ID:

dwi_2364

 Coordinate:

scf2_1100000004887:305682-305832 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.9 -18.8 -18.8 -18.5

Flybase annnotation

exon [dwil_GLEANR_16445:3]; CDS [Dwil\GK16078-cds]; intron [Dwil\GK16078-in]; Antisense to intron [Dwil\GK16085-in]

No Repeatable elements found

mature
  1. scf2_1100000005823:1525-1549 +
  2. scf2_1100000004551:13915-13939 -
  3. dwi_2364  scf2_1100000004887:305732-305756 -
  4. scf2_1100000007223:574-598 +
star
  1. scf2_1100000006572:24-49 -
  2. dwi_2364  scf2_1100000004887:305791-305816 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAGCAGGCAGCTAATTTACTTGGCGTTCCTGCTCGTCCCAGTGTATCTCGTCCTGCTGTAGCTCGTCCAGTTTGTGCAGCTCGTCTTAACGTGGCTCGACCTGGTGTAGGACGTCCAGTTGTAATTGATAATGCAAAGGGTAAGTTTACTTAAATTATGAAAGATTGTGGAATAGATAATGTAAATAACCTGAATTACAGGCCAGAAGGCAGTAGCTAAGCCAGCAACTGCTAATAAAACCAACACCCCC
******************************************************************...((....((((((((((((((((..((.....))..)).)))))))...))))))).........................))**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body		 V119
head
..............................................................................................................................TGATAATGCAAAGGGTAAGTTTACT.................................................................................................... 25 0 4 3.25 13 1 12 0 0 0
..................................................................TCCAGTTTGTGCAGCTCGTCTTAACG............................................................................................................................................................... 26 0 2 1.50 3 0 3 0 0 0
.....................................................................................................................................................................................................ACAGGCCAGAAGGCAGTAGCTAAGA............................. 25 1 1 1.00 1 1 0 0 0 0
..................................................................TCCAGTTGGTGCAGCTCGTCTTAACG............................................................................................................................................................... 26 1 2 1.00 2 1 1 0 0 0
...............................................................................GCTCGTCTTAACGTGGCTCGACCTGG.................................................................................................................................................. 26 0 2 1.00 2 2 0 0 0 0
...................................................................................................................................................................................................................................ACTGCTAATAAAACCAACACCC.. 22 0 2 1.00 2 2 0 0 0 0
.................................................................................TCGTCTTAACGTGGCTCGACCTGGTG................................................................................................................................................ 26 0 2 1.00 2 0 2 0 0 0
..................................................................................................................................................................AGATTGTGGAATAGATAATGTA................................................................... 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................AGATTGTGGAATAGATAATGTAAATAAC............................................................. 28 0 1 1.00 1 0 1 0 0 0
............................................................................................................................ATTGATAATGCAAAGGGTAAG.......................................................................................................... 21 0 4 0.75 3 0 3 0 0 0
...............................................................................................................................................AGTTTACTTAAATTATGAAAGAT..................................................................................... 23 0 3 0.67 2 2 0 0 0 0
.........................................................................................................................................................AATTATGAAAGATTGTGGAAT............................................................................. 21 0 3 0.67 2 2 0 0 0 0
.....................................................................................................................................................................................................................................TGCTAATAAAACCAACACCCC. 21 0 2 0.50 1 1 0 0 0 0
..................................................................................CGTCTTAACGTGGCTCGACCTGGT................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
...................................................................CCAGTTGGTGCAGCTCGTCTTAACGTG............................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
................................................................CGTCCAGTTTGTGCAGCTCGTC..................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
................................................................CGTCCAGTTGGTGCAGCTCGTCTT................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
............................................................................................TGGCTCGACCTGGTGTAGGACGTC....................................................................................................................................... 24 0 4 0.50 2 1 1 0 0 0
.........................................................TGTAGCTCGTCCAGTTTGTGC............................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................GTAATTGATAATGCAAAGGGTA............................................................................................................ 22 0 4 0.50 2 1 1 0 0 0
...............................................................................................................................GATAATGCAAAGGGTAAGTTTACT.................................................................................................... 24 0 4 0.50 2 1 1 0 0 0
.........................................................................................................TGTAGGACGTCCAGTTGTAATTGATAA....................................................................................................................... 27 0 4 0.50 2 1 1 0 0 0
................................................................CGTCCAGTTGGTGCAGCTCGTCT.................................................................................................................................................................... 23 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................TGATAATGCAAAGGGTAAGTTTACTTA.................................................................................................. 27 0 4 0.50 2 0 2 0 0 0
..............................................................................................................................TGATAATGCAAAGGGTAAGTTTAC..................................................................................................... 24 0 4 0.50 2 0 2 0 0 0
...........................TCCTGCTCGTCCCAGTGTATCTCGTCC..................................................................................................................................................................................................... 27 0 5 0.40 2 2 0 0 0 0
..............................................TCTCGTCCTGCTGTAGCTCGTCCAG.................................................................................................................................................................................... 25 0 5 0.40 2 0 2 0 0 0
.......................................CAGTGTATCTCGTCCTGCTGTAGCT........................................................................................................................................................................................... 25 0 5 0.40 2 2 0 0 0 0
....................................TCCCAGTGTATCTCGTCCTGCTG................................................................................................................................................................................................ 23 0 5 0.40 2 2 0 0 0 0
....................................TCCCAGTGTATCTCGTCCTGCT................................................................................................................................................................................................. 22 0 5 0.40 2 2 0 0 0 0
....................................TCCCAGTGTATCTCGTCCTGCTGTAGC............................................................................................................................................................................................ 27 0 5 0.40 2 2 0 0 0 0
....................................TCCCAGTGTATCTCGTCCTGCTGT............................................................................................................................................................................................... 24 0 5 0.40 2 2 0 0 0 0
............................................................................................................................................................TATGAAAGATTGTGGAATAGAT......................................................................... 22 0 3 0.33 1 0 0 0 1 0
.........................................................................................................................................................AATTATGAAAGATTGTGGAATAGA.......................................................................... 24 0 3 0.33 1 1 0 0 0 0
...............................................................................................................................................AGTTTACTTAAATTATGAAAGATTGTG................................................................................. 27 0 3 0.33 1 0 1 0 0 0
......................................................................................................................................................TTAAATTATGAAAGATTGTGG................................................................................ 21 0 3 0.33 1 0 1 0 0 0
......................................................TGCTGTAGCTCGTCCAGTTGGTGCAG........................................................................................................................................................................... 26 1 3 0.33 1 0 1 0 0 0
..................................................GTCCTGCTGTAGCTCGTCCAG.................................................................................................................................................................................... 21 0 6 0.33 2 1 1 0 0 0
............................................................................................................AGGACGTCCAGTTGTAATTGATA........................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0
...........................................................................................................................AATTGATAATGCAAAGGGTAAGTT........................................................................................................ 24 0 4 0.25 1 1 0 0 0 0
..............................................................................................................................TGATAATGCAAAGGGTAAGTTTACA.................................................................................................... 25 1 4 0.25 1 0 1 0 0 0
..........................................................................................................................TAATTGATAATGCAAAGGGTA............................................................................................................ 21 0 4 0.25 1 1 0 0 0 0
.....................................................................................................................................GCAAAGGGTAAGTTTACTTAAAT............................................................................................... 23 0 4 0.25 1 1 0 0 0 0
..............................................................................................................................TGACAATGCAAAGTGTAAGTTTACT.................................................................................................... 25 2 4 0.25 1 0 1 0 0 0
..........................................................................................................................TAATTGATAATGCAAAGGGTAAG.......................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
.....................................................................................................CTGGTGTAGGACGTCCAGTTG................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0
.........................................................................................................................GTAATTGATAATGCAAAGGGTAAG.......................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
......................................................................................................TGGTGTAGGACGTCCAGTTG................................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0
............................................................................................................AGGACGTCCAGTTGTAATTGATAATG..................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
..................................................................................................GACCTGGTGTAGGACGTCCAG.................................................................................................................................... 21 0 4 0.25 1 0 1 0 0 0
................................................................................................................................ATAATGCAAAGGGTAAGTT........................................................................................................ 19 0 4 0.25 1 1 0 0 0 0
................................................................................................................................ATAATGCAAAGGGTAAGTTTACT.................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
.................................................................................................CGACCTGGTGTAGGACGTCCA..................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
......................................................................................................TGGTGTAGGACGTCCAGTTGTAAT............................................................................................................................. 24 0 4 0.25 1 0 1 0 0 0
..............................................................................................................................................................................................................AAGGCAGTAGCTAAGCCAGCA........................ 21 0 4 0.25 1 1 0 0 0 0
.........................................................................................................................GTAATTGATAATGCAAAGGACCAG.......................................................................................................... 24 3 4 0.25 1 1 0 0 0 0
......................................................................................................TGGTGTAGGACGTCCAGTTGTAATTGA.......................................................................................................................... 27 0 4 0.25 1 0 1 0 0 0
............................................................................................................................ATTGATAATGCAAAGGGTA............................................................................................................ 19 0 4 0.25 1 1 0 0 0 0
...........................................................................................................TAGGACGTCCAGTTGTAATTGATAA....................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0
.........................................................................................................................GTAATTGATAATGCAAAGGGTAAGTT........................................................................................................ 26 0 4 0.25 1 0 1 0 0 0
......................................................................................................TGGTGTAGGACGTCCAGTTGTAATTG........................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0
........................................................................................................................TGTAATTGATAATGCAAAGGGTAAGT......................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
............................................................................................................AGGACGTCCAGTTGTAATTGATAAT...................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
............................................................................................................................................................................................................AGAAGGCAGTAGCTAAGCCAG.......................... 21 0 4 0.25 1 1 0 0 0 0
.....................TGGCGTTCCTGCTCGTCCCAGTGTATC........................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0
......................................CCAGTGTATCTCGTCCTGCTGTATC............................................................................................................................................................................................ 25 1 5 0.20 1 1 0 0 0 0
..................................CGTCCCAGTGTATCTCGTCCT.................................................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
...........................TCCTGCTCGTCCCAGTGTATCTCGTCCA.................................................................................................................................................................................................... 28 1 5 0.20 1 0 1 0 0 0
............................................TATCTCGTCCTGCTGTAGCTCG......................................................................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0
..............................................................................................................................TGATAATCGAAAGGGTAAGT......................................................................................................... 20 2 5 0.20 1 0 1 0 0 0
...........................................GTATCTCGTCCTGCTGTAGCTCGTC....................................................................................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0
..............................TGCTCGTCCCAGTGTATCTCGTCCTGC.................................................................................................................................................................................................. 27 0 5 0.20 1 1 0 0 0 0
.........................................................................................ACGTGGCTCGACCTGGTGTAGGT........................................................................................................................................... 23 1 5 0.20 1 0 1 0 0 0
...........................TCCTGCTCGTCCCAGTGTATCTCGTCCT.................................................................................................................................................................................................... 28 0 5 0.20 1 1 0 0 0 0
..............................................TCTCGTCCTGCTGTAGCTCGTCCAGT................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0
.......................................................................................TAACGTGGCTCGACCTGGTGTAGGA........................................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0
.......................................CAGTGTATCTCGTCCTGCTGTAGC............................................................................................................................................................................................ 24 0 5 0.20 1 0 1 0 0 0
..........................TTCCTGCTCGTCCCAGTGTATCTCGTC...................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0
........................CGTTCCTGCTCGTCCCAGTGTT............................................................................................................................................................................................................. 22 1 5 0.20 1 0 1 0 0 0
.......................................................................................TAACGTGGCTCGACCTGGTGTAG............................................................................................................................................. 23 0 5 0.20 1 0 1 0 0 0
.............................................ATCTCGTCCTGCTGTAGCTCG......................................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
.......................................................................................TAACGTGGCTCCACCTGGTGTAGGA........................................................................................................................................... 25 1 5 0.20 1 0 1 0 0 0
......................................................................................TTAACGTGGCTCGACCTGGTGTAGG............................................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0
.....................................CCCAGTGTATCTCGTCCTGCTGTAGC............................................................................................................................................................................................ 26 0 5 0.20 1 1 0 0 0 0
.............................CTGCTCGTCCCAGTGTATCTCG........................................................................................................................................................................................................ 22 0 5 0.20 1 1 0 0 0 0
.........AGCTAATTTACTTGGCGTTCCTGCTCG....................................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0
.....................................CCCAGTGTATCTCGTCCTGCTG................................................................................................................................................................................................ 22 0 5 0.20 1 1 0 0 0 0
....................................TCCCAGTGTATCTCGTCCTGCTGTAG............................................................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0
..........................................TGTATCTCGTCCTGCTGTAGCTCGTC....................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0
...................................................TCCTGCTGTAGCTCGTCCAG.................................................................................................................................................................................... 20 0 6 0.17 1 0 0 1 0 0
...................................................TCCTGCTGTAGCTCGTCCAGTT.................................................................................................................................................................................. 22 0 6 0.17 1 1 0 0 0 0
..........................................................GTAGCTCATCCGGTTTTTGC............................................................................................................................................................................. 20 3 7 0.14 1 1 0 0 0 0
................................................................................................TCAAACTGGTTTAGGACGTC....................................................................................................................................... 20 3 7 0.14 1 0 0 1 0 0
.................................................................................................CAAACTGGTTTAGGACGTC....................................................................................................................................... 19 3 20 0.10 2 0 0 2 0 0
............................................................................GCAGCTGGTCTCAACGTG............................................................................................................................................................. 18 2 10 0.10 1 0 1 0 0 0
................................................................................................................................ATAATGCGACGGGTAATTTTA...................................................................................................... 21 3 11 0.09 1 1 0 0 0 0
......................................................................................................................................................................................................CGGGCCAGAAGGCATTCGC.................................. 19 3 13 0.08 1 1 0 0 0 0
...............................................................................GCTCGGCTGAACGAGGCT.......................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................................................................GCAAGCGACTGTTAATAAAA........... 20 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GGTCGTCCGTCGATTAAATGAACCGCAAGGACGAGCAGGGTCACATAGAGCAGGACGACATCGAGCAGGTCAAACACGTCGAGCAGAATTGCACCGAGCTGGACCACATCCTGCAGGTCAACATTAACTATTACGTTTCCCATTCAAATGAATTTAATACTTTCTAACACCTTATCTATTACATTTATTGGACTTAATGTCCGGTCTTCCGTCATCGATTCGGTCGTTGACGATTATTTTGGTTGTGGGGG
****************************************************************************************************...((....((((((((((((((((..((.....))..)).)))))))...))))))).........................))****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V119
head
 V117
male body
...................GAACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 27 0 5 20.40 102 57 45 0 0 0
.............................................................................................................CCTGCAGGTCAACATTAACTATTACGT................................................................................................................... 27 0 4 20.25 81 48 33 0 0 0
.............................................................................................................................................................................................................................GGTCGTTGACGATTATTTTGGTTGT..... 25 0 2 16.00 32 8 24 0 0 0
..................................GCAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 27 0 5 10.00 50 21 26 0 1 2
......................................................................................................................................................................................................GTCCGGTCTTCCGTCATCGATTCGG............................ 25 0 1 8.00 8 8 0 0 0 0
.................................................................................................GCTGGACCACATCCTGCAGGTCAACAT............................................................................................................................... 27 0 4 6.75 27 17 9 0 1 0
........................................................................................................CACATCCTGCAGGTCAACATTAACTAT........................................................................................................................ 27 0 4 6.25 25 19 6 0 0 0
......................................................................................................................................................................................................GTCCGGTCTTCCGTCATCGATTCGGT........................... 26 0 1 6.00 6 6 0 0 0 0
...........................................................................................................................................................................................................................TCGGTCGTTGACGATTATTTTGGT........ 24 0 2 6.00 12 8 3 0 1 0
.....................ACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 25 0 5 5.00 25 17 8 0 0 0
....................................AGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 25 0 5 4.80 24 5 18 1 0 0
.....................................GGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 24 0 5 4.40 22 2 20 0 0 0
..............................................AGAGCAGGACGACATCGAGCAGGT..................................................................................................................................................................................... 24 0 5 4.20 21 17 4 0 0 0
....................AACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 26 0 5 3.80 19 13 6 0 0 0
.........................................................................................................ACATCCTGCAGGTCAACATTAACTAT........................................................................................................................ 26 0 4 3.25 13 13 0 0 0 0
...........................................................................................................ATCCTGCAGGTCAACATTAACTAT........................................................................................................................ 24 0 4 3.25 13 9 4 0 0 0
...................................................................................CAGAATTGCACCGAGCTGGACCACAT.............................................................................................................................................. 26 0 2 3.00 6 0 6 0 0 0
................................................................................................................GCAGGTCAACATTAACTATTACGT................................................................................................................... 24 0 4 3.00 12 10 2 0 0 0
......................CCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 24 0 5 2.80 14 4 10 0 0 0
............................................................................................................................TAACTATTACGTTTCCCATTCAAATGAAT.................................................................................................. 29 0 4 2.75 11 11 0 0 0 0
...................................CAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 26 0 5 2.60 13 7 3 3 0 0
............................................................................................................................................................................................................................CGGTCGTTGACGATTATTTTGGTTGT..... 26 0 2 2.50 5 4 1 0 0 0
...................................................................................................TGGACCACATCCTGCAGGTCAACAT............................................................................................................................... 25 0 4 2.50 10 8 2 0 0 0
...........................................................................................................................................................................................................................TCGGTCGTTGACGATTATTTTGGTTGT..... 27 0 2 2.50 5 1 4 0 0 0
......................................................................................................ACCACATCCTGCAGGTCAACATTAACTAT........................................................................................................................ 29 0 4 2.50 10 10 0 0 0 0
...........................................................................................................ATCCTGCAGGTCAACATTAACTATT....................................................................................................................... 25 0 4 2.50 10 7 3 0 0 0
...............................................................................................................................................TCAAATGAATTTAATACTTTCTAACACCT............................................................................... 29 0 3 2.33 7 7 0 0 0 0
......................................GGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 23 0 5 2.20 11 1 10 0 0 0
..............................................................................................................................................................ACTTTCTAACACCTTATCTATTACAT................................................................... 26 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................GGTCTTCCGTCATCGATTCGGTCGT........................ 25 0 2 2.00 4 4 0 0 0 0
....................................................................................................................................................................................................................CATCGATTCGGTCGTTGACGATTAT.............. 25 0 2 2.00 4 4 0 0 0 0
...................GAACCGCAAGGACGAGCAGGGTCACA.............................................................................................................................................................................................................. 26 0 5 2.00 10 10 0 0 0 0
...................................................................................................................................................................................................AATGTCCGGTCTTCCGTCATCGAT................................ 24 0 1 2.00 2 2 0 0 0 0
.................................AGCAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 28 0 5 2.00 10 7 0 3 0 0
......................................................................CAAACACGTCGAGCAGAATTGCAC............................................................................................................................................................. 24 0 2 2.00 4 3 1 0 0 0
................................................................................................................GCAGGTCAACATTAACTATTACGTT.................................................................................................................. 25 0 4 1.75 7 5 2 0 0 0
................................................................GCAGGTCAACCACGTCGAGCAGAAT.................................................................................................................................................................. 25 1 2 1.50 3 2 0 0 0 1
....................................................................GTCAACCACGTCGAGCAGAATTGCAC............................................................................................................................................................. 26 1 2 1.50 3 2 1 0 0 0
.......................................................................................................CCACATCCTGCAGGTCAACATTAACTAT........................................................................................................................ 28 0 4 1.50 6 5 1 0 0 0
................................................................................................................GCAGGTCAACATTAACTATTACGTTT................................................................................................................. 26 0 4 1.50 6 4 2 0 0 0
.....................................................................................................................................................................................................................ATCGATTCGGTCGTTGACGATTAT.............. 24 0 2 1.50 3 1 2 0 0 0
....................................................GGACGACATCGAGCAGGTCAAACACGT............................................................................................................................................................................ 27 0 2 1.50 3 3 0 0 0 0
.........................................................................................................................................................TTAATACTTTCTAACACCTTATCTAT........................................................................ 26 0 3 1.33 4 4 0 0 0 0
..........................................................................................................CATCCTGCAGGTCAACATTAACTAT........................................................................................................................ 25 0 4 1.25 5 5 0 0 0 0
............................................................................................................................TAACTATTACGTTTCCCATTCAAAT...................................................................................................... 25 0 4 1.25 5 5 0 0 0 0
...CGTCCGTCGATTAAATGAACCGCAAGG............................................................................................................................................................................................................................. 27 0 5 1.20 6 6 0 0 0 0
.......................................................................................................................................................................................................TCCGGTCTTCCGTCATCGATTCGG............................ 24 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................TGTCCGGTCTTCCGTCATCGATT............................... 23 0 1 1.00 1 1 0 0 0 0
........................................................................................................CACATCCTGCAGGTCAACATTAACT.......................................................................................................................... 25 0 4 1.00 4 3 1 0 0 0
..............................................................................................................CTGCAGGTCAACATTAACTATTACGT................................................................................................................... 26 0 4 1.00 4 3 0 1 0 0
...............................................................................................................................................................CTTTCTAACACCTTATCTATTACAT................................................................... 25 0 1 1.00 1 0 1 0 0 0
...............................................................................CGAGCAGAATTGCACCGAGCTGGAC................................................................................................................................................... 25 0 4 1.00 4 1 3 0 0 0
............................................................................................................................................................................................................................CGGTCGTTGACGATTATTTTGGT........ 23 0 2 1.00 2 2 0 0 0 0
............................................................................................................................................................................................................................CGGTCGTTGACGATTATTTTGGTTG...... 25 0 2 1.00 2 2 0 0 0 0
.....................................................................................................................................................................................................TGTCCGGTCTTCCGTCATCGATTC.............................. 24 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................TTTCTAACACCTTATCTATTACATTTAT............................................................... 28 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................TCGGTCGTTGACGATTATTTTGGTT....... 25 0 2 1.00 2 2 0 0 0 0
...............................................................................CGAGCAGAATTGCACCGAGCTGGACC.................................................................................................................................................. 26 0 2 1.00 2 1 1 0 0 0
..........................................................................................................................................................TAATACTTTCTAACACCTTATCTAT........................................................................ 25 0 3 1.00 3 3 0 0 0 0
.........................................................................................................................................................................................................CGGTCTTCCGTCATCGATTCGGTCGT........................ 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................ATTGGACTTAATGTCCGGTCTTCCGT....................................... 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................AATACTTTCTAACACCTTATCTATTACAT................................................................... 29 0 1 1.00 1 1 0 0 0 0
.............................................................................................................CCTGCAGGTCAACATTAACTAT........................................................................................................................ 22 0 4 1.00 4 3 1 0 0 0
.............................................................................................................................................................................................................................GGTCGTTGACGATTATTTTGGT........ 22 0 2 1.00 2 1 1 0 0 0
..............................................................................................................................................................................................................................GTCGTTGACGATTATTTTGGTTGT..... 24 0 2 1.00 2 0 2 0 0 0
.................................................................................................................................................................TTCTAACACCTTATCTATTACATTT................................................................. 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................CTCTAACACCTTATCTATTACATT.................................................................. 24 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................TCAAATGAATTTAATACTTTCTAACACC................................................................................ 28 0 3 1.00 3 3 0 0 0 0
..................................................................................GCAGAATTGCACCGAGCTGGACCACAT.............................................................................................................................................. 27 0 2 1.00 2 2 0 0 0 0
.................................................................................................GCTGGACCACATCCTGCAGGTCAACATT.............................................................................................................................. 28 0 4 1.00 4 4 0 0 0 0
...............................................................................CGAGCAGAATTGCACCGAGCTGGACCA................................................................................................................................................. 27 0 2 1.00 2 0 2 0 0 0
....................................................GGACGACATCGAGCAGGTCAACCACGT............................................................................................................................................................................ 27 1 3 1.00 3 1 2 0 0 0
.......................................................................................................................................................................................................TCCGGTCTTCCGTCATCGATTCGGTCGT........................ 28 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................TAATGTCCGGTCTTCCGTCATCGAT................................ 25 0 1 1.00 1 1 0 0 0 0
....................TACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 26 1 5 0.80 4 4 0 0 0 0
......................................................................................................ACCACATCCTGCAGGTCAACATTAACT.......................................................................................................................... 27 0 4 0.75 3 2 1 0 0 0
...................................................................................................TGGACCACATCCTGCAGGTCAACATT.............................................................................................................................. 26 0 4 0.75 3 3 0 0 0 0
.............................................................................................................CCTGCAGGTCAACATTAACTATTACGTT.................................................................................................................. 28 0 4 0.75 3 2 1 0 0 0
....................................................................................................GGACCACATCCTGCAGGTCAACAT............................................................................................................................... 24 0 4 0.75 3 3 0 0 0 0
........................................................................................................CACATCCTGCAGGTCAACATTAACTATT....................................................................................................................... 28 0 4 0.75 3 3 0 0 0 0
.....................................................................................................................TCAACATTAACTATTACGTTTCCCAT............................................................................................................ 26 0 4 0.75 3 2 1 0 0 0
................................................................................................AGCTGGACCACATCCTGCAGGTCAACAT............................................................................................................................... 28 0 4 0.75 3 3 0 0 0 0
................................................AGCAGGACGACATCGAGCAGGTCAA.................................................................................................................................................................................. 25 0 6 0.67 4 2 2 0 0 0
.........................................................................................................................................TCCCATTCAAATGAATTTAATACTTTCT...................................................................................... 28 0 3 0.67 2 2 0 0 0 0
GGTCGTCCGTCGATTAAATGAACCGC................................................................................................................................................................................................................................. 26 0 5 0.60 3 3 0 0 0 0
......CCGTCGATTAAATGAACCGCAAGGAC........................................................................................................................................................................................................................... 26 0 5 0.60 3 1 2 0 0 0
.......................CGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 23 0 5 0.60 3 1 2 0 0 0
....GTCCGTCGATTAAATGAACCGCAAGG............................................................................................................................................................................................................................. 26 0 5 0.60 3 3 0 0 0 0
...........................AGGACGAGCAGGGTCACATAGAGCAG...................................................................................................................................................................................................... 26 0 5 0.60 3 3 0 0 0 0
......................................................................................AATTGCACCGAGCTGGACCACAT.............................................................................................................................................. 23 0 5 0.60 3 1 2 0 0 0
.......................CGCAAGGACGAGCAGGGTCACATAGA.......................................................................................................................................................................................................... 26 0 5 0.60 3 0 2 0 0 1
..............................................AGAGCAGGACGACATCGAGCAGG...................................................................................................................................................................................... 23 0 5 0.60 3 3 0 0 0 0
..................AGAACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 28 1 5 0.60 3 3 0 0 0 0
.............................GACGAGCAGGGTCACATAGAGCAGG..................................................................................................................................................................................................... 25 0 5 0.60 3 3 0 0 0 0
........................................................................................................CACATCCTGCAGGTCAACATTAACTA......................................................................................................................... 26 0 4 0.50 2 2 0 0 0 0
................................................................GCAGGTCAACCACGTCGAGCAGAA................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
......................................................................CAACCACGTCGAGCAGAATTGCAC............................................................................................................................................................. 24 1 2 0.50 1 0 1 0 0 0
...................................................................GGTCAACCACGTCGAGCAGAATTG................................................................................................................................................................ 24 1 2 0.50 1 1 0 0 0 0
..............................................................................................CGAGCTGGACCACATCCTGCAGGT..................................................................................................................................... 24 0 4 0.50 2 1 1 0 0 0
.............................................................................................................CCTGCAGGTCAACATTAACTATTAC..................................................................................................................... 25 0 4 0.50 2 1 1 0 0 0
.................................................................CAGGTCAAACACGTCGAGCAGAATT................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
..............................................................................................CGAGCTGGACCACATCCTGCAGGTCA................................................................................................................................... 26 0 4 0.50 2 0 2 0 0 0
...........................................................................................................ATCCTGCAGGTCAACATTAACTATTACGT................................................................................................................... 29 0 4 0.50 2 2 0 0 0 0
.............................................................................................................................................................................................................................GGTCCTTGACGATTATTTTGGTTGT..... 25 1 2 0.50 1 0 1 0 0 0
..................................................................AGGTCAACCACGTCGAGCAGAATT................................................................................................................................................................. 24 1 2 0.50 1 0 1 0 0 0
..................................................................................................CTGGACCACATCCTGCAGGTCAACAT............................................................................................................................... 26 0 4 0.50 2 1 1 0 0 0
.......................................................................................................................................................................................................................CGATTCGGTCGTTGACGATTATTTT........... 25 0 2 0.50 1 1 0 0 0 0
...............................................................TGCAGGTCAAACACGTCGAGCAGAAT.................................................................................................................................................................. 26 1 2 0.50 1 0 1 0 0 0
.........................................................................................................ACATCCTGCAGGTCAACATTAACTA......................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0
....................................................................................................................................................................................................................CATCGATTCGGTCGTTGACGATTA............... 24 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................................TTCGGTCGTTGACGATTATTTTGGT........ 25 0 2 0.50 1 1 0 0 0 0
............................................................................................................TCCTGCAGGTCAACATTAACTATTACGT................................................................................................................... 28 0 4 0.50 2 1 1 0 0 0
...................................................................GGTCAAACACGTCGAGCAGAATTGCAC............................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
.....................................................................TCAACCACGTCGAGCAGAATTGCAC............................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
.................................................GCAGGACGACATCGAGCAGGTCAAA................................................................................................................................................................................. 25 0 2 0.50 1 0 1 0 0 0
.............................................................................................................CCTGCAGGTCAACATTAACTATTACG.................................................................................................................... 26 0 4 0.50 2 2 0 0 0 0
.............................................................................................................................................................................................................................GGTCGTTGACGATTATTTTGGTTT...... 24 1 2 0.50 1 0 1 0 0 0
...................................................................................................................................................................................................................TCACCGATTCGGTCGTTGACGATTATT............. 27 1 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................GGTCTTCCGTCATCGATTCGGTCGTT....................... 26 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................GGTCTTCCGTCATCGATTCGGTCG......................... 24 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................................TGTCGTTGACGATTATTTTGGTTGT..... 25 1 2 0.50 1 0 1 0 0 0
............................................................................................................................TAACTATTACGTTTCCCATTCAAATGAA................................................................................................... 28 0 4 0.50 2 2 0 0 0 0
....................................................................................................................................................................................................................................GACGATTATTTTGGTTGT..... 18 0 2 0.50 1 1 0 0 0 0
.......................................................................................................CCACATCCTGCAGGTCAACATTAAC........................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0
................................................................................................................................................................................................................................CGTTGACGATTATTTTGGTTGT..... 22 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................................ATCGATTCGGTCGTTGACGATTATTTT........... 27 0 2 0.50 1 0 1 0 0 0
..........................................................................................................................................................................................................GGTCTTCCGTCGTCGATTCGGTC.......................... 23 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................................CGATTCGGTCGTTGACGATTAT.............. 22 0 2 0.50 1 0 1 0 0 0
................................................AGCAGGACGACATCGAGCAGGTCAAAC................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................TCGATTCGGTCGTTGACGATTA............... 22 0 2 0.50 1 0 1 0 0 0
...........................................................................................................ATCCTGCAGGTCAACATTAACTA......................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0
.........................................................................................................................................................................................................................TTTCGGTCGTTGACGATTATTTTGGT........ 26 1 2 0.50 1 0 1 0 0 0
..........................................................................................................................................................................................................GGTCTTCCGTCATCGATTCGGT........................... 22 0 2 0.50 1 1 0 0 0 0
.....................................................................................GAATTGCACCGAGCGGGACCACAT.............................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0
......................................................ACGACATCGAGCAGGTCAAACACGT............................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................................TCGGTCGTTGACGATTATTTTGG......... 23 0 2 0.50 1 1 0 0 0 0
...............................................................................................................TGCAGGTCAACATTAACTATTACGT................................................................................................................... 25 0 4 0.50 2 2 0 0 0 0
........................................................................................................................................................................................................................AATTCGGTCGTTGACGATTATTTTGGT........ 27 1 2 0.50 1 1 0 0 0 0
.............................................................CGAGCAGGTCAACCACGTCGAGCAGAAT.................................................................................................................................................................. 28 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................CTATTACGTTTCCCATTCAAATGAAT.................................................................................................. 26 0 4 0.50 2 2 0 0 0 0
.......................................................CGACATCGAGCAGGTCAAACACGT............................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
...................................................................GGTCAACCACGTCGAGCAGAATT................................................................................................................................................................. 23 1 2 0.50 1 1 0 0 0 0
....................................................................................AGAATTGCACCGAGCTGGACCACATC............................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
...............................................GAGCAGGACGACATCGAGCAGGTCAAA................................................................................................................................................................................. 27 0 2 0.50 1 0 1 0 0 0
................................................AGCAGGACGACATCGAGCAGGTCAAA................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
........................GCAAGGACGAGCAGGGTCACATAGA.......................................................................................................................................................................................................... 25 0 5 0.40 2 1 1 0 0 0
............................GGACGAGCAGGGTCACATAGAGCAG...................................................................................................................................................................................................... 25 0 5 0.40 2 2 0 0 0 0
...........................AGGACGAGCAGGGTCACATAGAGCAGG..................................................................................................................................................................................................... 27 0 5 0.40 2 2 0 0 0 0
........................GCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 22 0 5 0.40 2 1 1 0 0 0
.......................................................................................ATTGCACCGAGCTGGACCACATCCT........................................................................................................................................... 25 0 5 0.40 2 0 2 0 0 0
..........................AAGGACGAGCAGGGTCACATAGAG......................................................................................................................................................................................................... 24 0 5 0.40 2 2 0 0 0 0
..............................................AGAGCAGGACGACATCGAGCAGGTCA................................................................................................................................................................................... 26 0 5 0.40 2 1 1 0 0 0
.....................TCCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 25 1 5 0.40 2 2 0 0 0 0
..........CGATTAAATGAACCGCAAGGACGA......................................................................................................................................................................................................................... 24 0 5 0.40 2 0 2 0 0 0
.............................................TAGAGCAGGACGACATCGAGCAGGT..................................................................................................................................................................................... 25 0 5 0.40 2 2 0 0 0 0
..........................AAGGACGAGCAGGGTCACATAGAGC........................................................................................................................................................................................................ 25 0 5 0.40 2 1 1 0 0 0
.............................TACGAGCAGGGTCACATAGAGCAGGAC................................................................................................................................................................................................... 27 1 5 0.40 2 0 0 2 0 0
...............................CGAGCAGGGTCACATAGAGCAGGAC................................................................................................................................................................................................... 25 0 5 0.40 2 0 2 0 0 0
.........................................................................................TGCACCGAGCTGGACCACATCCT........................................................................................................................................... 23 0 5 0.40 2 2 0 0 0 0
...................TGACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 27 2 5 0.40 2 2 0 0 0 0
................................................................................................TGCTGGACCACATCCTGCAGGTCAACAT............................................................................................................................... 28 1 5 0.40 2 0 2 0 0 0
...................GAACCGCAAGGACGAGCAGGGTCAC............................................................................................................................................................................................................... 25 0 5 0.40 2 1 1 0 0 0
....GTCCGTCGATTAAATGAACCGCAAG.............................................................................................................................................................................................................................. 25 0 5 0.40 2 2 0 0 0 0
..................TGAACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 28 0 5 0.40 2 1 1 0 0 0
..............TAAATGAACCGCAAGGACGAGCAGGGT.................................................................................................................................................................................................................. 27 0 5 0.40 2 1 1 0 0 0
.................................TGCAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 28 1 5 0.40 2 1 0 1 0 0
...............................................GAGCAGGACGACATCGAGCAGGTCAA.................................................................................................................................................................................. 26 0 5 0.40 2 1 1 0 0 0
............................................TTAGAGCAGGACGACATCGAGCAGGT..................................................................................................................................................................................... 26 1 5 0.40 2 2 0 0 0 0
GGTCGTCCGTCGATTAAAT........................................................................................................................................................................................................................................ 19 0 5 0.40 2 1 1 0 0 0
....................AACCGCAAGGACGAGCAGGGTCACA.............................................................................................................................................................................................................. 25 0 5 0.40 2 2 0 0 0 0
....................................................................................................................................................TGAATTTAATACTTTCTAACACCTTAT............................................................................ 27 0 3 0.33 1 0 1 0 0 0
.......................................................CGACATCAAGCAGGTCAACCACGT............................................................................................................................................................................ 24 2 3 0.33 1 0 0 0 1 0
.....................................................GACGACATCGAGCAGGTCAACCACGT............................................................................................................................................................................ 26 1 3 0.33 1 0 1 0 0 0
.............................................................................................................................................................TACTTTCTAACACCTTATCTA......................................................................... 21 0 3 0.33 1 1 0 0 0 0
....................................................GGACGACATCTAGCAGGTCAACCACGT............................................................................................................................................................................ 27 2 3 0.33 1 0 1 0 0 0
.................................................GCAGGACGACATCGAGCAGGTCAA.................................................................................................................................................................................. 24 0 6 0.33 2 0 2 0 0 0
........................................................................................................................................TTCCCATTCAAATGAATTTAATACTTTCT...................................................................................... 29 0 3 0.33 1 1 0 0 0 0
.............................................................................................................................................................TACTTTCTAACACCTTATC........................................................................... 19 0 3 0.33 1 1 0 0 0 0
.....................................................................................................................................................GAATTTAATACTTTCTAACACCTTAT............................................................................ 26 0 3 0.33 1 1 0 0 0 0
..........................................................................................................................................CCCATTCAAATGAATTTAATACTTTCT...................................................................................... 27 0 3 0.33 1 1 0 0 0 0
....................................................................................................................................ACGTTTCCCATTCAAATGAATTTAAT............................................................................................. 26 0 4 0.25 1 1 0 0 0 0
............................................................................................................................TAACTATTACGTTTCCCATTCAAA....................................................................................................... 24 0 4 0.25 1 1 0 0 0 0
..............................................................................................CGAGCTGGACCACATCCTGCAGGTCAACAT............................................................................................................................... 30 0 4 0.25 1 0 0 0 0 1
................................................................................................................GCAGGTCGACATTAACTATTACGTTT................................................................................................................. 26 1 4 0.25 1 1 0 0 0 0
......................................................................................................................CAACATTAACTATTACGTTTCCCAT............................................................................................................ 25 0 4 0.25 1 1 0 0 0 0
...................................................................................................................................TACGTTTCCCATTCAAATGAATTTAA.............................................................................................. 26 0 4 0.25 1 1 0 0 0 0
................................................................................................................GCAGGTCAACATTAACTATTACG.................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
.............................................................................GTCGAGCAGAATTGCACCGAGCTGGA.................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
.............................................................................................................CCTGCAGGTCAACATTAAATATTACGT................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0
.....................................................................................................GACCACATCCTGCAGGTCAACATTAACT.......................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0
................................................................................................................................................................................................................CCGTCATCGATTCGGTCGT........................ 19 0 4 0.25 1 1 0 0 0 0
.............................................................................................................CCTGCAGTTCAACATTAACTATTACGT................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0
.............................................................................................CCGAGCTGGACCACATCCTGCAGGT..................................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0
................................................................................................AGCTGTACCACATCCTGCAGGTCAACAT............................................................................................................................... 28 1 4 0.25 1 0 1 0 0 0
..............................................................................................................CTGCAGGTCAACATTAACTATTACG.................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0
................................................................................................................GCAGGTCAACATTAACTATT....................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0
.......................................................................................................................................TTTCCCATTCAAATGAATTTA............................................................................................... 21 0 4 0.25 1 0 1 0 0 0
..........................................................................................GCACCGAGCTGGACCACATCCTGCAGGT..................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0
...................................................................................................TGGACCACATCCTCCAGGTCAACAT............................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0
..............................................................................................CGAGCTGGAACACATCCTGCAGGTCA................................................................................................................................... 26 1 4 0.25 1 0 1 0 0 0
.............................................................................................................CCTGCAGGTCAACATTAACTATTACGTTT................................................................................................................. 29 0 4 0.25 1 1 0 0 0 0
.................................................................................................................................ATTACGTTTCCCATTCAAATGAAT.................................................................................................. 24 0 4 0.25 1 1 0 0 0 0
............................................................................................ACCGAGCTGGACCACATCCTGCAGGT..................................................................................................................................... 26 0 4 0.25 1 0 1 0 0 0
....................................................................................................GGACCACATCCTGCAGGTCAACATTAACT.......................................................................................................................... 29 0 4 0.25 1 1 0 0 0 0
.................................................................................................................CAGGTCAACATTAACTATTACGT................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
...................................................................................................................................TACGTTTCCCATTCAAATGAATTTAATAC........................................................................................... 29 0 4 0.25 1 1 0 0 0 0
.............................................................................................................TCTGCAGGTCAACATTAACTATTACGT................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0
.............................................................................................................CTTGCAGGTCAACATTAACTATTACGT................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0
...................................................................................................................................TACGTTTCCCATTCAAATGAATTTAAT............................................................................................. 27 0 4 0.25 1 0 1 0 0 0
........................................................................................................CACATCCTGCAGGTCGACATTAACTAT........................................................................................................................ 27 1 4 0.25 1 1 0 0 0 0
..........................................................................................................................ATTAACTATTACGTTTCCCATTCAAAT...................................................................................................... 27 0 4 0.25 1 1 0 0 0 0
.............................................................................................................CCTTCAGGTCAACATTAACTATTACGT................................................................................................................... 27 1 4 0.25 1 0 1 0 0 0
...................................................................................................TGGACCACATCCTGCAGGTCAACA................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0
.....................................................................................................................................CGTTTCCCATTCAAATGAAT.................................................................................................. 20 0 4 0.25 1 1 0 0 0 0
....................................................................................................................GTCAACATTAACTATTACGTTTCCCATT........................................................................................................... 28 0 4 0.25 1 1 0 0 0 0
......................................................................................................ACCACATCCTGCAGGTCAACATTAAC........................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
..............................................................................................................................ACTATTACGTTTCCCATTCAAAT...................................................................................................... 23 0 4 0.25 1 0 1 0 0 0
.....................................................................................................GACCACATCCTGCAGGTCAACATT.............................................................................................................................. 24 0 4 0.25 1 0 1 0 0 0
................................................................................................CGCCGGACCACATCCTGCAGGTCAACAT............................................................................................................................... 28 2 4 0.25 1 0 1 0 0 0
..............................................................................................CGAGCTGGACCACATCCTGCAGGTCAAC................................................................................................................................. 28 0 4 0.25 1 1 0 0 0 0
............................................................................................................................TAACTATTACGTTTCCCCTTCAAATGAA................................................................................................... 28 1 4 0.25 1 1 0 0 0 0
...........................................................................................................CCCCTGCAGGTCAACATTAACTATTACGT................................................................................................................... 29 2 4 0.25 1 1 0 0 0 0
......................................................................................................ACCACATCCTGCAGGTCAACATTAA............................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0
........................................................................................................................ACATTAACTATTACGTTTCCCAT............................................................................................................ 23 0 4 0.25 1 0 1 0 0 0
.....................................................................................................................TCAACATTAACTATTACGTTTC................................................................................................................ 22 0 4 0.25 1 1 0 0 0 0
..............................................................................................CGAGCTGGACCACATCCTGCAGG...................................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
.........................................................................................................ACATCCTGCAGGTCAACATTAAC........................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0
............................................................................................................TCCTGCAGGTCAACATTAACTAT........................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0
.............................................................................................................................AACTATTACGTTTCCCATTCAAATGAAT.................................................................................................. 28 0 4 0.25 1 1 0 0 0 0
...................................................................................................................................TACGTTTCCCATTCAAATGAATT................................................................................................. 23 0 4 0.25 1 1 0 0 0 0
....................AACCGCAAGGACGAGCAGGGTCACATA............................................................................................................................................................................................................ 27 0 5 0.20 1 0 1 0 0 0
.....................................GGGTCACATAGAGCAAGACGACAT.............................................................................................................................................................................................. 24 1 5 0.20 1 0 1 0 0 0
.....................................GGGTCACATAGCGCAGGACGACAT.............................................................................................................................................................................................. 24 1 5 0.20 1 0 1 0 0 0
.....................................GGGACACATAGAGCAGTACGACAT.............................................................................................................................................................................................. 24 2 5 0.20 1 0 1 0 0 0
...............................CGAGCAGGGTCACATAGAGCAGGACGA................................................................................................................................................................................................. 27 0 5 0.20 1 1 0 0 0 0
....................................................................................ACAATTGCACCGAGCTGGACCAC................................................................................................................................................ 23 1 5 0.20 1 0 1 0 0 0
............................GGACGAGCAGGGTCACATAGAGCAGG..................................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0
.....................ACCGCAAGGACGAGCAGGGTCACATAG........................................................................................................................................................................................................... 27 0 5 0.20 1 0 1 0 0 0
...................GTACCGGAATGACGAGCAGGGT.................................................................................................................................................................................................................. 22 3 5 0.20 1 0 0 0 1 0
.................................AGCAGGGTCACATAGAGCAGGACGA................................................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0
................................GAGCAGGGTCACATAGAGCAGGACGA................................................................................................................................................................................................. 26 0 5 0.20 1 0 1 0 0 0
...................GAACCGCAAGGACGAGCAGGGTCA................................................................................................................................................................................................................ 24 0 5 0.20 1 0 1 0 0 0
.......CGTCGATTAAATGAACCGCAAGGAC........................................................................................................................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0
.........................................CACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 20 0 5 0.20 1 1 0 0 0 0
..............TAAATGAACCGCAAGGACGAGCAGGGTA................................................................................................................................................................................................................. 28 1 5 0.20 1 1 0 0 0 0
.....................................GGGTCACATAGAGCAGGACGACA............................................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0
....................................AGGGTCACATAGAGCAGGACGACA............................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
..................................GCAGGGTCACATAGAGCAGGACGAC................................................................................................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0
................................................................................................TGCTGGACCACATCCTGCAGGTCAACA................................................................................................................................ 27 1 5 0.20 1 1 0 0 0 0
..............................................AGAGCAGGACGACATCGAGCAGGTCAAC................................................................................................................................................................................. 28 1 5 0.20 1 1 0 0 0 0
....................................................................GTCAAGCGCGTCGAGCGGAA................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0
..................................................................................................................................................................................................................GTCATCGATTCGGTCGTTGACGAT................. 24 0 5 0.20 1 0 1 0 0 0
.................ATGAACCGCAAGGACGAGCAGGGT.................................................................................................................................................................................................................. 24 0 5 0.20 1 0 1 0 0 0
.........................................CACATAGAGCAGGACGACATCGAGCA........................................................................................................................................................................................ 26 0 5 0.20 1 0 1 0 0 0
.......................................................................................ATTGCACCGAGCTGGACCACAT.............................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0
...........................................CATAGAGCAGGACGACATCGAGCAGGT..................................................................................................................................................................................... 27 0 5 0.20 1 0 1 0 0 0
.................................TTAAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 28 3 5 0.20 1 1 0 0 0 0
......................CCGCAAGGACGAGCAGGGTCACA.............................................................................................................................................................................................................. 23 0 5 0.20 1 0 1 0 0 0
..................................GCAGGGTCACATAGATCAGGACGACAT.............................................................................................................................................................................................. 27 1 5 0.20 1 0 1 0 0 0
..............................................AGAGCAGGACGACATCGAGCAGGTCAA.................................................................................................................................................................................. 27 0 5 0.20 1 1 0 0 0 0
...................TTACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 27 2 5 0.20 1 0 1 0 0 0
...............................CGAGCAGGGTCACATAGAGCA....................................................................................................................................................................................................... 21 0 5 0.20 1 0 0 0 1 0
..........CGATTAAATGAACCGCAAGGACGAGC....................................................................................................................................................................................................................... 26 0 5 0.20 1 0 1 0 0 0
........................................................................................TTGCACCGAGCTGGACCACAT.............................................................................................................................................. 21 0 5 0.20 1 0 1 0 0 0
..........................................ACATAGAGCAGGACGACATCGAGCAGGT..................................................................................................................................................................................... 28 0 5 0.20 1 1 0 0 0 0
......................CCGCAAGGACGAGCAGGTTCACAT............................................................................................................................................................................................................. 24 1 5 0.20 1 0 1 0 0 0
..................................GCAGGGTCACATAGAGCAGGACGACA............................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0
...............................................GAGCAGGACGACATCGAGCAGGT..................................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0
.................................GTCAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 28 2 5 0.20 1 0 0 1 0 0
......................CCGCAAGGACAAGCAGGTTCACAT............................................................................................................................................................................................................. 24 2 5 0.20 1 0 1 0 0 0
............................ATACGAGCAGGGTCACATAGAGCAG...................................................................................................................................................................................................... 25 2 5 0.20 1 1 0 0 0 0
........................TATAGGACGAGCAGGGTCACATAGAGC........................................................................................................................................................................................................ 27 3 5 0.20 1 0 1 0 0 0
......CCGTCGATTAAATGAACCGCAAGGA............................................................................................................................................................................................................................ 25 0 5 0.20 1 0 1 0 0 0
...................GAACCGCAAGGACGAGCAGGCTCACAT............................................................................................................................................................................................................. 27 1 5 0.20 1 1 0 0 0 0
..............................................AGAGCAGGACTACATCGAGCAGGT..................................................................................................................................................................................... 24 1 5 0.20 1 0 1 0 0 0
.............................................................................................CCGAGCTGGACCACATCCT........................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0
..................................GCAGGGTCACATAGATTAGGACGACAT.............................................................................................................................................................................................. 27 2 5 0.20 1 0 1 0 0 0
...................GAACCGCAAGGATGAGCAGGGTCACAT............................................................................................................................................................................................................. 27 1 5 0.20 1 0 1 0 0 0
.......CGTCGATTAAATGAACCGCAA............................................................................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
....................................AGGGTCACATAGAGCAGAACGACAT.............................................................................................................................................................................................. 25 1 5 0.20 1 1 0 0 0 0
..............................................AGAGCAGGACGACATCGAGCAGGTC.................................................................................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0
...................GAACCGCAAGGACGAGCAGCGTCACAT............................................................................................................................................................................................................. 27 1 5 0.20 1 0 1 0 0 0
..............................TCGAGCAGGGTCACATAGAGCAGGAC................................................................................................................................................................................................... 26 1 5 0.20 1 0 0 0 1 0
....................................ATGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 25 1 5 0.20 1 0 1 0 0 0
............................GGACGAGCAGGGTCACATAGAGC........................................................................................................................................................................................................ 23 0 5 0.20 1 1 0 0 0 0
.................................ATCAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 28 1 5 0.20 1 1 0 0 0 0
..................................ATAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 27 2 5 0.20 1 1 0 0 0 0
...................................CAGGGTCACATAGAGCAGGACGACATCG............................................................................................................................................................................................ 28 0 5 0.20 1 1 0 0 0 0
...................................CAGGGTCACATAGAGCAGGACGACA............................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0
...CGTCCGTCGATTAAATGAACCGCAAG.............................................................................................................................................................................................................................. 26 0 5 0.20 1 1 0 0 0 0
........................GCAAGGACGAGCAGGGTCACATAG........................................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
..............TAAATGAACCGTAGGGACGAGCAGGGT.................................................................................................................................................................................................................. 27 2 5 0.20 1 1 0 0 0 0
............................................ATAGAGCAGGACGACATCGAGCAGGT..................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0
..................................GCAGGGTCACATAGAGCAGGACGACAC.............................................................................................................................................................................................. 27 1 5 0.20 1 0 1 0 0 0
............ATTAAATGAACCGCAAGGACGAGCA...................................................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0
.........................CAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 21 0 5 0.20 1 1 0 0 0 0
.................................AGTAGGGTCACATAGAGCAGGACGACAT.............................................................................................................................................................................................. 28 1 5 0.20 1 1 0 0 0 0
...................AAACCGCAAGGACGAGCAGGGTCACAT............................................................................................................................................................................................................. 27 1 5 0.20 1 1 0 0 0 0
............................................CTAGAGCAGGACGACATCGAGCAGGT..................................................................................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0
..........................AAGGACGAGCAGGGTCACATAGAGCAG...................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0
...............................................GAGCAGGACGACATCGAGCAGGTCA................................................................................................................................................................................... 25 0 5 0.20 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004887:305632-305882 - dwi_2364 CCAGCAGGCAGCTAATTTACTTGGCGTTCCTGCTCGTCCCAGTGTATCTCGTCCTGCTGTAGCTCGTCCAGTTTGTGCAGCTCGTCTTAACGTGGCTCGACCTGGTGTAGGACGTCCAGTTGTAATTGATAATGCAAAGGGTAAGTTTACTTAAATTATGAAAGATTGTGGAATAGATAATGTAAATAACCTGAATTACAGGCCAGAAGGCAGTAGCTAAGCCAGCAACTGCTAATAAAACCAACACCCCC
dp5 4_group4:340395-340398 - CC----------------------------------------------------------------------------------------------CC---------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_68:97978-97981 + CC----------------------------------------------------------------------------------------------CC---------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000299277:527392-527415 + AC----------------------------------------------------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------------------------CTAGCACCACTAGCACCACT
droRho1 scf7180000778253:16343-16386 - T------------------------------------------------------GGTGCAGCTGGTCCAGGTGGTGCAGCTCCCCCTGTCGTCGCTC---------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
CCAGCAGGCAGCTAATTTACTTGGCGTTCCTGCTCGTCCCAGTGTATCTCGTCCTGCTGTAGCTCGTCCAGTTTGTGCAGCTCGTCTTAACGTGGCTCGACCTGGTGTAGGACGTCCAGTTGTAATTGATAATGCAAAGGGTAAGTTTACTTAAATTATGAAAGATTGTGGAATAGATAATGTAAATAACCTGAATTACAGGCCAGAAGGCAGTAGCTAAGCCAGCAACTGCTAATAAAACCAACACCCCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................TGATAATGCAAAGGGTAAGTTTACT....................................................................................................2543.2513010120
..................................................................TCCAGTTTGTGCAGCTCGTCTTAACG...............................................................................................................................................................2621.50300030
.....................................................................................................................................................................................................ACAGGCCAGAAGGCAGTAGCTAAGA.............................2511.00101000
...............................................................................GCTCGTCTTAACGTGGCTCGACCTGG..................................................................................................................................................2621.00202000
...................................................................................................................................................................................................................................ACTGCTAATAAAACCAACACCC..2221.00202000
.................................................................................TCGTCTTAACGTGGCTCGACCTGGTG................................................................................................................................................2621.00200020
..................................................................................................................................................................AGATTGTGGAATAGATAATGTA...................................................................2211.00101000
..................................................................................................................................................................AGATTGTGGAATAGATAATGTAAATAAC.............................................................2811.00100010
............................................................................................................................ATTGATAATGCAAAGGGTAAG..........................................................................................................2140.75300030
...............................................................................................................................................AGTTTACTTAAATTATGAAAGAT.....................................................................................2330.67202000
.........................................................................................................................................................AATTATGAAAGATTGTGGAAT.............................................................................2130.67202000
.....................................................................................................................................................................................................................................TGCTAATAAAACCAACACCCC.2120.50101000
..................................................................................CGTCTTAACGTGGCTCGACCTGGT.................................................................................................................................................2420.50101000
................................................................CGTCCAGTTTGTGCAGCTCGTC.....................................................................................................................................................................2220.50101000
............................................................................................TGGCTCGACCTGGTGTAGGACGTC.......................................................................................................................................2440.50201010
.........................................................TGTAGCTCGTCCAGTTTGTGC.............................................................................................................................................................................2120.50101000
.........................................................................................................................GTAATTGATAATGCAAAGGGTA............................................................................................................2240.50201010
...............................................................................................................................GATAATGCAAAGGGTAAGTTTACT....................................................................................................2440.50201010
.........................................................................................................TGTAGGACGTCCAGTTGTAATTGATAA.......................................................................................................................2740.50201010
..............................................................................................................................TGATAATGCAAAGGGTAAGTTTACTTA..................................................................................................2740.50200020
..............................................................................................................................TGATAATGCAAAGGGTAAGTTTAC.....................................................................................................2440.50200020
...........................TCCTGCTCGTCCCAGTGTATCTCGTCC.....................................................................................................................................................................................................2750.40202000
..............................................TCTCGTCCTGCTGTAGCTCGTCCAG....................................................................................................................................................................................2550.40200020
.......................................CAGTGTATCTCGTCCTGCTGTAGCT...........................................................................................................................................................................................2550.40202000
....................................TCCCAGTGTATCTCGTCCTGCTG................................................................................................................................................................................................2350.40202000
....................................TCCCAGTGTATCTCGTCCTGCT.................................................................................................................................................................................................2250.40202000
....................................TCCCAGTGTATCTCGTCCTGCTGTAGC............................................................................................................................................................................................2750.40202000
....................................TCCCAGTGTATCTCGTCCTGCTGT...............................................................................................................................................................................................2450.40202000
............................................................................................................................................................TATGAAAGATTGTGGAATAGAT.........................................................................2230.33100100
.........................................................................................................................................................AATTATGAAAGATTGTGGAATAGA..........................................................................2430.33101000
...............................................................................................................................................AGTTTACTTAAATTATGAAAGATTGTG.................................................................................2730.33100010
......................................................................................................................................................TTAAATTATGAAAGATTGTGG................................................................................2130.33100010
..................................................GTCCTGCTGTAGCTCGTCCAG....................................................................................................................................................................................2160.33201010
............................................................................................................AGGACGTCCAGTTGTAATTGATA........................................................................................................................2340.25101000
...........................................................................................................................AATTGATAATGCAAAGGGTAAGTT........................................................................................................2440.25101000
..............................................................................................................................TGATAATGCAAAGGGTAAGTTTACA....................................................................................................2540.25100010
..........................................................................................................................TAATTGATAATGCAAAGGGTA............................................................................................................2140.25101000
.....................................................................................................................................GCAAAGGGTAAGTTTACTTAAAT...............................................................................................2340.25101000
..........................................................................................................................TAATTGATAATGCAAAGGGTAAG..........................................................................................................2340.25101000
.....................................................................................................CTGGTGTAGGACGTCCAGTTG.................................................................................................................................2140.25101000
.........................................................................................................................GTAATTGATAATGCAAAGGGTAAG..........................................................................................................2440.25101000
......................................................................................................TGGTGTAGGACGTCCAGTTG.................................................................................................................................2040.25101000
............................................................................................................AGGACGTCCAGTTGTAATTGATAATG.....................................................................................................................2640.25101000
..................................................................................................GACCTGGTGTAGGACGTCCAG....................................................................................................................................2140.25100010
................................................................................................................................ATAATGCAAAGGGTAAGTT........................................................................................................1940.25101000
................................................................................................................................ATAATGCAAAGGGTAAGTTTACT....................................................................................................2340.25101000
.................................................................................................CGACCTGGTGTAGGACGTCCA.....................................................................................................................................2140.25101000
......................................................................................................TGGTGTAGGACGTCCAGTTGTAAT.............................................................................................................................2440.25100010
..............................................................................................................................................................................................................AAGGCAGTAGCTAAGCCAGCA........................2140.25101000
......................................................................................................TGGTGTAGGACGTCCAGTTGTAATTGA..........................................................................................................................2740.25100010
............................................................................................................................ATTGATAATGCAAAGGGTA............................................................................................................1940.25101000
...........................................................................................................TAGGACGTCCAGTTGTAATTGATAA.......................................................................................................................2540.25100010
.........................................................................................................................GTAATTGATAATGCAAAGGGTAAGTT........................................................................................................2640.25100010
......................................................................................................TGGTGTAGGACGTCCAGTTGTAATTG...........................................................................................................................2640.25100010
........................................................................................................................TGTAATTGATAATGCAAAGGGTAAGT.........................................................................................................2640.25101000
............................................................................................................AGGACGTCCAGTTGTAATTGATAAT......................................................................................................................2540.25101000
............................................................................................................................................................................................................AGAAGGCAGTAGCTAAGCCAG..........................2140.25101000
.....................TGGCGTTCCTGCTCGTCCCAGTGTATC...........................................................................................................................................................................................................2750.20101000
..................................CGTCCCAGTGTATCTCGTCCT....................................................................................................................................................................................................2150.20101000
...........................TCCTGCTCGTCCCAGTGTATCTCGTCCA....................................................................................................................................................................................................2850.20100010
............................................TATCTCGTCCTGCTGTAGCTCG.........................................................................................................................................................................................2250.20101000
...........................................GTATCTCGTCCTGCTGTAGCTCGTC.......................................................................................................................................................................................2550.20100010
..............................TGCTCGTCCCAGTGTATCTCGTCCTGC..................................................................................................................................................................................................2750.20101000
.........................................................................................ACGTGGCTCGACCTGGTGTAGGT...........................................................................................................................................2350.20100010
...........................TCCTGCTCGTCCCAGTGTATCTCGTCCT....................................................................................................................................................................................................2850.20101000
..............................................TCTCGTCCTGCTGTAGCTCGTCCAGT...................................................................................................................................................................................2650.20101000
.......................................................................................TAACGTGGCTCGACCTGGTGTAGGA...........................................................................................................................................2550.20100010
.......................................CAGTGTATCTCGTCCTGCTGTAGC............................................................................................................................................................................................2450.20100010
..........................TTCCTGCTCGTCCCAGTGTATCTCGTC......................................................................................................................................................................................................2750.20101000
........................CGTTCCTGCTCGTCCCAGTGTT.............................................................................................................................................................................................................2250.20100010
.......................................................................................TAACGTGGCTCGACCTGGTGTAG.............................................................................................................................................2350.20100010
.............................................ATCTCGTCCTGCTGTAGCTCG.........................................................................................................................................................................................2150.20101000
......................................................................................TTAACGTGGCTCGACCTGGTGTAGG............................................................................................................................................2550.20101000
.....................................CCCAGTGTATCTCGTCCTGCTGTAGC............................................................................................................................................................................................2650.20101000
.............................CTGCTCGTCCCAGTGTATCTCG........................................................................................................................................................................................................2250.20101000
.........AGCTAATTTACTTGGCGTTCCTGCTCG.......................................................................................................................................................................................................................2750.20101000
.....................................CCCAGTGTATCTCGTCCTGCTG................................................................................................................................................................................................2250.20101000
....................................TCCCAGTGTATCTCGTCCTGCTGTAG.............................................................................................................................................................................................2650.20101000
..........................................TGTATCTCGTCCTGCTGTAGCTCGTC.......................................................................................................................................................................................2650.20101000
...................................................TCCTGCTGTAGCTCGTCCAG....................................................................................................................................................................................2060.17110000
...................................................TCCTGCTGTAGCTCGTCCAGTT..................................................................................................................................................................................2260.17101000
dp5
CC----------------------------------------------------------------------------------------------CC---------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CC----------------------------------------------------------------------------------------------CC---------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droKik1
AC----------------------------------------------------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------------------------CTAGCACCACTAGCACCACTSizeHit CountTotal NormTotal
No Reads
droRho1
T------------------------------------------------------GGTGCAGCTGGTCCAGGTGGTGCAGCTCCCCCTGTCGTCGCTC---------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 04:12 AM