................2520.50100010
......................................................................................................................................................GACAACAAGAAGTAAACAGCTCATGC...........................................................................2620.50101000
..............................................................................................................................................................GAAGTAAACAGCTCATGCGAATTT.....................................................................2420.50101000
........ATCCTGTCTGCTATGCGGAACCTGC..........................................................................................................................................................................................................................2520.50101000
.....GCTATCCTGTCTGCTATGCGGAACCT............................................................................................................................................................................................................................2620.50100100
..........................................................................................................................................................ACAAGAAGTAAACAGCTCATGCGAATA......................................................................2720.50101000
.......................................................................................................................................................ACAACAAGAAGTAAACAGCTCATG............................................................................2420.50101000
..........................................................................................................................................................ACAAGAAGTAAACAGCTCATGCG..........................................................................2320.50101000
............TGTCTGCTATGCGGAACCTGC..........................................................................................................................................................................................................................2120.50101000
................................................................................................................................................CACTCCGACAACAAGAAGTAAAC....................................................................................2320.50101000
...........CTGTCTGCTATGCGGAACCTGCAGCA......................................................................................................................................................................................................................2620.50101000
...........................................................................................................................................................CAAGAAGTAAACAGCTCATGCGAATT......................................................................2620.50100010
............................................................................................................................GGCTGAACTAAAAGAATCCACACT.......................................................................................................2430.33101000
..........................................................................................................................................................................................GCAACCTAAACCGGGAACTAAGGATACA.....................................2830.33101000
..............................................................................................TGTGGAAAAAATCAATGAAGGAC......................................................................................................................................2330.33101000
..............................................................................................................................CTGAACTAAAAGAATCCACACTCCGAC..................................................................................................2730.33101000
...............................................................................................................................TGAACTAAAAGAATCCACACTCCGAC..................................................................................................2630.33101000
..................................................................................................................................................................................................................................CGTTCCGACAAACTTAAACGCCGCA2530.33101000
...................................................................................................AAAAAATCAATGAAGGACCTTTAT................................................................................................................................2430.33101000
........................................................................TTCGAGCACTACACAGGTTGTATG...........................................................................................................................................................2430.33100010
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGACAA..............2430.33101000
..........................................................................................................................................................................................................................TTGCATTTCGTTCCGACAAACTT..........2330.33101000
.........................................................................TCGAGCACTACACAGGTTGTA.............................................................................................................................................................2130.33101000
...............................................................................................................................TGAACTAAAAGAATCCACACTC......................................................................................................2230.33101000
......................................................................................................................................AAAGAATCCACACTCCGACAACA..............................................................................................2330.33101000
.........................................................................................................................................................................................CGCAACCTAAACCGGGAACTAAGGA.........................................2530.33101000
............................................................................................................................................................................................AACCTAAACCGGGAACTAAGGAT........................................2330.33101000
............................................................................................................................................................................................................................GCATTTCGTTCCGACAAACT...........2030.33101000
......................................................................................................................................................................................................................TCTCTTGCATTTCGTTCCGACAAACT...........2630.33100010
..................................................................................................................................................................................................................................CGTTCCGACAAACTTAAACGCCG..2330.33101000
...................................................................................................AAAAAATCAATGAAGGACCTTT..................................................................................................................................2230.33101000
..................................................................................................................................................................TAAACAGCTCATGCGAATTTATTCGCAACC...........................................................3030.33100010
.....................................................................................................AAAATCAATGAAGGACCTTTATC...............................................................................................................................2330.33100010
................................................................................................TGGAAAAAATCAATGAAGGACCTTTA.................................................................................................................................2630.33101000
...................................................................TAAATTTCGAGCACTACACAGGTTG...............................................................................................................................................................2530.33100010
.........................................................................................................................ATCGGCTGAACTAAAAGAATCCACA.........................................................................................................2530.33101000
......................................................................ATTTCGAGCACTACACAGGTT................................................................................................................................................................2130.33101000
........................................................................TTCGAGCACTACACAGGTTGTATGTG.........................................................................................................................................................2630.33100010
.........................................................................................................................................................................................................................CTTGCATTTCGTTCCGACAAACT...........2330.33101000
....................................................................................ACAGGTTGTATGTGGAAAAAATCA...............................................................................................................................................2430.33101000
.......................................................................................................AATCAATGAAGGACCTTTATCGGCTG..........................................................................................................................2630.33101000
........................................................................................................................................................................................TCGCAACCTAAACCGGGAACTA.............................................2230.33101000
......................................................................ATTTCGAGCACTACACAGGTTGTA.............................................................................................................................................................2430.33100010
...........................................................TACTACGTTAAATTTCGAGCACTACA......................................................................................................................................................................2630.33101000
....................................................................................................AAAAATCAATGAAGGACCTTTAT................................................................................................................................2330.33101000
...........................................................TACTACGTTAAATTTCGAGCACTACACA....................................................................................................................................................................2830.33101000
................................................................................................................................................................................................TAAACCGGGAACTAAGGATACATCTCT................................2730.33101000
.......................................................................................................AATCAATGAAGGACCTTTATC...............................................................................................................................2130.33101000
...................................................................................................................................................................................................................ACATCTCTTGCATTTCGTTCC...................2130.33101000
..................................................................................................................................ACTAAAAGAATCCACACTCCGACA.................................................................................................2430.33101000
..........................................................................................................................................................................................GCAACCTAAACCGGGAACTAAGGATA.......................................2630.33101000
..............................................................................................................................CTGAACTAAAAGAATCCACACTC......................................................................................................2330.33101000
.....................................................................................................................................................................................TATTCGCAACCTAAACCGGGAACTA.............................................2530.33100010
.............................................................................................................................GCTGAACTAAAAGAATCCACACTCCG....................................................................................................2630.33101000
............................................................................................................................................................................................................TAAGGATACATCTCTTGCATT..........................2130.33100010
....................................................................................ACAGGTTGTATGTGGAAAAAATCAA..............................................................................................................................................2530.33100010
............................................................ACTACGTTAAATTTCGAGCACTACACA....................................................................................................................................................................2730.33101000
.....................................................................................................AAAATCAATGAAGGACCTTTATCGGC............................................................................................................................2630.33100010
..........................................................................................TGTATGTGGAAAAAATCAATGAAGGA.......................................................................................................................................2630.33100010
............................................................................................................................GGCTGAACTAAAAGAATCCACA.........................................................................................................2230.33101000
.....................................................................................................................................................................................................................ATCTCTTGCATTTCGTTCCGACAAACTG..........2830.33101000
.................................................................................................................................AACTAAAAGAATCCACACTCCGACA.................................................................................................2530.33101000
..............................................................................................................................CTGAACTAAAAGAATCCACACTCCGA...................................................................................................2630.33101000
.........................................................................................................................ATCGGCTGAACTAAAAGAATCCA...........................................................................................................2330.33101000
..................................................................TTAAATTTCGAGCACTACACAGGTTG...............................................................................................................................................................2630.33100010
............................................................................................................................GGCTGAACTAAAAGAATCCACACTCC.....................................................................................................2630.33101000
.........................................................................................................................................................................................CGCAACCTAAACCGGGAACTA.............................................2130.33101000
......................................................................................................................................AAAGAATCCACACTCCGACAACAA.............................................................................................2430.33101000
..........................................................................................................................................AATCCACACTCCGACAACAAG............................................................................................2150.20101000

Generated: 05/18/2015 at 04:12 AM