ID:

dwi_2308

 Coordinate:

scf2_1100000004852:2062-2212 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.1 -5.6 -5.6

Flybase annnotation

exon [dwil_GLEANR_19475:1]; CDS [Dwil\GK18786-cds]; intron [Dwil\GK18786-in]

No Repeatable elements found

mature
  1. scf2_1100000005888:150-177 +
  2. scf2_1100000012862:1337-1364 +
  3. scf2_1100000004536:54200-54227 +
  4. scf2_1100000004721:90070-90097 +
  5. dwi_2308  scf2_1100000004852:2110-2137 +
  6. scf2_1100000004865:62068-62095 +
  7. scf2_1100000004888:1071150-1071177 +
  8. scf2_1100000004943:135240-135267 +
  9. scf2_1100000004943:138954-138981 +
  10. scf2_1100000004947:31171-31198 +
  11. scf2_1100000004947:1026414-1026441 +
  12. scf2_1100000004947:1068415-1068442 +
  13. scf2_1100000004907:22442-22469 +
  14. scf2_1100000004953:416698-416725 +
  15. scf2_1100000004961:1820499-1820526 +
  16. scf2_1100000004961:3936243-3936270 +
  17. scf2_1100000004967:4368282-4368309 +
  18. scf2_1100000004968:760451-760478 +
  19. scf2_1100000004968:884897-884924 +
  20. scf2_1100000004968:3387854-3387881 +
  21. scf2_1100000012857:517-544 +
  22. scf2_1100000004832:227827-227854 +
  23. scf2_1100000004832:286914-286941 +
  24. scf2_1100000004958:2188477-2188504 +
  25. scf2_1100000004967:2338431-2338458 +
  26. scf2_1100000004968:429268-429295 +
star
  1. scf2_1100000002875:9476-9502 +
  2. scf2_1100000012862:1371-1397 +
  3. scf2_1100000004431:9783-9809 +
  4. scf2_1100000004591:38914-38940 +
  5. scf2_1100000004638:16571-16597 +
  6. scf2_1100000004750:15208-15234 +
  7. dwi_2308  scf2_1100000004852:2144-2170 +
  8. scf2_1100000004947:387961-387987 +
  9. scf2_1100000004947:1068449-1068475 +
  10. scf2_1100000004901:85285-85311 +
  11. scf2_1100000004909:8006577-8006603 +
  12. scf2_1100000004954:583083-583109 +
  13. scf2_1100000004954:653711-653737 +
  14. scf2_1100000004956:903266-903292 +
  15. scf2_1100000004958:843192-843218 +
  16. scf2_1100000004961:3936277-3936303 +
  17. scf2_1100000004965:472927-472953 +
  18. scf2_1100000004967:1637021-1637047 +
  19. scf2_1100000004967:3598533-3598559 +
  20. scf2_1100000004967:3982533-3982559 +
  21. scf2_1100000001421:2239-2265 +
  22. scf2_1100000001421:10915-10941 +
  23. scf2_1100000004379:2426-2452 +
  24. scf2_1100000004852:323231-323257 +
  25. scf2_1100000004947:189421-189447 +
  26. scf2_1100000012336:466-492 +
  27. scf2_1100000004909:301260-301286 +
  28. scf2_1100000004936:1283568-1283594 +
  29. dwi_3818  scf2_1100000004958:170660-170686 +
  30. scf2_1100000004958:2122101-2122127 +
  31. scf2_1100000004961:3994116-3994142 +
  32. scf2_1100000004967:668092-668118 +
  33. scf2_1100000004967:1579562-1579588 +
  34. scf2_1100000004967:2055090-2055116 +
  35. scf2_1100000004967:2170628-2170654 +
  36. scf2_1100000004967:3207889-3207915 +
  37. scf2_1100000004967:3479080-3479106 +
  38. scf2_1100000004968:1549420-1549446 +
  39. scf2_1100000004968:2541918-2541944 +
  40. scf2_1100000000487:3474-3500 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTCTGAATTACTACAAACAAAACAGTGAGGAACACTCTTCCGATCCGGTGGTCAACAATGCCCTTATGTATCTTAGAAAAATTCTAAATGACTCTGACCACCTTCTGAGAAATTGCACAAGAAATGTACCCTTGAGTTGCCTCGTAAGCAGTCGCCAGCTCTCTCTATTACTTCCTCTCCGATTTTACTTTCGCCTACACCATCTTCTTGTCCCTCTTTATGCTCTTCTTTTCAGATTGAAGTACCCATTA
**************************************************************************************************...(((.((((.....((.((((.........)))).))...)))).)))...........******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
........................................................................................................................................................................................................................TTTATGCTCTTCTTTTCAGATTGAAG......... 26 0 20 1.25 25 14 11 0 0
.TCTGAATTACTACAAACAAAACAGTGAG.............................................................................................................................................................................................................................. 28 0 3 0.67 2 0 0 2 0
..................................................................................................CACCTTCTGAGAAATTGCACAAGAAATG............................................................................................................................. 28 0 20 0.50 10 8 2 0 0
....................................................................................................................................TGAGTTGCCTCGTAAGCAGTCGCCAGC............................................................................................ 27 0 20 0.35 7 7 0 0 0
.........................................................................................................................................................................................TACTTTCGCCTACACCATCTTCTTGT........................................ 26 0 20 0.35 7 6 1 0 0
.........................................................................................................................................TGCCTCGTAAGCAGTCGCCAG............................................................................................. 21 0 20 0.35 7 7 0 0 0
.......TTACTACAAACAAAACAGTGAGGAACAC........................................................................................................................................................................................................................ 28 0 3 0.33 1 1 0 0 0
.........................................................................................................................................TGCCTCGTAAGCAGTCGCCAGCTCTCTC...................................................................................... 28 0 20 0.25 5 5 0 0 0
.........................................................................................................TGAGAAATTGCACAAGAAATGTACCCT....................................................................................................................... 27 0 20 0.25 5 2 3 0 0
.........................................................................................................................................TGCCTCGTAAGCAGTCGCCAGCT........................................................................................... 23 0 20 0.20 4 0 4 0 0
...................................................................................................................................................................................................................CCCTCTTTATGCTCTTCTTTTCAGA............... 25 0 20 0.20 4 4 0 0 0
...............................................................................................................................................................TCTCTCTATTACTTCCTCTCCGATTT.................................................................. 26 0 20 0.20 4 4 0 0 0
..........................................................................................................................................................................................................................TATGCTCTTCTTTTCAGATTGAAG......... 24 0 20 0.20 4 4 0 0 0
..............................................................................................................................TACCCTTGAGTTGCCTCGTAAGCAG.................................................................................................... 25 0 20 0.20 4 0 4 0 0
..............................................................................................................................TACCCTTGAGTTGCCTCGTAAGCA..................................................................................................... 24 0 20 0.15 3 1 2 0 0
............................................................................................................................................CTCGTAAGCAGTCGCCAGCTC.......................................................................................... 21 0 20 0.10 2 2 0 0 0
.........................................................................................................................................TGCCTCGTAAGCAGTCGCCAGC............................................................................................ 22 0 20 0.10 2 2 0 0 0
........................................................................................................................................TTGCCTCGTAAGCAGTCGCCAGCT........................................................................................... 24 0 20 0.10 2 2 0 0 0
.......................................................................................................................................................TCGCCAGCTCTCTCTATTACTTCCTC.......................................................................... 26 0 20 0.10 2 2 0 0 0
.....................................................................................................................................................................TATTACTTCCTCTCCGATTTTACT.............................................................. 24 0 20 0.10 2 2 0 0 0
....................................................................................................................................................................................................................................TTTTCAGATTGAAGTACCC.... 19 0 20 0.10 2 0 0 2 0
.......................................................................................................................................................................................TTTACTTTCGCCTACACCATCTTCT........................................... 25 0 20 0.10 2 2 0 0 0
.................................................................................................................................................................................TCCGATTTTACTTTCGCCTACACCATC............................................... 27 0 20 0.10 2 2 0 0 0
.................................................................................................................................................................................TCCGATTTTACTTTCGCCTACAC................................................... 23 0 20 0.10 2 2 0 0 0
...........................................................................................................................................................................................CTTTCGCCTACACCATCTTCTTGTCC...................................... 26 0 20 0.10 2 2 0 0 0
.......................................................................................................TCTGAGAAATTGCACAAGAAATGTACCC........................................................................................................................ 28 0 20 0.10 2 2 0 0 0
...................................................................................................................................................................................................TACACCATCTTCTTGTCCCTCTT................................. 23 0 20 0.10 2 2 0 0 0
............................................................................................................................................CTCGTAAGCAGTCGCCAGCTCT......................................................................................... 22 0 20 0.10 2 0 2 0 0
......................................................................................................................................................................................................................TCTTTATGCTCTTCTTTTCAGAT.............. 23 0 20 0.10 2 2 0 0 0
........................................................................................................................................TTGCCTCGTAAGCAGTCGCCAGCTCT......................................................................................... 26 0 20 0.10 2 1 1 0 0
.......................................................................................................................................................TCGCCAGCTCTCTCTATTACT............................................................................... 21 0 20 0.05 1 1 0 0 0
..............................................................................................................................TACCCTTGAGTTGCCTCGTAAGCAGT................................................................................................... 26 0 20 0.05 1 0 0 0 1
.......................................................................................................................................................................TTACTTCCTCTGCGATTTTACC.............................................................. 22 2 20 0.05 1 1 0 0 0
.................................................................................................CCACCTTCTGAGAAATTGCACAAGA................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
............................................................................................................................................................................................................TTCTTGTCCCTCTCTATGCTCTTCT...................... 25 1 20 0.05 1 0 1 0 0
.....................................................................................................................................................................................................................CTCTTTATGCTCTTCTTTTCAGA............... 23 0 20 0.05 1 1 0 0 0
......................................................................................................................................AGTTGCCTCGTAAGCAGTCGCCAGCTC.......................................................................................... 27 0 20 0.05 1 1 0 0 0
...............................................................................................................................................GTAAGCAGTCGCCAGCTCTCTCTATTA................................................................................. 27 0 20 0.05 1 1 0 0 0
..............................................................................................................................................CGTAAGCAGTCGCCAGCTCTCTCT..................................................................................... 24 0 20 0.05 1 1 0 0 0
............................................................................................................................TGTACCCTTGAGTTGCCTCGTAAG....................................................................................................... 24 0 20 0.05 1 0 1 0 0
.................................................................................................................................................................................................................................TTCTTTTCAGATTGAAGTACCCAT.. 24 0 20 0.05 1 0 1 0 0
......................................................................................................................................................GTCGCCAGCTCTCTCTATTACT............................................................................... 22 0 20 0.05 1 1 0 0 0
..............................................................................................................................................CGTAAGCAGTCGCCAGCT........................................................................................... 18 0 20 0.05 1 0 1 0 0
.......................................................................................................TCTGAGAAATTGAACAAGAAATGTACCCT....................................................................................................................... 29 1 20 0.05 1 0 0 1 0
..............................................................................................................................................CGTAAGCAGTCGCCAGCTCTCTCTAT................................................................................... 26 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................TTCCTCTCCGATTTTACTTTCGCCTAC..................................................... 27 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................................CGATTTTACTTTCGCTTACACCATCT.............................................. 26 1 20 0.05 1 1 0 0 0
..........................................................................................................................................................CCAGCTCTCTCTATTACTTCCTCTCCGA..................................................................... 28 0 20 0.05 1 1 0 0 0
..................................................................................................................................................AGCAGTCGCCAGCTCTCTCTATTACT............................................................................... 26 0 20 0.05 1 1 0 0 0
.................................................................................................................................CCTTGAGTTGCCTCGTAAGC...................................................................................................... 20 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................TCTCTATTACTTCCTCTCCGATT................................................................... 23 0 20 0.05 1 0 1 0 0
.............................................................................................................................................................GCTCTCTCTATTACTTCCTCTCCG...................................................................... 24 0 20 0.05 1 1 0 0 0
..........................................................................................................................AATGTACCCTTGAGTTGCCTCG........................................................................................................... 22 0 20 0.05 1 1 0 0 0
............................................................................................................................................CTCGTAAGCAGTCGCCAGCTCTC........................................................................................ 23 0 20 0.05 1 0 1 0 0
.................................................................................................................................................................TCTCTATTACTTCCTCTCCGATTTTA................................................................ 26 0 20 0.05 1 1 0 0 0
........................................................................................................................................................................TACTTCCTCTCCGATTTTACTTTCG.......................................................... 25 0 20 0.05 1 1 0 0 0
.............................................................................................................................GTACCCTTGAGTTGCCTCGT.......................................................................................................... 20 0 20 0.05 1 0 0 0 1
................................................................................................................................................................CTCTCTATTACTTCCTCTCCG...................................................................... 21 0 20 0.05 1 1 0 0 0
..................................................................................................CACCTTCTGAGAAATTGCACAA................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................TCTCCGATTTTACTTTCGCC........................................................ 20 0 20 0.05 1 1 0 0 0
........................................................................................................................................................................................TTACTTTCGCCTACACCATCTTC............................................ 23 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................TTACTTCCTCTCCGATTTTACTTTCGC......................................................... 27 0 20 0.05 1 1 0 0 0
............................................................................................................................................CTCGTAAGCAGTCGCCAGCTCTCTC...................................................................................... 25 0 20 0.05 1 0 1 0 0
......................................................................................................................................................................................................ACCATCTTCTTGTCCCTCTTTATGCT........................... 26 0 20 0.05 1 1 0 0 0
...............................................................................................................ATTGCACAAGAAATGTACCCTTGAGT.................................................................................................................. 26 0 20 0.05 1 1 0 0 0
............................................................................................................................................................AGCTCTCTCTATTACTTCCTCTCCGAT.................................................................... 27 0 20 0.05 1 1 0 0 0
..........................................................................................................GAAAAATTGCACAAGAAATGTACCCT....................................................................................................................... 26 1 20 0.05 1 1 0 0 0
................................................................................................................................CCCTTGAGTTGCCTCGTAAGCAGTCGC................................................................................................ 27 0 20 0.05 1 1 0 0 0
......................................................................................................................................................GTCGCCAGCTCTCTCTATTACTTCCT........................................................................... 26 0 20 0.05 1 1 0 0 0
...................................................................................................................CACAAGAAATGTACCCTTGAGTTGCC.............................................................................................................. 26 0 20 0.05 1 1 0 0 0
........................................................................................................................................................CGCCAGCTCTCTCTATTACTTCCTC.......................................................................... 25 0 20 0.05 1 0 1 0 0
............................................................................................................................................................................TCCTCTCCGATTTTACTTTCGCCT....................................................... 24 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................CTTGTCCCTCTTTATGCTCTT........................ 21 0 20 0.05 1 1 0 0 0
................................................................................................................................................TAAGCAGTCGCCAGCTCTCTCTATTACTT.............................................................................. 29 0 20 0.05 1 1 0 0 0
..........................................................................................................................................GCCTCGTAAGCAGTCGCCAGC............................................................................................ 21 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................ACTTCCTCTCCGATTTTACTTTCGCC........................................................ 26 0 20 0.05 1 1 0 0 0
.......................................................................................................................AGAAATGTACCCTTGAGTTGC............................................................................................................... 21 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

AAGACTTAATGATGTTTGTTTTGTCACTCCTTGTGAGAAGGCTAGGCCACCAGTTGTTACGGGAATACATAGAATCTTTTTAAGATTTACTGAGACTGGTGGAAGACTCTTTAACGTGTTCTTTACATGGGAACTCAACGGAGCATTCGTCAGCGGTCGAGAGAGATAATGAAGGAGAGGCTAAAATGAAAGCGGATGTGGTAGAAGAACAGGGAGAAATACGAGAAGAAAAGTCTAACTTCATGGGTAAT
********************************************************************************************...(((.((((.....((.((((.........)))).))...)))).)))...........************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
......................................................TGTTACGGGAATACATAGAATCT.............................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
............................................................................................AGACTGATGGAAGACTCAT............................................................................................................................................ 19 2 1 1.00 1 1 0 0 0
.......................................................................................................................................CAACGGAGCATTCGTCAGCGGTCGA........................................................................................... 25 0 20 0.25 5 0 5 0 0
...................................................................................................................................................................................GCTAAAATGAAAGCGGATGTGGT................................................. 23 0 20 0.25 5 0 5 0 0
..................................................................................................................................................TCGTCAGCGGTCGAGAGAGATAAT................................................................................. 24 0 20 0.25 5 5 0 0 0
.............................CTTGTGAGGGGGCTAGGCCG.......................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 1 0
..................................................................................................................................................................................GGCTAAAATGAAAGCGGATGTGGTAG............................................... 26 0 20 0.15 3 0 3 0 0
................................................................................................................................................................GAGAGATAATGAAGGAGAGGCTAAAAT................................................................ 27 0 20 0.15 3 3 0 0 0
.......................................................................................................................................................................AATGAAGGAGAGGCTAAAATGAAAG........................................................... 25 0 20 0.15 3 0 3 0 0
........................................................................................................................................................................ATGAAGGAGAGGCTAAAATGAAAGC.......................................................... 25 0 20 0.15 3 0 3 0 0
.....................................................................................................................................................TCAGCGGTCGAGAGAGATAAT................................................................................. 21 0 20 0.10 2 0 2 0 0
....................................................................................................GGAAGACTCTTTAACGTGTTCTTTACAT........................................................................................................................... 28 0 20 0.10 2 2 0 0 0
.................................................................................................GGTGGAAGACTCTTTAACGTGTTCT................................................................................................................................. 25 0 20 0.10 2 0 2 0 0
........................................................................................................................................................................ATGAAGGAGAGGCTAAAATGAAAGCGG........................................................ 27 0 20 0.10 2 2 0 0 0
...................................................................................................................................................................AGATAATGAAGGAGAGGCTAAAATGA.............................................................. 26 0 20 0.10 2 0 2 0 0
................................................................................................TCGTGGAGGACTCTTTGAC........................................................................................................................................ 19 3 12 0.08 1 0 0 0 1
...................................................................................................................................................CGTCAGCGGTCGAGAGAGATAAT................................................................................. 23 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................AGATAATAAAGGAGAGGCTAAAAT................................................................ 24 1 20 0.05 1 0 1 0 0
........................................................................................................................................................................ATGAAGGAGAGGCTAAAATGAAAG........................................................... 24 0 20 0.05 1 0 1 0 0
............................................................................................................................ACATGGGAACTCAACGGAGCATTCGT..................................................................................................... 26 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................................GAAGAAAAGTCTAACTTCATGGGT... 24 0 20 0.05 1 0 1 0 0
................................................................................................................................................................................GAGGCTAAAATGAAAGCGGATGTGGT................................................. 26 0 20 0.05 1 1 0 0 0
..........................................................................................................................................................................................................AGAAGAACAGGGAGAAATACGAGAA........................ 25 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................AGATAATGAAGGCGAGGCTAAAAT................................................................ 24 1 20 0.05 1 0 1 0 0
..........................................................................................................................TTACATGGGAACTCAACGGAGCATTC....................................................................................................... 26 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................AGAGATAATGAAGGAGAGTCTAAAAT................................................................ 26 1 20 0.05 1 1 0 0 0
..............................................................................................................................................................................GAGGTGCTAAAACGAAAGCG......................................................... 20 3 20 0.05 1 0 1 0 0
......................................................................................................................................................................TAATGAAGGAGAGGCTAAAATGAAA............................................................ 25 0 20 0.05 1 0 0 0 1
....................................................................................................................................................................................CTAAAATGAAAGCGGATGTGGTAGAAGA........................................... 28 0 20 0.05 1 0 0 1 0
............................................................................................................................................................................AGGAGAGGCTAAAATGAAAGCGGATGT.................................................... 27 0 20 0.05 1 1 0 0 0
...........................................................................................................................TACATGGGAACTCAACGGAGC........................................................................................................... 21 0 20 0.05 1 1 0 0 0
..................................................................................................................................................TCGTCAGCGGTCGAGAGAGATAATG................................................................................ 25 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................AGGTAATGAAGGAGAGGCTAAAAT................................................................ 24 1 20 0.05 1 0 1 0 0
.................................................................................................................................................................AGAGATAATGAAGCAGAGGCTAAAAT................................................................ 26 1 20 0.05 1 0 1 0 0
...................................................................................................................................................................AGATAATGAAGTAGAGGCTAAAAT................................................................ 24 1 20 0.05 1 0 1 0 0
.......................................................................................................AGACTCTTTAACGTGTTCTTTACAT........................................................................................................................... 25 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................GGCTAAAATGAAAGCGGATGTGGT................................................. 24 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................GGGTAGAAGAACAGGGAGAAAT............................... 22 1 20 0.05 1 0 1 0 0
........................................................................................................................TTTTACATGGGAACTCAACGGAGCATT........................................................................................................ 27 1 20 0.05 1 1 0 0 0
........................................................................................................................CTTTACATGGGAACTCAACGGAGCAT......................................................................................................... 26 0 20 0.05 1 1 0 0 0
...................................................................................................TGGAAGACTCTTTAGCGTGTT................................................................................................................................... 21 1 20 0.05 1 0 1 0 0
...................................................................................................................................................................................................................GGGAGAAATACGAGAAGAAA.................... 20 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................GAGAGGCTAAAATGAAAGCGGATGT.................................................... 25 0 20 0.05 1 0 1 0 0
..................................................................................................................................................................GAGATAATGAATGAGAGGCTAAAAT................................................................ 25 1 20 0.05 1 1 0 0 0
........................................................................................................................................................GCGGTCGAGAGAGATAATGAAGG............................................................................ 23 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................ATGTGGTACAAGAACAGGGAGAAAT............................... 25 1 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004852:2012-2262 + dwi_2308 TTCTGAATTACTACAAACAAAACAGTGAGGAACACTCTTCCGATCCGGTGGTCAACAATGCCCTTATGTATCTTAGAAAAATTCTAAATGACTCTGACCACCTTCTGAGAAATTGCACAAGAAATGTACCCTTGAGTTGCCTCGTAAGCAGTCGCCAGCTCTCTCTATTACTTCCTCTCCGATTTTACTTTCGCCTACACCATCTTCTTGTCCCTCTTTATGCTCTTCTTTTCAGATTGAAGTACCCATTA
droVir3 scaffold_13047:17006000-17006093 - TTCTGAGCCACTACAGACAAAACAGCGAGGAACGAACCTACGATGCTGTAGTTACCAATGCACTAATGTATCTCGGCAAGATACTTAACGACTC-------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:25987523-25987616 - TACTGAGCTACTATCGGCAAAATAGTGAGGAGAGAACCAGCGATGCGGTTGTCACAAATGCACTCATGTATCTTGGCAAGATTCTCAACGACTC-------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:3467615-3467708 - TATTGAACTATTACCGACAGAACAGCGAGGAACGCACCTGCGATGCTGTGGTGACCAATGCACTCATGTTTCTGGGCAAGATACTCAATGACTC-------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:27207125-27207220 + TACTCACATACTACAAGCAAAACAGCGAGGAATACACCTGTGATGCGGTGGTCACGAATGCTCTGATGTATCTGGGAAAGATTCTCAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_6:2498150-2498245 + TACTCACATACTACAAGCAAAACAGCGAGGAATACACCTGCGATGCGGTGGTCACGAATGCTCTGATGTATCTGGGAAAGATTCTCAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:10970030-10970125 + TTCTCAGCTACTACAAGCAAAACAGCGAGGAGTATACCTGCGATGCTGTGGTCACCAACGCCTTGATGTACATAGGAAAGATTCTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396374:111047-111142 - TTCTCAGTTACTATAAACAAAATAGCGAGGAATACACCTGCGATGCTGTTGTAACAAATGCGTTGATGTATATAGGAAAGATTCTAAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302247:341689-341784 - TCCTTAGTTACTACAAACAGAACAGTGAGGAGTACACCAGCGATGCTGTGGTCACGAACGCCTTAATGTACCTCGGCAAGATCCTAAACGACTCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454106:2610643-2610738 - TTCTTAGTTTCTACAAACAGAATAGTGAGGAATACACCTGCGATGCTGTGGTCACGAACGCCCTTATGTATCTCGGGAAGATTTTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491212:1248121-1248216 - TTCTCAGTTTTTACAAACAAAACAGCGAGGAATATACCTGCGATGCTGTGGTAACAAACGCATTGATGTATCTCGGAAAGATTTTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000762477:55182-55277 + TTCTTAGTTTCTATAAACAGAATAGCGAGGAATATACTTGTGATGCTGTGGTTACAAACGCGTTGATGTATCTCGGCAAGATTTTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302402:7266698-7266793 + TCCTCAGTTTCTACAAACAGAATAGTGAGGAATATACTTGCGACGCTGTCGTGACGAACGCCTTGATGTATCTCGGAAAGATTTTAAACGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414009:286684-286779 - TTCTCAATTTCTACAAACAGAATAGCGAGGAATATACTTGCGACGCTGTCGTCACCAACGCCCTAATGTATCTCGGAAAGATTTTGAACGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409490:165854-165949 - TTCTCAGTTTTTATAAACAGAATAGTGATGAATATACTTGCGACGCTGTGGTCACGAATGCATTGATGTATCTCGGAAAGATTTTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:4559981-4560074 + TTCTCAGTTTCTACAAACAGAATAGTGACGAATATACTTGCGACGCTGTGGTAACAAACGCATTGATGTATCTCGGGAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:16432276-16432369 - TTCTCAGTTTCTACAAACAGAACAGCGAGGAATATACCTGCGACGCTGTAGTGACAAACGCATTGATGTATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_0:17296688-17296781 - TTCTCAGTTTCTATAAACAGAACAGCGAGGAATATACCTGCGACGCTGTAGTGACAAACGCATTGATGTATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3R:8620975-8621068 + TTCTCAGTTTCTACAAACAGAATAGCGAGCAATATACCTGCGACGCCGTGGTAACGAACGCATTGATGTATCTCGGAAAGATCCTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:17026621-17026714 - TTCTCAGTTTCTACAAACAGAATAGCGAGCATTATACCTGCGACGCCGTGGTAACGAACGCATTGATGTATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TTCTGAATTACTACAAACAAAACAGTGAGGAACACTCTTCCGATCCGGTGGTCAACAATGCCCTTATGTATCTTAGAAAAATTCTAAATGACTCTGACCACCTTCTGAGAAATTGCACAAGAAATGTACCCTTGAGTTGCCTCGTAAGCAGTCGCCAGCTCTCTCTATTACTTCCTCTCCGATTTTACTTTCGCCTACACCATCTTCTTGTCCCTCTTTATGCTCTTCTTTTCAGATTGAAGTACCCATTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................TTTATGCTCTTCTTTTCAGATTGAAG.........26201.25250140110
.TCTGAATTACTACAAACAAAACAGTGAG..............................................................................................................................................................................................................................2830.67220000
..................................................................................................CACCTTCTGAGAAATTGCACAAGAAATG.............................................................................................................................28200.501008020
....................................................................................................................................TGAGTTGCCTCGTAAGCAGTCGCCAGC............................................................................................27200.35707000
.........................................................................................................................................................................................TACTTTCGCCTACACCATCTTCTTGT........................................26200.35706010
.........................................................................................................................................TGCCTCGTAAGCAGTCGCCAG.............................................................................................21200.35707000
.......TTACTACAAACAAAACAGTGAGGAACAC........................................................................................................................................................................................................................2830.33101000
.........................................................................................................................................TGCCTCGTAAGCAGTCGCCAGCTCTCTC......................................................................................28200.25505000
.........................................................................................................TGAGAAATTGCACAAGAAATGTACCCT.......................................................................................................................27200.25502030
.........................................................................................................................................TGCCTCGTAAGCAGTCGCCAGCT...........................................................................................23200.20400040
...................................................................................................................................................................................................................CCCTCTTTATGCTCTTCTTTTCAGA...............25200.20404000
...............................................................................................................................................................TCTCTCTATTACTTCCTCTCCGATTT..................................................................26200.20404000
..........................................................................................................................................................................................................................TATGCTCTTCTTTTCAGATTGAAG.........24200.20404000
..............................................................................................................................TACCCTTGAGTTGCCTCGTAAGCAG....................................................................................................25200.20400040
..............................................................................................................................TACCCTTGAGTTGCCTCGTAAGCA.....................................................................................................24200.15301020
............................................................................................................................................CTCGTAAGCAGTCGCCAGCTC..........................................................................................21200.10202000
.........................................................................................................................................TGCCTCGTAAGCAGTCGCCAGC............................................................................................22200.10202000
........................................................................................................................................TTGCCTCGTAAGCAGTCGCCAGCT...........................................................................................24200.10202000
.......................................................................................................................................................TCGCCAGCTCTCTCTATTACTTCCTC..........................................................................26200.10202000
.....................................................................................................................................................................TATTACTTCCTCTCCGATTTTACT..............................................................24200.10202000
....................................................................................................................................................................................................................................TTTTCAGATTGAAGTACCC....19200.10220000
.......................................................................................................................................................................................TTTACTTTCGCCTACACCATCTTCT...........................................25200.10202000
.................................................................................................................................................................................TCCGATTTTACTTTCGCCTACACCATC...............................................27200.10202000
.................................................................................................................................................................................TCCGATTTTACTTTCGCCTACAC...................................................23200.10202000
...........................................................................................................................................................................................CTTTCGCCTACACCATCTTCTTGTCC......................................26200.10202000
.......................................................................................................TCTGAGAAATTGCACAAGAAATGTACCC........................................................................................................................28200.10202000
...................................................................................................................................................................................................TACACCATCTTCTTGTCCCTCTT.................................23200.10202000
............................................................................................................................................CTCGTAAGCAGTCGCCAGCTCT.........................................................................................22200.10200020
......................................................................................................................................................................................................................TCTTTATGCTCTTCTTTTCAGAT..............23200.10202000
........................................................................................................................................TTGCCTCGTAAGCAGTCGCCAGCTCT.........................................................................................26200.10201010
.......................................................................................................................................................TCGCCAGCTCTCTCTATTACT...............................................................................21200.05101000
..............................................................................................................................TACCCTTGAGTTGCCTCGTAAGCAGT...................................................................................................26200.05100100
.................................................................................................CCACCTTCTGAGAAATTGCACAAGA.................................................................................................................................25200.05101000
.....................................................................................................................................................................................................................CTCTTTATGCTCTTCTTTTCAGA...............23200.05101000
......................................................................................................................................AGTTGCCTCGTAAGCAGTCGCCAGCTC..........................................................................................27200.05101000
...............................................................................................................................................GTAAGCAGTCGCCAGCTCTCTCTATTA.................................................................................27200.05101000
..............................................................................................................................................CGTAAGCAGTCGCCAGCTCTCTCT.....................................................................................24200.05101000
............................................................................................................................TGTACCCTTGAGTTGCCTCGTAAG.......................................................................................................24200.05100010
.................................................................................................................................................................................................................................TTCTTTTCAGATTGAAGTACCCAT..24200.05100010
......................................................................................................................................................GTCGCCAGCTCTCTCTATTACT...............................................................................22200.05101000
..............................................................................................................................................CGTAAGCAGTCGCCAGCT...........................................................................................18200.05100010
..............................................................................................................................................CGTAAGCAGTCGCCAGCTCTCTCTAT...................................................................................26200.05101000
...........................................................................................................................................................................TTCCTCTCCGATTTTACTTTCGCCTAC.....................................................27200.05101000
..........................................................................................................................................................CCAGCTCTCTCTATTACTTCCTCTCCGA.....................................................................28200.05101000
..................................................................................................................................................AGCAGTCGCCAGCTCTCTCTATTACT...............................................................................26200.05101000
.................................................................................................................................CCTTGAGTTGCCTCGTAAGC......................................................................................................20200.05101000
.................................................................................................................................................................TCTCTATTACTTCCTCTCCGATT...................................................................23200.05100010
.............................................................................................................................................................GCTCTCTCTATTACTTCCTCTCCG......................................................................24200.05101000
..........................................................................................................................AATGTACCCTTGAGTTGCCTCG...........................................................................................................22200.05101000
............................................................................................................................................CTCGTAAGCAGTCGCCAGCTCTC........................................................................................23200.05100010
.................................................................................................................................................................TCTCTATTACTTCCTCTCCGATTTTA................................................................26200.05101000
........................................................................................................................................................................TACTTCCTCTCCGATTTTACTTTCG..........................................................25200.05101000
.............................................................................................................................GTACCCTTGAGTTGCCTCGT..........................................................................................................20200.05100100
................................................................................................................................................................CTCTCTATTACTTCCTCTCCG......................................................................21200.05101000
..................................................................................................CACCTTCTGAGAAATTGCACAA...................................................................................................................................22200.05101000
...............................................................................................................................................................................TCTCCGATTTTACTTTCGCC........................................................20200.05101000
........................................................................................................................................................................................TTACTTTCGCCTACACCATCTTC............................................23200.05101000
.......................................................................................................................................................................TTACTTCCTCTCCGATTTTACTTTCGC.........................................................27200.05101000
............................................................................................................................................CTCGTAAGCAGTCGCCAGCTCTCTC......................................................................................25200.05100010
......................................................................................................................................................................................................ACCATCTTCTTGTCCCTCTTTATGCT...........................26200.05101000
...............................................................................................................ATTGCACAAGAAATGTACCCTTGAGT..................................................................................................................26200.05101000
............................................................................................................................................................AGCTCTCTCTATTACTTCCTCTCCGAT....................................................................27200.05101000
................................................................................................................................CCCTTGAGTTGCCTCGTAAGCAGTCGC................................................................................................27200.05101000
......................................................................................................................................................GTCGCCAGCTCTCTCTATTACTTCCT...........................................................................26200.05101000
...................................................................................................................CACAAGAAATGTACCCTTGAGTTGCC..............................................................................................................26200.05101000
........................................................................................................................................................CGCCAGCTCTCTCTATTACTTCCTC..........................................................................25200.05100010
............................................................................................................................................................................TCCTCTCCGATTTTACTTTCGCCT.......................................................24200.05101000
..............................................................................................................................................................................................................CTTGTCCCTCTTTATGCTCTT........................21200.05101000
................................................................................................................................................TAAGCAGTCGCCAGCTCTCTCTATTACTT..............................................................................29200.05101000
..........................................................................................................................................GCCTCGTAAGCAGTCGCCAGC............................................................................................21200.05101000
.........................................................................................................................................................................ACTTCCTCTCCGATTTTACTTTCGCC........................................................26200.05101000
.......................................................................................................................AGAAATGTACCCTTGAGTTGC...............................................................................................................21200.05100010
droVir3
TTCTGAGCCACTACAGACAAAACAGCGAGGAACGAACCTACGATGCTGTAGTTACCAATGCACTAATGTATCTCGGCAAGATACTTAACGACTC-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........CACTACAGACAAAACAGCGAG..............................................................................................................................................................................................................................2111.001000000000010000000000000000000000000000000000000000000000000000
.........................................................ATGCACTAATGTATCTCGGCAAGATACT......................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000001000
......................................TACGATGCTGTAGTTACCAAT................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
......................................TACGATGCTGTAGTTACCAATA...............................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
TACTGAGCTACTATCGGCAAAATAGTGAGGAGAGAACCAGCGATGCGGTTGTCACAAATGCACTCATGTATCTTGGCAAGATTCTCAACGACTC-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TATTGAACTATTACCGACAGAACAGCGAGGAACGCACCTGCGATGCTGTGGTGACCAATGCACTCATGTTTCTGGGCAAGATACTCAATGACTC-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TACTCACATACTACAAGCAAAACAGCGAGGAATACACCTGTGATGCGGTGGTCACGAATGCTCTGATGTATCTGGGAAAGATTCTCAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TACTCACATACTACAAGCAAAACAGCGAGGAATACACCTGCGATGCGGTGGTCACGAATGCTCTGATGTATCTGGGAAAGATTCTCAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................GAATGCTCTGATGTATCTGG................................................................................................................................................................................2011.001100000
droAna3
TTCTCAGCTACTACAAGCAAAACAGCGAGGAGTATACCTGCGATGCTGTGGTCACCAACGCCTTGATGTACATAGGAAAGATTCTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTCTCAGTTACTATAAACAAAATAGCGAGGAATACACCTGCGATGCTGTTGTAACAAATGCGTTGATGTATATAGGAAAGATTCTAAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCCTTAGTTACTACAAACAGAACAGTGAGGAGTACACCAGCGATGCTGTGGTCACGAACGCCTTAATGTACCTCGGCAAGATCCTAAACGACTCCG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTCTTAGTTTCTACAAACAGAATAGTGAGGAATACACCTGCGATGCTGTGGTCACGAACGCCCTTATGTATCTCGGGAAGATTTTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTCTCAGTTTTTACAAACAAAACAGCGAGGAATATACCTGCGATGCTGTGGTAACAAACGCATTGATGTATCTCGGAAAGATTTTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTCTTAGTTTCTATAAACAGAATAGCGAGGAATATACTTGTGATGCTGTGGTTACAAACGCGTTGATGTATCTCGGCAAGATTTTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCCTCAGTTTCTACAAACAGAATAGTGAGGAATATACTTGCGACGCTGTCGTGACGAACGCCTTGATGTATCTCGGAAAGATTTTAAACGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTCTCAATTTCTACAAACAGAATAGCGAGGAATATACTTGCGACGCTGTCGTCACCAACGCCCTAATGTATCTCGGAAAGATTTTGAACGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TTCTCAGTTTTTATAAACAGAATAGTGATGAATATACTTGCGACGCTGTGGTCACGAATGCATTGATGTATCTCGGAAAGATTTTGAATGATTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TTCTCAGTTTCTACAAACAGAATAGTGACGAATATACTTGCGACGCTGTGGTAACAAACGCATTGATGTATCTCGGGAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................AACAAACGCATTGATGTATCTCGGGAA............................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TATCTCGGGAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000001000000
.........................................................ACGCATTGATGTATCTCGGGAAGATC........................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTGATGTATCTCGGGAAGATCTTGAAC..................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000101000000
.....................................................................ATCTCGGGAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
........................................................AACGCATTGATGTATCTCGGGAAGATC........................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000
......................................TGCGACGCTGTGGTAACAAACGCA.............................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGTATCTCGGGAAGATCTTGAACGAT...............................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................................................AACGCATTGATGTATCTCGGGAAGA..........................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TATCTCGGGAAGATCTTGAACGAT...............................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................TTGATGTATCTCGGGAAGATCT.......................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCAGTTTCTACAAACAGAATAGTGACGA............................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................ATTGATGTATCTCGGGAAGATC........................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................ACGCATTGATGTATCTCGGGA.............................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
................................TATACTTGCGACGCTGTGGTAACAAACG...............................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GACGCTGTGGTAACAAAC................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................ATTGATGTATCTCGGGAAGATCTTGAAC..................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........CTACAAACAGAATAGTGACGAAT..........................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TAGTGACGAATATACTTGCGACGCTGT..........................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGATGTATCTCGGGAAGATCTTGAAC..................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000
...................................ACTTGCGACGCTGTGGTAACAAACGCAT............................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TATCTCGGGAAGATCTTGAACG.................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TTGCGACGCTGTGGTAACAAACGCA.............................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGTGGTAACAAACGCATTGATGTATC...................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGTGGTAACAAACGCATTGATGTATCT..................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGCGACGCTGTGGTAACAAACGCATT...........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGATGTATCTCGGGAAGA..........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GATGTATCTCGGGAAGATC........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTGATGTATCTCGGGAAGATCTT......................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGTGACGAATATACTTGCGACGCTG...........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................ACGCTGTGGTAACAAACG...............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGACGAATATACTTGCGACGCTGTGG........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................CGCATTGATGTATCTCGGGAAGATCT.......................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
TTCTCAGTTTCTACAAACAGAATAG..................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GATGTATCTCGGGAAGATCTTGAA...................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GCATTGATGTATCTCGGGAAGATCTTG.....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................ATTGATGTATCTCGGGAAGATCTT......................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................CATTGATGTATCTCGGGAAGATCT.......................................................................................................................................................................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATACTTGCGACGCTGTGGTAACAAAC................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GATGTATCTCGGGAAGATCTTGAACGAT...............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GATGTATCTCGGGAAGATCTTGAACGA................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACTTGCGACGCTGTGGTAACAAACGC..............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AACGCATTGATGTATCTCGGGAAGATCT.......................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGATGTATCTCGGGAAGATCTTGAACGA................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATACTTGCGACGCTGTGGTAACAAACGC..............................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TACAAACAGAATAGTGACGAATAT........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TACTTGCGACGCTGTGGTAACAAACGCA.............................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CTTGCGACGCTGTGGTAACAAACGCA.............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................ATTGATGTATCTCGGGAAG...........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...................................................TAACAAACGCATTGATGTATCTCGGGAA............................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CGACGCTGTGGTAACAAACGCATT...........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCAGTTTCTACAAACAGAATAGTGACGAA...........................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TATACTTGCGACGCTGTGGTAACA...................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................ATTGATGTATCTCGGGAAGATCTTGAA...................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......TTTCTACAAACAGAATAGTGACGAATA.........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CATTGATGTATCTCGGGAAG...........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................CGCATTGATGTATCTCGGGAAGATCTT......................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................CGAATATACTTGCGACGCTGTGG........................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGTATCTCGGGAAGATCTTGAACGATT..............................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCTCAGTTTCTACAAACAGAATAGTGAC..............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCTACAAACAGAATAGTGACGAATATAC......................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
.................................ATACTTGCGACGCTGTGG........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GACGCTGTGGTAACAAACGCATTGATGTATCTCG................................................................................................................................................................................3411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CTCAGTTTCTACAAACAGAATAGTGACG.............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................ACAAACGCATTGATGTATCTCGGGAAGA..........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................GATGTATCTCGGGAAGATCTTGAAC..................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GACGCTGTGGTAACAAACGCA.............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TTCTCAGTTTCTACAAACAGAATAGT.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................CAAACGCATTGATGTATCTCG................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................TATACTTGCGACGCTGTGGTAACAAAC................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTGATGTATCTCGGGAAGATCTTG.....................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................ACGAATATACTTGCGACGCTG...........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............AAACAGAATAGTGACGAAT..........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GCGACGCTGTGGTAACAAA.................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CATTGATGTATCTCGGGAAGATCTT......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTCTCAGTTTCTACAAACAGAACAGCGAGGAATATACCTGCGACGCTGTAGTGACAAACGCATTGATGTATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................TGCGACGCTGTAGTGACAAACGCAT............................................................................................................................................................................................25120.0020000000000000218000
......................................TGCGACGCTGTAGTGACAAACGCA.............................................................................................................................................................................................2418.00800000010000016000
................................TATACCTGCGACGCTGTAGTGACAAACGCA.............................................................................................................................................................................................3014.00400000022000000000
..........................................................CGCATTGATGTATCTCGGAAAGATCT.......................................................................................................................................................................2614.00400000031000000000
......................................TGCGACGCTGTAGTGACAAACGCATT...........................................................................................................................................................................................2614.00400000000000013000
.........................................GACGCTGTAGTGACAAACGCATTGATG.......................................................................................................................................................................................2713.00300000020000001000
.................................ATACCTGCGACGCTGTAGTGACAAACGCA.............................................................................................................................................................................................2912.00200000002000000000
...............................................................TGATGTATCTCGGAAAGATCTTGAACGAT...............................................................................................................................................................2912.00200000020000000000
.....................................................................ATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------2512.00200100010000000000
......................................TGCGACGCTGTAGTGACAAACGCATA...........................................................................................................................................................................................2612.00200000000000002000
....................................................................TATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------2612.00200000011000000000
..............................................TGTAGTGACAAACGCATTGATGTATC...................................................................................................................................................................................2612.00200000010100000000
..........................................ACGCTGTAGTGACAAACGCATTGATG.......................................................................................................................................................................................2612.00200000010100000000
......................................TGCGACGCTGTAGTGACAAACGCATTGATG.......................................................................................................................................................................................3012.00200000010000001000
................................TATACCTGCGACGCTGTAGTGACAAACGC..............................................................................................................................................................................................2911.00100000001000000000
......................................TGCGACGCTGTAGTGACAAACGCAG............................................................................................................................................................................................2511.00100000000000001000
.................................................AGTGACAAACGCATTGATGTATCTCGGAA.............................................................................................................................................................................2911.00100000010000000000
.........................................GACGCTGTAGTGACAAACGCATTGA.........................................................................................................................................................................................2511.00100000000000001000
.........................................GACGCTGTAGTGACAAACGCATTGAT........................................................................................................................................................................................2611.00100000000000001000
........................GCGAGGAATATACCTGCGACGCT............................................................................................................................................................................................................2311.00101000000000000000
..................................TACCTGCGACGCTGTAGTGACAAACGCAT............................................................................................................................................................................................2911.00100000000000001000
..............................................................TTGATGTATCTCGGAAAGATCTTGAACGATT..............................................................................................................................................................3111.00100000001000000000
..........................................................CGCATTGATGTATCTCGGAAAGATC........................................................................................................................................................................2511.00100000000001000000
....................................CCTGCGACGCTGTAGTGACAAACGCAT............................................................................................................................................................................................2711.00100000000000001000
......................................TGCGACGCTGTAGTGACAAAC................................................................................................................................................................................................2111.00100001000000000000
.......................................................AAACGCATTGATGTATCTCGGAAAGATCT.......................................................................................................................................................................2911.00100000001000000000
..............................................................TTGATGTATCTCGGAAAGATCTTGAA...................................................................................................................................................................2611.00100000001000000000
...............................................................TGATGTATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------3111.00100000010000000000
......................................TGCGACGCTGTAGTGACA...................................................................................................................................................................................................1811.00100000010000000000
...................................................TGACAAACGCATTGATGTATCTCGGA..............................................................................................................................................................................2611.00100000010000000000
........TTCTACAAACAGAACAGCGAGGAA...........................................................................................................................................................................................................................2411.00100000001000000000
..................................TACCTGCGACGCTGTAGTGACAAACG...............................................................................................................................................................................................2611.00100000010000000000
....................................................................TATCTCGGAAAGATCT.......................................................................................................................................................................1611.00100000010000000000
...............................................................TGATGTATCTCGGAAAGATCTTGAACGA................................................................................................................................................................2811.00100000000100000000
...................................................TGACAAACGCATTGATGTATCTCGGAAA............................................................................................................................................................................2811.00100000001000000000
................................................TAGTGACAAACGCATTGATGTATCTCGGA..............................................................................................................................................................................2911.00100000010000000000
.................................................................ATGTATCTCGGAAAGATCTTGAACGAT...............................................................................................................................................................2711.00100000010000000000
..............................................................TTGATGTATCTCGGAAAGATCT.......................................................................................................................................................................2211.00100000010000000000
...............................................................TGATGTATCTCGGAAAGATCTTGAACGATT..............................................................................................................................................................3011.00100000010000000000
................................................................GATGTATCTCGGAAAGATC........................................................................................................................................................................1911.00100000000001000000
.......................................GCGACGCTGTAGTGACCTC.................................................................................................................................................................................................1990.11100000000010000000
droSec2
TTCTCAGTTTCTATAAACAGAACAGCGAGGAATATACCTGCGACGCTGTAGTGACAAACGCATTGATGTATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................ATTGATGTATCTCGGAAAGAT.........................................................................................................................................................................2112.0020110
..........................................................CGCATTGATGTATCTCGGAAAG...........................................................................................................................................................................2211.0010010
...............................................................TGATGTATCTCGGAAAGATCTT......................................................................................................................................................................2211.0010100
droYak3
TTCTCAGTTTCTACAAACAGAATAGCGAGCAATATACCTGCGACGCCGTGGTAACGAACGCATTGATGTATCTCGGAAAGATCCTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................ATTGATGTATCTCGGAAAG...........................................................................................................................................................................1911.00100000010000
droEre2
TTCTCAGTTTCTACAAACAGAATAGCGAGCATTATACCTGCGACGCCGTGGTAACGAACGCATTGATGTATCTCGGAAAGATCTTGAACGATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................ATTGATGTATCTCGGAAAGAT.........................................................................................................................................................................2113.0030000300
..............................ATTATACCTGCGACGCCGTGGTAACGA..................................................................................................................................................................................................2711.0010000100
...................................................TAACGAACGCATTGATGTATCTCGGAAAGAT.........................................................................................................................................................................3111.0010000001
.............................................................ATTGATGTATCTCGGAAAGA..........................................................................................................................................................................2011.0010000100
.....................ATAGCGAGCATTATACCTGCGA................................................................................................................................................................................................................2211.0010000100
..............................ATTATACCTGCGACGCCGTG.........................................................................................................................................................................................................2011.0010000100
.........................................GACGCCGTGGTAACGAACGCATTGATG.......................................................................................................................................................................................2711.0011000000
........TTCTACAAACAGAATAGCGAGCATTA.........................................................................................................................................................................................................................2611.0011000000

Generated: 05/18/2015 at 03:55 AM