ID:

dwi_2271

 Coordinate:

scf2_1100000004837:928543-928790 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-43.7 -43.6 -43.6

Flybase annnotation

CDS [Dwil\GK23895-cds]; exon [dwil_GLEANR_785:1]; CDS [Dwil\GK23895-cds]; exon [dwil_GLEANR_785:2]; intron [Dwil\GK23895-in]

No Repeatable elements found

Sense Strand Reads

--------------------------------##################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTCAAATCTTTTATACAACAAACTTAAACCAAATGGCGTTTCTCAATAAGGTAAGCCAGCGATATAAAAAAAGAGAGACAGAGAAAGTGATTTTGGAAGAAGGAGGGTCCAAAGTTCTCGAATCTGATATCAATGACGACAGCAAAACTGTTGATCATCTTGGGCAGACATTTTTGTAGCGATTTCGTAAACAGATTCTGTTATCTTCTCGATTGCGTACTTTGACCCCTTTTCATTTTGCACTTGAATTTGTGATTTTTGATTATAAAGAGTTTTTTGACTTGGTTTCTTTTTTTAGCTAGCCGCACCGGCTATCCGTCAATTGGTGGCCAGCCGATCATATGCTGC
*************************************************************************************........((((((((((((((((.(((((..((((....((((...((((((((((.....)))))).)))).....(((((....(((((.(((....)))..))))).)))))))))...))))......))))))))))...((((.........))))(((((((((...)))))))))(((((....)))))...)))))))))))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 V118
embryo
 M045
female body
 V119
head
 M020
head
.........................................................................................................................................................................................................................................................................................................................ATCCGTCAATTGGTGGCCAGC.............. 21 0 1 3.00 3 0 2 0 1 0
.........................................................................................................................................................................................................................................................................................................................ATCCGTCAATTGGTGGCCAGCC............. 22 0 1 2.00 2 1 1 0 0 0
............ATACAACAAACTTAAACCAAATGGCGT..................................................................................................................................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................ATCCGTCAATTGGTGGCCAGCCGATC......... 26 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................................................................................................................................TCAATTGGTGGCCAGCCGAT.......... 20 0 1 1.00 1 0 1 0 0 0
....................AACTTAAACCAAATGGCGTTTCTCA............................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.....................................................................................AGTGATTTTGGAAGAAGGAGGGT................................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
............ATACAACAAACTTAAACCAAATGG........................................................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.............................................ATCAGGTCAGCCAGCGATAT........................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................................TTGACTTGGTTTCTTTTTTTA................................................... 21 0 1 1.00 1 0 0 1 0 0
......................CTTAAACCAAATGGCGTTTCT................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................................................GATTATAAAGAGTTTTTTGACT.................................................................. 22 0 1 1.00 1 0 1 0 0 0
.............................................................................................TGGAAGAAGGAGGGTCCAAAGTTCTC..................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
...................AAACTTAAACCAAATGGCGTTTC.................................................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0
........................................................................................................................AATCTGATATCGATGACG.................................................................................................................................................................................................................. 18 1 1 1.00 1 0 1 0 0 0
...............................................................ATAAAAAAAGAGAGACAGAGAAAGT.................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0
.................................TGGCGTTTCTCAATAAGGTAA...................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
.................ACAAACCTAAACCAAATGGCGT..................................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
.........................AAACCAAATGGCGTTTCTCAATAAGCT........................................................................................................................................................................................................................................................................................................ 27 1 1 1.00 1 0 0 1 0 0
.....................................................................................................................................................................................................CTTTGATCTTCTCGATTGC.................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 1
............................................GATCAGGTCAGCCAGCGATA............................................................................................................................................................................................................................................................................................ 20 3 6 0.17 1 0 0 1 0 0
.....................................TTTTCTCAATAAGGCACGCC................................................................................................................................................................................................................................................................................................... 20 3 11 0.09 1 0 0 1 0 0
..................................................................................................................................................ACTGTTGATCTGCTTGAGCA...................................................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0 0
.............................................................ATATAAAAGTAGAGAGACATAG......................................................................................................................................................................................................................................................................... 22 3 14 0.07 1 0 1 0 0 0

Anti-sense strand reads

AAGTTTAGAAAATATGTTGTTTGAATTTGGTTTACCGCAAAGAGTTATTCCATTCGGTCGCTATATTTTTTTCTCTCTGTCTCTTTCACTAAAACCTTCTTCCTCCCAGGTTTCAAGAGCTTAGACTATAGTTACTGCTGTCGTTTTGACAACTAGTAGAACCCGTCTGTAAAAACATCGCTAAAGCATTTGTCTAAGACAATAGAAGAGCTAACGCATGAAACTGGGGAAAAGTAAAACGTGAACTTAAACACTAAAAACTAATATTTCTCAAAAAACTGAACCAAAGAAAAAAATCGATCGGCGTGGCCGATAGGCAGTTAACCACCGGTCGGCTAGTATACGACG
***************************************************........((((((((((((((((.(((((..((((....((((...((((((((((.....)))))).)))).....(((((....(((((.(((....)))..))))).)))))))))...))))......))))))))))...((((.........))))(((((((((...)))))))))(((((....)))))...)))))))))))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M020
head
 M045
female body
...................................................................................................TTCCTCCCAGGTTTCAAGAGC.................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0
.....................................................................................................CCTCCCAGGTTTCAAGAGCTTAGACTAT........................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1
.....................................................TCAGTCGCTATATTTCGTTC................................................................................................................................................................................................................................................................................... 20 3 16 0.06 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004837:928493-928840 - dwi_2271 TTCAAATCTTTTATACAACAAAC----------TT----------------------A--AACCAAATGGCGTTTCTCAATAAGGTAAGCC------------AGCGATATAA----------AAAAAG---AGAGACAGAGAAAG------TGATTT------T-----------------------GGAAGAAGGAGGGTCCAAAGTTCTCGAATCTGA--TATCAATGACGACAGCAAAACTGTTGATCATCTTGGGCAGACATTT---------------------------------------------------------------TTGTA--G-----------CGATTTCGTAAACAGAT------TCTGT-T-ATCTTCTCGA---------TT-GCGTACTTTGACCCCT-TTT---------------------------------------------------------------------CATTTTGCACTTGAATTTG--TGATTTTTGATTATAAAGAGTTTTTTGACTTGGTTTCTT-------TTTTTAGCTAGCCGCACCGGCTATCCGTCAATTGGTGGCC---AGCCGATCATATGCTGC
droVir3 scaffold_12420:1581-1866 - dvi_958 AA--------------ATTTTGCAATAACTAAATAATATTTTA--------------T-CTGCGCCATGGCTTTTCTCAACAAGGTATGTATCAAGTG-----GGCCAAATTATCTTGCAA--C--TCC---ACAGAGAGTGCCA-------------------------------------------------------------------------------------------------------GATCATCT--GGCAGACATTTTGAAAAA-------------------------ACG------------------------------------------------------GTGCACAGATTAT------G--C-TGCTTATCTGA------TGCGATTGTACTTTGCCCCCG-ATT-GGA-----------------CTTATGGACCCA--CGGAATTCCGCATTTAATTGTGTC--------------------------------GT-------------------A-------------------TTTGCTTGTAGCTCGCAGCTCCTGCACTGCGACAGCTGGTGGCC---AGCCGCACATATGCCGC
droMoj3 scaffold_6680:7112636-7112850 - CA--------------ATGACAG----------CC----------------------G-CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCATTG--GGCAGACATTTTGAAA-T-------------------------GCGTTTGAA-----------A-GAGAGATA--------G-----------AGATTTT----TCAGATTAT-------T-T-CTCTTATCTGT------CGTGTTTGTACTTTGCCCCTTGGTT-GGA-----------------CTTGTGAACCCACACGGAATTCCGAGACTAATTATTTT-----------------------------------------------------G-------------------TTTGCTTGTAGCTCGCAGTTCCTGCTATACGTCAGCTGGCCGCC---AGCCGGTGCTACGCTGC
droGri2 scaffold_15110:17064417-17064738 - TAGAAA----------T----------------TTTTCATATAATTTGAACAATTT-T-CAAAGTCATGGCGTTTCTCAATAAGGTAAAAG-AAA---------------------------------------------AGAAAA---------------------------------------------------------------------------------------GTAACCAG--CTGTTGATCGATGT-GGAAGACATTTTAAAAATAATAAAATAAGAAATAGCAGCACTAGCGT------------------------------------------------ATTTT----TTCGACTATGCTTCT---G-TTCTTATCGGC------GTTTGTTGTACTTTGAACCCA-GTT-GGA-----------------CCTGTGGACTTTAATGAGTTGTTATGACCAAATACTTAAATGAAAATACATTTTGCAAT-------------------------------TA-------------------TTTGTTTTTAGCTTGCAGCGCCTGCATTGCGACAGCTGGTTGCC---AGTCGTTCATATGCAGC
dp5 XR_group6:1720296-1720659 + TACGGA----------A----------------TTAGAGTCCG-------------CA-TAGACCAATGGCGTTCCTCAATAAGGTGAGAG-CAGATG-----AGCAGACTTTCCACGATCCCTACCAG---AGGGAAAGTCCAAG------GT--------------------------------G-------TAGGAGGTGCAAAGTTCTC-----ATA--ATCCGATGACGCCAGCAAATTTGTTGATCGTCTGCA----------------------------------------------------------------------------------------------------TAAACAGAT------TTTTT-T-CTCTTATCTGT------TCATCGTGTACTTTGCCCCCC-CTATGCGATTATTAATAGCACCGTTTTATGGAGC-------------------------AG------------CTTTTGCACTTGAATTGGATCGGAATCTGGTTATCAAACGTTGTTTG---TGCTCTCTCTCTCTCTCCTGAAGATTGCAGCGCCAGCCCTGCGCCAGCTGGTGTCCCACAGTCGGTCCTATGCCGC
droPer2 scaffold_9:13086-13449 + TACGGA----------A----------------TTAGAGTCCG-------------CA-TAGACCAATGGCGTTCCTCAATAAGGTGAGAG-CAGATG-----AGCAGACTTTCCACGATCCCTACCAG---AGGGAAAGTCCAAG------GT--------------------------------G-------TAGGAGGTGCAAAGTTCTC-----ATA--ATCCGATGACGCCAGCAAATTTGTTGATCGTCTGCA----------------------------------------------------------------------------------------------------TAAACAGAT------TTTTT-T-CTCTTATCTGT------TCATCGTGTACTTTGCCCCCC-CTATGCGATTATTAATAGCACCGTTTTATGGAGC-------------------------AG------------CTTTTGCACTTGAATTGGATCGGAATCTGGTTATCAAACGTTGTTTG---TGCTCTCTCTCTCTCTCCTGCAGATTGCAGCGCCAGCCCTGCGCCAGCTGGTGTCCCACAGTCGGTCCTATGCCGC
droAna3 scaffold_13337:16505553-16505779 + GA------------------------------------------------------------CCCAATGGCGTTCCTCAACAAGGTGAGCA---TAGC-----AGTACCCCTA----------CTGCCC--AGGAGAAAGTGACAAA-----AAAAAA-----------CAGA-------TT--ATG-------TGGGAGGGTCAAAGTCCTA-----TCA--TGCCAGTGACGACAGCAA--CTGTTGATCGTATATA------------------------------------------TAGACTT-----------ATAT-------ATTCATGAGGCTGTGTG-----GGTTTCGTAAACACTT------TTGTTTTTTGGTTATCTGCG-ACACTAATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396641:32032-32278 + AT--------------ACTATAA----------CCACAAT-------------------TCACCCAATGGCGTTCCTCAACAAGGTGAGCA---TACC-----AGTTACCCTA----------CTCTGCCCAAGAGAAAGTGAAAA------AAAAAGC-----------ATA-------TT--ATG-------TGGAAGG-TCAAAGTCCTA-----ACA--GTCTAGTGACGACAACAA--CTGTTGATCGTATATAT-------------A-T-------------------------ATAGTTT-----------ATAT-------ATTTATGAGGCTGTGTGG-----GTTTCGTAAACACTT------TTATTTTTTGGTTATCTGCG-ACACTAATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302274:31216-31351 + AT-----------------AAAA----------CTATAAT-------------------AAAACCAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTTAAATTG----------CGCAG----AGAGAAAGTGAATA------AAAAACC-------------------------A--TTTG------GGGGTTCAAAGTTCTG-----T------CTAGTGACGCCAGCAG--CTGTTGATCGTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454065:30251-30477 + AA----------------TAAAC----------CC----------------------A-CAACCCAATGGCGTTCCTCAACAAGGTGAGCA---TAACATATTAGTTAGTTAA----------AACGAC---GGAGAAAGTGAAAA------ACATATCACAGT-GACATACA-----GAAA--ATG-------CGGAAGGTTCAAAGTCCTC-----TCA--GTTCTGTGACGACAGCAA--CTGTCGATCGTCTGAAA-------------A-T-------------------------TAGGTTT-----------ATA-CATACATACTTATA--ATCGAGTGGGTTCAGTTTCGTAAACACAT------TTGTTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491193:2971363-2971642 + AA--------------AATAAAC----------CC----------------------A-TAACCCAATGGCGTTCCTTAACAAGGTGAGCA---TATC-----GTTTAATTTA----------TACCGC---AGAGAAAGTGAAAC------ACACAACGC---AAAGATAATTTATAACAT--A--TGAAAAATGGATGGTTCAAAGTTCTC-----TAA--GACTAGTGACGACAACAA--CTGTTGATCGTCCGCGA-------------T-T-------------------------AAGGTTTGCACATATATA-TA-TATATATATGTATG--TACGAGTGGGTTCCGTTTCGTAAACACAT------TTGTTGT-TGCCTGTCTGCCAGCAATCATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780039:71795-72060 - AA--------------AATAAAC----------CC----------------------A-TAACCCAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----GGTTAATTTA----------TTCCGC---GCATAAAGTGAAAA------ACAAAACCTAACGCACAGATA-----AAATAAA--TGAAAAGAGGAGGGTTCAAAGTTCTC-----TCA--GATTAGTGACGACAGCAA--CTGTTGATCGTCTGCGA-------------A-T-------------------------TAGGTTT-----------ATAT-GT----ACATATA--TACAAGTGGGTTCCGTTTCGTAAACATAT------TTGTTGT-TGCCTATCTGCCAGCAATCATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302428:32127-32451 + AA--------------AATAAAC----------CC------------------------CAAGCCAATGGCGTTCCTCAACAAGGTGAGCA---TA--------GTTAGTTTA----------AGCCGC---GGTGAAAGTGAAAA------ACACATCAGAAC-CACATATA-----CTGT--G--TACG------AAGGTTCGAAGTTCTC-----GCA--GATTGGTGACGACAGCAA--CTGTTGATCGTCTGGGA-------------T-T-------------------------TGGCTTCAA-----------A-CAAACATACATATA--ATCGAGTGGGTTCCGTTTCGTAAACACAT------TTGTTGT-TGCCCATCTGC-GGCAATCATC-TGTACTTTGCCCCCC-TCGGAAAATTATTATTAGCGGCGTCTAATGGC---------------------------GGC--------TTGTTTTTGCACTCGA----------------------------------------TTCACT-------TTATTGGCAGGC-----------------------------------------------C
droTak1 scf7180000415352:35662-35911 + AA--------------AATAAAC----------CC----------------------A-TAGCCCAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTTAGTTTA----------TACCGC---GGAGAAAGTGAAAA------ACACAGCCC---AGAGATATA-------TT--ATTTGC-------GAGGTTCAAAGTTCTC-----TTA--GATTAGTGACGACAGCAA--CTGTTGATCGTCTGCGA-------------T-T-------------------------TAGGTTT-----------ATA---------CATATA--TTCGAGTGGGTTCCGTTTCGTAAACACAT------TTGTTGT-TGCCTATCTGCCAGCAATCATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409524:929306-929566 - AA--------------------C----------CC-------A-------------CA--AACCCAATGGCGTTCCTCAACAAGGTAGGCA---TATC-----ATTTAATTTA----------TAAAGC---GGTGAAAGTGAAAA------ATAAATAAG--------TCTA-----TAAA--A--TGCG------AGGGTTCAAAGTTCTC-----TCACAGATTAGTGACGACAGCAA--CTGTTGATCGTCTGCGA-------------A-T-------------------------TAGGTTTACGTATATATG-TA-CATACATATCTATA--TACGAGTGGGTTCCGTTTCGTAAACACAT------TTGTTGT-TGCTTATCTGCCAGCAATCATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:7712521-7712673 + AA--------------AATAAAC----------CC----------------------A-CATTCAAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTCAATTTA----------CAACGC---AGAGAAAGTGAAAA------ACACATCGC---TGGGACATA-----TCAT--A--TCCA------AAGGTCCAAAGTTCTA-----TCA--CGCTAGTGACGACAGCAA--CTGTTGATCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:7549936-7550088 + AA--------------AATAAAC----------CC----------------------A-CATTCAAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTTAGTTTA----------CAAAGC---AGAGAAAGTGAAAA------ACACATAGC---TGGCAGATA-----TCAT--A--TCCA------AAGATCCAAAGTTCTA-----TCG--CACTAGTGACGACAGCAA--CTGTTGATCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_0:25676-25822 + GA--------------------C----------CC-------A-------------CATTCATCAAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTTAGTTTA----------CAATGC---AGAGAAATTGAAAA------ACACATAGC---TGGCAGATA-----TCAT--A--CCCA------AAGATCCAAAGTTCTA-----T------CTAGTGACGACAGCAA--CTGTTGATCGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:8309718-8309876 + AA--------------AATAAAC----------CC----------------------A-TATTCAGATGGCGTTCCTCAACAAGGTGAGCA---TATT-----AGTTGATTTA----------CAACGC---AGCGAAAGTGAAATTAACATATACATAGC---TCAGACATA-----TCCT--A--TCCG------AAAGTTTAAAGTTCTA-----TCA--CTCTAGTGACGACAGCAA--CTGTTGATCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:3636005-3636144 - C---------------------------------------------------------------AAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----GGTTAGTTTA----------CAACAAAAGAGAGAAAGTGAAAA------ACACACAGC---TGG-GTATA-----TCCT--A--TCCG------AAAGTATAAAGTTCTA-----TCA--CGCTAGTGACGACAGCAA--CTGTTGATCGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TTCAAATCTTTTATACAACAAAC----------TT----------------------A--AACCAAATGGCGTTTCTCAATAAGGTAAGCC------------AGCGATATAA----------AAAAAG---AGAGACAGAGAAAG------TGATTT------T-----------------------GGAAGAAGGAGGGTCCAAAGTTCTCGAATCTGA--TATCAATGACGACAGCAAAACTGTTGATCATCTTGGGCAGACATTT---------------------------------------------------------------TTGTA--G-----------CGATTTCGTAAACAGAT------TCTGT-T-ATCTTCTCGA---------TT-GCGTACTTTGACCCCT-TTT---------------------------------------------------------------------CATTTTGCACTTGAATTTG--TGATTTTTGATTATAAAGAGTTTTTTGACTTGGTTTCTT-------TTTTTAGCTAGCCGCACCGGCTATCCGTCAATTGGTGGCC---AGCCGATCATATGCTGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTCAATTGGTGGCC---AGC..............2113.00300021
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTCAATTGGTGGCC---AGCC.............2212.00200110
............ATACAACAAAC----------TT----------------------A--AACCAAATGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200200
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGTCAATTGGTGGCC---AGCCGATC.........2611.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTGGTGGCC---AGCCGAT..........2011.00100010
....................AAC----------TT----------------------A--AACCAAATGGCGTTTCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
................................................................................................................................................AG------TGATTT------T-----------------------GGAAGAAGGAGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
............ATACAACAAAC----------TT----------------------A--AACCAAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTTGGTTTCTT-------TTTTTA......................................................2111.00101000
......................C----------TT----------------------A--AACCAAATGGCGTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTATAAAGAGTTTTTTGACT............................................................................2211.00100010
....................................................................................................................................................................T-----------------------GGAAGAAGGAGGGTCCAAAGTTCTC.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...................AAAC----------TT----------------------A--AACCAAATGGCGTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............................................................................................................ATAA----------AAAAAG---AGAGACAGAGAAAG------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
...................................................................TGGCGTTTCTCAATAAGGTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
droVir3
AA--------------ATTTTGCAATAACTAAATAATATTTTA--------------T-CTGCGCCATGGCTTTTCTCAACAAGGTATGTATCAAGTG-----GGCCAAATTATCTTGCAA--C--TCC---ACAGAGAGTGCCA-------------------------------------------------------------------------------------------------------GATCATCT--GGCAGACATTTTGAAAAA-------------------------ACG------------------------------------------------------GTGCACAGATTAT------G--C-TGCTTATCTGA------TGCGATTGTACTTTGCCCCCG-ATT-GGA-----------------CTTATGGACCCA--CGGAATTCCGCATTTAATTGTGTC--------------------------------GT-------------------A-------------------TTTGCTTGTAGCTCGCAGCTCCTGCACTGCGACAGCTGGTGGCC---AGCCGCACATATGCCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................TTTTA--------------T-CTGCGCCATGGCTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.002000000000000000010000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCTGCACTGCGACAGCTGGT........................2421.002000000000000001000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCTGCACTGCGACAG.............................1920.501001000000000000000000000000000000000000000000000000000000000000
................ATTTTGCAATAACTAAATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
...........................................................CTGCGCCATGGCTTTTCTCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000000000000010000000000000000000000000000000000000000000
.........................................TA--------------T-CTGCGCCATGGCTTTTCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501001000000000000000000000000000000000000000000000000000000000000
........................................TTA--------------T-CTGCGCCATGGCTTTTCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
................................................................................................TG-----GGCCAAATTATCTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000000000000001000000000000000000000000000000000000000000000
.........................................................................TTCTCAACAAGGTATGTATCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000000010000000000000000000000000000
.....................................ATTTTA--------------T-CTGCGCCATGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000000000000000001000000000000000000000000000000000000000000000
...............................AATAATATTTTA--------------T-CTGCGCCATGGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
.........................................TA--------------T-CTGCGCCATGGCTTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000001000000000000000000000000000000000000000000000000
..................................AATATTTTA--------------T-CTGCGCCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
...............................AATAATATTTTA--------------T-CTGCGCCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GATTAT------G--C-TGCTTATCTGA------T............................................................................................................................................................................................................................2020.501000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-GGA-----------------CTTATGGACCCA--CGGAAT...........................................................................................................................................................2420.501010000000000000000000000000000000000000000000000000000000000000
...............................AATAATATTTTA--------------T-CTGCGCCATGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501000000000000001000000000000000000000000000000000000000000000000
..........................................A--------------T-CTGCGCCATGGCTTTTCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCTGCACTGCGACAGCTGGTGGCC---.................2820.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
CA--------------ATGACAG----------CC----------------------G-CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATCATTG--GGCAGACATTTTGAAA-T-------------------------GCGTTTGAA-----------A-GAGAGATA--------G-----------AGATTTT----TCAGATTAT-------T-T-CTCTTATCTGT------CGTGTTTGTACTTTGCCCCTTGGTT-GGA-----------------CTTGTGAACCCACACGGAATTCCGAGACTAATTATTTT-----------------------------------------------------G-------------------TTTGCTTGTAGCTCGCAGTTCCTGCTATACGTCAGCTGGCCGCC---AGCCGGTGCTACGCTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGTTCCTGCTATACGTCAGC............................2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCGCC---AGCCGGTGCTACGCTG.2611.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGCTATACGTCAGCT...........................2011.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCC---AGCCGGTGCTACGCTGC2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................T-T-CTCTTATCTGT------CGTGTTT......................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGGCCGCC---AGCCGGTG.........1911.001100000
droGri2
TAGAAA----------T----------------TTTTCATATAATTTGAACAATTT-T-CAAAGTCATGGCGTTTCTCAATAAGGTAAAAG-AAA---------------------------------------------AGAAAA---------------------------------------------------------------------------------------GTAACCAG--CTGTTGATCGATGT-GGAAGACATTTTAAAAATAATAAAATAAGAAATAGCAGCACTAGCGT------------------------------------------------ATTTT----TTCGACTATGCTTCT---G-TTCTTATCGGC------GTTTGTTGTACTTTGAACCCA-GTT-GGA-----------------CCTGTGGACTTTAATGAGTTGTTATGACCAAATACTTAAATGAAAATACATTTTGCAAT-------------------------------TA-------------------TTTGTTTTTAGCTTGCAGCGCCTGCATTGCGACAGCTGGTTGCC---AGTCGTTCATATGCAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TACGGA----------A----------------TTAGAGTCCG-------------CA-TAGACCAATGGCGTTCCTCAATAAGGTGAGAG-CAGATG-----AGCAGACTTTCCACGATCCCTACCAG---AGGGAAAGTCCAAG------GT--------------------------------G-------TAGGAGGTGCAAAGTTCTC-----ATA--ATCCGATGACGCCAGCAAATTTGTTGATCGTCTGCA----------------------------------------------------------------------------------------------------TAAACAGAT------TTTTT-T-CTCTTATCTGT------TCATCGTGTACTTTGCCCCCC-CTATGCGATTATTAATAGCACCGTTTTATGGAGC-------------------------AG------------CTTTTGCACTTGAATTGGATCGGAATCTGGTTATCAAACGTTGTTTG---TGCTCTCTCTCTCTCTCCTGAAGATTGCAGCGCCAGCCCTGCGCCAGCTGGTGTCCCACAGTCGGTCCTATGCCGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................ACCAATGGCGTTCCTCAATAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCACTTGAATTGGATCGG.......................................................................................................2111.0010100000000
.............................................................GACCAATGGCGTTCCTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................AGTCCG-------------CA-TAGACCAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
....................................GAGTCCG-------------CA-TAGACCAATGGCGTTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
...........................................................................CTCAATAAGGTGAGAG-CAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................CCAGCAAATTTGTTGATCGTCTGCA----------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................CGTTCCTCAATAAGGTGAGAG-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...GGA----------A----------------TTAGAGTCCG-------------CA-TAGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................AAAGTCCAAG------GT--------------------------------G-------TAGGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................TCCAAG------GT--------------------------------G-------TAGGATC...................................................................................................................................................................................................................................................................................................................................................................................................................................16200.0510000000100
droPer2
TACGGA----------A----------------TTAGAGTCCG-------------CA-TAGACCAATGGCGTTCCTCAATAAGGTGAGAG-CAGATG-----AGCAGACTTTCCACGATCCCTACCAG---AGGGAAAGTCCAAG------GT--------------------------------G-------TAGGAGGTGCAAAGTTCTC-----ATA--ATCCGATGACGCCAGCAAATTTGTTGATCGTCTGCA----------------------------------------------------------------------------------------------------TAAACAGAT------TTTTT-T-CTCTTATCTGT------TCATCGTGTACTTTGCCCCCC-CTATGCGATTATTAATAGCACCGTTTTATGGAGC-------------------------AG------------CTTTTGCACTTGAATTGGATCGGAATCTGGTTATCAAACGTTGTTTG---TGCTCTCTCTCTCTCTCCTGCAGATTGCAGCGCCAGCCCTGCGCCAGCTGGTGTCCCACAGTCGGTCCTATGCCGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................GCAAATTTGTTGATCGTCT............................................................................................................................................................................................................................................................................................................................................................................1913.003300000
...............................................................................................................................................................................................................................................AAATTTGTTGATCGTCTGCA----------------------------------------------------------------------------------------------------TAAACAGA.............................................................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................T--------------------------------G-------TAGGAGGTGCAAAGTTCTC-----..................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.........................................................A-TAGACCAATGGCGTTCCTCAATAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...................................AGAGTCCG-------------CA-TAGACCAATGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATAGCACCGTTTTATGGA.......................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG---TGCTCTCTCTCTCTCTC...........................................................20120.081010000
droAna3
GA------------------------------------------------------------CCCAATGGCGTTCCTCAACAAGGTGAGCA---TAGC-----AGTACCCCTA----------CTGCCC--AGGAGAAAGTGACAAA-----AAAAAA-----------CAGA-------TT--ATG-------TGGGAGGGTCAAAGTCCTA-----TCA--TGCCAGTGACGACAGCAA--CTGTTGATCGTATATA------------------------------------------TAGACTT-----------ATAT-------ATTCATGAGGCTGTGTG-----GGTTTCGTAAACACTT------TTGTTTTTTGGTTATCTGCG-ACACTAATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................GAAAGTGACAAA-----AAAAAA-----------CC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
GA------------------------------------------------------------CCCAATGGCGTTCCTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................................AGGCTGTGTG-----GGTTTCGTA...................................................................................................................................................................................................................................................................1911.001000001
.................................................................AATGGCGTTCCTCAACAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................TTTTGGTTATCTGCG-ACACTAATC-T......................................................................................................................................................................................................................2511.001100000
droBip1
AT--------------ACTATAA----------CCACAAT-------------------TCACCCAATGGCGTTCCTCAACAAGGTGAGCA---TACC-----AGTTACCCTA----------CTCTGCCCAAGAGAAAGTGAAAA------AAAAAGC-----------ATA-------TT--ATG-------TGGAAGG-TCAAAGTCCTA-----ACA--GTCTAGTGACGACAACAA--CTGTTGATCGTATATAT-------------A-T-------------------------ATAGTTT-----------ATAT-------ATTTATGAGGCTGTGTGG-----GTTTCGTAAACACTT------TTATTTTTTGGTTATCTGCG-ACACTAATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AT-----------------AAAA----------CTATAAT-------------------AAAACCAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTTAAATTG----------CGCAG----AGAGAAAGTGAATA------AAAAACC-------------------------A--TTTG------GGGGTTCAAAGTTCTG-----T------CTAGTGACGCCAGCAG--CTGTTGATCGTCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AA----------------TAAAC----------CC----------------------A-CAACCCAATGGCGTTCCTCAACAAGGTGAGCA---TAACATATTAGTTAGTTAA----------AACGAC---GGAGAAAGTGAAAA------ACATATCACAGT-GACATACA-----GAAA--ATG-------CGGAAGGTTCAAAGTCCTC-----TCA--GTTCTGTGACGACAGCAA--CTGTCGATCGTCTGAAA-------------A-T-------------------------TAGGTTT-----------ATA-CATACATACTTATA--ATCGAGTGGGTTCAGTTTCGTAAACACAT------TTGTTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AA--------------AATAAAC----------CC----------------------A-TAACCCAATGGCGTTCCTTAACAAGGTGAGCA---TATC-----GTTTAATTTA----------TACCGC---AGAGAAAGTGAAAC------ACACAACGC---AAAGATAATTTATAACAT--A--TGAAAAATGGATGGTTCAAAGTTCTC-----TAA--GACTAGTGACGACAACAA--CTGTTGATCGTCCGCGA-------------T-T-------------------------AAGGTTTGCACATATATA-TA-TATATATATGTATG--TACGAGTGGGTTCCGTTTCGTAAACACAT------TTGTTGT-TGCCTGTCTGCCAGCAATCATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AA--------------AATAAAC----------CC----------------------A-TAACCCAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----GGTTAATTTA----------TTCCGC---GCATAAAGTGAAAA------ACAAAACCTAACGCACAGATA-----AAATAAA--TGAAAAGAGGAGGGTTCAAAGTTCTC-----TCA--GATTAGTGACGACAGCAA--CTGTTGATCGTCTGCGA-------------A-T-------------------------TAGGTTT-----------ATAT-GT----ACATATA--TACAAGTGGGTTCCGTTTCGTAAACATAT------TTGTTGT-TGCCTATCTGCCAGCAATCATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AA--------------AATAAAC----------CC------------------------CAAGCCAATGGCGTTCCTCAACAAGGTGAGCA---TA--------GTTAGTTTA----------AGCCGC---GGTGAAAGTGAAAA------ACACATCAGAAC-CACATATA-----CTGT--G--TACG------AAGGTTCGAAGTTCTC-----GCA--GATTGGTGACGACAGCAA--CTGTTGATCGTCTGGGA-------------T-T-------------------------TGGCTTCAA-----------A-CAAACATACATATA--ATCGAGTGGGTTCCGTTTCGTAAACACAT------TTGTTGT-TGCCCATCTGC-GGCAATCATC-TGTACTTTGCCCCCC-TCGGAAAATTATTATTAGCGGCGTCTAATGGC---------------------------GGC--------TTGTTTTTGCACTCGA----------------------------------------TTCACT-------TTATTGGCAGGC-----------------------------------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
AA--------------AATAAAC----------CC----------------------A-TAGCCCAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTTAGTTTA----------TACCGC---GGAGAAAGTGAAAA------ACACAGCCC---AGAGATATA-------TT--ATTTGC-------GAGGTTCAAAGTTCTC-----TTA--GATTAGTGACGACAGCAA--CTGTTGATCGTCTGCGA-------------T-T-------------------------TAGGTTT-----------ATA---------CATATA--TTCGAGTGGGTTCCGTTTCGTAAACACAT------TTGTTGT-TGCCTATCTGCCAGCAATCATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AA--------------------C----------CC-------A-------------CA--AACCCAATGGCGTTCCTCAACAAGGTAGGCA---TATC-----ATTTAATTTA----------TAAAGC---GGTGAAAGTGAAAA------ATAAATAAG--------TCTA-----TAAA--A--TGCG------AGGGTTCAAAGTTCTC-----TCACAGATTAGTGACGACAGCAA--CTGTTGATCGTCTGCGA-------------A-T-------------------------TAGGTTTACGTATATATG-TA-CATACATATCTATA--TACGAGTGGGTTCCGTTTCGTAAACACAT------TTGTTGT-TGCTTATCTGCCAGCAATCATC-TGTACTTTGCCCCCC-T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AA--------------AATAAAC----------CC----------------------A-CATTCAAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTCAATTTA----------CAACGC---AGAGAAAGTGAAAA------ACACATCGC---TGGGACATA-----TCAT--A--TCCA------AAGGTCCAAAGTTCTA-----TCA--CGCTAGTGACGACAGCAA--CTGTTGATCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................AAATGGCGTTCCTCAACAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CAACAAGGTGAGCA---TATC-----AGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000011000000000000000000000000000000000
...................................................................TGGCGTTCCTCAACAAGGTGAGCA---TA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AT--A--TCCA------AAGGTCCAAAGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAAC----------CC----------------------A-CATTCAAATGGCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................C----------CC----------------------A-CATTCAAATGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AATGGCGTTCCTCAACAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010
...................................................................TGGCGTTCCTCAACAAGGTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TGGCGTTCCTCAACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000
............................................................................TCAACAAGGTGAGCA---TATC-----AG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000
....................AAC----------CC----------------------A-CATTCAAATGGCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.........................................................A-CATTCAAATGGCGTTCCTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTCAAATGGCGTTCCTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................A------ACACATCGC---TGGGACATA-----TC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GCGTTCCTCAACAAGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AATGGCGTTCCTCAACAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CGC---AGAGAAAGTGAAAA------ACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................GGCGTTCCTCAACAAGGTGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TA----------CAACGC---AGAGAAAGTGATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AGAGAAAGTGAAAA------ACACATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TAAAC----------CC----------------------A-CATTCAAATGGCGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CATTCAAATGGCGTTCCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AC----------CC----------------------A-CATTCAAATGGCGTTCCTCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ACGC---AGAGAAAGTGAAAA------AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................TAAAC----------CC----------------------A-CATTCAAATGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GTTCCTCAACAAGGTGAGCA---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................AAATGGCGTTCCTCAACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TCAACAAGGTGAGCA---TATC-----A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................TGACGACAGCAA--CTGTTGATC................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................ATTCAAATGGCGTTCCTCAACAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TGGCGTTCCTCAACAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CATTCAAATGGCGTTCCTCAACAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................ATTCAAATGGCGTTCCTCAACAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................CATTCAAATGGCGTTCCTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................ATGGCGTTCCTCAACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AT--A--TCCA------AAGGTCCAAAGTTCT........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................AACAAGGTGAGCA---TATC-----AG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................TA-----TCA--CGCTAGTGACGACAGCA............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................AAATGGCGTTCCTCAACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TAAAC----------CC----------------------A-CATTCAAATGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................ACAAGGTGAGCA---TATC-----AG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................TGGGACATA-----TCAT--A--TCCA------AAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AAAGTTCTA-----TCA--CGCTAGT......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................................................................TGGCGTTCCTCAACAAGGTGAGCA---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TGACGACAGCAA--CTGTTGA..................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AATTTA----------CAACGC---AGAGAAAGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................AAATGGCGTTCCTCAACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................C----------CC----------------------A-CATTCAAATGGCGTTCCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TTTA----------CAACGC---AGAGAAAGTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GCGTTCCTCAACAAGGTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................AC----------CC----------------------A-CATTCAAATGGCGTTCCTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CC----------------------A-CATTCAAATGGCGTTCCTCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CC----------------------A-CATTCAAATGGCGTTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................CC----------------------A-CATTCAAATGGCGTTCCTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................C----------------------A-CATTCAAATGGCGTTCCTCAACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AAATGGCGTTCCTCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATGGCGTTCCTCAACAAGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................A-----TCAT--A--TCCA------AAGGTCCAAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................AGAAAGTGAAAA------ACACATCGC---T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATGGCGTTCCTCAACAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTCAAATGGCGTTCCTCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................A------AAGGTCCAAAGTTCTA-----TCA--C............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AAATGGCGTTCCTCAACAAGACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
droSim2
AA--------------AATAAAC----------CC----------------------A-CATTCAAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTTAGTTTA----------CAAAGC---AGAGAAAGTGAAAA------ACACATAGC---TGGCAGATA-----TCAT--A--TCCA------AAGATCCAAAGTTCTA-----TCG--CACTAGTGACGACAGCAA--CTGTTGATCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................CACATAGC---TGGCAGATA-----TC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000000000
......................C----------CC----------------------A-CATTCAAATGGCGTTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00210010000000000000
..............................................................................................................................................AAAA------ACACATAGC---TGGCAGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
......................C----------CC----------------------A-CATTCAAATGGCGTTCCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
............................................................ATTCAAATGGCGTTCCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
................................................................................................................................................................................................................................ACTAGTGACGACAGCAA--CTGT.....................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...........................................................................................................................................................CATAGC---TGGCAGATA-----TCAT--A--TC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
............................................................ATTCAAATGGCGTTCCTCAACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000000000
....................AAC----------CC----------------------A-CATTCAAATGGCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.............................................................TTCAAATGGCGTTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15170.06100000000001000000
droSec2
GA--------------------C----------CC-------A-------------CATTCATCAAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----AGTTAGTTTA----------CAATGC---AGAGAAATTGAAAA------ACACATAGC---TGGCAGATA-----TCAT--A--CCCA------AAGATCCAAAGTTCTA-----T------CTAGTGACGACAGCAA--CTGTTGATCGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................AAATGGCGTTCCTCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0021010
.............................................................ATCAAATGGCGTTCCTCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........................................................TTCATCAAATGGCGTTCCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................................................................................................................................T------CTAGTGACGACAGCAA--CTGT.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.................................................................................................................................................................................................................TCTA-----T------CTAGTGACGACAGCA............................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
.................................................................AATGGCGTTCCTCAACAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..................................C-------A-------------CATTCATCAAATGGCGTTCCTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
..................................C-------A-------------CATTCATCAAATGGCGTTCCTCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
...........................................................................................................................................TTGAAAA------ACACATAGC---TGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...............................................................CAAATGGCGTTCCTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
GA--------------------C----------CC-------A-------------CATTCATCAAATGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
droYak3
AA--------------AATAAAC----------CC----------------------A-TATTCAGATGGCGTTCCTCAACAAGGTGAGCA---TATT-----AGTTGATTTA----------CAACGC---AGCGAAAGTGAAATTAACATATACATAGC---TCAGACATA-----TCCT--A--TCCG------AAAGTTTAAAGTTCTA-----TCA--CTCTAGTGACGACAGCAA--CTGTTGATCGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................A-TATTCAGATGGCGTTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.00502000120000
..................................C----------------------A-TATTCAGATGGCGTTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00401000030000
............................................................ATTCAGATGGCGTTCCTCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00201000010000
..................................C----------------------A-TATTCAGATGGCGTTCCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................................................CAGATGGCGTTCCTCAACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................AAC----------CC----------------------A-TATTCAGATGGCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................A-TATTCAGATGGCGTTCCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................ATAAAC----------CC----------------------A-TATTCAGATGGCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
......................C----------CC----------------------A-TATTCAGATGGCGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...........................................................................................................GATTTA----------CAACGC---AGCGAAAGTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..........................................................................CCTCAACAAGGTGAGCA---TATT-----AGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...............................................................................................................................................................................................................GTTCTA-----TCA--CTCTAGTGACGACA...............................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................................C----------------------A-TATTCAGATGGCGTTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
................................................................................CAAGGTGAGCA---TATT-----AGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................................................................................................................................................................AGTTTAAAGTTCTA-----TCA--CTCTAGT......................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.........................................................A-TATTCAGATGGCGTTCCTCAACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
................AATAAAC----------CC----------------------A-TATTCAGATGGCGTTCCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...........................................................TATTCAGATGGCGTTCCTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEre2
C---------------------------------------------------------------AAATGGCGTTCCTCAACAAGGTGAGCA---TATC-----GGTTAGTTTA----------CAACAAAAGAGAGAAAGTGAAAA------ACACACAGC---TGG-GTATA-----TCCT--A--TCCG------AAAGTATAAAGTTCTA-----TCA--CGCTAGTGACGACAGCAA--CTGTTGATCGTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................CTCAACAAGGTGAGCA---TATC-----GGTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
...................................................................TGGCGTTCCTCAACAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
..............................................................................................................TTA----------CAACAAAAGAGAGAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...........................................................................................................AGTTTA----------CAACAAAAGAGAGAAAGTGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
..................................................................ATGGCGTTCCTCAACAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000

Generated: 05/18/2015 at 03:43 AM