ID:

dwi_2241

 Coordinate:

scf2_1100000004830:284636-284786 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.6 -10.6 -10.0

Flybase annnotation

exon [dwil_GLEANR_12481:2]; CDS [Dwil\GK12327-cds]; intron [Dwil\GK12327-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAACCATTAACCATCCAATCATCGTTTCAGATAAGTGACCAACACAAAAAAAAAAAAAAAAACCGAATTGAAGTGGAAGTGGAAGCGTCGACAACTTTAGTTGTGCCACGGACATTGACACGATCAGTCGAAAAACAAGAAAATAAATAAAAGAGAGACAGAAAAAAGTGTCGAAATGTTACTGTCCACCTCCTCTTTTAGTAATCTAATCGTTCTACTGAGCGTGTTGGGTCTTTTTTGCGGCTGGACGG
**********************************************************************************************************....(((((((((((..((.(((...........................))).)).....)))))))..))))...******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 V117
male body		 M020
head
 M045
female body
......................................................................................................................................................................................................................CTACTGAGCGTGTTGGGTCT................. 20 0 1 6.00 6 5 1 0 0
......................................................................................................................................................................................................................CTACTGAGCGTGTTGGGT................... 18 0 1 4.00 4 3 1 0 0
....................................................................................................................................................................AAAGTGTCGAAATGTTACT.................................................................... 19 0 1 3.00 3 0 0 3 0
..........................................................................................................CACGGACATTGACACGATCAGT........................................................................................................................... 22 0 1 3.00 3 3 0 0 0
...................................................................................................................................................................................................................GTTCTACTGAGCGTGTTGGGT................... 21 0 1 3.00 3 1 2 0 0
...........................................................................................................................................................................CGAAATGTTACTGTCCACCTCCTCTT...................................................... 26 0 1 2.00 2 0 0 0 2
..................................................................................................................................................ATAAAAGAGAGACAGAAAAAA.................................................................................... 21 0 1 2.00 2 2 0 0 0
.................................................................................................................................................................................................................................GTTGGGTCTTTTTTGCGGC....... 19 0 1 2.00 2 2 0 0 0
...............................................................................................................................................................................................................AATCGTTCTACTGAGCGTGTTGGGT................... 25 0 1 2.00 2 1 1 0 0
.....................................................................................................................................................AAAGAGAGACAGAAAAAAGTGT................................................................................ 22 0 1 2.00 2 1 1 0 0
......................................................................................................................................................................................................................CTACTGAGCGTGTTGGGTCTTT............... 22 0 1 2.00 2 0 2 0 0
................................................................................................................................................................................................................ATCGTTCTACTGAGCGTGTTGGGT................... 24 0 1 2.00 2 0 2 0 0
...........................................................................................................................................AAAATAAATAAAAGAGAGACAGA......................................................................................... 23 0 1 2.00 2 1 1 0 0
.............................................................................................................................................................................................................CTAATCGTTCTACTGAGCGTGTTGGGT................... 27 0 1 2.00 2 2 0 0 0
.........................................................................................................................GATCAGTCGAAAAACAAGAA.............................................................................................................. 20 0 1 2.00 2 2 0 0 0
.....................................................................................................................................................AAAGAGAGACAGAAAAAAGT.................................................................................. 20 0 1 2.00 2 2 0 0 0
.........................................................................................................................................................................GTCGAAATGTTACTGTCCA............................................................... 19 0 1 2.00 2 2 0 0 0
................................................................GAATTGAAGTGGAAGTGGAAGCGTCGAC............................................................................................................................................................... 28 0 1 2.00 2 0 2 0 0
................................................................................................................................................................................................................ATCGTTCTACTGAGCGTGTTGGGTC.................. 25 0 1 1.00 1 0 1 0 0
..........................................................................................................................................GAAAATAAATAAAAGAGAGACA........................................................................................... 22 0 1 1.00 1 1 0 0 0
..............................................................................................................................................ATAAATAAAAGAGAGACAGAAAAAAGT.................................................................................. 27 0 1 1.00 1 1 0 0 0
.....................................................................................................................................AACAAGAAAATAAATAAAAGAGA............................................................................................... 23 0 1 1.00 1 1 0 0 0
.......................................................................................................TGCCACGGACATTGACACGATCA............................................................................................................................. 23 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................AAAAAGTGTCGAAATGTTACTGTCCA............................................................... 26 0 1 1.00 1 1 0 0 0
..................................................................................................................................................ATAAAAGAGAGACAGAAAA...................................................................................... 19 0 1 1.00 1 1 0 0 0
...............................................................................................................ACATTGACACGATCAGTCG......................................................................................................................... 19 0 1 1.00 1 1 0 0 0
...............................................................CGAATTGAAGTGGAAGTGGAAGC..................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0
................................................................................................................................................AAATAAAAGAGAGACAGAAAAAAG................................................................................... 24 0 1 1.00 1 0 0 1 0
...............................................................................................................................................TAAATAAAAGAGAGACCGAAAAAAGT.................................................................................. 26 1 1 1.00 1 1 0 0 0
....................................................................................................................................................AAAAGAGAGACAGAAAAAAGTGT................................................................................ 23 0 1 1.00 1 0 1 0 0
.................................................................................................................................................AATAAAAGAGAGACAGAAA....................................................................................... 19 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................ACAGAAAAAAGTGTCGAAATGTTACT.................................................................... 26 0 1 1.00 1 0 1 0 0
................................................................................................................................................AAATAAAAGAGAGACAGAAAAAA.................................................................................... 23 0 1 1.00 1 0 1 0 0
......................................................................................................GTGCCACGGACATTGACACGATCAGT........................................................................................................................... 26 0 1 1.00 1 0 0 0 1
..................................................................ATTGAAGTGGAAGTGGAA....................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................ACAGAAAAAAGTGTCGAAATGTT....................................................................... 23 0 1 1.00 1 0 1 0 0
...................................................................................................................................AAAACAAGAAAATAAATAAAAGAGA............................................................................................... 25 0 1 1.00 1 1 0 0 0
........................................................AAAAAACCGAATTGAAGTGGAAGT........................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
....................................................................................................................................................AAAAGAGAGACAGAAAAAAGT.................................................................................. 21 0 1 1.00 1 0 1 0 0
........................................................................................................GCCACGGACATTGACACGATCA............................................................................................................................. 22 0 1 1.00 1 1 0 0 0
.......................................................................................................TGCCACGGACATTGACACGATCAGT........................................................................................................................... 25 0 1 1.00 1 0 0 1 0
..................................................................................................................................................................AAAAAGTGTCGAAATGTTACT.................................................................... 21 0 1 1.00 1 0 0 0 1
..........................................................................................................CACGGACATTGACACGATCAG............................................................................................................................ 21 0 1 1.00 1 0 0 1 0
...............................................................................................................................................TAAATAAAAGAGAGACAGAAAAAAAG.................................................................................. 26 2 1 1.00 1 1 0 0 0
.........................................................................................................................................AGAAAATAAATAAAAGAGAGACAGAAAAA..................................................................................... 29 0 1 1.00 1 0 1 0 0
....................................................................TGAAGTGGAAGTGGAAGCGTCGAC............................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
...........................................................................................................ACGGACATTGACACGATCAGTCGAAAAA.................................................................................................................... 28 0 1 1.00 1 0 0 1 0
......................................................................................................GTGCCACGGACATTGACACGATCA............................................................................................................................. 24 0 1 1.00 1 0 0 1 0
..........................................................................................................CACGGACATTGACACGATC.............................................................................................................................. 19 0 1 1.00 1 0 0 1 0
.....................................................................................................................ACACGATCAGTGGAAAAAAA.................................................................................................................. 20 2 1 1.00 1 1 0 0 0
..................................................................................................................................................ATAAAAGAGAGACAGAAAAAAGTGTC............................................................................... 26 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................................GTTCTACTGAGCGTGTTGGCT................... 21 1 1 1.00 1 1 0 0 0
.....................................................................................................................................................................AAGTGTCGAAATGTTACT.................................................................... 18 0 1 1.00 1 1 0 0 0
.......................................................................................................TGCCACGGACATTGACACGATC.............................................................................................................................. 22 0 1 1.00 1 1 0 0 0
......................................................................................................................................................AAGAGAGACAGAAAAAAGT.................................................................................. 19 0 1 1.00 1 0 1 0 0
.................................................................................................................................................................AAAAAAGTGTCGAAATGTTACT.................................................................... 22 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................................GTTCTACTGAGCGTGTTGGGTCT................. 23 0 1 1.00 1 1 0 0 0
..................................................................................................................................................ATAAAAGAGAGACAGAAAAAAGTGTCG.............................................................................. 27 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................TGGGTCTTTTTTGCGGCTG..... 19 0 1 1.00 1 0 1 0 0
.........................................................................................................................GATAAGTCGAAAAACAAGAAAATA.......................................................................................................... 24 1 1 1.00 1 1 0 0 0
.........................................................................................................CCACGGACATTGACACGATCAGTCGA........................................................................................................................ 26 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................................CTACTGAGCGTGTTGGGTCTTTT.............. 23 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................AGAGACAGAAAAAAGTGT................................................................................ 18 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................................GTTGGGTCTTTTTTGCGGCTGGA... 23 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................................GTTCTACTGAGCGTGTTGGGTC.................. 22 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................................................GTTCTACTGAGCGTGTTGGGTCTTT............... 25 0 1 1.00 1 0 0 0 1
..............................................................................................................................................................................AATGTTACTGTCCACCTCCTCTT...................................................... 23 0 1 1.00 1 0 1 0 0
.............................................................................................................................................AATAAGTAAAAGAGAGACAGAAA....................................................................................... 23 1 1 1.00 1 1 0 0 0
............................................................................................................................................................................GAAATGTTACTGTCCACCTCC.......................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................ACACGATCAGTCGAAAAAAA.................................................................................................................. 20 1 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................................GTTGAGTCTTTTTTGCGGCT...... 20 1 1 1.00 1 1 0 0 0
........................................................................................................................................................GAGAGACAGAAAAAAGTGTC............................................................................... 20 0 1 1.00 1 0 1 0 0
...............................................................................................................................................................AGAAAAAAGTGTCGAAATGTTACT.................................................................... 24 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................TCGTTCTACTGAGCGTGTTGGGT................... 23 0 1 1.00 1 1 0 0 0
............................................................................................................................................AAATAAATAAAAGAGAGACAGA......................................................................................... 22 0 1 1.00 1 1 0 0 0
.........................................................................................................................................AGAAAATAAATAAAAGAGAGA............................................................................................. 21 0 1 1.00 1 1 0 0 0
.........................................................................................................................GATCAGTCGAAAAAAAAGAAA............................................................................................................. 21 1 1 1.00 1 0 1 0 0
....................................................................................................................................................................................................TTTAGTAATCTAATCGTTCTACTGAGCG........................... 28 0 1 1.00 1 0 0 0 1
................................................................................................................................................AAATAAAAGAGAGACAGAAAAAAGT.................................................................................. 25 0 1 1.00 1 1 0 0 0
.............................................................................................ACTTTAGTTGTGCCACGGAC.......................................................................................................................................... 20 0 1 1.00 1 0 0 1 0
.................................................................................................................................................AATAAAAGAGAGACAGAAAAAA.................................................................................... 22 0 1 1.00 1 1 0 0 0
................................................................................................................CATTGACACGATCAGTCGA........................................................................................................................ 19 0 1 1.00 1 1 0 0 0
....................................................................................................................................................AAAAGAGAGACAGAAAAA..................................................................................... 18 0 2 1.00 2 2 0 0 0
...................................................................................................................................................TAAAAGAGAGACAGAAAAAAGT.................................................................................. 22 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................AGAAAAAAGTGTCGAAATGTTACTGT.................................................................. 26 0 1 1.00 1 0 1 0 0
...........................................................................................................................................................................CGAAATGTTACTGTCCAC.............................................................. 18 0 1 1.00 1 1 0 0 0
............................................................AACCGAATTGAAGTGGAAGT........................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
................................................................GAATTGAAGTGGAAGTGGAAGCG.................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................AAAGAGAGACAGAAAAAAGTGTC............................................................................... 23 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................................CTACTGAGCGTGTTGGGTCTT................ 21 0 1 1.00 1 1 0 0 0
....................................................................................................................................................AAAAGAGAGACAGAAAAAA.................................................................................... 19 0 2 0.50 1 1 0 0 0
..............................................................................................................................................ATAAATAAAAGAGAGACA........................................................................................... 18 0 2 0.50 1 1 0 0 0
.....................................................................................................................................AACAAGAAAATAAATAAAA................................................................................................... 19 0 2 0.50 1 1 0 0 0
..............................................................................................................................................ATAAATAAAAGAGAGACAG.......................................................................................... 19 0 2 0.50 1 1 0 0 0
.........................................................................................................................................................................GTCGAAATGTTACTGTCAAA.............................................................. 20 2 2 0.50 1 0 0 0 1
.................................................................................................................................................AATAAAAGAAAGACAGAAAAAA.................................................................................... 22 1 4 0.25 1 1 0 0 0
....................................................................................................................................AAACAAGAAAAAAAATAAAAGA................................................................................................. 22 1 7 0.14 1 1 0 0 0
...................................................................................................................................................TAAAAGAGAGATAGAAAA...................................................................................... 18 1 18 0.06 1 1 0 0 0
...............................................AAAAAAAAAAAAAAACCGAA........................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................................................................TTTATACTGAGCGTATTGG..................... 19 3 20 0.05 1 0 0 0 1
.................ATCATCGGTTCAGATCCG........................................................................................................................................................................................................................ 18 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

GTTGGTAATTGGTAGGTTAGTAGCAAAGTCTATTCACTGGTTGTGTTTTTTTTTTTTTTTTTGGCTTAACTTCACCTTCACCTTCGCAGCTGTTGAAATCAACACGGTGCCTGTAACTGTGCTAGTCAGCTTTTTGTTCTTTTATTTATTTTCTCTCTGTCTTTTTTCACAGCTTTACAATGACAGGTGGAGGAGAAAATCATTAGATTAGCAAGATGACTCGCACAACCCAGAAAAAACGCCGACCTGCC
********************************************************************....(((((((((((..((.(((...........................))).)).....)))))))..))))...********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body
..............................................................................CAGCTTGGCAGCTGTAGAA.......................................................................................................................................................... 19 3 16 0.06 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004830:284586-284836 + dwi_2241 C-AACC------ATT----AACCATCCAATCATCGTTTCAGATAAGTGACCAACACAA-----------AAAAAAAAAAAAAAACCG-------AATTGAAGTGG---------AAGTGGAAGCGTCG-ACAACTTTA---GTTGTGCCACGGACATTGACACGATCAGTCGAAAAACAAGAAAATAAATAAA---------AGAGAGAC----------A-GAAAAAAGTGTCGAAATGTTACTGTCCACCTCCTCTTTTAGTAATCTAATCGTTCTACTGA------GCGTG---T--TGGGTCT-TTTT---------TGCGGCTGGACGG
droVir3 scaffold_13049:6694187-6694233 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTAATCGCGCTGTT------------G------TG------CCTCTGCCTATCTCTGGGCCCGTCTG
droMoj3 scaffold_6680:5021143-5021348 + C---------------------------------TTTGCAGATAACGAGCACA-----CGGCACTCGA-AT---TAGC-------CAAAAATAAAATAAACAAAATTGAACAGCGACT---GGTG-CG-AGAGCCTCA---GTTGTTTTACGAGCTTCGGCGCGCGCGCACACACA-------------CATCAGATTCTCTGGA-------AA------------AATCTGTGACAATGCT---------------GCGAGCTAATCTAATCGGACTGCT------------GTGCCTCTGCCTGT------------CTCTGGGCCCGGCTG
droGri2 scaffold_15110:6090485-6090669 - T-T-----------C----AAT------------CTTTCAGATAAGAGCACA------CGGTACTTGAGA-----CCG-------GTCAACAAAAATCGACAGTACTGA------------GCAAC---TGGGTCTCA---GTTGCTCTGCGCACAGTGAAACGAACACAAATCAG--------------------------GGA-------AA----------------------AATGCT---GCC---------ACGTTGTAATCTAATCGCGGTACTCT------GCATG------TGCCTCTGCCTGTTCCTT------GGACTGGCTG
dp5 XR_group6:3775589-3775782 + G---CC------AC---CCAAT-----------CATTTCAGATAGCGTGGGG----------------------GCAT-------CGAAACTGAAATCGGAGCTTCTTA------------AGTGCCACCAGACATCA---GTCGAAGTACGGACGTAGTCGGGATTAGACGAAC--------------------------------TAT-----------------------GAGAATGCT---T---GGCCGAAGATATTATAATCTTATCGCTGTTCTGGCTGTGGGCCTCTTCATGTGCGTCT------------GCCCAGATCCGGTTG
droPer2 scaffold_9:2068545-2068738 + G---CC------AC---CCAAT-----------CATTTCAGATAGCGTGGGG----------------------GCAT-------CGAAACTGAAATCGGAGCTTCTTA------------AGTGCCACCAGACATCA---GTCGAAGTACGGACCTAGTCGGGATTAGACGAAC--------------------------------TAT-----------------------GAGAATGCT------TGTCCGAAGATATTATAATCTTATCGCTGTTCTGGCTGTGGGCCTCTTCATGTGCGTCT------------GCCCAGATCCGGTTG
droAna3 scaffold_13337:14443438-14443643 - CTAACC------ACC--TCAAT-----------TGTTTCAGATAGAG-------------------------------------------CCGAAATCGGAGCTCTTCA------------ATTGCCG-TGGACGTCA---GTCGCAGAGCGAAACTAGTCGTGATCGGACGGAA--------------------------------TACGGAA-CTTAAC-TC-------TTCAGCATGCT---GCCCACCGCTATACGCCGTAATCTAATCGCCGGGCTCGCTTTTGGCCTG------TGCGTCTGCCTCTGTTTCGGACCCAGTCCGGCGG
droBip1 scf7180000396641:842988-843193 + CTAACC------ACC--TCAAT-----------CGTTCCAGATAGAG-------------------------------------------CCGAAATCGGAGCTCCTCA------------ATTGCCG-TGGACGTCA---GTCGCAGAGCGAAACTAGTCGTGATCGGACGGAA--------------------------------TACGGAA-CTTAAC-TC-------TTCAGCATGCT---GCCCACCGCCATACGCCGTAATCTAATCGCCGGGCTCGCTTTGGGCCTG------TGCGTCTGCCTCTGCTTCGGACCGAGTCCGGCGG
droKik1 scf7180000302351:137577-137803 + C-AACGAATCCCAC---ACAAT-----------CGTTTCAGATAATATTCGAAT---------------A----GCGA-------CAAAGCCCAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGTCGTGCGAACCTTGTTGCGATCGGACCTG-T--------------------CACCT-CGGA------GAACTAACC-A---TCGTCGTCGTCATGCT---GC---------TGCTCCCTAATCTTATCGCCGGCCTCACTGTGGGCCTG------TGCGTCTGCCTCTGCCTTGGACCGAGTCTGGTAG
droFic1 scf7180000454107:1336973-1337196 - G-AACC------ACCGACCAAT-----------CGTTTCAGATAGGCCGCCT-----------------------CGT-------CGAAACTAAAATCGGAGCTCCTCA------------ATCGCGG-TGGACGTCA---GTCGCAGAGCGGACCTTTAAGCGATCGGAGCCAAA--------------------------CGGAATAC----------T-GCAAACCGCTTCGCCATGCT---GCCCATCATCATCCGCCGTAATCTTATCGCCGTGTTCGCTTTCGGCCTG------TGCGTCTGTCTCGGTTTTGGCCCTTGTCCGGCGG
droEle1 scf7180000490993:672259-672463 - G-AACC------CCA-TCAAAT-----------CGTTTCAGATAGGGCGCGA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGCAGAGCGGACCTTCAAGCGATCGGACCCTAA--------------------------CGG-------AA-TCTACC-GC--T------CATCATGCT---GCCCGTCGTCATCCGCCGTAATCTAATCGCCGTGCTCGCAGTGGGCCTG------TGCGTCTGTCTTT------------GTCCGGTGG
droRho1 scf7180000779490:55904-56105 - G-AACC------ACA----AAT-----------AGTTTCAGATAGGGCGCGA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCT-CAGACGTCA---GTCGCAGAGCGGACCTTCAAGCGATCGGACCCAAA--------------------------CGG-------AA-TCAACC-GC--T------CATCATGCC---GCCCGTCGTCATCCGCCGTAATCTAATCGCCGTGCTGGCGTTTTGCCTG------TGCGTCTGTCTT------------GGTCCGGTGG
droBia1 scf7180000302193:1053628-1053834 - G-AACC------ACC----AAT-----------CGTTTCAGATAGGCCGCCA----------------------CCAT-------CGACACCGAAATCGGAGCTCCTCA------------ATCGCCG-CA-ACGTCA---GTCGCAGAGTGGACCTAGTGGGGATCGGACC-TAT--------------------------CGG-------AA-TCAACC-GC--TCGTCGCCATCATGCT---GCCC---GTCATCCGCCGTAATCTTATCGCCT---------TGGGCCTG------TGCGTCTGTCTTTGCTTTGGACCGGGTCCGGTGG
droTak1 scf7180000415409:545496-545718 - G-AACC------ACC----AAT-----------CGTTTCAGATAGGGCGCCAACCCGG-----------A----CCAT-------CGAAACTAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGCAGAGTGGACCTAGTGGCGATCGGTTC-TAA--------------------------CGGA------AA-TCTACTAGC--T---CATCATCATGTT---GCCC---GTCATCCGTCGTAATCTTATCGCCCTGCTGGCTTTGGGCCTG------TGCGTCTGTCTTTGTTTCGGACCCGGTCCGGTGG
droEug1 scf7180000409471:1811776-1811989 + G-AACC------ACC----AAT-----------TGTTTCAGATAGGGCGCGA-----------------------CAT-------CGAAACTAAAATCGGAGCTCCTCA------------ATTGCTG-CAGACGTCGGACGTCGGAGAGTGCAACTAATCGTGATCGGACTCTAC--------------------------CGA-------AA-TCTAAC-GC--T------CACCATGCT---GCCC---ATCATCCGTCGTAATCTTATCGCCGTGCTCGCTATTGGCTTA------TGCGTCTCTCTAAGTTGTGGACCGAGTCTGGTGG
dm3 chr3L:17747334-17747544 - G-AACC------GCC----AAT-----------TGTTTCAGATAGGGCGCTA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGCAGAGTGGACCTAGTCGCGATCGGACCCTAA--------------------------CGA-------AA-TCTACC-GC--T------CATCATGTC---GCCA---GTCATCCGCCGTAATCTTATCGCCTGTCTCACTTTGGGCCTG------TGCGTCTGTCTTAGCTTCGGACCGGGTCCGGTGG
droSim2 3l:17331130-17331340 - G-AACC------GCC----AAT-----------CGTTTCAGATAGGGCGGTA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTTGCTGAGTGGACCTAGTCGCGATCGGACCCTAA--------------------------CGG-------AA-TCTACC-GC--T------CATCATGTC---GCCA---GTCATCCGCCGTAATCTTATCGCCTGGCTAACTTTGGGCCTG------TGCGTCTGTCTTAGCTTCGGACCGGGTCCGGTGG
droSec2 scaffold_0:9794499-9794709 - G-AACC------GCC----AAT-----------CGTTTCAGATAGGGCGCTA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTTGCTGAGTGGACCTAGTCGCGATCGGACCCAAA--------------------------CGG-------AA-TCTACC-GC--T------CATCATGTC---GCCA---GTCATCCGCCGTAATCTTATCGCCTGGCTAACTTTGGGCCTG------TGCGTCTGTCTTAGCTTCGGACCGGGTCCGGTGG
droYak3 3L:16310810-16311027 + A-AACC------GCC----AATTGTT----TCCAATTTCAGATAGGGCTCCA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGCAGAGTGGACCTAGTCGCGATCGGACCCTAA--------------------------CTG-------AA-TCTACC-GC--T------CATCATGTC---GCCA---GTCATCCGCCGTAATCTTATCGCCTGGCTCGCATTGGGCCTG------TGCGTCTGTCTTAGCTGGCTACCGGGTCCGGTGG
droEre2 scaffold_4784:16113007-16113202 + A-AACC------GCC----AAT-----------CGTTCCAGGTA---------------------------------------------ACCAAAATCGGAGCTCCTCA------------ATCGCCG-CGGACGTCA---GTCGCCAAGTGGACCTAGTCGCGATCGGACCCTAA--------------------------CGG-------AA-ATTACC-GC--T------CATCATGTG---GCCA---GTCATCCGCCCTAATCTTATCACCTGGTTCGCTTTGGGCCTG------TGTGTCTGTCTTAGCTTGGTGCCGGGTCCGGTGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
C-AACC------ATT----AACCATCCAATCATCGTTTCAGATAAGTGACCAACACAA-----------AAAAAAAAAAAAAAACCG-------AATTGAAGTGG---------AAGTGGAAGCGTCG-ACAACTTTA---GTTGTGCCACGGACATTGACACGATCAGTCGAAAAACAAGAAAATAAATAAA---------AGAGAGAC----------A-GAAAAAAGTGTCGAAATGTTACTGTCCACCTCCTCTTTTAGTAATCTAATCGTTCTACTGA------GCGTG---T--TGGGTCT-TTTT---------TGCGGCTGGACGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................CTACTGA------GCGTG---T--TGGGTCT-..........................2016.00600150
....................................................................................................................................................................................................................................................................................CTACTGA------GCGTG---T--TGGGT.............................1814.00400130
..................................................................................................................................................................................................................................AAAGTGTCGAAATGTTACT.........................................................................................1913.00330000
....................................................................................................................................................CACGGACATTGACACGATCAGT....................................................................................................................................................................2213.00300030
.................................................................................................................................................................................................................................................................................GTTCTACTGA------GCGTG---T--TGGGT.............................2113.00300210
.........................................................................................................................................................................................................................................CGAAATGTTACTGTCCACCTCCTCTT...........................................................................2612.00202000
............................................................................................................................................................................................ATAAA---------AGAGAGAC----------A-GAAAAAA.........................................................................................................2112.00200020
.....................................................................................................................................................................................................................................................................................................G---T--TGGGTCT-TTTT---------TGCGGC.......1912.00200020
.............................................................................................................................................................................................................................................................................AATCGTTCTACTGA------GCGTG---T--TGGGT.............................2512.00200110
...............................................................................................................................................................................................AA---------AGAGAGAC----------A-GAAAAAAGTGT.....................................................................................................2212.00200110
....................................................................................................................................................................................................................................................................................CTACTGA------GCGTG---T--TGGGTCT-TT........................2212.00200200
..............................................................................................................................................................................................................................................................................ATCGTTCTACTGA------GCGTG---T--TGGGT.............................2412.00200200
.....................................................................................................................................................................................AAAATAAATAAA---------AGAGAGAC----------A-GA..............................................................................................................2312.00200110
...........................................................................................................................................................................................................................................................................CTAATCGTTCTACTGA------GCGTG---T--TGGGT.............................2712.00200020
...................................................................................................................................................................GATCAGTCGAAAAACAAGAA.......................................................................................................................................................2012.00200020
...............................................................................................................................................................................................AA---------AGAGAGAC----------A-GAAAAAAGT.......................................................................................................2012.00200020
.......................................................................................................................................................................................................................................GTCGAAATGTTACTGTCCA....................................................................................1912.00200020
......................................................................................G-------AATTGAAGTGG---------AAGTGGAAGCGTCG-AC...........................................................................................................................................................................................................2812.00200200
..............................................................................................................................................................................................................................................................................ATCGTTCTACTGA------GCGTG---T--TGGGTC............................2511.00100100
....................................................................................................................................................................................GAAAATAAATAAA---------AGAGAGAC----------A-................................................................................................................2211.00100010
........................................................................................................................................................................................ATAAATAAA---------AGAGAGAC----------A-GAAAAAAGT.......................................................................................................2711.00100010
...............................................................................................................................................................................AACAAGAAAATAAATAAA---------AGAGA...............................................................................................................................2311.00100010
.................................................................................................................................................TGCCACGGACATTGACACGATCA......................................................................................................................................................................2311.00100010
................................................................................................................................................................................................................................AAAAAGTGTCGAAATGTTACTGTCCA....................................................................................2611.00100010
............................................................................................................................................................................................ATAAA---------AGAGAGAC----------A-GAAAA...........................................................................................................1911.00100010
.........................................................................................................................................................ACATTGACACGATCAGTCG..................................................................................................................................................................1911.00100010
.....................................................................................CG-------AATTGAAGTGG---------AAGTGGAAGC..................................................................................................................................................................................................................2311.00100100
..........................................................................................................................................................................................AAATAAA---------AGAGAGAC----------A-GAAAAAAG........................................................................................................2411.00110000
..............................................................................................................................................................................................AAA---------AGAGAGAC----------A-GAAAAAAGTGT.....................................................................................................2311.00100100
...........................................................................................................................................................................................AATAAA---------AGAGAGAC----------A-GAAA............................................................................................................1911.00100010
................................................................................................................................................................................................................AC----------A-GAAAAAAGTGTCGAAATGTTACT.........................................................................................2611.00100100
..........................................................................................................................................................................................AAATAAA---------AGAGAGAC----------A-GAAAAAA.........................................................................................................2311.00100100
................................................................................................................................................GTGCCACGGACATTGACACGATCAGT....................................................................................................................................................................2611.00101000
...............................................................................................ATTGAAGTGG---------AAGTGGAA....................................................................................................................................................................................................................1811.00100010
................................................................................................................................................................................................................AC----------A-GAAAAAAGTGTCGAAATGTT............................................................................................2311.00100100
.............................................................................................................................................................................AAAACAAGAAAATAAATAAA---------AGAGA...............................................................................................................................2511.00100010
..............................................................................AAAAAACCG-------AATTGAAGTGG---------AAGT........................................................................................................................................................................................................................2411.00100100
..............................................................................................................................................................................................AAA---------AGAGAGAC----------A-GAAAAAAGT.......................................................................................................2111.00100100
..................................................................................................................................................GCCACGGACATTGACACGATCA......................................................................................................................................................................2211.00100010
.................................................................................................................................................TGCCACGGACATTGACACGATCAGT....................................................................................................................................................................2511.00110000
................................................................................................................................................................................................................................AAAAAGTGTCGAAATGTTACT.........................................................................................2111.00101000
....................................................................................................................................................CACGGACATTGACACGATCAG.....................................................................................................................................................................2111.00110000
.........................................................................................................................................................................................TAAATAAA---------AGAGAGAC----------A-GAAAAAAAG.......................................................................................................2611.00100010
...................................................................................................................................................................................AGAAAATAAATAAA---------AGAGAGAC----------A-GAAAAA..........................................................................................................2911.00100100
.................................................................................................TGAAGTGG---------AAGTGGAAGCGTCG-AC...........................................................................................................................................................................................................2411.00100100
.....................................................................................................................................................ACGGACATTGACACGATCAGTCGAAAAA.............................................................................................................................................................2811.00110000
................................................................................................................................................GTGCCACGGACATTGACACGATCA......................................................................................................................................................................2411.00110000
....................................................................................................................................................CACGGACATTGACACGATC.......................................................................................................................................................................1911.00110000
............................................................................................................................................................................................ATAAA---------AGAGAGAC----------A-GAAAAAAGTGTC....................................................................................................2611.00100100
...................................................................................................................................................................................................................................AAGTGTCGAAATGTTACT.........................................................................................1811.00100010
.................................................................................................................................................TGCCACGGACATTGACACGATC.......................................................................................................................................................................2211.00100010
................................................................................................................................................................................................A---------AGAGAGAC----------A-GAAAAAAGT.......................................................................................................1911.00100100
...............................................................................................................................................................................................................................AAAAAAGTGTCGAAATGTTACT.........................................................................................2211.00100100
.................................................................................................................................................................................................................................................................................GTTCTACTGA------GCGTG---T--TGGGTCT-..........................2311.00100010
............................................................................................................................................................................................ATAAA---------AGAGAGAC----------A-GAAAAAAGTGTCG...................................................................................................2711.00100010
............................................................................................................................................................................................................................................................................................................TGGGTCT-TTTT---------TGCGGCTG.....1911.00100100
...................................................................................................................................................CCACGGACATTGACACGATCAGTCGA.................................................................................................................................................................2611.00100100
....................................................................................................................................................................................................................................................................................CTACTGA------GCGTG---T--TGGGTCT-TTT.......................2311.00100010
............................................................................................................................................................................................................AGAGAC----------A-GAAAAAAGTGT.....................................................................................................1811.00100010
.....................................................................................................................................................................................................................................................................................................G---T--TGGGTCT-TTTT---------TGCGGCTGGA...2311.00100100
.................................................................................................................................................................................................................................................................................GTTCTACTGA------GCGTG---T--TGGGTC............................2211.00100100
.................................................................................................................................................................................................................................................................................GTTCTACTGA------GCGTG---T--TGGGTCT-TT........................2511.00101000
............................................................................................................................................................................................................................................AATGTTACTGTCCACCTCCTCTT...........................................................................2311.00100100
..........................................................................................................................................................................................................................................GAAATGTTACTGTCCACCTCC...............................................................................2111.00100010
...........................................................................................................................................................................................................GAGAGAC----------A-GAAAAAAGTGTC....................................................................................................2011.00100100
............................................................................................................................................................................................................................A-GAAAAAAGTGTCGAAATGTTACT.........................................................................................2411.00100010
...............................................................................................................................................................................................................................................................................TCGTTCTACTGA------GCGTG---T--TGGGT.............................2311.00100010
......................................................................................................................................................................................AAATAAATAAA---------AGAGAGAC----------A-GA..............................................................................................................2211.00100010
...................................................................................................................................................................................AGAAAATAAATAAA---------AGAGAGA.............................................................................................................................2111.00100010
..................................................................................................................................................................................................................................................................TTTAGTAATCTAATCGTTCTACTGA------GCG..........................................2811.00101000
..........................................................................................................................................................................................AAATAAA---------AGAGAGAC----------A-GAAAAAAGT.......................................................................................................2511.00100010
....................................................................................................................................ACTTTA---GTTGTGCCACGGAC...................................................................................................................................................................................2011.00110000
...........................................................................................................................................................................................AATAAA---------AGAGAGAC----------A-GAAAAAA.........................................................................................................2211.00100010
..........................................................................................................................................................CATTGACACGATCAGTCGA.................................................................................................................................................................1911.00100010
..............................................................................................................................................................................................AAA---------AGAGAGAC----------A-GAAAAA..........................................................................................................1821.00200020
.............................................................................................................................................................................................TAAA---------AGAGAGAC----------A-GAAAAAAGT.......................................................................................................2211.00100010
............................................................................................................................................................................................................................A-GAAAAAAGTGTCGAAATGTTACTGT.......................................................................................2611.00100100
.........................................................................................................................................................................................................................................CGAAATGTTACTGTCCAC...................................................................................1811.00100010
..................................................................................AACCG-------AATTGAAGTGG---------AAGT........................................................................................................................................................................................................................2011.00100010
......................................................................................G-------AATTGAAGTGG---------AAGTGGAAGCG.................................................................................................................................................................................................................2311.00100010
...............................................................................................................................................................................................AA---------AGAGAGAC----------A-GAAAAAAGTGTC....................................................................................................2311.00100100
....................................................................................................................................................................................................................................................................................CTACTGA------GCGTG---T--TGGGTCT-T.........................2111.00100010
..............................................................................................................................................................................................AAA---------AGAGAGAC----------A-GAAAAAA.........................................................................................................1920.50100010
........................................................................................................................................................................................ATAAATAAA---------AGAGAGAC----------A-................................................................................................................1820.50100010
...............................................................................................................................................................................AACAAGAAAATAAATAAA---------A...................................................................................................................................1920.50100010
........................................................................................................................................................................................ATAAATAAA---------AGAGAGAC----------A-G...............................................................................................................1920.50100010
.....................................................................AAAAAAAAAAAAAAACCG-------AA..............................................................................................................................................................................................................................................20200.05100010
droVir3
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTAATCGCGCTGTT------------G------TG------CCTCTGCCTATCTCTGGGCCCGTCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................AATCTAATCGCGCTGTT------------G------TG------CCTCT.....................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AATCTAATCGCGCTGTT------------G------TG------CCT.......................2311.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
C---------------------------------TTTGCAGATAACGAGCACA-----CGGCACTCGA-AT---TAGC-------CAAAAATAAAATAAACAAAATTGAACAGCGACT---GGTG-CG-AGAGCCTCA---GTTGTTTTACGAGCTTCGGCGCGCGCGCACACACA-------------CATCAGATTCTCTGGA-------AA------------AATCTGTGACAATGCT---------------GCGAGCTAATCTAATCGGACTGCT------------GTGCCTCTGCCTGT------------CTCTGGGCCCGGCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................CTAATCGGACTGCT------------GTGCCT...................................2013.003100002
.........................................................................................................................................................................................................................................GACAATGCT---------------GCGAGCTAAT...................................................................1912.002100001
...................................................................................................................................................................................................ATTCTCTGGA-------AA------------AATCTGT.....................................................................................................1911.001100000
...................................................................................................................................................TTACGAGCTTCGGCGCGCGC.......................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................GACAATGCT---------------GCGAGCTAATCTAATCGGAC.........................................................2911.001100000
.........................................................................................................................................................................................................................................GACAATGCT---------------GCGAGCTAATCTAATCGG...........................................................2711.001100000
..................................................................................................................................................................................................................................................................CGAGCTAATCTAATCGGACTGCT------------GTGC.....................................2711.001000001
...................................................................................................................................................................................................................................ATCTGTGACAATGCT---------------GCGAGC.......................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................TCTGCCTGT------------CTCTGGGCCCGG...2111.001000010
...................................................................................................................................................................................................................................................................................ACTGCT------------GTGCCTCTGCCTGT------------CTCTGGGC.......2811.001100000
.................................................................................................AAACAAAATTGAACAGCGACT---G....................................................................................................................................................................................................................2211.001100000
..........................................................................................................TGAACAGCGACT---GGTG-CG-AGA..........................................................................................................................................................................................................2111.001100000
................................................................................................................................................GTTTTACGAGCTTCGGCGCGCGC.......................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................GCTAATCTAATCGGACTGCT------------GTGC.....................................2411.001000001
...........................................................................................................................................................................................................GA-------AA------------AATCTGTGACAATGCT---------------GCG..........................................................................2311.001100000
...........................................................................................................GAACAGCGACT---GGTG-CG-AGAGCCTC.....................................................................................................................................................................................................2511.001000001
....................................................................................................................................................................................................TTCTCTGGA-------AA------------AATCTGTGAC..................................................................................................2111.001100000
...............................................................................................................................................TGTTTTACGAGCTTCGGCGCG..........................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................AATCTGTGACAATGCT---------------GCGAG........................................................................2111.001100000
.......................................................................................................................................................................................................................................GTGACAATGCT---------------GCGAGCTAATCT.................................................................2311.001000100
.......................................................................................................................................................................................................TCTGGA-------AA------------AATCTGTGAC..................................................................................................1811.001100000
..............................................................................................................................................................................................................................................................................ATCGGACTGCT------------GTGCCTCTGC...............................2111.001100000
.......................................................................................................................................................................................................TCTGGA-------AA------------AATCTGTGACAATGCT---------------G............................................................................2511.001100000
...............................................................................................................................................................................................................................................GCT---------------GCGAGCTAATCTAATCGGA..........................................................2211.001100000
.........................................................................................................................................................................................................................................................................ATCTAATCGGACTGCT------------GT.......................................1811.001100000
....................................................................................................................................................................CGCGCACACACA-------------CATCAGATTCTCT....................................................................................................................................2511.001100000
...................................................................................................................................................................................................................................................................GAGCTAATCTAATCGGACT........................................................1911.001000001
............................................................................................................................................................................................................................................................................................................TGCCTGT------------CTCTGGGCCCGG...1911.001100000
....................................................................................................................................................................................................................AA------------AATCTGTGACAATGCT---------------G............................................................................1911.001100000
........................................................................................................................................................................................................................................................................AATCTAATCGGACTGCT------------GTGCCTCTGC...............................2711.001100000
droGri2
T-T-----------C----AAT------------CTTTCAGATAAGAGCACA------CGGTACTTGAGA-----CCG-------GTCAACAAAAATCGACAGTACTGA------------GCAAC---TGGGTCTCA---GTTGCTCTGCGCACAGTGAAACGAACACAAATCAG--------------------------GGA-------AA----------------------AATGCT---GCC---------ACGTTGTAATCTAATCGCGGTACTCT------GCATG------TGCCTCTGCCTGTTCCTT------GGACTGGCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................TGAAACGAACACAAATCAG--------------------------GG..................................................................................................................................2111.00110
...................................................................................................................................................................................................................................................................GTTGTAATCTAATCGCGGT........................................................1911.00110
.......................................................................................................................................................................................................................................................................................CTCT------GCATG------TGCCTCTGCCTGT.....................2211.00110
...................................................................................................................................................................................................................................................................................GGTACTCT------GCATG------TGCCTCTGCCTG......................2511.00110
............................................................................................................................................................................................................................................................................TAATCGCGGTACTCT------GCA..........................................1811.00110
dp5
G---CC------AC---CCAAT-----------CATTTCAGATAGCGTGGGG----------------------GCAT-------CGAAACTGAAATCGGAGCTTCTTA------------AGTGCCACCAGACATCA---GTCGAAGTACGGACGTAGTCGGGATTAGACGAAC--------------------------------TAT-----------------------GAGAATGCT---T---GGCCGAAGATATTATAATCTTATCGCTGTTCTGGCTGTGGGCCTCTTCATGTGCGTCT------------GCCCAGATCCGGTTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................TGTGGGCCTCTTCATGTGCGT.............................2112.0020000200000
..........................................................................................................................................................................................................................................AGAATGCT---T---GGCCGAAGATATT........................................................................2211.0010000001000
......................................................................................................................................ATCA---GTCGAAGTACGGACG..................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................................................................ATAATCTTATCGCTGTTCTGGCTGT...............................................2511.0010000001000
.......................................................................................................................................................................AGACGAAC--------------------------------TAT-----------------------GAGAATGCT---T---GGC..................................................................................2411.0010010000000
.............................................................................................................................................................................................................................................................................TATCGCTGTTCTGGCTGTGGGCCTCTT......................................2711.0010100000000
.............................................................................................................................................GTCGAAGTACGGACGTAGTCGGGAT........................................................................................................................................................................2511.0010100000000
..................................................................................................................................................AGTACGGACGTAGTCGGGATTAGA....................................................................................................................................................................2411.0010100000000
..............................................................................................................................................................................................................................................................................................TGGGCCTCTTCATGTGCGTC............................2011.0010000001000
........................................................................................................................................................................................................................................................................................................CATGTGCGTCT------------GCCCAGATCCGGTT.2511.0010100000000
....................................................................................................................................................................ATTAGACGAAC--------------------------------TAT-----------------------GAGAATGCT---T---GGC..................................................................................2711.0010010000000
.....................................................................................................................................................ACGGACGTAGTCGGGATTAGACGAAC--------------------------------T..............................................................................................................................2711.0010000100000
.........................................................................................................................................................................ACGAAC--------------------------------TAT-----------------------GAGAATGCT---T---GGC..................................................................................2211.0010010000000
.............................................................................................................................................................................AC--------------------------------TAT-----------------------GAGAATGCT---T---GGCCGAAGAT...........................................................................2511.0010010000000
...................................................................................................................................................................GATTAGACGAAC--------------------------------TAT-----------------------GAGAATGCT---T---GGC..................................................................................2811.0010010000000
.....................................................................................................................................................................TTAGACGAAC--------------------------------TAT-----------------------GAGAATGCT---T---GGC..................................................................................2611.0010010000000
...............................................................................................................................................CGAAGTACGGACGTAGTCGGGA.........................................................................................................................................................................2211.0010000001000
.................................................................................................................................................................................................................T-----------------------GAGAATGCT---T---GGCCGAAGATATT........................................................................2411.0010000001000
......................................................................................................................................ATCA---GTCGAAGTACGGACGTA................................................................................................................................................................................2111.0010000100000
.............................................................................................................................................................................................................................................................................TATCGCTGTTCTGGCTGTGGGCC..........................................2311.0010100000000
...............................................................................................................................................CGAAGTACGGACGTAGTCGGGATTAGA....................................................................................................................................................................2711.0010100000000
.....................................................................................................................................................ACGGACGTAGTCGGGATT.......................................................................................................................................................................1811.0010000100000
................................................................................................................................................................................................................................................................................CGCTGTTCTGGCTGTGGGC...........................................1911.0010100000000
...............................................................................................................................................CGAAGTACGGACGTAGTC.............................................................................................................................................................................1811.0010000000001
droPer2
G---CC------AC---CCAAT-----------CATTTCAGATAGCGTGGGG----------------------GCAT-------CGAAACTGAAATCGGAGCTTCTTA------------AGTGCCACCAGACATCA---GTCGAAGTACGGACCTAGTCGGGATTAGACGAAC--------------------------------TAT-----------------------GAGAATGCT------TGTCCGAAGATATTATAATCTTATCGCTGTTCTGGCTGTGGGCCTCTTCATGTGCGTCT------------GCCCAGATCCGGTTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................GACCTAGTCGGGATTAGAC...................................................................................................................................................................1915.005500000
...................................................................................................................................................GTACGGACCTAGTCGGGATTAGAC...................................................................................................................................................................2415.005500000
..........................................................................................................................................................CCTAGTCGGGATTAGACGAAC--------------------------------T..............................................................................................................................2214.004400000
.............................................................................................................................................................................................................................................................................TATCGCTGTTCTGGCTGTGGGCCT.........................................2413.003300000
.........................................................................................................................................................................................................................................................................ATCTTATCGCTGTTCTGGCTGTGGGCCT.........................................2813.003300000
...........................................................................................................................................................CTAGTCGGGATTAGACGAAC--------------------------------TAT-----------------------GAGAA................................................................................................2813.003300000
...............................................................................................................................................CGAAGTACGGACCTAGTCGGG..........................................................................................................................................................................2112.002101000
........................................................................................................................................................................................................................................................................AATCTTATCGCTGTTCTG....................................................1812.002200000
......................................................................................................................................................CGGACCTAGTCGGGATTAGACGAAC--------------------------------T..............................................................................................................................2612.002200000
..............................................................................................................................................................................................................................................................................................................CGTCT------------GCCCAGATCCGGTTG2012.002200000
...................................................................................................................................................................................................................................................................................................CTCTTCATGTGCGTCT------------GC.............1812.002200000
...........................................................................................................................................................CTAGTCGGGATTAGACGAAC--------------------------------...............................................................................................................................2012.002200000
....................................................................................................................................................TACGGACCTAGTCGGGATTAGACGAAC--------------------------------T..............................................................................................................................2812.002200000
...................................................................................................................................................................................................................................................................ATTATAATCTTATCGCTGTTCT.....................................................2212.002101000
....................................................................................................................................................TACGGACCTAGTCGGGATTAGACGA.................................................................................................................................................................2512.002200000
.........................................................................................................................................A---GTCGAAGTACGGACCTAGT..............................................................................................................................................................................2012.002200000
...............................................................................................................................................CGAAGTACGGACCTAGTCGGGATT.......................................................................................................................................................................2412.002200000
...................................................................................................................................................................GATTAGACGAAC--------------------------------TAT-----------------------GAGAATGCT------TGT...................................................................................2712.002200000
...........................................................................................................................................................................GAAC--------------------------------TAT-----------------------GAGAATGCT------TGTCCGAAG.............................................................................2511.001100000
....................................................................................................................................................TACGGACCTAGTCGGGATTAGACT..................................................................................................................................................................2411.001100000
.....................................................................................................................................................ACGGACCTAGTCGGGATT.......................................................................................................................................................................1811.001010000
............................................................................AT-------CGAAACTGAAATCGGAGCTTC....................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................................................................................................................................TATCGCTGTTCTGGCTGTG..............................................1911.001010000
.........................................................................................................................................A---GTCGAAGTACGGACCTAGTC.............................................................................................................................................................................2111.001100000
...................................................................................................................................................GTACGGACCTAGTCGGGATTAGACGAAC--------------------------------T..............................................................................................................................2911.001100000
.............................................................................................................................................................................................................................................................................TATCGCTGTTCTGGCTGTGGGG...........................................2211.001001000
..............................................................................................................................................................................C--------------------------------TAT-----------------------GAGAATGCT------TGTCCGAAGAT...........................................................................2411.001000001
.....................................................................................................................................................ACGGACCTAGTCGGGATTAGACGAAC--------------------------------T..............................................................................................................................2711.001100000
.........................................................................................................................................................................................................................................................................ATCTTATCGCTGTTCTGGCTGT...............................................2211.001100000
.........................................................................................................................................................ACCTAGTCGGGATTAGAC...................................................................................................................................................................1811.001100000
....................................................................................................................................ACATCA---GTCGAAGTACGGACCTAGTC.............................................................................................................................................................................2611.001100000
...............................................................................................................................................CGAAGTACGGACCTAGTCG............................................................................................................................................................................1911.001010000
................................................................................................................................................................CGGGATTAGACGAAC--------------------------------TAT-----------------------GAGAAT...............................................................................................2411.001100000
............................................................................................................................................................................................................................................................................TTATCGCTGTTCTGGCTGTG..............................................2011.001100000
.........................................................................................................................................................................................................................................................................ATCTTATCGCTGTTCTGGCTGTGGGCC..........................................2711.001100000
................................................................................................................................................................................................................................................................................CGCTGTTCTGGCTGTGGGCCT.........................................2111.001100000
......................................................................................................................................ATCA---GTCGAAGTACGGACCTAGTCGGGA.........................................................................................................................................................................2811.001000001
..........................................................................................................................................................................CGAAC--------------------------------TAT-----------------------GAGAATGCT------TGTCCGAAGAT...........................................................................2811.001100000
...........................................................................................................................................................................GAAC--------------------------------TAT-----------------------GAGAATGCT------TGTCCGAAGAT...........................................................................2711.001100000
...................................................................................................................................................................................................................................................................ATTATAATCTTATCGCTGTTCTGGC..................................................2511.001100000
................................................................................................................................................GAAGTACGGACCTAGTCGG...........................................................................................................................................................................1911.001001000
..............................................................................................................................................................................................................................................................................ATCGCTGTTCTGGCTGTGGGCCT.........................................2311.001100000
...............................................................................................................................................CGAAGTACGGACCTAGTCGGGATTAGAC...................................................................................................................................................................2811.001100000
...........................................................................................................................................................................................................................................................................CTTATCGCTGTTCTGGCTGTGGGCCTCT.......................................2811.001100000
...........................................................................................................................................................................................................................................................................CTTATCGCTGTTCTGGCTGTGGGCCT.........................................2611.001100000
.........................................................................................................................................................................ACGAAC--------------------------------TAT-----------------------GAGAATGCT------TGTCCGAAGAT...........................................................................2911.001100000
droAna3
CTAACC------ACC--TCAAT-----------TGTTTCAGATAGAG-------------------------------------------CCGAAATCGGAGCTCTTCA------------ATTGCCG-TGGACGTCA---GTCGCAGAGCGAAACTAGTCGTGATCGGACGGAA--------------------------------TACGGAA-CTTAAC-TC-------TTCAGCATGCT---GCCCACCGCTATACGCCGTAATCTAATCGCCGGGCTCGCTTTTGGCCTG------TGCGTCTGCCTCTGTTTCGGACCCAGTCCGGCGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................CGCTTTTGGCCTG------TGCGTCTGCCTCT.....................2611.001100000
.......................................................................................................................................................GAAACTAGTCGTGATCGGA....................................................................................................................................................................1911.001001000
.....................................................................................................................................................................................................................A-CTTAAC-TC-------TTCAGCATGCT---GCCCACC..................................................................................2711.001010000
.........................................................................................................................................A---GTCGCAGAGCGAAACTAGTC.............................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................GCCGGGCTCGCTTTTGGC...........................................1811.001010000
.............................................................................................................................................................................................................................................ATGCT---GCCCACCGCTATACGCCGTAATCT.................................................................2911.001010000
................................................................................................................................................................................................................................................................................CGCCGGGCTCGCTTTTGGC...........................................1911.001010000
..............................................................................................................................................................................................................................................................TATACGCCGTAATCTAATCGCCGG........................................................2411.001010000
.....................................................................................................GCTCTTCA------------ATTGCCG-TGGACGT......................................................................................................................................................................................................2211.001100000
.........................................................................................................................ATTGCCG-TGGACGTCA---GTCGCAGAGC.......................................................................................................................................................................................2611.001010000
...............................................................................................................................................................................................................................C-------TTCAGCATGCT---GCCCACCGCT...............................................................................2211.001001000
.........................................................................................................................................................AACTAGTCGTGATCGGACGGA................................................................................................................................................................2111.001000010
............................................................................................................A------------ATTGCCG-TGGACGTCA---GT...............................................................................................................................................................................................1911.001010000
..............................................................................................................................................................GTCGTGATCGGACGGAA--------------------------------TACGGA.........................................................................................................................2311.001000010
......................................................................................................................................GTCA---GTCGCAGAGCGAAACTAGTCGTG..........................................................................................................................................................................2711.001000010
..........................................................................................................................................................................................................................AAC-TC-------TTCAGCATGCT---GCCCAC...................................................................................2211.001001000
..................................................................................................................................................AGAGCGAAACTAGTCGTGATCG......................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................GTCTGCCTCTGTTTCGGACCCAGTCCGGC..2911.001100000
....................................................................................................................................................................ATCGGACGGAA--------------------------------TACGGAA-CTT....................................................................................................................2111.001010000
..............................................................................................................................................................................A--------------------------------TACGGAA-CTTAAC-TC-------TTCA...................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................CGTAATCTAATCGCCGGGCT.....................................................2011.001010000
..............................................................................................................................................................................................................................................................................ATCGCCGGGCTCGCTTTTGGC...........................................2111.001010000
.......................................................................................................................................................GAAACTAGTCGTGATCGGACG..................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................................CTGCCTCTGTTTCGGACCCAGTCCGGC..2711.001010000
droBip1
CTAACC------ACC--TCAAT-----------CGTTCCAGATAGAG-------------------------------------------CCGAAATCGGAGCTCCTCA------------ATTGCCG-TGGACGTCA---GTCGCAGAGCGAAACTAGTCGTGATCGGACGGAA--------------------------------TACGGAA-CTTAAC-TC-------TTCAGCATGCT---GCCCACCGCCATACGCCGTAATCTAATCGCCGGGCTCGCTTTGGGCCTG------TGCGTCTGCCTCTGCTTCGGACCGAGTCCGGCGGSizeHit CountTotal NormTotal
No Reads
droKik1
C-AACGAATCCCAC---ACAAT-----------CGTTTCAGATAATATTCGAAT---------------A----GCGA-------CAAAGCCCAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGTCGTGCGAACCTTGTTGCGATCGGACCTG-T--------------------CACCT-CGGA------GAACTAACC-A---TCGTCGTCGTCATGCT---GC---------TGCTCCCTAATCTTATCGCCGGCCTCACTGTGGGCCTG------TGCGTCTGCCTCTGCCTTGGACCGAGTCTGGTAGSizeHit CountTotal NormTotal
No Reads
droFic1
G-AACC------ACCGACCAAT-----------CGTTTCAGATAGGCCGCCT-----------------------CGT-------CGAAACTAAAATCGGAGCTCCTCA------------ATCGCGG-TGGACGTCA---GTCGCAGAGCGGACCTTTAAGCGATCGGAGCCAAA--------------------------CGGAATAC----------T-GCAAACCGCTTCGCCATGCT---GCCCATCATCATCCGCCGTAATCTTATCGCCGTGTTCGCTTTCGGCCTG------TGCGTCTGTCTCGGTTTTGGCCCTTGTCCGGCGGSizeHit CountTotal NormTotal
No Reads
droEle1
G-AACC------CCA-TCAAAT-----------CGTTTCAGATAGGGCGCGA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGCAGAGCGGACCTTCAAGCGATCGGACCCTAA--------------------------CGG-------AA-TCTACC-GC--T------CATCATGCT---GCCCGTCGTCATCCGCCGTAATCTAATCGCCGTGCTCGCAGTGGGCCTG------TGCGTCTGTCTTT------------GTCCGGTGGSizeHit CountTotal NormTotal
No Reads
droRho1
G-AACC------ACA----AAT-----------AGTTTCAGATAGGGCGCGA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCT-CAGACGTCA---GTCGCAGAGCGGACCTTCAAGCGATCGGACCCAAA--------------------------CGG-------AA-TCAACC-GC--T------CATCATGCC---GCCCGTCGTCATCCGCCGTAATCTAATCGCCGTGCTGGCGTTTTGCCTG------TGCGTCTGTCTT------------GGTCCGGTGGSizeHit CountTotal NormTotal
No Reads
droBia1
G-AACC------ACC----AAT-----------CGTTTCAGATAGGCCGCCA----------------------CCAT-------CGACACCGAAATCGGAGCTCCTCA------------ATCGCCG-CA-ACGTCA---GTCGCAGAGTGGACCTAGTGGGGATCGGACC-TAT--------------------------CGG-------AA-TCAACC-GC--TCGTCGCCATCATGCT---GCCC---GTCATCCGCCGTAATCTTATCGCCT---------TGGGCCTG------TGCGTCTGTCTTTGCTTTGGACCGGGTCCGGTGGSizeHit CountTotal NormTotal
No Reads
droTak1
G-AACC------ACC----AAT-----------CGTTTCAGATAGGGCGCCAACCCGG-----------A----CCAT-------CGAAACTAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGCAGAGTGGACCTAGTGGCGATCGGTTC-TAA--------------------------CGGA------AA-TCTACTAGC--T---CATCATCATGTT---GCCC---GTCATCCGTCGTAATCTTATCGCCCTGCTGGCTTTGGGCCTG------TGCGTCTGTCTTTGTTTCGGACCCGGTCCGGTGGSizeHit CountTotal NormTotal
No Reads
droEug1
G-AACC------ACC----AAT-----------TGTTTCAGATAGGGCGCGA-----------------------CAT-------CGAAACTAAAATCGGAGCTCCTCA------------ATTGCTG-CAGACGTCGGACGTCGGAGAGTGCAACTAATCGTGATCGGACTCTAC--------------------------CGA-------AA-TCTAAC-GC--T------CACCATGCT---GCCC---ATCATCCGTCGTAATCTTATCGCCGTGCTCGCTATTGGCTTA------TGCGTCTCTCTAAGTTGTGGACCGAGTCTGGTGGSizeHit CountTotal NormTotal
No Reads
dm3
G-AACC------GCC----AAT-----------TGTTTCAGATAGGGCGCTA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGCAGAGTGGACCTAGTCGCGATCGGACCCTAA--------------------------CGA-------AA-TCTACC-GC--T------CATCATGTC---GCCA---GTCATCCGCCGTAATCTTATCGCCTGTCTCACTTTGGGCCTG------TGCGTCTGTCTTAGCTTCGGACCGGGTCCGGTGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................ACCAAAATCGGAGCTCCTCA------------ATCGCC...............................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TTTGGGCCTG------TGCGTCTGTCTTAGC...................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010100000
.........................................................................................................................................................................................................................................CATCATGTC---GCCA---GTCATC............................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TA-----------------------CAT-------CGAAACCAAAATCGGAGCTCC....................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
....................................................................................................................................................AGTGGACCTAGTCGCGATCGGAC...................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000
......................................................................................................................................................TGGACCTAGTCGCGATCGGACCCTA...............................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGC...........................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................TGGACCTAGTCGCGATCGG.....................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000
.....................................................................................................................................................................................................................................................................................GTCTCACTTTGGGCCTG------TGC...............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CGCAGAGTGGACCTAGTCG............................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................TAGGGCGCTA-----------------------CAT-------CGAAACCAAAATCGG..........................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ACTTTGGGCCTG------TGCGTC............................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CACTTTGGGCCTG------TGCGTCTGTCTTAGC...................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000
.......................................................................................................................................................GGACCTAGTCGCGATCGGA....................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GTCTCACTTTGGGCCTG------TG................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AGTCGCGATCGGACCCTA...............................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TCA------------ATCGCCG-CAGACGTCA---GTCGCAGA.........................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GACGTCA---GTCGCAGAGTGGACCTAGT..............................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGA-------AA-TCTACC-GC--T------.....................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCCTCA------------ATCGCCG-CAGACG.......................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................A---GTCGCAGAGTGGACCTAGTCGCGA.........................................................................................................................................................................2511.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GATAGGGCGCTA-----------------------CAT-------CGAAAC...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGCGATC.......................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGTCTTAGCTTCGGACCGG.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CTCACTTTGGGCCTG------TGCGTCT...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................GCCGTAATCTTATCGCCT.........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGCCGTAATCTTATCGCCTGTCTCACTT................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GTCA---GTCGCAGAGTGGACCTA................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GCAGAGTGGACCTAGTCGCG..........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CGTCA---GTCGCAGAGTGG.....................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CATGTC---GCCA---GTCATCCGCCGTAA....................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TTTGGGCCTG------TGCGTCTGTCTTA.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGA-------AA-T......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGAAACCAAAATCGGAGCTCCTC..................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ATAGGGCGCTA-----------------------CAT-------CGAA.....................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TCTGTCTTAGCTTCGGACCGGGTC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................GCTCCTCA------------ATCGCCG-CAGACGTCA---GTC..............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GCCTGTCTCACTTTGGGCCTG------TGCGTC............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TCGCAGAGTGGACCTAGTCGC...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................GTGGACCTAGTCGCGATCGGAC...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................TCA---GTCGCAGAGTGGACCTAGTCGCGAT........................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGCGATCGGA....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AATCTTATCGCCTGTCTC....................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ATCCGCCGTAATCTTATCGCCTGTCTC....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CTGTCTCACTTTGGGCCTG------..................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTTCGGACCGGGTCCGGTGG2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CTAA--------------------------CGA-------AA-TCTACC-GC--T------CATC.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................C-GC--T------CATCATGTC---GCCA---GTCATCCGC.........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................ATCGGAGCTCCTCA------------ATCGCC...............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GAGTGGACCTAGTCGCGATC.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................CTGTCTCACTTTGGGCCTG------T.................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GGCGCTA-----------------------CAT-------CGAAACCAAAATCGGAGC.......................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TCTGTCTTAGCTTCGGACCGGGTCCGGTG.2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................AGGGCGCTA-----------------------CAT-------CGAAACCA.................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................TCTCACTTTGGGCCTG------TGCGTC............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ACGTCA---GTCGCAGAGTGGACCT.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCCTCA------------ATCGCCG-CAGACGTCA---GTCGCA...........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................G------TGCGTCTGTCTTAGCTTC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CCAAAATCGGAGCTCCTCA------------ATCGCC...............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................A---GTCGCAGAGTGGACCTAGTCGCG..........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGTCTTAGCTTCGGACCGGGTCCGG...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..........................................................................................................................................................................................................................................ATCATGTC---GCCA---GTCATCCGCCGT......................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGAAACCAAAATCGGAGCTCCTCA------------AT...................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GTCA---GTCGCAGAGTGGAC...................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................GGACCTAGTCGCGATCGGAC...................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................GGAGCTCCTCA------------ATCGCCG-CAGACGTCA---G................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................CTCCTCA------------ATCGCCG-CAGACGTCA---GTC..............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGCGTCTGTCTTAGCTTCG...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................C-GC--T------CATCATGTC---GCCA---GT................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGAAACCAAAATCGGAGC.......................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................GGACCTAGTCGCGATCGGACCC.................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................GC--T------CATCATGTC---GCCA---GT................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GAGTGGACCTAGTCGCGATCGGACCCTA...............................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TGGACCTAGTCGCGATCGGA....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................CCTCA------------ATCGCCG-CAGACGTCA---GTCGCAG..........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATCGCCG-CAGACGTCA---GTC..............................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................G-CAGACGTCA---GTCGCAGAGTGGACCTAGT..............................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TTTGGGCCTG------TGCGTCTGTCTTAGCTTCG...............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................TCTGTCTTAGCTTCGGACCGGGTCCGG...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GAAACCAAAATCGGAGCTCCTCA------------ATC..................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................CC-GC--T------CATCATGTC---GCCA---GT................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................................................TAGCTTCGGACCGGGTCCGGT..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TGGACCTAGTCGCGATCGGAC...................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................AA-TCTACC-GC--T------CATCATGTC---GCCA---GT................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CGCGATCGGACCCTAA--------------------------CGA-------TC-.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GCCTGTCTCACTTTGGGCCT.........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................AA--------------------------CGA-------AA-TCTACC-GC--T------CATCATGTC---GCC......................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TAGGGCGCTA-----------------------CAT-------CGAAACCAAAATCGGA.........................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GGACCCTAA--------------------------CGA-------AA-TCTA...................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AGTGGACCTAGTCGCGATCGG.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................TCGCAGAGTGGACCTAGTCGCGATCGGAC...................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................A---GTCGCAGAGTGGACCTAG...............................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CGCAGAGTGGACCTAGTC.............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGTTTCAGATAGGGCGCTA-----------------------CAT-------CGAAAC...................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AGTGGACCTAGTCGCGATCGGACCCT................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................AGTCGCGATCGGACCCT................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CGCAGAGTGGACCTAGT..............................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TTGGGCCTG------TGCGTCTGTCTTAGC...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................TCGCAGAGTGGACCTAGTCGCG..........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................A---GTCATCCGCCGTAATCTTAT..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................AGCTCCTCA------------ATCGCCG-CAGACGT......................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GGACCTAGTCGCGATCGGACCCTAA--------------------------CGA-------..........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................CGCCG-CAGACGTCA---GTCGCAGAGTG......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................................................................................................................................................CTCACTTTGGGCCTG------TGCG..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TCATCCGCCGTAATCTTATCGCCTG........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTTAGCTTCGGACCGGGTCCGGTG.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TCGCCG-CAGACGTCA---GTCGCAGAGTGGAC...................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................A-----------------------CAT-------CGAAACCAAAATCGGAGCTCC....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................CCTAGTCGCGATCGGACCCTAA--------------------------CGA-------..........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................CAGAGTGGACCTAGTCGC...........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................ACCAAAATCGGAGCTCCTCA------------ATCGCCG-C............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................T-----------TGTTTCAGATAGGGCGCTA-----------------------CAT-------CGAAA....................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGA-------AA-TCTACC-GC--............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................ACTTTGGGCCTG------TGCGCA............................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
droSim2
G-AACC------GCC----AAT-----------CGTTTCAGATAGGGCGGTA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTTGCTGAGTGGACCTAGTCGCGATCGGACCCTAA--------------------------CGG-------AA-TCTACC-GC--T------CATCATGTC---GCCA---GTCATCCGCCGTAATCTTATCGCCTGGCTAACTTTGGGCCTG------TGCGTCTGTCTTAGCTTCGGACCGGGTCCGGTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGG-------AA-TCTACC-GC--T------.....................................................................................................2716.00603300000000000000
........................................................................................................................................................................................................................................................................AATCTTATCGCCTGGCTAACTTTGGGC...........................................2715.00501400000000000000
.........................................................................................................................ATCGCCG-CAGACGTCA---GTTGCTG..........................................................................................................................................................................................2313.00300300000000000000
........................................................................................................................................................GACCTAGTCGCGATCGGAC...................................................................................................................................................................1913.00301200000000000000
...............................................................................................................................................................................................................................................................ATCCGCCGTAATCTTATCGCCTGGC......................................................2512.00200200000000000000
....................................................................................................................................................AGTGGACCTAGTCGCGATCGGAC...................................................................................................................................................................2312.00200200000000000000
.........................................................................................................................................................................................................................................CATCATGTC---GCCA---GTCATCCGCC........................................................................2312.00200200000000000000
.........................................................................................................................................A---GTTGCTGAGTGGACCTA................................................................................................................................................................................1812.00202000000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGG-------AA-TCTAC..................................................................................................................2312.00200200000000000000
.......................................................................................................................................................GGACCTAGTCGCGATCGGAC...................................................................................................................................................................2012.00200200000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGG-------AA-T......................................................................................................................1911.00100100000000000000
........................................................................................................................................................GACCTAGTCGCGATCGGACCC.................................................................................................................................................................2111.00100100000000000000
.......................................................................................................................................................GGACCTAGTCGCGATCGG.....................................................................................................................................................................1811.00100100000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGG-------AA-TCTACC-GC--G------.....................................................................................................2711.00101000000000000000
.........................................................................................................CTCA------------ATCGCCG-CAGACGTCA---GTT..............................................................................................................................................................................................2311.00100010000000000000
...................................................................................................................................................GAGTGGACCTAGTCGCGATCGGACC..................................................................................................................................................................2511.00100100000000000000
.........................................................................................................................................................................................................................................................................................AACTTTGGGCCTG------TGCGTCTGTCTTAGC...................2811.00100010000000000000
...................................................................................................................................................................................................................................................................GCCGTAATCTTATCGCCT.........................................................1811.00100100000000000000
.......................................................................................................................................................................................................................................................................................CTAACTTTGGGCCTG------TGCGTCTGT.........................2411.00100100000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGG-------AA-TCTACC-GC--............................................................................................................2611.00101000000000000000
.............................................................................................................................................GTTGCTGAGTGGACCTAGTCGCGATCG......................................................................................................................................................................2711.00100010000000000000
......................................................................................................................................................................................................................................................................GTAATCTTATCGCCTGGCTAACTTTGGGC...........................................2911.00100010000000000000
...................................................................................................................................................GAGTGGACCTAGTCGCGATCGGACCC.................................................................................................................................................................2611.00100100000000000000
..................................................................................................................................................................................................................................................................................................................TGTCTTAGCTTCGGACCGGGTCCGGTGG2811.00100010000000000000
......................................................................................................................................................................CGGACCCTAA--------------------------CGG-------AA-TCT....................................................................................................................1811.00100010000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGG-------AA-TCTACC-................................................................................................................2411.00100100000000000000
................................................................................................................................................................CGCGATCGGACCCTAA--------------------------CGG-------AA-TCTACC-................................................................................................................2711.00101000000000000000
........................................................................................................................................................................................................................................................................AATCTTATCGCCTGGCTAACTTTG..............................................2411.00100100000000000000
........................................................................................................................................................................................................................................................................AATCTTATCGCCTGGCTAACTTTGG.............................................2511.00101000000000000000
...........................................................................CAT-------CGAAACCAAAATCGGA.........................................................................................................................................................................................................................................1911.00100100000000000000
................................................................................................................................................................CGCGATCGGACCCTAA--------------------------CGG-------AA-T......................................................................................................................2211.00100100000000000000
......................................................................................................................................................................................................................................................................GTAATCTTATCGCCTGGC......................................................1811.00100100000000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CGG-------AA-TCTACC-GC--T------C....................................................................................................2811.00100100000000000000
..........................................................................................................................................................CCTAGTCGCGATCGGACC..................................................................................................................................................................1811.00100100000000000000
..................................................................................................................................AGACGTCA---GTTGCTGAGTGGACCT.................................................................................................................................................................................2411.00100100000000000000
.....................................................................................................................................................................................................................................................................................GGCTAACTTTGGGCCTG------TGC...............................2011.00100010000000000000
.........................................................................................ACCAAAATCGGAGCTCCG...................................................................................................................................................................................................................................1811.00100100000000000000
......................................................................................................................................................................................................................................................................GTAATCTTATCGCCTGGCT.....................................................1911.00100100000000000000
droSec2
G-AACC------GCC----AAT-----------CGTTTCAGATAGGGCGCTA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTTGCTGAGTGGACCTAGTCGCGATCGGACCCAAA--------------------------CGG-------AA-TCTACC-GC--T------CATCATGTC---GCCA---GTCATCCGCCGTAATCTTATCGCCTGGCTAACTTTGGGCCTG------TGCGTCTGTCTTAGCTTCGGACCGGGTCCGGTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................TGGACCTAGTCGCGATCGGACC..................................................................................................................................................................2212.0020020
........................................................................................................................................................GACCTAGTCGCGATCGGACCC.................................................................................................................................................................2111.0010010
............................................................................................................................................................................................................................................................................................TTTGGGCCTG------TGCGTCTGTCT.......................2111.0010010
.......................................................................................................................................................................................................................TCTACC-GC--T------CATCATGTC---GC.......................................................................................2011.0010010
.....................................................................................................................................................................................................................A-TCTACC-GC--T------CATCATGTC---GCCA---GT................................................................................2511.0010010
............................................................................AT-------CGAAACCAAAATCGGAGCTCCTC..................................................................................................................................................................................................................................2511.0010100
....................................................................................................................................................................................................................................................................................................................TCTTAGCTTCGGACCGGGT.......1911.0010010
.......................................................................................................................................................................................................................................................................................CTAACTTTGGGCCTG------TGC...............................1811.0010010
....................................................................................................................................................................................................................AA-TCTACC-GC--T------CATCATGTC---GCC......................................................................................2311.0010010
......................................................................................................................................GTCA---GTTGCTGAGTGGACCTA................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................CTG------TGCGTCTGTCTTAGCTTCGGA.............2411.0010010
.........................................................................................................................................................................................................................................................................................AACTTTGGGCCTG------TGCGTCT...........................2011.0010100
...............................................................................................................................................TGCTGAGTGGACCTAGTCGCGATCGGA....................................................................................................................................................................2711.0010010
.................................................................................................................................................................................................................................................C---GCCA---GTCATCCGCCGTAATC..................................................................2111.0010010
............................................................................................................................GCCG-CAGACGTCA---GTTGCTGA.........................................................................................................................................................................................2111.0010010
....................................................................................................................................................AGTGGACCTAGTCGCGATCG......................................................................................................................................................................2011.0010010
................................................GCTA-----------------------CAT-------CGAAACCAAAATCGGAG........................................................................................................................................................................................................................................2411.0010100
........................................................................................................................................................................................................................................................................................TAACTTTGGGCCTG------TGCGTC............................2011.0010010
...............................................................................................................................G-CAGACGTCA---GTTGCTGAGTGGAC...................................................................................................................................................................................2411.0010010
...................................................................................................................................................................................................................................................................................................CTG------TGCGTCTGTCTTAGCTTCGGACC...........2611.0010010
.................................................................................................CGGAGCTCCTCA------------ATCGCCG-CAGAC........................................................................................................................................................................................................2411.0010010
.........................................................................................................................................................................................................................................................................................AACTTTGGGCCTG------TGCGTCTGTCTT......................2511.0010010
...........................................................................................................................................................................................................................................TCATGTC---GCCA---GTCATCCGCC........................................................................2111.0010010
.......................................................................................................................................................................................................................................................................................CTAACTTTGGGCCTG------TGCGT.............................2011.0010010
......................................................................................................................................................................................................................................................................................GCTAACTTTGGGCCTG------TGC...............................1911.0010010
....................................................................................................AGCTCCTCA------------ATCGCCG-CAGAC........................................................................................................................................................................................................2111.0011000
............................................................................................................................................................................................................................C-GC--T------CATCATGTC---GCCA---GTC...............................................................................2011.0010010
.............................................................................................................................................................................................................................................ATGTC---GCCA---GTCATCCGCC........................................................................1911.0010010
droYak3
A-AACC------GCC----AATTGTT----TCCAATTTCAGATAGGGCTCCA-----------------------CAT-------CGAAACCAAAATCGGAGCTCCTCA------------ATCGCCG-CAGACGTCA---GTCGCAGAGTGGACCTAGTCGCGATCGGACCCTAA--------------------------CTG-------AA-TCTACC-GC--T------CATCATGTC---GCCA---GTCATCCGCCGTAATCTTATCGCCTGGCTCGCATTGGGCCTG------TGCGTCTGTCTTAGCTGGCTACCGGGTCCGGTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................CTG------TGCGTCTGTCTTAGCTGG................2116.00601000050000
...................................................................................................................................................................................................................................................................................................CTG------TGCGTCTGTCTTAGCTGGCT..............2315.00500000050000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGCGATCGGA....................................................................................................................................................................2714.00400100030000
...................................................................................................................................................................................................................................................................................................CTG------TGCGTCTGTCTTAGCT..................1914.00400200020000
...................................................................................................................................................................................................................................................................................................CTG------TGCGTCTGTCTTAGCTGGC...............2213.00300100020000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGC...........................................................................................................................................................................2013.00300000030000
.........................................................................................................................................................................................................................................CATCATGTC---GCCA---GTCATCCGCC........................................................................2313.00300000030000
.......................................................................................................................................................GGACCTAGTCGCGATCGGACCCT................................................................................................................................................................2313.00302100000000
.......................................................................................................................................................GGACCTAGTCGCGATCGGAC...................................................................................................................................................................2012.00201000010000
..............................................................................................................................................................................................................................................TGTC---GCCA---GTCATCCGCCGT......................................................................2012.00201000010000
................................................................................................................................................GCAGAGTGGACCTAGTCGCG..........................................................................................................................................................................2012.00200000020000
........................................................................................................................................................................................................................................................................................TCGCATTGGGCCTG------TGCGTCT...........................2112.00200000020000
.....................................................................................................................................................GTGGACCTAGTCGCGATCGGAC...................................................................................................................................................................2212.00200100010000
...................................................................................................................................................................................................................................................................................................CTG------TGCGTCTGTCTTAGCTGGCTACC...........2612.00200100010000
..........................................................................................................................................................................................................................................ATCATGTC---GCCA---GTCATCCGCCGT......................................................................2412.00200000020000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGCGATCG......................................................................................................................................................................2512.00201010000000
...............................................................................................................................................................................................................................................................ATCCGCCGTAATCTTATCGCCTGGCTC....................................................2712.00220000000000
......................................................................................................................................................................................................................................................................GTAATCTTATCGCCTGGCT.....................................................1912.00210000010000
........................................................................................................................................................................................................................................................................AATCTTATCGCCTGGCTCGCATTGGGC...........................................2712.00200000020000
............................................................................................................A------------ATCGCCG-CAGACGTCA---G................................................................................................................................................................................................1811.00100010000000
.........................................................................................................................................................................ACCCTAA--------------------------CTG-------AA-TCTACC-GC--T------.....................................................................................................2111.00100000010000
......................................................................................................................................................................................................................................................................................GCTCGCATTGGGCCTG------TGCGTC............................2211.00100100000000
.........................................................................................................................................................................................................................................CATCATGTC---GCCA---GTCATCCGCCGT......................................................................2511.00100000010000
.........................................................................................................................................................................................................................................................................................CGCATTGGGCCTG------TGCGTCT...........................2011.00100000010000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CTG-------AA-TCTACC-................................................................................................................2411.00100100000000
........................................................................................................................................................................................................................................................................................TCGCATTGGGCCTG------TGCGTCTGTCTTAGC...................2911.00100000010000
.......................................................................................................................................................................................................................................................................................................................TAGCTGGCTACCGGGTCCGGTGG2311.00101000000000
...............................................................................................................................................................................................................................................................ATCCGCCGTAATCTTATCGCCTGGC......................................................2511.00100100000000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGCGATCGGACC..................................................................................................................................................................2911.00100000010000
...............................................................................................................................G-CAGACGTCA---GTCGCAGAGTGGAC...................................................................................................................................................................................2411.00100100000000
......................................................................................................................................................................................................................................................................................GCTCGCATTGGGCCTG------TGCGTCTGTC........................2611.00100100000000
..........................................................................................CCAAAATCGGAGCTCCTCA------------.....................................................................................................................................................................................................................1911.00101000000000
............................................................................................................................................................................................................................................................................TTATCGCCTGGCTCGCATTGGGC...........................................2311.00100100000000
.........................................................................................................................................................................ACCCTAA--------------------------CTG-------AA-TCTACC-GC--T------CATCA................................................................................................2611.00100100000000
.....................................................................................................................................................GTGGACCTAGTCGCGATCG......................................................................................................................................................................1911.00100000010000
.....................................................................................................................................................................................................................................................................CGTAATCTTATCGCCTGGCC.....................................................2011.00100100000000
.........................................................................................................................................................................................................................................................................................CGCATTGGGCCTG------TGCGTCTGTCTT......................2511.00100100000000
........................................................................................................................................................................................................................................................................................TCGCATTGGGCCTG------TGCGTCTGT.........................2311.00100000010000
......................................................................................................................................................................................................................................................................GTAATCTTATCGCCTGGCTC....................................................2011.00100000010000
............................................................................................................................GCCG-CAGACGTCA---GTCGCAGAGTGGACCTA................................................................................................................................................................................3011.00100000010000
...........................................................................................................................................................CTAGTCGCGATCGGACCCTAA--------------------------C...................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................GCTCGCATTGGGCCTG------TGCGTCT...........................2311.00100000010000
...........................................................................................................................................................................................................................................................................CTTATCGCCTGGCTCGCATTGGGC...........................................2411.00101000000000
............................................................................................................................................................................................................G-------AA-TCTACC-GC--T------CATCATGTC---GCC......................................................................................2411.00100100000000
.....................................................................................................................................................................................................................A-TCTACC-GC--T------CATCATGTC---GCCA---GT................................................................................2511.00101000000000
................................................................................................................................................................CGCGATCGGACCCTAA--------------------------CTG-------..........................................................................................................................1911.00100000010000
.........................................................................................................................................................................................................................................CATCATGTC---GCCA---GTCATCCGCCGTAAT...................................................................2811.00101000000000
............................................................................................................................................................................................................................................................................................ATTGGGCCTG------TGCGTCTGTCT.......................2111.00100100000000
..............................................................................................................................................................................................................................................................CATCCGCCGTAATCTTATCGCCTGG.......................................................2511.00100100000000
.....................................................................................................................................................................................................................................................................................................................CTTAGCTGGCTACCGGGTCCGGTG.2411.00100000010000
...................................................................................................................................................................................................................................................................................................CTG------TGCGTCTGTCTTAGCTGGCTACCGG.........2811.00100000010000
.....................................................................................................................................................................................................................................................................................................G------TGCGTCTGTCTTAGCTGGC...............2011.00100000010000
............................................................................................................................GCCG-CAGACGTCA---GTCGCAGA.........................................................................................................................................................................................2111.00100000100000
..............................................................................................................................................................................................................................................................................................TGGGCCTG------TGCGTCTGTCTTAGCT..................2411.00100000010000
.....................................................................................................................................................................................................................................................................CGTAATCTTATCGCCTGGCT.....................................................2011.00100000010000
................................................................................................................................................................CGCGATCGGACCCTAA--------------------------CTG-------A.........................................................................................................................2011.00110000000000
............................................................................................................................................................................................................................................................................................ATTGGGCCTG------TGCGTCTGTCTTAGCTG.................2711.00100000010000
.......................................................................................................................................................GGACCTAGTCGCGATCGGACC..................................................................................................................................................................2111.00100100000000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGCGAT........................................................................................................................................................................2311.00101000000000
.............................................................................................AAATCGGAGCTCCTCA------------ATCGCCG-C............................................................................................................................................................................................................2411.00101000000000
................................................................................................................................................................................................................................................................................................GGCCTG------TGCGTCTGTCTTAGCTGG................2411.00101000000000
..........................................................................................................................................................CCTAGTCGCGATCGGACCCTAA--------------------------CTG-------AA-T......................................................................................................................2811.00100000010000
.........................................................................................................................................A---GTCGCAGAGTGGACCTAGTCGC...........................................................................................................................................................................2311.00101000000000
...................................................................................................................................................................................................................................................................GCCGTAATCTTATCGCCTGGC......................................................2111.00100100000000
...............................................................................................................................................CGCAGAGTGGACCTAGTCG............................................................................................................................................................................1911.00100000010000
.......................................................................................................................................................................................................................................................................................................................TAGCTGGCTACCGGGTCCGGT..2111.00100000010000
.........................................................................................................................................................................................................................................................................................CGCATTGGGCCTG------TGCGTCTGT.........................2211.00100000010000
...................................................................................................................................GACGTCA---GTCGCAGAGTGGAC...................................................................................................................................................................................2111.00100000010000
...........................................................................................................................CGCCG-CAGACGTCA---GTCGCAGAGTGG.....................................................................................................................................................................................2611.00100000010000
......................................................................................................................................................................................................................................................................................GCTCGCATTGGGCCTG------TGCGTCTGTCTT......................2811.00100000010000
............................................................................................................................................................................................................G-------AA-TCTACC-GC--T------CATCATGT.............................................................................................2011.00100000010000
.....................................................................................................................................................................................................................A-TCTACC-GC--T------CATCATGTC---GCC......................................................................................2211.00100100000000
..........................................................................................................................................................CCTAGTCGCGATCGGACCC.................................................................................................................................................................1911.00100100000000
................................................................................................................................................GCAGAGTGGACCTAGTCGCGATCG......................................................................................................................................................................2411.00100000010000
...................................................................................................................................................GAGTGGACCTAGTCGCGATCGGAC...................................................................................................................................................................2411.00100000010000
.........................................................................................................................................................................................................................TACC-GC--T------CATCATGTC---GCCA---GT................................................................................2211.00101000000000
.....................................................................................................................................CGTCA---GTCGCAGAGTGGAC...................................................................................................................................................................................1911.00100000010000
.....................................................................................................GCTCCTCA------------ATCGCCG-CAGACGT......................................................................................................................................................................................................2211.00100000010000
.................................................................................................................................................................................................................................................................CCGCCGTAATCTTATCGCCTGGC......................................................2311.00100100000000
....................................................................................................................................................................................................................AA-TCTACC-GC--T------CATCATGTC---GCC......................................................................................2311.00101000000000
.................................................CCA-----------------------CAT-------CGAAACCAAAATCG...........................................................................................................................................................................................................................................2011.00100000010000
.....................................................................................................GCTCCTCA------------ATCGCCG-CAGACGTCA---GTC..............................................................................................................................................................................................2711.00100000010000
........................................................................................AACCAAAATCGGAGCTCCT...................................................................................................................................................................................................................................1911.00100000100000
...............................................................................................................................................CGCAGAGTGGACCTAGTCGCGATC.......................................................................................................................................................................2411.00100100000000
..........................................................................................................................................................................................................................................................................................GCATTGGGCCTG------TGCGTCTGT.........................2111.00100000010000
.......................................................................................................................................................................................................................................................................................CTCGCATTGGGCCTG------TGCGT.............................2011.00101000000000
....................................................................................................................................................................ATCGGACCCTAA--------------------------CTG-------AA-TCTACC-GC--T------.....................................................................................................2611.00110000000000
.....................................................................................................................................................................................................................................................................................................................CTTAGCTGGCTACCGGGTCC.....2011.00101000000000
......................................................................................................................................................TGGACCTAGTCGCGATCGGACCCTAA--------------------------CT..................................................................................................................................2811.00100000010000
..........................................................................................................................................................................................................................................ATCATGTC---GCCA---GTCATCCGCCGTAAT...................................................................2711.00100000010000
.........................................................................................................................................................................................................................................CATCATGTC---GCCA---GTCATCCGCCG.......................................................................2411.00100010000000
...................................................................................................................................................................................................................................................................GCCGTAATCTTATCGCCTG........................................................1911.00110000000000
...................................................................................................................................................................GATCGGACCCTAA--------------------------CTG-------AA-TC.....................................................................................................................2011.00101000000000
droEre2
A-AACC------GCC----AAT-----------CGTTCCAGGTA---------------------------------------------ACCAAAATCGGAGCTCCTCA------------ATCGCCG-CGGACGTCA---GTCGCCAAGTGGACCTAGTCGCGATCGGACCCTAA--------------------------CGG-------AA-ATTACC-GC--T------CATCATGTG---GCCA---GTCATCCGCCCTAATCTTATCACCTGGTTCGCTTTGGGCCTG------TGTGTCTGTCTTAGCTTGGTGCCGGGTCCGGTGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................AGTGGACCTAGTCGCGATCG......................................................................................................................................................................2012.0020010010
..............................................................................................................................................................................................................................................................CATCCGCCCTAATCTTATCACCTG........................................................2412.0020002000
......................................................................................................................................................................................................................................................................................GTTCGCTTTGGGCCTG------TGTGT.............................2112.0020100010
...............................................................................................................................................CGCCAAGTGGACCTAGTCGC...........................................................................................................................................................................2012.0020200000
.........................................................................................................................................................................................................................................CATCATGTG---GCCA---GTCATCC...........................................................................2012.0020101000
......................................................................................................................................................................................................................................................................................GTTCGCTTTGGGCCTG------TGTGTC............................2212.0020000020
.........................................................................................................................................................................................................................................CATCATGTG---GCCA---GTCATC............................................................................1912.0020000020
........................................................................................................................................................................................................................................................................AATCTTATCACCTGGTTC....................................................1811.0010001000
........................................................................................................................................................................................................................TTACC-GC--T------CATCATGTG---GCCA---GTC...............................................................................2411.0010100000
...............................................................................................................................................................................................................................C--T------CATCATGTG---GCCA---GTCATCCGCCC.......................................................................2611.0010100000
.................................................................................................................................................................................................................................................................................ACCTGGTTCGCTTTGGGC...........................................1811.0010100000
..........................................................................................................................................................................................................................................................................................GCTTTGGGCCTG------TGTGTCTGTCTC......................2411.0010100000
................................................................................................................................................................................................................................................................................CACCTGGTTCGCTTTGGGC...........................................1911.0010100000
..........................................................................................................................................................................................................................................ATCATGTG---GCCA---GTCATCC...........................................................................1911.0010000010
......................................................................................................................................................................................................................................................................CTAATCTTATCACCTGGTTCGCTTT...............................................2511.0010100000
................................................................................................................................................................CGCGATCGGACCCTAA--------------------------CGG-------AA-ATTAC..................................................................................................................2611.0010100000
..................................................................................................................................................................................................................................................................................................CCTG------TGTGTCTGTCTTAGCTTGGTGC............2611.0011000000
...............................................................................................................................................................TCGCGATCGGACCCTAA--------------------------CGG-------A.........................................................................................................................2111.0010001000
.............................................................................................................................................................AGTCGCGATCGGACCCTAA--------------------------CGG-------..........................................................................................................................2211.0010100000
...............................................................................................................................................CGCCAAGTGGACCTAGTCGCG..........................................................................................................................................................................2111.0010001000
.......................................................................................................................................................GGACCTAGTCGCGATCGGACCCT................................................................................................................................................................2311.0010000100
..................................................................................................................................................CAAGTGGACCTAGTCGCGATCGGAC...................................................................................................................................................................2511.0010100000
...........................................................................................................................................................................................................................................................................................CTTTGGGCCTG------TGTGTCTGTCTTAGC...................2611.0010001000
......................................................................................................................................................................................................................................................................................GTTCGCTTTGGGCCTG------TGT...............................1911.0010000010
............................................................................................................................................................................CTAA--------------------------CGG-------AA-ATTACC-GC--T------CATCATGT.............................................................................................2611.0010100000
.........................................................................................................................................................................................................................................................................................CGCTTTGGGCCTG------TGTGTCTGTC........................2311.0010001000
............................................................................................................................................................................................................G-------AA-ATTACC-GC--T------CATCATGTG---GCCA---..................................................................................2511.0011000000
.............................................................................................................................................GTCGCCAAGTGGACCTAGTCGCGATC.......................................................................................................................................................................2611.0010000010
.....................................................................................................................................................................................................................A-ATTACC-GC--T------CATCATGTG---GCCA---..................................................................................2311.0010000010
............................................................................................................................................................................................................................................................................TTATCACCTGGTTCGCTTTGGGCCT.........................................2511.0011000000
...........................................................................................................................................................................................................................................................................CTTATCACCTGGTTCGCTTTGGGC...........................................2411.0010100000
.........................................GTA---------------------------------------------ACCAAAATCGGAGCTCCTC..................................................................................................................................................................................................................................2211.0010100000
............................................................................................................................................................................................................................................................................................................TGTGTCTGTCTTAGCTTGGTG.............2111.0010000010
...............................................................................................................................................................................................................................................................ATCCGCCCTAATCTTATCACCTG........................................................2311.0010001000
....................................................................................................................................................AGTGGACCTAGTCGCGATC.......................................................................................................................................................................1911.0010000010
.....................................................................................................................................................................................................................................................................................................................CTTAGCTTGGTGCCGGGTCC.....2011.0010001000
.........................................GTA---------------------------------------------ACCAAAATCGGAGCTCCT...................................................................................................................................................................................................................................2111.0010100000
........................................................................................................................................................................................................................................................A---GTCATCCGCCCTAATCTT................................................................1911.0010001000
.............................................................................................................................................GTCGCCAAGTGGACCTAGTCGC...........................................................................................................................................................................2211.0010000010
.............................................................................................................................................................................................................................................................................................................GTGTCTGTCTTAGCTTGGTGCCGGGT.......2611.0011000000

Generated: 05/18/2015 at 03:37 AM