ID:

dwi_2296

 Coordinate:

scf2_1100000004850:54671-54821 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.9 -11.4 -11.4

Flybase annnotation

CDS [Dwil\GK16061-cds]; exon [dwil_GLEANR_16410:1]; intron [Dwil\GK16061-in]

Repeatable elements

NameClassFamilyStrand
BEL-1_DWil-I-intLTRPao-
mature
  1. scf2_1100000013165:732-754 -
  2. scf2_1100000003723:615-637 -
  3. scf2_1100000002234:1468-1490 -
  4. scf2_1100000012066:1039-1061 -
  5. scf2_1100000004658:18437-18459 -
  6. scf2_1100000004703:33228-33250 -
  7. scf2_1100000004826:18904-18926 -
  8. scf2_1100000004869:33985-34007 -
  9. scf2_1100000007152:1012-1034 -
  10. scf2_1100000004925:64012-64034 -
  11. scf2_1100000004953:186242-186264 -
  12. scf2_1100000004956:12396-12418 -
  13. scf2_1100000004961:810658-810680 -
  14. scf2_1100000004961:1341083-1341105 -
  15. scf2_1100000004961:4510590-4510612 -
  16. scf2_1100000004966:166584-166606 -
  17. scf2_1100000004968:918448-918470 -
  18. scf2_1100000004968:1587005-1587027 -
  19. scf2_1100000000131:559-581 -
  20. scf2_1100000000217:972-994 -
  21. dwi_281  scf2_1100000003082:3744-3766 +
  22. scf2_1100000008365:1371-1393 +
  23. scf2_1100000003558:2529-2551 +
  24. scf2_1100000011604:519-541 +
  25. scf2_1100000009158:883-905 +
  26. scf2_1100000000789:1783-1805 +
  27. scf2_1100000004306:1566-1588 +
  28. scf2_1100000014728:1483-1505 +
  29. scf2_1100000004610:27929-27951 +
  30. scf2_1100000004650:16470-16492 +
  31. scf2_1100000004923:17281-17303 +
  32. scf2_1100000004954:1840120-1840142 +
  33. scf2_1100000004967:1033521-1033543 +
  34. dwi_4066  scf2_1100000004967:2849563-2849585 +
  35. scf2_1100000004967:3024169-3024191 +
  36. scf2_1100000004967:3026803-3026825 +
  37. scf2_1100000004968:2581079-2581101 +
  38. scf2_1100000000015:445-467 +
  39. scf2_1100000000454:4801-4823 +
  40. scf2_1100000000610:1984-2006 +
  41. scf2_1100000006153:444-466 -
  42. scf2_1100000002013:8327-8349 -
  43. scf2_1100000006338:97-119 -
  44. scf2_1100000004092:714-736 -
  45. scf2_1100000004354:1907-1929 -
  46. scf2_1100000004654:32092-32114 -
  47. scf2_1100000004659:19878-19900 -
  48. dwi_2296  scf2_1100000004850:54777-54799 -
  49. scf2_1100000004857:24894-24916 -
  50. scf2_1100000004922:64488-64510 -
  51. scf2_1100000004936:15371-15393 -
  52. scf2_1100000004958:2377694-2377716 -
  53. scf2_1100000004961:150515-150537 -
  54. scf2_1100000004968:2484290-2484312 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGTAGACCTGTTTCCCCACATCCTCGGAGAGCGGATCAAAAAGGATATTGGTGAGTTCGTCGGGCTACAAACCATCTTTGGATGGGTTCTGTGTGGGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
**************************************************...(((((..((.((......(((((....))))).....)).))))))).....................................................................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body
........................................AAGGATATTGGTGAGTTCGTCGGGC.......................................................................................................................................................................................... 25 0 20 0.40 8 8 0 0
...............................CGGATCAAAAAGGATATTGGTGAGT................................................................................................................................................................................................... 25 0 20 0.35 7 7 0 0
........................................................................CATCTTTGGATGGGTTCTGTGTG............................................................................................................................................................ 23 0 20 0.15 3 0 3 0
..................CATCCTCGGAGAGCGGATCAAAAAGG............................................................................................................................................................................................................... 26 0 16 0.06 1 1 0 0
........TGTTTCCCCACATCCTCGGAGAGCGGAT....................................................................................................................................................................................................................... 28 0 18 0.06 1 1 0 0
...........TTCCCCACATCCTCGGAGAGCGG......................................................................................................................................................................................................................... 23 0 18 0.06 1 1 0 0
.............................AGCGGATCAAAAAGGATATTGGT....................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0
........................................AAGGATATTGGTGAGTTCGT............................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
................CACATCCTCGGAGAGCGGAT....................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
........TGTTTCCCCACATCCTCGGAGA............................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0
...........................................................................CCTTGGATGGGTTCTGTGTGG........................................................................................................................................................... 21 1 20 0.05 1 0 0 1
...........................................GATATTGGTGAGTTCGTCGGG........................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0
...AGACCTGTTTCCCCACATCCTCGG................................................................................................................................................................................................................................ 24 0 20 0.05 1 0 1 0
..................................................................................TGGGTTCTGTGTGGGGCT....................................................................................................................................................... 18 0 20 0.05 1 1 0 0
........................................AAGGATATTGGCGAGTTCGTCGG............................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0
.........................................................................ATCTTTGGATGGGTTCTGTGTGGG.......................................................................................................................................................... 24 0 20 0.05 1 1 0 0
.....................................AAAAAGGATATTGGTGAGTTCGTCGG............................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0
................................GGATCAAAAAGGATATTGGTGAGT................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0

Anti-sense strand reads

ACATCTGGACAAAGGGGTGTAGGAGCCTCTCGCCTAGTTTTTCCTATAACCACTCAAGCAGCCCGATGTTTGGTAGAAACCTACCCAAGACACACCCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
**************************************************...(((((..((.((......(((((....))))).....)).))))))).....................................................................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
...............GGTGTAGGAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 26 0 15 1.60 24 22 2 0 0
.........................................TCCTATAACCACTCAAGCAGCCCGAT........................................................................................................................................................................................ 26 0 20 1.30 26 22 4 0 0
......................................................CAAGCAGCCCGATGTTTGGTAGAAACCT......................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
...............GGTGTAGGAGCCTCTCGCCTAGTTT................................................................................................................................................................................................................... 25 0 15 0.93 14 12 2 0 0
..............GGGTGTAGGAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 27 0 14 0.64 9 9 0 0 0
.....TGGACAAAGGGGTGTAGGAGCCTCT............................................................................................................................................................................................................................. 25 0 20 0.60 12 11 0 0 1
..............GGGTGTAGGAGCCTCTCGCCTAGTT.................................................................................................................................................................................................................... 25 0 15 0.53 8 8 0 0 0
................GTGTAGGAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 25 0 17 0.41 7 5 2 0 0
........................GCCTCTCGCCTAGTTTTTCCTATAAC......................................................................................................................................................................................................... 26 0 17 0.41 7 6 1 0 0
..............GGGTGTAGGAGCCTCTCGCCTAGT..................................................................................................................................................................................................................... 24 0 17 0.35 6 6 0 0 0
..................GTAGGAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 23 0 17 0.35 6 5 1 0 0
..................GTAGGAGCCTCTCGCCTAGTTTTT................................................................................................................................................................................................................. 24 0 17 0.35 6 6 0 0 0
.............GGGGTGTAGGAGCCTCTCGCCTAGTT.................................................................................................................................................................................................................... 26 0 15 0.33 5 5 0 0 0
.........................................TCTTATAACCACTCAAGCAGCCCGATG....................................................................................................................................................................................... 27 1 3 0.33 1 1 0 0 0
............................CTCGCCTAGTTTTTCCTATAACCACT..................................................................................................................................................................................................... 26 0 16 0.31 5 3 2 0 0
.........................CCTCTCGCCTAGTTTTTCCTATAAC......................................................................................................................................................................................................... 25 0 18 0.28 5 5 0 0 0
....................AGGAGCCTCTCGCCTAGTTTTTCCTAT............................................................................................................................................................................................................ 27 0 15 0.27 4 3 1 0 0
.......................................TTTCCTATAACCACTCAAGCAGCCCGAT........................................................................................................................................................................................ 28 0 20 0.25 5 5 0 0 0
.............GGGGTGTAGGAGCCTCTCGCCTAGT..................................................................................................................................................................................................................... 25 0 17 0.24 4 4 0 0 0
..............GGGTGTAGGAGCCTCTCGCCTAGTTT................................................................................................................................................................................................................... 26 0 14 0.21 3 2 1 0 0
.....................GGAGCCTCTCGCCTAGTTTTTCCTAT............................................................................................................................................................................................................ 26 0 15 0.20 3 3 0 0 0
.CATCTGGACAAAGGGGTGTAGGAGCCT............................................................................................................................................................................................................................... 27 0 20 0.20 4 1 3 0 0
...............GGTGTAGGAGCCTCTCGCCTAGTT.................................................................................................................................................................................................................... 24 0 17 0.18 3 3 0 0 0
................GTGTAGGAGCCTCTCGCCTAGTTT................................................................................................................................................................................................................... 24 0 17 0.18 3 2 1 0 0
......................................TTTTCCTATAACCACTCAAGCAGCC............................................................................................................................................................................................ 25 0 20 0.15 3 2 0 1 0
.........................................TCCTATAACCACTCAAGCAGCCCGA......................................................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0
......................GAGCCTCTCGCCTAGTTTTTCCTATAAC......................................................................................................................................................................................................... 28 0 14 0.14 2 1 1 0 0
......................GAGCCTCTCGCCTAGTTTTTCCTAT............................................................................................................................................................................................................ 25 0 15 0.13 2 1 1 0 0
..................GTAGGAGCCTCTCGCCTAGTTTTTCCTAT............................................................................................................................................................................................................ 29 0 15 0.13 2 2 0 0 0
..............TGGTGTAGGAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 27 1 16 0.13 2 1 1 0 0
..................GTAGGAGCCTCTCGCCTAGTTTTTCCT.............................................................................................................................................................................................................. 27 0 16 0.13 2 2 0 0 0
.......................AGCCTCTCGCCTAGTTTTTCCTATAAC......................................................................................................................................................................................................... 27 0 17 0.12 2 1 1 0 0
................GTGTAGGAGGCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 25 1 19 0.11 2 0 2 0 0
...............GGTGTAGGAGCCTCTCGCCTAGT..................................................................................................................................................................................................................... 23 0 19 0.11 2 2 0 0 0
..........................................................................AGAAACCTACCCAAGACACACCCCGA....................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0
....CTGGACAAAGGGGTGTAGGAGCCTCT............................................................................................................................................................................................................................. 26 0 20 0.10 2 0 2 0 0
...................................AGTTTTTCCTATAACCACTCAAGCAG.............................................................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0
.....................GGAGCCTCTCGCCTAGTTTTTCCTATAAC......................................................................................................................................................................................................... 29 0 14 0.07 1 1 0 0 0
..........................CTCTCGCCTAGTTTTTCCTATAACCACT..................................................................................................................................................................................................... 28 0 14 0.07 1 1 0 0 0
.............GGGGTGTAGGAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 28 0 14 0.07 1 1 0 0 0
.............GTGGTGTAGGAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 28 1 14 0.07 1 1 0 0 0
............AGGGGTGTAGGAGCCTCTCGCCTAGTT.................................................................................................................................................................................................................... 27 0 15 0.07 1 1 0 0 0
....................AGGAGCCTCTCGCCTAGTTTTTCCTA............................................................................................................................................................................................................. 26 0 15 0.07 1 1 0 0 0
..................GTAGGAGCCTCTCGCCTAGTTTTTCCTA............................................................................................................................................................................................................. 28 0 15 0.07 1 1 0 0 0
..............................CGCCTAGTTTTTCCTATAACCAC...................................................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0
..............TGGTGTAGGAGCCTCTCGCCTAGTTT................................................................................................................................................................................................................... 26 1 16 0.06 1 0 1 0 0
.................TGTAGGAGCCTCTCGCCTAGTTT................................................................................................................................................................................................................... 23 0 17 0.06 1 1 0 0 0
..................GTAGGAGCCTCTCGCCTAGTTT................................................................................................................................................................................................................... 22 0 17 0.06 1 1 0 0 0
.............GGGTTGTAGGAGCCTCTCGCCTAGT..................................................................................................................................................................................................................... 25 1 17 0.06 1 1 0 0 0
.............CCGTTGTAGGAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 28 3 17 0.06 1 1 0 0 0
............TGGGGTGTAGGAGCCTCTCGCCTAGT..................................................................................................................................................................................................................... 26 1 18 0.06 1 0 1 0 0
..................GTAGGAGCCTCTCGCCTAGTTTTC................................................................................................................................................................................................................. 24 1 18 0.06 1 1 0 0 0
............AGGGGTGTAGGAGCCTCTCGCC......................................................................................................................................................................................................................... 22 0 18 0.06 1 1 0 0 0
.......................AGCCTCTCGCCTAGTTTTTCCTAT............................................................................................................................................................................................................ 24 0 18 0.06 1 0 1 0 0
.................TGTAGGAGCCTCTCGCCTAGTT.................................................................................................................................................................................................................... 22 0 19 0.05 1 0 1 0 0
............................CTCGCCTAGTTTTTCCTATAACCA....................................................................................................................................................................................................... 24 0 19 0.05 1 1 0 0 0
................GTGTAGCAGCCTCTCGCCTAGTTTT.................................................................................................................................................................................................................. 25 1 19 0.05 1 1 0 0 0
...............GGTGTAGGAGCCTCTCGCCTAG...................................................................................................................................................................................................................... 22 0 19 0.05 1 1 0 0 0
......................................................................TGGTAGAAACCTGCCCAAGACACAC............................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0
....CTGGACAAAGGGGTGTAGGAGCCTC.............................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
.....................................................................TTGGTAGAAACCTACCCAAGACACACCC.......................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
...............................GCCTAGTTTTTCCTATAACCACTCAA.................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0
.CATCTGGACAAAGGGGTGT....................................................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0
......................................TTTCCCTATAACCACTCAAGCAGCC............................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0
......................................................................TGGTAGAAACCTACCCAAGACACA............................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0
........................................TTCCTATAACCACTCGAGCAGCCCGAT........................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0
.....................................................................TTGGTAGAAACCTACCCAAGACACAC............................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0
..............................................TAACCACTCAAGCAGCCCGAT........................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
.....TGGACAAAGGGGTGTAGGAGCC................................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0
....CTGGACAAAGGGGTGTAGGAGCCT............................................................................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 1
...................................AGTTTTTCCAATAACCACTCAAGCA............................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0
......GGACAAAGGGGTGTAGGAGCCTCT............................................................................................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0
.....................................................................TTGGTAGAAACCTACCCAAGACACA............................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
............................................TATAACCACTCAAGCAGCCCGAT........................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0
...................................AGTTTTTCCTATAACCACTCAAGCAGC............................................................................................................................................................................................. 27 0 20 0.05 1 0 0 1 0
................GTGTAGGAGCCTCTCGCCTAGT..................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
........................................TTCCTATAACCACTCAAGCAGC............................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
..ATCTGGACAAAGGGGTGTAGGAGCCT............................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
.......................................TTTCCTATAACCACTCAAGCAGCCCG.......................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
.......................................TTTCCTATAACCACTCAAGCAGCCC........................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004850:54621-54871 - dwi_2296 TGTAGACCTGTTTCCCCACATCCTCGGAGAGCGGATCAA-AAAGGATATTGG----TGA---GTTCGTCGGGCTACAAACCATCTTTGGATGGGTTCTGTGTGGGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
droVir3 scaffold_13049:24654573-24654665 - CGCTGAAATCCTACCGTCCATACTAACGAGCGGCT-CCCATCCTATTATATG----TGGCACGTTGCTGGGCCAGGAAACTATTTTCGGGTGGATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6541:722693-722786 + CGCGGATATCTTTCCGACTATCATTCAGGGAGGTT-ATCACCCTAATATTTG----TGGGCCTCTTATAGGTCTGGAGACTGTTTTCGGTTGGGTACTG----------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_166:6162-6254 - TGCCGACATCCTTCCATCCATCCTATTGAGCGGCT-CATAGACGAACATCTG----TGGATCTCTCCTCGGACAGGAAACCATTTTCGGATGGGTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_146:55224-55316 - TGTCGACATCCTTCCATCCATCCTATTGAGCGGCT-CACAGACGAACATCTG----TGGATCTCTCCTCGGACAGGAAACCATTTTCGGATGGGTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_9162:1204-1295 - CGCGGATTTATATCCACAAATTTCACTGCCGGAGA---TAGCC----AAAAA----GGGTATGCTTCTTGGGCA-AAAACTATCTTTGGATGGACAGTGTCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000394840:25183-25276 + AGCGGACATTCTTCCGTCCATTCTCCTCAGTAATG-CCAAGCCTAACATATG----CGGGTCGCTTCTCGGTCAGGAGACCATTTTTGGATGGGTGCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000299159:15409-15507 + TGCCGATATCCTGCCATCGATCCTCCTAAGCGGCT-CCCATTCCAATATTTG----TGGAACACTCCTGGGTCAAGAGACCATATTCGGGTGGATTCTTTGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453082:19508-19600 - AGCTGATATATTGCCATCCGTGCTGCTGAGCGGAA-CAAGAACAAATATTTG----CGGCTCTCTTCTCGGTCAAGAAACCATTTTCGGTTGGGTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490201:18617-18716 - AGCCGACATTCTGCCTTCGGTTCTCCTAAATGGGG-CAAAAACAAACATCTG----TGGCTCCCTCCTTGGACAAGAAACAATTTTCGGGTGGGTGCTCACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000760772:33402-33500 + AGCTGATATCCTTCCATCCGTGCTGCTGAGCGGTA-CAAAGACCAACATCTG----CGGATCTCTTTTTGGGCAATAGACCATCTTCGGGTGGGTGCTCTTTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413715:1753-1852 + AGCCGACATTCTGCCTTCGGTTCTCCTAAATGGGG-CAAAAACAAACATCTG----TGGCTCCCTCCTTGGACAAGAAACAATTTTCGGGTGGGTGCTCACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409771:4300-4393 + AGCTGACATTCTTCCATCCATTTTCCTCGGTAATT-CCAGGGCTAACATCTG----CTGGTCACTTCTCGGTCAGGAAACCATTTTTGGATGGGTGCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:23512522-23512621 - AGCCGACATCCTGCCTTCGGTGCTTCTGAGTGGAG-CAAAAACCAACATCTG----TGGCTCTCTCTTGGGGCAAGAGACCATTTTCGGCTGGGTACTAACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_1881:696-789 - TATGGATCTATTTCCCCTGATTATGATGGAGAAAA--------TAAAAACTGTGAATGG---AATCTTGGGACTAAAAACCAGATTTGGATGGATTGTGTCCGGG----------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_2567:35684-35776 - TGTGGATCTATTTCCCCTGATTATGATGGAGAAAA--------TAAAAACCGTGAATGG---AATCTTGGGACAAAAAACCAAATTTGGATGGATTGTGTCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4840:173600-173692 - TGTGGATCTATTTCCCCTGATTATGTTGGAGAAAA-TAAAAACC-------GTAAATGG---AATCTTGGGACGAAAAACCAAATTTGGATGGATTGTGTGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGTAGACCTGTTTCCCCACATCCTCGGAGAGCGGATCAA-AAAGGATATTGG----TGA---GTTCGTCGGGCTACAAACCATCTTTGGATGGGTTCTGTGTGGGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................AAGGATATTGG----TGA---GTTCGTCGGGC..........................................................................................................................................................................................25200.40808000
...............................CGGATCAA-AAAGGATATTGG----TGA---GT...................................................................................................................................................................................................25200.35707000
................................................................................CATCTTTGGATGGGTTCTGTGTG............................................................................................................................................................23200.15300030
..................CATCCTCGGAGAGCGGATCAA-AAAGG......................................................................................................................................................................................................................26160.06101000
........TGTTTCCCCACATCCTCGGAGAGCGGAT...............................................................................................................................................................................................................................28180.06101000
...........TTCCCCACATCCTCGGAGAGCGG.................................................................................................................................................................................................................................23180.06101000
.............................AGCGGATCAA-AAAGGATATTGG----T..........................................................................................................................................................................................................23200.05100010
.........................................AAGGATATTGG----TGA---GTTCGT...............................................................................................................................................................................................20200.05101000
................CACATCCTCGGAGAGCGGAT...............................................................................................................................................................................................................................20200.05101000
........TGTTTCCCCACATCCTCGGAGA.....................................................................................................................................................................................................................................22200.05101000
............................................GATATTGG----TGA---GTTCGTCGGG...........................................................................................................................................................................................21200.05100010
...AGACCTGTTTCCCCACATCCTCGG........................................................................................................................................................................................................................................24200.05100010
..........................................................................................TGGGTTCTGTGTGGGGCT.......................................................................................................................................................18200.05101000
.................................................................................ATCTTTGGATGGGTTCTGTGTGGG..........................................................................................................................................................24200.05101000
.....................................AA-AAAGGATATTGG----TGA---GTTCGTCGG............................................................................................................................................................................................26200.05100010
................................GGATCAA-AAAGGATATTGG----TGA---GT...................................................................................................................................................................................................24200.05100010
droVir3
CGCTGAAATCCTACCGTCCATACTAACGAGCGGCT-CCCATCCTATTATATG----TGGCACGTTGCTGGGCCAGGAAACTATTTTCGGGTGGATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................CATCCTATTATATG----TGGCACGTTG.................................................................................................................................................................................................24160.0060006030100000000000000009778510001033024000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCTGG.............................................................................................................................................................................................28138.003800100100000000000000000002514210000000003000000000000000000000000
......................................CATCCTATTATATG----TGGCACGT...................................................................................................................................................................................................22128.0028001010000000100000000006415040000011003000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGA................................................................................................................................................................................................25127.0027000040000000000000000003207200002003031000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTT..................................................................................................................................................................................................23124.0024002000100000200000000002236000002112000000000000000000000000000
...................ATACTAACGAGCGGCT-CCCATCCTAT.....................................................................................................................................................................................................................26117.00170000000000000000000000000103000000001300000000000000000000000000
......................................CATCCTATTATATG----TGGCACG....................................................................................................................................................................................................2117.007001000000000000000000001021000001001000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGC................................................................................................................................................................................................2516.006002000000000000000000000004000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCAC.....................................................................................................................................................................................................2016.006001000000000000000000000000110000010020000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCTG..............................................................................................................................................................................................2715.005005000000000000000000000000000000000000000000000000000000000000
...................ATACTAACGAGCGGCT-CCCATCC........................................................................................................................................................................................................................2315.005000000000000000000000000000300000010100000000000000000000000000
................TCCATACTAACGAGCGGCT-CCCATC.........................................................................................................................................................................................................................2515.005002000000000000000000000000100000000200000000000000000000000000
...................ATACTAACGAGCGGCT-CCCATC.........................................................................................................................................................................................................................2213.003000000001000000000000000000100000000100000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCT...............................................................................................................................................................................................2613.003001000000000000000000000001100000000000000000000000000000000000
......................................CATCCTATTATATG----TGGC.......................................................................................................................................................................................................1813.003000000000000000000000000000010000020000000000000000000000000000
...................ATACTAACGAGCGGCT-CCCATCCTA......................................................................................................................................................................................................................2513.003000000000000000000000000000000000000300000000000000000000000000
......................................CATCCTATTATATG----TGGCA......................................................................................................................................................................................................1913.003001000000000000000000000101000000000000000000000000000000000000
........TCCTACCGTCCATACTAACGAGCGG..................................................................................................................................................................................................................................2523.006000000001000000000001000100010000000110000000000000000000000000
........TCCTACCGTCCATACTAACGAGCGGC.................................................................................................................................................................................................................................2622.505001000000000000000000000001010000000011000000000000000000000000
........TCCTACCGTCCATACTAACGAGC....................................................................................................................................................................................................................................2322.505000000000000000000000000002010000020000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCTGA.............................................................................................................................................................................................2812.002001010000000000000000000000000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCTTT.............................................................................................................................................................................................2812.002000000000000000000000000100000000000001000000000000000000000000
.......................................ATCCTATTATATG----TGGCACGTTG.................................................................................................................................................................................................2312.002001000000000000000000000100000000000000000000000000000000000000
................TCCATACTAACGAGCGGCT-CCC............................................................................................................................................................................................................................2222.004000000000000000000000000001000000010200000000000000000000000000
.......................................ATCCTATTATATG----TGGCACGTTGCTG..............................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
........................................TCCTATTATATG----TGGCACGTTGCTGG.............................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
...................ATACTAACGAGCGGCT-CCC............................................................................................................................................................................................................................1922.004000000000000000000000000000000000000100000012000000000000000000
.GCTGAAATCCTACCGTCC................................................................................................................................................................................................................................................1812.002000000000020000000000000000000000000000000000000000000000000000
................TCCATACTAACGAGCGGCT-C..............................................................................................................................................................................................................................2021.503001000000000000000000000020000000000000000000000000000000000000
...................ATACTAACGAGCGGCT-CCCATCCT.......................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
................TCCATACTAACGAGCGGCT-CCCA...........................................................................................................................................................................................................................2321.002000000000000000000000000010100000000000000000000000000000000000
................TCCATACTAACGAGCGGC.................................................................................................................................................................................................................................1821.002000000000000000000000000010100000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGT................................................................................................................................................................................................2511.001000000000000000000000000000000001000000000000000000000000000000
...................ATACTAACGAGCGGCT-CCCATCCA.......................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
....................TACTAACGAGCGGCT-CCCATCCTAT.....................................................................................................................................................................................................................2511.001000000000000000000000000000000000001000000000000000000000000000
................TCCATACTAACGAGCGGCT-CCCATCCTC......................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000001
......................................CATCCTATTATATG----TGGCACGTTGCC...............................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................ATTATATG----TGGCACGTTGA................................................................................................................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
................TCCATACTAACGAGCGGCT-CCCAT..........................................................................................................................................................................................................................2421.002000000000000000000000000010000000000100000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTC.................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
..................................T-CCCATCCTATTATATG----TGGCACGT...................................................................................................................................................................................................2511.001000000000000000000000000000000000000000100000000000000000000000
........TCCTACCGTCCATACTAACGAGCGGCT-...............................................................................................................................................................................................................................2721.002000000000000000000000000000001000001000000000000000000000000000
........TCCTACCGTCCATACTAACGAG.....................................................................................................................................................................................................................................2221.002000000000000000000000000000020000000000000000000000000000000000
..................CATACTAACGAGCGGCT-CCCATC.........................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000100000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTA.................................................................................................................................................................................................2421.002000000000000000000000000001000001000000000000000000000000000000
..................................T-CCCATCCTATTATATG----TGGCACGTTG.................................................................................................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
...............GTCCATACTAACGAGCGGCT-CCCATCCTA......................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGAA..................................................................................................................................................................................................2311.001000000000000000000000001000000000000000000000000000000000000000
..................................T-CCCATCCTATTATATG----TGGCACGTTGC................................................................................................................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
........TCCTACCGTCCATACTAACGAGCG...................................................................................................................................................................................................................................2421.002000000001000000000000000000010000000000000000000000000000000000
.....................................CCATCCTATTATATG----TGGCACGTTG.................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................CTATTATATG----TGGCACGTTGC................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................T-CCCATCCTATTATATG----TGGCAC.....................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
.....AAATCCTACCGTCCATACTAACGAGC....................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGAG...............................................................................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
.................CCATACTAACGAGCGGCT-CCCATCC........................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTTT................................................................................................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
..................................T-CCCATCCTATTATATG----TGG........................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................TCCTATTATATG----TGGCACGTTGCTG..............................................................................................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
................TCCATACTAACGAGCGGCT-CCCATCCTA......................................................................................................................................................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTG..................................................................................................................................................................................................2311.001000000000000000000000001000000000000000000000000000000000000000
..........................CGAGCGGCT-CCCATCCTATTATATG----T..........................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000010000000000000
......................................CATCCTATTATATG----TGGCACGTTGCTGGG............................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCTGT.............................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
...................ATACTAACGAGCGGCT-CCCA...........................................................................................................................................................................................................................2021.002000000000010000000000000000000000000100000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCTAT.............................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
................TCCATACTAACGAGCGGCT-CC.............................................................................................................................................................................................................................2121.002000000000000000000000000010000000000100000000000000000000000000
.................CCATACTAACGAGCGGCT-CCCATCCTC......................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................TCCATACTAACGAGCGGCT-CCCATCC........................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTT.................................................................................................................................................................................................2411.001000000000000000000000000010000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGAA...............................................................................................................................................................................................2620.501000000000000000000000000001000000000000000000000000000000000000
...........TACCGTCCATACTAACGAGCG...................................................................................................................................................................................................................................2120.501000000000000000000000000000000000010000000000000000000000000000
.........CCTACCGTCCATACTAACGAGCGG..................................................................................................................................................................................................................................2420.501000000000000000000000000100000000000000000000000000000000000000
...................ATACTAACGAGCGGCT-CC.............................................................................................................................................................................................................................1820.501000000000010000000000000000000000000000000000000000000000000000
.......................................ATCCTATTATATG----TGGCACGTTGCTCA.............................................................................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
...........TACCGTCCATACTAACGAGC....................................................................................................................................................................................................................................2020.501000000000000000000000000001000000000000000000000000000000000000
................TCCATACTAACGAGCGGCT-TT.............................................................................................................................................................................................................................2120.501000000000000000000000000000000000000100000000000000000000000000
................TCCATACTAACGAGCGGCT-CT.............................................................................................................................................................................................................................2120.501000000000000000000000000000000000000100000000000000000000000000
.......................................ATCCTATTATATG----TGGCACGTTGCCC..............................................................................................................................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
................TCCATACTAACGAGCGGCT-G..............................................................................................................................................................................................................................2020.501000000000000000000000000000100000000000000000000000000000000000
.................CCATACTAACGAGCGGCT-CC.............................................................................................................................................................................................................................2020.501000000000000000000000000000100000000000000000000000000000000000
...........TACCGTCCATACTAACGAGCGG..................................................................................................................................................................................................................................2220.501000000000000000000000000000000000000001000000000000000000000000
......................................CATCCTATTATATG----TGGCAT.....................................................................................................................................................................................................2020.501000010000000000000000000000000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCTC..............................................................................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTATC...............................................................................................................................................................................................2620.501000000000000000000000000000100000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTAT................................................................................................................................................................................................2520.501001000000000000000000000000000000000000000000000000000000000000
........TCCTACCGTCCATACTAACGAGCC...................................................................................................................................................................................................................................2420.501000000000000000000000000000010000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTGCCC..............................................................................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
...........TACCGTCCATACTAACGAGCGGC.................................................................................................................................................................................................................................2320.501000000000000000000000000000001000000000000000000000000000000000
...................ATACTAACGAGCGGCT-CT.............................................................................................................................................................................................................................1820.501000000000010000000000000000000000000000000000000000000000000000
...................ATACTAACGAGCGGCT-CCCC...........................................................................................................................................................................................................................2020.501000000000010000000000000000000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTAAA...............................................................................................................................................................................................2630.331000000000000000000000000100000000000000000000000000000000000000
......................................CATCCTATTATATG----TGGCACGTTTTG...............................................................................................................................................................................................2630.331000000000000000000000000000000001000000000000000000000000000000
...................ATACTAACGAGCGGCT-CCCATCCTT......................................................................................................................................................................................................................2530.331000000000000000000000000000000000000100000000000000000000000000
........................................................................CAGGAAACTATTTTCGGGTGGATT...................................................................................................................................................................24180.224000000000000000000000000000000000000301000000000000000000000000
........................................................................CAGGAAACTATTTTCGGGTGGAT....................................................................................................................................................................23180.112000000000000000000000000100000000000100000000000000000000000000
..................................................TG----TGGCACGTTGCTGGGCCAGGAAACTAT................................................................................................................................................................................29140.071000000000000000000000000010000000000000000000000000000000000000
...................................................................TGGGCCAGGAAACTATTTTCGGGTGG......................................................................................................................................................................26150.071000000000000000000000000000100000000000000000000000000000000000
........................................................TGGCACGTTGCTGGGCCAGGAAACTA.................................................................................................................................................................................26150.071001000000000000000000000000000000000000000000000000000000000000
...................................................................TGGGCCAGGAAACTATTTTCGGGTG.......................................................................................................................................................................25150.071000000000000000000000000010000000000000000000000000000000000000
...................................................................TGGGCCAGGAAACTATTTTCGGG.........................................................................................................................................................................23160.061000000000010000000000000000000000000000000000000000000000000000
.......................................................................CCAGGAAACTATTTTCGGGTGGATT...................................................................................................................................................................25160.061000000000100000000000000000000000000000000000000000000000000000
.......................................................................CCAGGAAACTATTTTCGGGTG.......................................................................................................................................................................21160.061000000000000000000000000001000000000000000000000000000000000000
.....................................................................GGCCAGGAAACTATTTTCGGGTGGAT....................................................................................................................................................................26160.061000000000000000000000000000000001000000000000000000000000000000
.........................................................................AGGAAACTATTTTCGGGTGGATT...................................................................................................................................................................23180.061001000000000000000000000000000000000000000000000000000000000000
........................................................................CAGGAAACTATTTTCGGGTG.......................................................................................................................................................................20180.061000000000000000000000000000000000000100000000000000000000000000
.........................................................................AGGAAACTATTTTCGGGTGGAT....................................................................................................................................................................22180.061001000000000000000000000000000000000000000000000000000000000000
........................................................................CAGGAAACTATTTTCGGGTGGA.....................................................................................................................................................................22180.061000000000000000000000000000000000000100000000000000000000000000
........................................................................CAGGAAACTATTTTCGGGT........................................................................................................................................................................19180.061001000000000000000000000000000000000000000000000000000000000000
........................................................................CAGGAAACTATTTTCGGGTGGATTT..................................................................................................................................................................25180.061000000000000000000000000000000000000001000000000000000000000000
........................................................................CAGGAAACTATTTTCGGG.........................................................................................................................................................................18190.051000000000000000000000000000000000010000000000000000000000000000
.........................................................GGCACGTTGCTGGGCCAGGAA.....................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
...............................................ATATG----TGGCACGTTGCTGG.............................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
................................................TATG----TGGCACGTTGCTGGGCCAGGAAA....................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
...............................................ATATG----TGGCACGTTGCTGGG............................................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
CGCGGATATCTTTCCGACTATCATTCAGGGAGGTT-ATCACCCTAATATTTG----TGGGCCTCTTATAGGTCTGGAGACTGTTTTCGGTTGGGTACTG----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................GAGACTGTTTTCGGTTGGGTACTG----------------------------------------------------------------------------------------------------------------------------------------------------------------24201.20242400000
...........................................................................GAGACTGTTTTCGGTTGGGTACT.................................................................................................................................................................23200.95191900000
...........................................................................GAGACTGTTTTCGGTTGGGTAC..................................................................................................................................................................22200.459410040
.....................CATTCAGGGAGGTT-ATCACCCTAA.....................................................................................................................................................................................................................24200.204100030
............................................................................AGACTGTTTTCGGTTGGGTACTG----------------------------------------------------------------------------------------------------------------------------------------------------------------23200.153300000
.............................................................................GACTGTTTTCGGTTGGGTACTG----------------------------------------------------------------------------------------------------------------------------------------------------------------22200.102110000
............................................................................AGACTGTTTTCGGTTGGGTAC..................................................................................................................................................................21200.102200000
...........................................................................GAGACTGTTTTCGGTTGGGTACC.................................................................................................................................................................23200.102000020
...........................................................................GAGACTGTTTTCGGTTGGGTACTT----------------------------------------------------------------------------------------------------------------------------------------------------------------24200.051100000
...........................................................GCCTCTTATAGGTCTGGAGACTGT................................................................................................................................................................................24200.051100000
...........................................................GCCTCTTATAGGTCTGGAGACTG.................................................................................................................................................................................23200.051100000
............................................................................AGACTGTTTTCGGTTGGGTACT.................................................................................................................................................................22200.051100000
.....................CATTCAGGGAGGTT-ATCACCCTAATAT..................................................................................................................................................................................................................27200.051100000
.....................CATTCAGGGAGGTT-ATCACCCTAAT....................................................................................................................................................................................................................25200.051100000
...........................................................................GAGACTGTTTTCGGTTGGGTA...................................................................................................................................................................21200.051100000
.....................CATTCAGGGAGGTT-ATCACCCTA......................................................................................................................................................................................................................23200.051100000
.....................CATTCAGGGAGGTT-ATCACCC........................................................................................................................................................................................................................21200.051100000
dp5
TGCCGACATCCTTCCATCCATCCTATTGAGCGGCT-CATAGACGAACATCTG----TGGATCTCTCCTCGGACAGGAAACCATTTTCGGATGGGTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................TCGGACAGGAAACCATTTTCGGAT........................................................................................................................................................................2449.253702600100730
...................................................................TCGGACAGGAAACCATTTTCGG..........................................................................................................................................................................22125.3364043000001740
...................................................................TCGGACAGGAAACCATTTTCGGA.........................................................................................................................................................................2344.501811500000200
...................................................................TCGGACAGGAAACCATTTTCGGATG.......................................................................................................................................................................2543.501401100000210
......................................TAGACGAACATCTG----TGGATCTCTCC................................................................................................................................................................................................2513.0030300000000
...................................................................TCGGACAGGAAACCATTTTCGGATGG......................................................................................................................................................................2642.50100500000410
...................................................................TCGGACAGGAAACCA.................................................................................................................................................................................15151.402100000001830
...........TTCCATCCATCCTATTGAGCGG..................................................................................................................................................................................................................................2211.0010100000000
......CATCCTTCCATCCATCCTATTGAGC....................................................................................................................................................................................................................................2511.0010100000000
.....................................ATAGACGAACATCTG----TGGAT......................................................................................................................................................................................................2011.0010100000000
...................................................................TCGGACAGGAAACCATTTTCGGATGGGT....................................................................................................................................................................2841.0040000001210
......CATCCTTCCATCCATCCTATTGAG.....................................................................................................................................................................................................................................2411.0010100000000
......................................TAGACGAACATCTG----TGGATCTCT..................................................................................................................................................................................................2311.0010100000000
.......ATCCTTCCATCCATCCTATTGAGC....................................................................................................................................................................................................................................2411.0010100000000
......CATCCTTCCATCCATCCTATTGA......................................................................................................................................................................................................................................2311.0010100000000
........TCCTTCCATCCATCCTATTGAGCGG..................................................................................................................................................................................................................................2511.0010100000000
................................................................TCCTCGGACAGGAAACCATTTTCGGA.........................................................................................................................................................................2640.7530000000300
...................................................................TCGGACAGGAAACCATTTTCGGAAA.......................................................................................................................................................................2540.5020100001000
....................................................................CGGACAGGAAACCATTTTCGGA.........................................................................................................................................................................2240.5020200000000
...................................................................TCGGACAGGAAACCATTTTCGGATA.......................................................................................................................................................................2540.5020200000000
...................................................................TCGGACAGGAAACCATTTTCGGATT.......................................................................................................................................................................2540.5020200000000
...................................................................TCGGACAGGAAACCATTTTCGGAA........................................................................................................................................................................2440.5020200000000
....................................................................CGGACAGGAAACCATTTTCGGAT........................................................................................................................................................................2340.5020200000000
...................................................................TCGGACAGGAAACCATTTTCG...........................................................................................................................................................................21130.4660400000110
....................................................................CGGACAGGAAACCATTTTCGG..........................................................................................................................................................................21120.4250500000000
.........................................ACGAACATCTG----TGGATCTCTCCTCGG............................................................................................................................................................................................26120.2530000000300
....................................................................CGGACAGGAAACCATTTTCGGATGG......................................................................................................................................................................2540.2510100000000
....................................................................CGGACAGGAAACCATTTTCGGATA.......................................................................................................................................................................2440.2510100000000
................................................TCTG----TGGATCTCTCCTCGGACA.........................................................................................................................................................................................22120.2530300000000
...................................................................TCGGACAGGAAACCATTTTCGGATGGG.....................................................................................................................................................................2740.2510000000010
...................................................................TCGGACAGGAAACCATTTTCGGATAAA.....................................................................................................................................................................2740.2510100000000
..................................................................CTCGGACAGGAAACCATTTTCGGAT........................................................................................................................................................................2540.2510100000000
...................................................................TCGGACAGGAAACCATTTTCGGATAA......................................................................................................................................................................2640.2510100000000
...................................................................TCGGACAGGAAACCATTTTCGGATGGGG....................................................................................................................................................................2840.2510000000100
.................................................................CCTCGGACAGGAAACCATTTTCGGA.........................................................................................................................................................................2540.2510100000000
................................................................TCCTCGGACAGGAAACCA.................................................................................................................................................................................18140.2130000000300
TGCCGACATCCTTCCATCCATCC............................................................................................................................................................................................................................................23100.2020200000000
............................................AACATCTG----TGGATCTCTCCTCGGACA.........................................................................................................................................................................................26120.1720000000020
...................................................................TCGGACAGGAAACCATTTTC............................................................................................................................................................................20130.1520200000000
...........................................................ATCTCTCCTCGGACAGGAAACCATT...............................................................................................................................................................................2590.1110100000000
.........................................................GGATCTCTCCTCGGACAGGAAAC...................................................................................................................................................................................2390.1110100000000
TGCCGACATCCTTCCATCCATCAA...........................................................................................................................................................................................................................................24100.1010100000000
TGCCGACATCCTTCCATCCATCCT...........................................................................................................................................................................................................................................24100.1010100000000
..................................................TG----TGGATCTCTCCTCGGACAGGAAA....................................................................................................................................................................................25100.1010000000010
........................................GACGAACATCTG----TGGATCTCTCCTC..............................................................................................................................................................................................25100.1010100000000
.......................................AGACGAACATCTG----TGGATCTCTCC................................................................................................................................................................................................24100.1010100000000
.........................................ACGAACATCTG----TGGATCTCTC.................................................................................................................................................................................................21120.0810000001000
..............................................CATCTG----TGGATCTCTCCTCG.............................................................................................................................................................................................20120.0810100000000
.........................................ACGAACATCTG----TGGATCTCT..................................................................................................................................................................................................20120.0810100000000
..................................................................CTCGGACAGGAAACCATTTTCGG..........................................................................................................................................................................23120.0810100000000
.....................................................................GGACAGGAAACCATTTTCGG..........................................................................................................................................................................20120.0810100000000
.............................................ACATCTG----TGGATCTCTCCTCGG............................................................................................................................................................................................22120.0810100000000
...........................................GAACATCTG----TGGATCTCTCCTCGG............................................................................................................................................................................................24120.0810100000000
...................................................................TCGGACAGGAAACCATTTTCGGT.........................................................................................................................................................................23120.0810100000000
............................................................TCTCTCCTCGGACAGGAAACCATTTTC............................................................................................................................................................................27130.0810000000010
............................................................TCTCTCCTCGGACAGGAAACCA.................................................................................................................................................................................22140.0710100000000
droPer2
TGTCGACATCCTTCCATCCATCCTATTGAGCGGCT-CACAGACGAACATCTG----TGGATCTCTCCTCGGACAGGAAACCATTTTCGGATGGGTTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................GACGAACATCTG----TGGATCTCTCCTC..............................................................................................................................................................................................25201.10220220000
........................................GACGAACATCTG----TGGATCTCTCCT...............................................................................................................................................................................................24200.60120120000
...........................................GAACATCTG----TGGATCTCTCCTCG.............................................................................................................................................................................................23200.408080000
...........................................GAACATCTG----TGGATCTCTCCTCGGA...........................................................................................................................................................................................25200.255050000
............................................AACATCTG----TGGATCTCTCCTCGG............................................................................................................................................................................................23200.204130000
.........................................ACGAACATCTG----TGGATCTCTCC................................................................................................................................................................................................22200.204040000
........TCCTTCCATCCATCCTATTGAGCGGCT-C..............................................................................................................................................................................................................................2880.131010000
........................................GACGAACATCTG----TGGATCTCTCCG...............................................................................................................................................................................................24200.051010000
....................................................................CGGACAGGAAACCATTTTCGG..........................................................................................................................................................................21200.051010000
.........................................ACGAACATCTG----TGGATCTCT..................................................................................................................................................................................................20200.051100000
..................................T-CACAGACGAACATCTG----TGGATCTCTC.................................................................................................................................................................................................27200.051010000
..........................TGAGCGGCT-CACAGACGAACATCT................................................................................................................................................................................................................24200.051010000
droAna3
CGCGGATTTATATCCACAAATTTCACTGCCGGAGA---TAGCC----AAAAA----GGGTATGCTTCTTGGGCA-AAAACTATCTTTGGATGGACAGTGTCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................CTGCCGGAGA---TAGCC----AAAAA----GGG........................................................................................................................................................................................................2351.407340000
............................CCGGAGA---TAGCC----AAAAA----GGGTATGCT..................................................................................................................................................................................................2651.206132000
...........................GCCGGAGA---TAGCC----AAAAA----GGGTATGCT..................................................................................................................................................................................................2751.005050000
............................CCGGAGA---TAGCC----AAAAA----GGGTAT.....................................................................................................................................................................................................2351.005022010
.........................CTGCCGGAGA---TAGCC----AAAAA----GG.........................................................................................................................................................................................................2251.005032000
..................................A---TAGCC----AAAAA----GGGTATGCTTC................................................................................................................................................................................................2251.005050000
...........................GCCGGAGA---TAGCC----AAAAA----GGGTAT.....................................................................................................................................................................................................2450.804130000
.........................CTGCCGGAGA---TAGCC----AAAAA----GGGT.......................................................................................................................................................................................................2450.804310000
.........................CTGCCGGAGA---TAGCC----AAAAA----GGGTA......................................................................................................................................................................................................2550.804040000
..................................A---TAGCC----AAAAA----GGGTATGCTTCT...............................................................................................................................................................................................2350.804130000
...................ATTTCACTGCCGGAGA---TAGCC----....................................................................................................................................................................................................................2140.753030000
..........TATCCACAAATTTCACTGCCGGAG.................................................................................................................................................................................................................................2440.753210000
............TCCACAAATTTCACTGCCGGAGA---TAGCC----....................................................................................................................................................................................................................2840.753030000
............................CCGGAGA---TAGCC----AAAAA----GGGTATGCTT.................................................................................................................................................................................................2750.603020010
............................CCGGAGA---TAGCC----AAAAA----GGGTATGC...................................................................................................................................................................................................2550.603030000
..................................A---TAGCC----AAAAA----GGGTATGCTTCTT..............................................................................................................................................................................................2450.603210000
...........................GCCGGAGA---TAGCC----AAAAA----GGGTATG....................................................................................................................................................................................................2550.603300000
...........................GCCGGAGA---TAGCC----AAAAA----GGGTATGC...................................................................................................................................................................................................2650.603030000
...........................GCCGGAGA---TAGCC----AAAAA----G..........................................................................................................................................................................................................1950.603021000
...............ACAAATTTCACTGCCGGAGA---TAGC.........................................................................................................................................................................................................................2440.502110000
..........TATCCACAAATTTCACTGCCGGA..................................................................................................................................................................................................................................2340.502200000
..........TATCCACAAATTTCACTGCCGGAGA---TAGC.........................................................................................................................................................................................................................2940.502200000
..........TATCCACAAATTTCACTGCCGG...................................................................................................................................................................................................................................2240.502110000
.............CCACAAATTTCACTGCCGGAGA---TAGCC----....................................................................................................................................................................................................................2740.502110000
............TCCACAAATTTCACTGCCGGAGA---TAG..........................................................................................................................................................................................................................2640.502020000
.......................CACTGCCGGAGA---TAGCC----AAAAA----GGG........................................................................................................................................................................................................2540.502110000
...............ACAAATTTCACTGCCGGAGA---TAG..........................................................................................................................................................................................................................2340.502110000
.......................CACTGCCGGAGA---TAGCC----AAAAA----GG.........................................................................................................................................................................................................2440.502011000
....................................................................TGGGCA-AAAACTATCTTTGGATGG......................................................................................................................................................................2470.433020001
....................................................................TGGGCA-AAAACTATCTTTGGATG.......................................................................................................................................................................2370.433120000
.................................................................TCTTGGGCA-AAAACTATCTTTGGATG.......................................................................................................................................................................2670.433111000
......................................TAGCC----AAAAA----GGGTATGCTTCTTGG............................................................................................................................................................................................2550.402002000
...........................GCCGGAGA---TAGCC----AAAAA----GGGT.......................................................................................................................................................................................................2250.402011000
...........................GCCGGAGA---TAGCC----AAAAA----GGG........................................................................................................................................................................................................2150.402020000
..........................TGCCGGAGA---TAGCC----AAAAA----GGGTAT.....................................................................................................................................................................................................2550.402002000
........................ACTGCCGGAGA---TAGCC----AAAAA----GG.........................................................................................................................................................................................................2350.402101000
..........................TGCCGGAGA---TAGCC----AAAAA----GGG........................................................................................................................................................................................................2250.402101000
...........................GCCGGAGA---TAGCC----AAAAA----GGGTATT....................................................................................................................................................................................................2550.402110000
..................................A---TAGCC----AAAAA----GGGTATGCTTCTTG.............................................................................................................................................................................................2550.402020000
............................CCGGAGA---TAGCC----AAAAA----GGGT.......................................................................................................................................................................................................2150.402020000
..................................A---TAGCC----AAAAA----GGGTATGCTTCTTGG............................................................................................................................................................................................2650.402101000
............................CCGGAGA---TAGCC----AAAAA----GGGTATG....................................................................................................................................................................................................2450.402200000
.........................CTGCCGGAGA---TAGCC----AAAAA----GGGTT......................................................................................................................................................................................................2560.332200000
...................................................................TTGGGCA-AAAACTATCTTTGGATGGA.....................................................................................................................................................................2670.292011000
.................................................AAA----GGGTATGCTTCTTGGGCA-AAAACT..................................................................................................................................................................................2770.292020000
.......................................................................GCA-AAAACTATCTTTGGATGGACA...................................................................................................................................................................2470.292110000
....................................................................TGGGCA-AAAACTATCTTTGGATGGAC....................................................................................................................................................................2670.292020000
...................................................................TTGGGCA-AAAACTATCTTTGGATGG......................................................................................................................................................................2570.292011000
.................................................................TCTTGGGCA-AAAACTATCTTTGGAT........................................................................................................................................................................2580.252020000
...........ATCCACAAATTTCACTGCCGGA..................................................................................................................................................................................................................................2240.251100000
............TCCACAAATTTCACTGCCGGAGA---.............................................................................................................................................................................................................................2340.251100000
.................................................AAA----GGGTATGCTTCTTGGGCA-AAAAC...................................................................................................................................................................................2680.252011000
.............CCACAAATTTCACTGCCGGAG.................................................................................................................................................................................................................................2140.251010000
......................................TAGCC----AAAAA----GGGTATGCTTCTTGGGC..........................................................................................................................................................................................2740.251010000
...........ATCCACAAATTTCACTGCCGGAGA---TA...........................................................................................................................................................................................................................2640.251100000
...........ATCCACAAATTTCACTGCCGGAGA---.............................................................................................................................................................................................................................2440.251010000
.......................CACTGCCGGAGA---TAGCC----AAAAA----GGGTA......................................................................................................................................................................................................2740.251100000
.................................................................TCTTGGGCA-AAAACTATCTTTGGA.........................................................................................................................................................................2480.252200000
....................TTTCACTGCCGGAGA---TAGCC----AAAAA----G..........................................................................................................................................................................................................2640.251100000
......................TCACTGCCGGAGA---TAGCC----AAAAA----GGG........................................................................................................................................................................................................2640.251100000
...............ACAAATTTCACTGCCGGAGA---TAT..........................................................................................................................................................................................................................2340.251010000
.................AAATTTCACTGCCGGAGA---TAGCC----AA..................................................................................................................................................................................................................2540.251100000
.....................TTCACTGCCGGAGA---TAGCC----AA..................................................................................................................................................................................................................2140.251100000
...........ATCCACAAATTTCACTGCCGGAC.................................................................................................................................................................................................................................2340.251010000
............TCCACAAATTTCACTGCCGGAGA---TAGC.........................................................................................................................................................................................................................2740.251100000
....................TTTCACTGCCGGAGA---TAGCC----AAAAA----GG.........................................................................................................................................................................................................2740.251001000
......................TCACTGCCGGAGA---TAGCC----AAAAA----GG.........................................................................................................................................................................................................2540.251001000
..........TATCCACAAATTTCACTGCCG....................................................................................................................................................................................................................................2140.251100000
.....................TTCACTGCCGGAGA---TAGCC----AAAAA----GG.........................................................................................................................................................................................................2640.251001000
........................ACTGCCGGAGA---TAGCC----AAAAA----GGG........................................................................................................................................................................................................2450.201001000
..............................GGAGA---TAGCC----AAAAA----GGGTATGC...................................................................................................................................................................................................2350.201000010
............................CCGGAGA---TAGCC----AAAAA----G..........................................................................................................................................................................................................1850.201010000
............................CCGGAGA---TAGCC----AAAAA----GGGTATGCC..................................................................................................................................................................................................2650.201010000
..........................TGCCGGAGA---TAGCC----AAAAA----GGGTATGC...................................................................................................................................................................................................2750.201010000
.............................CGGAGA---TAGCC----AAAAA----GGGTATG....................................................................................................................................................................................................2350.201100000
......................................TAGCC----AAAAA----GGGTATGCTTCC...............................................................................................................................................................................................2250.201010000
.........................CTGCCGGAGA---TAGCC----AAAAA----GGGTATGC...................................................................................................................................................................................................2850.201010000
........................ACTGCCGGAGA---TAGCC----AAAAA----G..........................................................................................................................................................................................................2250.201100000
..............................GGAGA---TAGCC----AAAAA----GGGTAT.....................................................................................................................................................................................................2150.201010000
..........................TGCCGGAGA---TAGCC----AAAAA----GGGTATG....................................................................................................................................................................................................2650.201100000
..........................TGCCGGAGA---TAGCC----AAAAA----GGGTATGCT..................................................................................................................................................................................................2850.201010000
...............................................AAAAA----GGGTATGCTTCTTGGGC..........................................................................................................................................................................................22200.204004000
......................................TAGCC----AAAAA----GGGTATGCTTCT...............................................................................................................................................................................................2250.201001000
...............................GAGA---TAGCC----AAAAA----GGGTATGC...................................................................................................................................................................................................2250.201001000
..................................A---TAGCC----AAAAA----GGGTATGCTTCTTT.............................................................................................................................................................................................2550.201010000
.........................CTGCCGGAGA---TAGCC----AAAAA----G..........................................................................................................................................................................................................2150.201100000
......................................TAGCC----AAAAA----GGGTATGCTTC................................................................................................................................................................................................2150.201001000
..................................A---TAGCC----AAAAA----GGGTATGCTTCTC..............................................................................................................................................................................................2450.201100000
...........................GCCGGAGA---TAGCC----AAAAA----GGGTAC.....................................................................................................................................................................................................2450.201010000
..................................A---TAGCC----AAAAA----GGGTATGCTTCTTTT............................................................................................................................................................................................2650.201010000
............................CCGGAGA---TAGCC----AAAAA----GGGTATTT...................................................................................................................................................................................................2550.201100000
.............................................................................AACTATCTTTGGATGGACAGTGTCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------27100.202100010
...........................GCCGGAGA---TAGCC----AAAAA----GGGTA......................................................................................................................................................................................................2350.201010000
................................................................................TATCTTTGGATGGACAGTGTCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------24110.182200000
..................................A---TAGCC----AAAAA----GGGTATGCTC.................................................................................................................................................................................................2160.171010000
.....................................................................GGGCA-AAAACTATCTTTGGATGG......................................................................................................................................................................2370.141010000
........................................................................CA-AAAACTATCTTTGGATGGA.....................................................................................................................................................................2170.141010000
.......................................................................GCA-AAAACTATCTTTGGATGGACAGTA................................................................................................................................................................2770.141100000
....................................................................TGGGCA-AAAACTATCTTTGGATGGA.....................................................................................................................................................................2570.141010000
...................................................................TTGGGCA-AAAACTATCTTTGGATGGACAG..................................................................................................................................................................2970.141100000
..................................................................CTTGGGCA-AAAACTATCTTTGGATGG......................................................................................................................................................................2670.141001000
..................................................AA----GGGTATGCTTCTTGGGCA-AAAACTA.................................................................................................................................................................................2770.141100000
...........................GCCGGAGA---TAGCC----AAAAA----GGGC.......................................................................................................................................................................................................2270.141010000
................................................................TTCTTGGGCA-AAAACTATCTTTGGATG.......................................................................................................................................................................2770.141100000
.................................................................TCTTGGGCA-AAAACTATCTTTGGATGGA.....................................................................................................................................................................2870.141010000
................................................................TTCTTGGGCA-AAAACTATCTTTGGAT........................................................................................................................................................................2680.131010000
.................................................................TCTTGGGCA-AAAACTATCTTTGG..........................................................................................................................................................................2380.131010000
...................................................................TTGGGCA-AAAACTATCTTTGG..........................................................................................................................................................................2180.131100000
..................................................................CTTGGGCA-AAAACTATCTTTGGA.........................................................................................................................................................................2380.131100000
............................................................ATGCTTCTTGGGCA-AAAACTATC...............................................................................................................................................................................2380.131010000
.........................CTGCCGGAGA---TAGCC----AAAAA----GGGTTG.....................................................................................................................................................................................................2680.131100000
.................................................................TCTTGGGCA-AAAACTATCTT.............................................................................................................................................................................2080.131010000
...................................................A----GGGTATGCTTCTTGGGCA-AAAACT..................................................................................................................................................................................2580.131100000
.........................................................GGTATGCTTCTTGGGCA-AAAAC...................................................................................................................................................................................2290.111010000
..............................................................................ACTATCTTTGGATGGACAGTGTCC.............................................................................................................................................................24110.091010000
.................................................................................ATCTTTGGATGGACAGTGTCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------23190.051100000
.................................................AAA----GGGTATGCTTCTTGGGCA-AAG.....................................................................................................................................................................................24200.051100000
...................................................A----GGGTATGCTTCTTGGGC..........................................................................................................................................................................................18200.051010000
...........................................................................AAAACTATCTTTGGATGGACAGTGTC..............................................................................................................................................................26200.051001000
...............................................AAAAA----GGGTATGCTTCTTGGGCA-........................................................................................................................................................................................23200.051010000
...............................................AAAAA----GGGTATGCTTCTTGGG...........................................................................................................................................................................................21200.051010000
................................................AAAA----GGGTATGCTTCTTGGGC..........................................................................................................................................................................................21200.051010000
droBip1
AGCGGACATTCTTCCGTCCATTCTCCTCAGTAATG-CCAAGCCTAACATATG----CGGGTCGCTTCTCGGTCAGGAGACCATTTTTGGATGGGTGCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGCCGATATCCTGCCATCGATCCTCCTAAGCGGCT-CCCATTCCAATATTTG----TGGAACACTCCTGGGTCAAGAGACCATATTCGGGTGGATTCTTTGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGCTGATATATTGCCATCCGTGCTGCTGAGCGGAA-CAAGAACAAATATTTG----CGGCTCTCTTCTCGGTCAAGAAACCATTTTCGGTTGGGTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGCCGACATTCTGCCTTCGGTTCTCCTAAATGGGG-CAAAAACAAACATCTG----TGGCTCCCTCCTTGGACAAGAAACAATTTTCGGGTGGGTGCTCACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AGCTGATATCCTTCCATCCGTGCTGCTGAGCGGTA-CAAAGACCAACATCTG----CGGATCTCTTTTTGGGCAATAGACCATCTTCGGGTGGGTGCTCTTTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AGCCGACATTCTGCCTTCGGTTCTCCTAAATGGGG-CAAAAACAAACATCTG----TGGCTCCCTCCTTGGACAAGAAACAATTTTCGGGTGGGTGCTCACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGCTGACATTCTTCCATCCATTTTCCTCGGTAATT-CCAGGGCTAACATCTG----CTGGTCACTTCTCGGTCAGGAAACCATTTTTGGATGGGTGCTG----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AGCCGACATCCTGCCTTCGGTGCTTCTGAGTGGAG-CAAAAACCAACATCTG----TGGCTCTCTCTTGGGGCAAGAGACCATTTTCGGCTGGGTACTAACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................AAAACCAACATCTG----TGGCTCTCTC.................................................................................................................................................................................................242025.855170000000000000000000000000000000000000100000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000020003000000000000015600017601690000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTGGGGCAAGAGACCATTTTCGGC.........................................................................................................................................................................242018.103620000000000000000000000080000000000002050030000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000690026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271130000000
......................................AAAACCAACATCTG----TGGCTCTCTCT................................................................................................................................................................................................25207.251450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000001075000000000000000000000001190000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000
......................................AAAACCAACATCTG----TGGCTCTCT..................................................................................................................................................................................................23207.00140000000000000000000000000000000000000000030000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020002000000000000000000000000000000000000000000000000000000000000000000000000099003200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTGGGGCAAGAGACCATTTTCGG..........................................................................................................................................................................23204.5090000000000000000000000000000000000000000070000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060700000000000000000000000000000000000000000000000000107000022000000220000000010019000000000000000000000000000000000000000000000000000000000000000001005000000000000000000000000000800000000
...................................................................TGGGGCAAGAGACCATTTTCGGC.........................................................................................................................................................................23203.9579000000000000000000000000000000000000000000000000010001000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000040000030000000000000000000000000000000000000000000030000000000000000000001110900000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000083500000000
..................................................TG----TGGCTCTCTCTTGGGGCAAGAGA....................................................................................................................................................................................25203.006000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000005000000000000000000000000000000000000000000000500000000300090000007000040000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000004000000000
..................................................TG----TGGCTCTCTCTTGGGGCAAGAG.....................................................................................................................................................................................24202.9058000000000000000000000000000000000000200000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000060000001000000100051400001900010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GACCATTTTCGGCTGGGTACTAAC..............................................................................................................................................................24202.805600000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000030057010000800000010001840200000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
................................................................................CATTTTCGGCTGGGTACTAACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------25202.404800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000100000000100000250000000000000000000000000000000000000000000000000000000000000000000234000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CATTTTCGGCTGGGTACTAACTGG...........................................................................................................................................................24202.404800000000000000000000000000000000000000000010000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000002050000000000000000000000000000000000000000010500001030010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000040000000
....................................................................................TTCGGCTGGGTACTAACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------21202.204400000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000030000004000040000000100000000000000000000000000000000000000000000000000000000000000000002107300000000000000000000000000000000000000000000000000000000000001000000000000001430000000000000000000000000
..................................................TG----TGGCTCTCTCTTGGGGCAAGAGAC...................................................................................................................................................................................26202.204400000000000000000000031000000000000000300000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000070000000000000000000000000000000000000000000000000000000060000000000001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........TGCCTTCGGTGCTTCTGAGTGGAG-C..............................................................................................................................................................................................................................25202.004000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001070000000000000000000000000000000000000000000000000000000000000000000080030000170000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...................................................................TGGGGCAAGAGACCATTTTCGGCTGG......................................................................................................................................................................26201.903800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000101000003000000000000000000000000000000000000000000000000000000900000000000500500000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000010000000
...............TTCGGTGCTTCTGAGTGGAG-C..............................................................................................................................................................................................................................21201.603200000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000019000010200000000000000000000000000000000000000000000000000000000000000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAAACCAACATCTG----TGGCTCTC...................................................................................................................................................................................................22201.5531000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000003004000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TCCTGCCTTCGGTGCTTCTGAGTGG..................................................................................................................................................................................................................................25201.50300000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007400000000200000000000300000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000300000000700000000000000000000000000
...........TGCCTTCGGTGCTTCTGAGTGGAG-CA.............................................................................................................................................................................................................................26201.452900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000718000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
..............................TGGAG-CAAAAACCAACATCTG----TGGC.......................................................................................................................................................................................................25201.402800000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501400600000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................CAAGAGACCATTTTCGGCTGGGT....................................................................................................................................................................23201.35270000000000000000000000000000000000000000000000000100400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050070000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000800000000000000000000000000
...................................................................TGGGGCAAGAGACCATTTTCGGCTGGG.....................................................................................................................................................................27201.252500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000100200000000000000000000000000000000000000006000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TGGGGCAAGAGACCATTTTCGG..........................................................................................................................................................................22201.202400000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000003000000000000000000000000000000000000000000000000000000000000000016002000000000000000000000000000000000000000
...................................................................TGGGGCAAGAGACCATTTTCGGCT........................................................................................................................................................................24201.20240000000000000000000000000000000000000000000002000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000090000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000008
..................................................................TTGGGGCAAGAGACCATTTTCGGCTG.......................................................................................................................................................................26201.202400000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000000000000000000000000000000000000000000000000000000000200200000000000016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTCGGTGCTTCTGAGTGGAG-...............................................................................................................................................................................................................................20201.15230000000000000000000000000000000000000040000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110005000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000040000000
........TCCTGCCTTCGGTGCTTCTGAGTG...................................................................................................................................................................................................................................24201.152300000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000001000002000000000000000000001400000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGACATCCTGCCTTCGGTGCTT..........................................................................................................................................................................................................................................22201.152300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000600000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGCCTTCGGTGCTTCTGAGTGGAG-...............................................................................................................................................................................................................................24201.152300000000000000000000000000000000000000000000220000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000120000001000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................AACATCTG----TGGCTCTCTCTTGGGGC..........................................................................................................................................................................................25201.10220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000100000000000000000000000000000000000000000000000000000000100000000000000000004020800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGCCTTCGGTGCTTCTGAGTGGAG-CAAA...........................................................................................................................................................................................................................28201.05210000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000080310100000000000000000000000000000000000000000100000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................TTTTCGGCTGGGTACTAACTGGG----------------------------------------------------------------------------------------------------------------------------------------------------------23200.95190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300006000000100000000000000000000000000000000000000100000000000000000000000000050010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................TG----TGGCTCTCTCTTGGGGCAAGA......................................................................................................................................................................................23200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000002000030000000000000000000000000000000000000000000000000000030000000004000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................CAAGAGACCATTTTCGGCTGGGTAC..................................................................................................................................................................25200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000001000100000000100000300000000000000000000000000000000000000000000001000000000000000000000000500000000000000000000000000000000000000000000000000000000000001000000002000000000000000000000000000000000
.........................................................................AAGAGACCATTTTCGGCTGGG.....................................................................................................................................................................21200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010030002000000000000000000000000000000000000000000000000300000000000000000503000000000000000000000000000000000
.............................GTGGAG-CAAAAACCAACATCTG----TGG........................................................................................................................................................................................................25200.80160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000940000000000000000000000000
...........TGCCTTCGGTGCTTCTGAGTGG..................................................................................................................................................................................................................................22200.80160000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000002000000200000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000
...................................................................TGGGGCAAGAGACCATTTTCGGCTGGA.....................................................................................................................................................................27200.801600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016
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...............TTCGGTGCTTCTGAGTGGAA-A..............................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AAAAACCAACATCTG----TGGCTCTCTC.................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GAGACCATTTTCGGCTGGGTACTAA...............................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTGGGGCAAGAGACCATTTTCGGCAAT......................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
.......................................AAACCAACATCTG----TGGCTCT....................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTGGGGCAAGAGACCATTTTCGGCTGGG.....................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGGAG-CAAAAACCAACATCTG----TG.........................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TGCTTCTGAGTGGAG-CAAAAACCAACA...................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGGAG-CAAAAACCAACATCTG----TGGCT......................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AGACCATTTTCGGCTGGGTAC..................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TCTTGGGGCAAGAGACCATTTTCGT..........................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000
............GCCTTCGGTGCTTCTGAGTGGAG-CAAA...........................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CAACATCTG----TGGCTCTCTCTT...............................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GGGGCAAGAGACCATTTTCGGCTG.......................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TCCTGCCTTCGGTGCTTCTGAGTGGT.................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CTGAGTGGAG-CAAAAACCAACA...................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..........................................................................AGAGACCATTTTCGGCTGGG.....................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................TTGGGGCAAGAGACCATTTTAAA..........................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............TTCGGTGCTTCTGAGTGGAG-T..............................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................................................GACCATTTTCGGCTGGGTACTAACTA............................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CATCTG----TGGCTCTCTCTTGGGGCA.........................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AACATCTG----TGGCTCTCTCTTGGGGCAAA.......................................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCTCTCTTGGGGCAAGAGACCATT...............................................................................................................................................................................24200.1020000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGACATCCTGCCTTCGGTGCTTCTG.......................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCTCTCTTGGGGCAAGAGACCATTTTCG...........................................................................................................................................................................28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TGGGGCAAGAGACCATTTTCG...........................................................................................................................................................................21200.1020000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGGTGCTTCTGAGTGGAA-A..............................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTCGGTGCTTCTGAGTGGAA-T..............................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CGGTGCTTCTGAGTGGAG-CAAAAAC........................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACCAACATCTG----TGGCTCTCTCTTGG.............................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSec2
TATGGATCTATTTCCCCTGATTATGATGGAGAAAA--------TAAAAACTGTGAATGG---AATCTTGGGACTAAAAACCAGATTTGGATGGATTGTGTCCGGG----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................ATGG---AATCTTGGGACTAAAAA....................................................................................................................................................................................2120.5010001
............................................AAAAACTGTGAATGG---AATCTTG..............................................................................................................................................................................................2240.2511000
..........................................................................AAAAACCAGATTTGGATGGAT....................................................................................................................................................................21170.0610010
................................................................................CAGATTTGGATGGATTGTGTC..............................................................................................................................................................21200.0511000
....GATCTATTTCCCCTGATTATGATGGAG....................................................................................................................................................................................................................................27200.0511000
.......CTATTTCCCCTGATTATGATGGA.....................................................................................................................................................................................................................................23200.0511000
droYak3
TGTGGATCTATTTCCCCTGATTATGATGGAGAAAA--------TAAAAACCGTGAATGG---AATCTTGGGACAAAAAACCAAATTTGGATGGATTGTGTCCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................AAAAACCGTGAATGG---AATCTTGGGAC..........................................................................................................................................................................................26200.10200000000002
.GTGGATCTATTTCCCCTGATTATGA.........................................................................................................................................................................................................................................25200.05101000000000
TGTGGATCTATTTCCCCTGATTAT...........................................................................................................................................................................................................................................24200.05101000000000
....................................................................GGGACAAAAAACCAAATTTGGATGGAT....................................................................................................................................................................27200.05101000000000
...................................................................TGGGACAAAAAACCAAATTTGGATGG......................................................................................................................................................................26200.05101000000000
TGTGGATCTATTTCCCCTGATTATGA.........................................................................................................................................................................................................................................26200.05101000000000
TGTGGATCTATTTCCCCTGATT.............................................................................................................................................................................................................................................22200.05101000000000
...................................................................TGGGACAAAAAACCAAATTTGGATG.......................................................................................................................................................................25200.05101000000000
droEre2
TGTGGATCTATTTCCCCTGATTATGTTGGAGAAAA-TAAAAACC-------GTAAATGG---AATCTTGGGACGAAAAACCAAATTTGGATGGATTGTGTGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................AAACC-------GTAAATGG---AATCTTGGG............................................................................................................................................................................................22200.0510000010
..........................................................................AAAAACCAAATTTGGATGG......................................................................................................................................................................19200.0510000010

Generated: 05/18/2015 at 03:49 AM