ID:

dwi_22

 Coordinate:

scf2_1100000004591:180472-180559 -

 Confidence:

candidate

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.4 -13.4 -13.3

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
TV1ILTRGypsy+
mature

  1. dwi_21  scf2_1100000008628:417-434 -
  2. dwi_22  scf2_1100000004591:180539-180556 -
star

Sense Strand Reads

TGGGTATTCCTACTATTGGAATGTAGTTTTCATTATCCTCGTGAGCACTATGTATCCTACCAGCTGCGCCAATTAAATATCCAATTTTCCCAATAAGGAAAAAAAAGATATGTTTTGTGAGTTAAAAGCAACGTACTTTATTATTTGAATGAAAACTTAGAACTGGTTACAAAAATGTCTTATGGTTA

***********************************.....(((((...(((((...((...((((.(((.((....(((((...((((((......))))))....)))))...)))))))))...))..))))).)))))............*********************************** 		Read size # Mismatch Hit Count Total Norm Total V119

head

 M045

female body

 V117

male body		 V118

embryo

 M020

head
.................................................TCGTATCCTACCAGCTGCGCCA..................................................................................................................... 22 2 2 12527.00 25054 11768 8052 3049 1909 276
..................................................CGTATCCTACCAGCTGCGCCA..................................................................................................................... 21 1 2 5084.00 10168 8817 850 185 301 15
................................................TTCGTATCCTACCAGCTGCGCCA..................................................................................................................... 23 2 2 3867.00 7734 7049 309 165 200 11
.....................................................ATCCTACCAGCTGCGCCA..................................................................................................................... 18 0 2 3034.00 6068 4730 280 151 866 41
..................................................CGAATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 8 2418.75 19350 17210 1014 549 566 11
...................................................GAATCCTACCAGCTGCGCCA..................................................................................................................... 20 1 2 2325.00 4650 3872 451 127 196 4
....................................................AATCCTACCAGCTGCGCCA..................................................................................................................... 19 1 4 2299.00 9196 8046 433 393 316 8
...................................................GTATCCTACCAGCTGCGCCA..................................................................................................................... 20 0 2 2140.50 4281 3654 377 44 202 4
....................................................TATCCTACCAGCTGCGCCA..................................................................................................................... 19 0 2 1911.00 3822 3161 393 174 83 11
...............................................GTTCGTATCCTACCAGCTGCGCCA..................................................................................................................... 24 3 5 1450.60 7253 6004 701 370 157 21
.................................................TCGGATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 14 762.57 10676 5377 2939 1247 901 212
....................................................GATCCTACCAGCTGCGCCA..................................................................................................................... 19 1 6 639.00 3834 3360 163 185 112 14
...................................................GGATCCTACCAGCTGCGCCA..................................................................................................................... 20 1 3 626.00 1878 1572 179 17 101 9
....................................................CATCCTACCAGCTGCGCCA..................................................................................................................... 19 1 2 624.50 1249 1104 71 39 30 5
..................................................CGGATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 8 574.50 4596 4036 319 72 150 19
...................................................TCATCCTACCAGCTGCGCCA..................................................................................................................... 20 2 3 344.33 1033 557 277 127 67 5
................................................TTCGGATCCTACCAGCTGCGCCA..................................................................................................................... 23 3 13 267.31 3475 3172 132 69 97 5
...................................................GTATCCTACCAACTGCGCCA..................................................................................................................... 20 1 4 235.75 943 848 58 6 31 0
..................................................CGTATCCTACCAACTGCGCCA..................................................................................................................... 21 2 8 195.63 1565 1365 132 38 30 0
.................................................TCGCATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 7 170.71 1195 555 368 166 94 12
..................................................CGCATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 2 135.00 270 227 30 5 7 1
..................................................TTCATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 3 125.67 377 347 11 13 5 1
...................................................GCATCCTACCAGCTGCGCCA..................................................................................................................... 20 1 2 87.00 174 149 17 3 5 0
................................................TAGGTATCCTACCAGCTGCGCCA..................................................................................................................... 23 1 2 63.50 127 120 0 2 5 0
................................................TTCGCATCCTACCAGCTGCGCCA..................................................................................................................... 23 3 7 53.29 373 346 15 5 7 0
..................................................TCGATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 8 46.25 370 209 72 49 35 5
.................................................AGGTATCCTACCAGCTGCGCCA..................................................................................................................... 22 1 2 44.50 89 80 4 1 4 0
.................................................GTTCATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 4 42.00 168 133 19 15 1 0
.................................................CCGTATCCTACCAGCTGCGCCA..................................................................................................................... 22 2 2 34.00 68 56 5 5 2 0
.................................................TCGTATCCTACAAGCTGCGCCA..................................................................................................................... 22 3 2 32.00 64 39 19 3 3 0
.................................................TCGTATCCTACCAGCTGCGCC...................................................................................................................... 21 2 2 29.50 59 6 50 1 2 0
.................................................TCGTATCCTACCAGCTGAGCCA..................................................................................................................... 22 3 2 29.50 59 53 0 2 4 0
.................................................TCGTATCCTACCAGATGCGCCA..................................................................................................................... 22 3 2 28.50 57 54 2 0 1 0
.................................................TCGTATCATACCAGCTGCGCCA..................................................................................................................... 22 3 2 25.50 51 45 1 0 5 0
.....................................................ATCCTACCAGCTGCGCCG..................................................................................................................... 18 1 2 25.00 50 31 5 8 0 6
................................................CTCGTATCCTACCAGCTGCGCCA..................................................................................................................... 23 3 2 25.00 50 30 19 1 0 0
..................................................TGAATCCTACCAGCTGCGCCA..................................................................................................................... 21 1 2 24.50 49 44 1 2 2 0
.................................................TCGTATCCTACCAGCTGCGCCG..................................................................................................................... 22 3 2 24.50 49 26 9 3 3 8
.................................................TTGAATCCTACCAGCTGCGCCA..................................................................................................................... 22 2 2 23.00 46 36 0 6 3 1
...................................................GTATCCTACCGGCTGCGCCA..................................................................................................................... 20 1 2 23.00 46 16 5 2 23 0
...................................................CTATCCTACCAGCTGCGCCA..................................................................................................................... 20 1 2 22.50 45 34 10 0 1 0
.................................................TAGTATCCTACCAGCTGCGCCA..................................................................................................................... 22 2 2 22.00 44 39 1 0 4 0
................................................TTCGTATCCTACCAGCTGCGCCG..................................................................................................................... 23 3 2 21.00 42 36 6 0 0 0
.................................................TCGTATCCTAACAGCTGCGCCA..................................................................................................................... 22 3 2 21.00 42 39 1 1 1 0
...................................................GTATCCTACCAGCTGCGCCG..................................................................................................................... 20 1 2 20.50 41 34 7 0 0 0
..................................................CGTATCCTACCAGCTGAGCCA..................................................................................................................... 21 2 2 19.00 38 38 0 0 0 0
..................................................CGTATCCTACAAGCTGCGCCA..................................................................................................................... 21 2 2 19.00 38 37 0 0 1 0
................................................TTCGTATCCTACCAGCTGAGCCA..................................................................................................................... 23 3 2 18.50 37 37 0 0 0 0
................................................TTCGTATCCTAACAGCTGCGCCA..................................................................................................................... 23 3 2 18.50 37 36 1 0 0 0
.................................................TCGTATCCTACCGGCTGCGCCA..................................................................................................................... 22 3 20 18.15 363 0 363 0 0 0
...................................................GAATCCTACCAGCTGCGCCG..................................................................................................................... 20 2 2 18.00 36 18 17 0 1 0
.................................................TCGTATCCTACCAGCTTCGCCA..................................................................................................................... 22 3 2 18.00 36 22 9 2 2 1
..................................................CGTATCCTACCAGATGCGCCA..................................................................................................................... 21 2 2 17.00 34 34 0 0 0 0
.................................................TCGTATCCTACGAGCTGCGCCA..................................................................................................................... 22 3 3 16.67 50 1 49 0 0 0
.................................................ACGTATCCTACCAGCTGCGCCA..................................................................................................................... 22 1 2 16.50 33 30 2 0 1 0
.................................................ACGAATCCTACCAGCTGCGCCA..................................................................................................................... 22 2 3 16.33 49 45 2 0 2 0
..................................................CGTATCCTACCAGCTGCGCCG..................................................................................................................... 21 2 2 16.00 32 29 0 3 0 0
.................................................TCGTATCCTACCAGCTGCACCA..................................................................................................................... 22 3 2 16.00 32 30 0 1 1 0
.................................................TCGTATCCTACCAGCTACGCCA..................................................................................................................... 22 3 2 16.00 32 25 2 2 3 0
..................................................TGTATCCTACCAGCTGCGCCA..................................................................................................................... 21 0 2 15.00 30 25 2 3 0 0
................................................TTCGTATCCTACCAGCTGCGCC...................................................................................................................... 22 2 2 14.50 29 16 6 2 5 0
....................................................TATCCTACCAGCTGCGCCG..................................................................................................................... 19 1 2 14.50 29 14 12 3 0 0
...................................................GTATCCTACCAGCTGCGCC...................................................................................................................... 19 0 2 14.50 29 5 6 2 15 1
..................................................CGTATCCTACCAGCTGCGCAA..................................................................................................................... 21 2 3 14.00 42 41 0 0 1 0
.................................................TCGTATCCTACTAGCTGCGCCA..................................................................................................................... 22 3 2 14.00 28 15 7 2 2 2
..................................................CGTATCCTAACAGCTGCGCCA..................................................................................................................... 21 2 2 14.00 28 28 0 0 0 0
................................................TTCGTATCCTACCAGATGCGCCA..................................................................................................................... 23 3 2 14.00 28 26 1 0 1 0
...............................................GTTAGTATCCTACCAGCTGCGCCA..................................................................................................................... 24 3 2 14.00 28 28 0 0 0 0
....................................................AATCCTACCAGCTGCGCCG..................................................................................................................... 19 2 6 13.67 82 50 28 3 1 0
.....................................................ATCCTACAAGCTGCGCCA..................................................................................................................... 18 1 2 13.50 27 27 0 0 0 0
..................................................GGTATCCTACCAGCTGCGCCA..................................................................................................................... 21 1 2 13.50 27 19 7 0 1 0
................................................TTAGTATCCTACCAGCTGCGCCA..................................................................................................................... 23 2 2 13.50 27 26 0 0 1 0
.................................................TCGTACCCTACCAGCTGCGCCA..................................................................................................................... 22 3 2 13.50 27 17 2 4 4 0
................................................TAGGTATCCTACCAACTGCGCCA..................................................................................................................... 23 2 2 13.00 26 24 0 0 2 0
................................................TTCGTATCCTACCAGCTGCACCA..................................................................................................................... 23 3 2 12.50 25 24 0 1 0 0
.................................................TCGTATCCTACCAGCTGCCCCA..................................................................................................................... 22 3 2 12.50 25 18 2 5 0 0
...............................................CTTCGTATCCTACCAGCTGCGCCA..................................................................................................................... 24 2 2 12.50 25 25 0 0 0 0
..................................................CGTATACTACCAGCTGCGCCA..................................................................................................................... 21 2 2 12.50 25 25 0 0 0 0
..................................................TCTATCCTACCAGCTGCGCCA..................................................................................................................... 21 1 2 12.50 25 15 4 2 4 0
................................................ATCGTATCCTACCAGCTGCGCCA..................................................................................................................... 23 3 2 12.50 25 17 7 1 0 0
.....................................................ATCCTACCAGATGCGCCA..................................................................................................................... 18 1 2 12.00 24 22 0 0 2 0
................................................TTCGTATCATACCAGCTGCGCCA..................................................................................................................... 23 3 2 12.00 24 24 0 0 0 0
..................................................CGTATCCTACCAGCTGCGC....................................................................................................................... 19 1 2 11.50 23 20 0 1 2 0
...................................................GTATCCTACAAGCTGCGCCA..................................................................................................................... 20 1 2 11.50 23 23 0 0 0 0
................................................TTCGTATCCTACAAGCTGCGCCA..................................................................................................................... 23 3 2 11.50 23 23 0 0 0 0
.....................................................ATCCTACCAGCTGAGCCA..................................................................................................................... 18 1 2 11.50 23 21 0 0 2 0
..................................................CGTATCCTACCAGCCGCGCCA..................................................................................................................... 21 2 2 11.00 22 19 1 0 2 0
..................................................AGAATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 3 11.00 33 30 3 0 0 0
.................................................GCGTATCCTACCAGCTGCGCCA..................................................................................................................... 22 2 2 11.00 22 19 3 0 0 0
..................................................CGTATCCTACCAGCTGCACCA..................................................................................................................... 21 2 2 10.50 21 21 0 0 0 0
...................................................GTATCCTACCAGCTGCGCAA..................................................................................................................... 20 1 2 10.00 20 20 0 0 0 0
..................................................CGTATCCTACCAGCTGCGCC...................................................................................................................... 20 1 2 10.00 20 12 6 0 2 0
...................................................GAATCCTACAAGCTGCGCCA..................................................................................................................... 20 2 2 10.00 20 20 0 0 0 0
.................................................TTGTATCCTACCAGCTGCGCCA..................................................................................................................... 22 1 2 10.00 20 10 4 4 2 0
...................................................GAATCCTACCAGCTGCGCC...................................................................................................................... 19 1 2 10.00 20 10 6 0 4 0
....................................................AATCCTACAAGCTGCGCCA..................................................................................................................... 19 2 4 10.00 40 40 0 0 0 0
...............................................TTTCGTATCCTACCAGCTGCGCCA..................................................................................................................... 24 3 4 10.00 40 36 2 0 2 0
..................................................AGTATCCTACCAGCTGCGCCA..................................................................................................................... 21 1 2 9.50 19 18 0 0 1 0
.....................................................ATCATACCAGCTGCGCCA..................................................................................................................... 18 1 2 9.50 19 17 0 1 1 0
................................................TTCGTATACTACCAGCTGCGCCA..................................................................................................................... 23 3 2 9.50 19 19 0 0 0 0
...............................................GTTCGTATCCTACCAGCTGCGCC...................................................................................................................... 23 3 7 9.29 65 27 30 2 5 1
.................................................TCGTATCCTACCAGCTCCGCCA..................................................................................................................... 22 3 2 9.00 18 10 4 3 1 0
....................................................TATCCTACCAGATGCGCCA..................................................................................................................... 19 1 2 9.00 18 18 0 0 0 0
...................................................GAATCCTACCAGCTGAGCCA..................................................................................................................... 20 2 2 9.00 18 17 0 1 0 0
..................................................CGTATCCTACCATCTGCGCCA..................................................................................................................... 21 2 2 9.00 18 15 1 1 1 0
.................................................TCGTATCCTACCAGCCGCGCCA..................................................................................................................... 22 3 2 9.00 18 12 2 4 0 0
..................................................CGTATCCTACCAGCTGCCCCA..................................................................................................................... 21 2 2 9.00 18 16 0 0 1 1
..................................................CGTATCCTACCAGCTGCGCCC..................................................................................................................... 21 2 2 9.00 18 18 0 0 0 0
.....................................................ATCCTACCAGCTGCGCCC..................................................................................................................... 18 1 2 9.00 18 17 0 0 1 0
.................................................CCGAATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 13 9.00 117 96 2 12 6 1
...............................................CTTCGAATCCTACCAGCTGCGCCA..................................................................................................................... 24 3 7 8.71 61 55 2 2 2 0
.................................................TTCGATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 12 8.67 104 93 2 4 5 0
..................................................CGAATCCTACAAGCTGCGCCA..................................................................................................................... 21 3 8 8.63 69 66 0 0 3 0
..................................................CATATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 2 8.50 17 16 1 0 0 0
.................................................TCGTGTCCTACCAGCTGCGCCA..................................................................................................................... 22 3 2 8.50 17 9 4 1 3 0
...................................................GTATCCTACCAGCTGCGACA..................................................................................................................... 20 1 2 8.50 17 17 0 0 0 0
.....................................................ACCCTACCAGCTGCGCCA..................................................................................................................... 18 1 2 8.50 17 13 1 0 3 0
..................................................CGTATCCTACCAGCTACGCCA..................................................................................................................... 21 2 2 8.50 17 16 1 0 0 0
.................................................TCGTATCCCACCAGCTGCGCCA..................................................................................................................... 22 3 3 8.33 25 14 4 5 2 0
..................................................CGTATCCTACCGGCTGCGCCA..................................................................................................................... 21 2 8 8.25 66 19 24 3 19 1
................................................TTCGTATCCTACCAGCTGCCCCA..................................................................................................................... 23 3 2 8.00 16 15 0 0 1 0
.................................................TCGTATCCTACCAGTTGCGCCA..................................................................................................................... 22 3 2 8.00 16 16 0 0 0 0
.....................................................ATCCTACCAGCTGCCCCA..................................................................................................................... 18 1 2 8.00 16 15 0 0 1 0
...............................................GTCCGTATCCTACCAGCTGCGCCA..................................................................................................................... 24 3 2 8.00 16 14 2 0 0 0
...................................................GAATCCTACCAGCTGCACCA..................................................................................................................... 20 2 2 7.50 15 14 1 0 0 0
...................................................GAATCATACCAGCTGCGCCA..................................................................................................................... 20 2 2 7.50 15 15 0 0 0 0
...................................................TAATCCTACCAGCTGCGCCA..................................................................................................................... 20 2 6 7.50 45 40 4 0 1 0
.....................................................ATCCCACCAGCTGCGCCA..................................................................................................................... 18 1 2 7.50 15 12 0 2 1 0
....................................................TATCCTACCAGCTGAGCCA..................................................................................................................... 19 1 2 7.50 15 15 0 0 0 0
....................................................TATCCTAACAGCTGCGCCA..................................................................................................................... 19 1 2 7.50 15 15 0 0 0 0
................................................TTCGTATCCTACCAGCTACGCCA..................................................................................................................... 23 3 2 7.50 15 15 0 0 0 0
....................................................AATCCTACCAGATGCGCCA..................................................................................................................... 19 2 5 7.40 37 36 1 0 0 0
....................................................AATCCTACCAGCTGAGCCA..................................................................................................................... 19 2 5 7.20 36 36 0 0 0 0
.....................................................ATCCTACCAGCTGCGCAA..................................................................................................................... 18 1 3 7.00 21 21 0 0 0 0
...................................................GTATCCTACCAGCTGAGCCA..................................................................................................................... 20 1 2 7.00 14 14 0 0 0 0
..................................................CGTATCCTATCAGCTGCGCCA..................................................................................................................... 21 2 2 7.00 14 13 1 0 0 0
.....................................................ATACTACCAGCTGCGCCA..................................................................................................................... 18 1 2 7.00 14 12 0 1 1 0
....................................................TATCCTACAAGCTGCGCCA..................................................................................................................... 19 1 2 7.00 14 14 0 0 0 0
.................................................TCGTATCCTACCAGCTGCGCCC..................................................................................................................... 22 3 4 7.00 28 17 1 8 1 1
................................................TTCGTATCCTACCAGCTCCGCCA..................................................................................................................... 23 3 2 7.00 14 13 0 0 1 0
....................................................TATCCTACCAGCTGCGCC...................................................................................................................... 18 0 2 7.00 14 4 2 2 4 2
....................................................AATCCTAACAGCTGCGCCA..................................................................................................................... 19 2 5 7.00 35 35 0 0 0 0
.................................................TCGTATCCTACCCGCTGCGCCA..................................................................................................................... 22 3 2 7.00 14 11 0 3 0 0
................................................TCCGTATCCTACCAGCTGCGCCA..................................................................................................................... 23 2 2 7.00 14 14 0 0 0 0
.....................................................ATCCTACCAGCTGCACCA..................................................................................................................... 18 1 2 7.00 14 14 0 0 0 0
..................................................CGAATACTACCAGCTGCGCCA..................................................................................................................... 21 3 9 6.89 62 60 0 0 2 0
..................................................CGTATCCTACCAGCTGCGACA..................................................................................................................... 21 2 5 6.80 34 33 0 0 1 0
................................................TTCGTATCCTACCAGCTGCGCCC..................................................................................................................... 23 3 4 6.75 27 27 0 0 0 0
.................................................TCGTATCCTGCCAGCTGCGCCA..................................................................................................................... 22 3 2 6.50 13 8 3 2 0 0
...................................................GTATCATACCAGCTGCGCCA..................................................................................................................... 20 1 2 6.50 13 13 0 0 0 0
................................................TTCGTCTCCTACCAGCTGCGCCA..................................................................................................................... 23 3 2 6.50 13 13 0 0 0 0
................................................TTTGAATCCTACCAGCTGCGCCA..................................................................................................................... 23 2 2 6.50 13 13 0 0 0 0
..................................................TCCATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 2 6.50 13 9 4 0 0 0
..................................................CGTACCCTACCAGCTGCGCCA..................................................................................................................... 21 2 2 6.50 13 12 1 0 0 0
.................................................TCGTATCCTACCAGCAGCGCCA..................................................................................................................... 22 3 2 6.50 13 9 2 0 2 0
................................................TTCGTATCCTACCAGCTTCGCCA..................................................................................................................... 23 3 2 6.50 13 13 0 0 0 0
...................................................GAATACTACCAGCTGCGCCA..................................................................................................................... 20 2 2 6.50 13 12 0 0 1 0
.................................................TTGGATCCTACCAGCTGCGCCA..................................................................................................................... 22 2 2 6.50 13 7 0 1 5 0
..................................................CGAATCCTAACAGCTGCGCCA..................................................................................................................... 21 3 9 6.44 58 58 0 0 0 0
.................................................TCGTATCCTACCAGCTGCTCCA..................................................................................................................... 22 3 5 6.20 31 16 4 6 5 0
...................................................GTATACTACCAGCTGCGCCA..................................................................................................................... 20 1 2 6.00 12 12 0 0 0 0
...............................................ATTCGTATCCTACCAGCTGCGCCA..................................................................................................................... 24 3 2 6.00 12 10 1 1 0 0
.................................................TCGTATCCTACCAGCTGTGCCA..................................................................................................................... 22 3 3 6.00 18 11 2 2 3 0
..................................................CGAATCCTACCAGCTGAGCCA..................................................................................................................... 21 3 12 5.83 70 67 0 2 1 0
.................................................GCGAATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 8 5.75 46 39 5 1 1 0
...................................................GGATCCTACCAGCTGCGCCG..................................................................................................................... 20 2 3 5.67 17 11 4 0 0 2
.................................................TCGTATCCTATCAGCTGCGCCA..................................................................................................................... 22 3 3 5.67 17 16 0 0 1 0
.................................................TAGAATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 17 5.65 96 89 0 2 5 0
.................................................TCGTATCCTACCAGCTGCGC....................................................................................................................... 20 2 7 5.57 39 13 10 10 5 1
...................................................GTATCCTAACAGCTGCGCCA..................................................................................................................... 20 1 2 5.50 11 11 0 0 0 0
...................................................GTATCCTACCACCTGCGCCA..................................................................................................................... 20 1 2 5.50 11 11 0 0 0 0
................................................TTCGTATCCTACCAGTTGCGCCA..................................................................................................................... 23 3 2 5.50 11 10 0 0 1 0
....................................................TATACTACCAGCTGCGCCA..................................................................................................................... 19 1 2 5.50 11 11 0 0 0 0
................................................TTCGTGTCCTACCAGCTGCGCCA..................................................................................................................... 23 3 2 5.50 11 11 0 0 0 0
....................................................TATCATACCAGCTGCGCCA..................................................................................................................... 19 1 2 5.50 11 10 0 0 1 0
.....................................................ATCCTACCAGCTACGCCA..................................................................................................................... 18 1 2 5.50 11 10 0 0 1 0
....................................................AATCCTACCAGCTGCGCC...................................................................................................................... 18 1 4 5.50 22 17 2 2 1 0
.....................................................ATCCTACTAGCTGCGCCA..................................................................................................................... 18 1 2 5.50 11 9 0 0 2 0
................................................TTCGTATCCCACCAGCTGCGCCA..................................................................................................................... 23 3 2 5.50 11 10 0 1 0 0
.....................................................CTCCTACCAGCTGCGCCA..................................................................................................................... 18 1 2 5.50 11 11 0 0 0 0
...................................................TTATCCTACCAGCTGCGCCA..................................................................................................................... 20 1 3 5.33 16 16 0 0 0 0
................................................TTCGTATCCTACCAGCTGCTCCA..................................................................................................................... 23 3 3 5.33 16 16 0 0 0 0
.................................................TCGTATCTTACCAGCTGCGCCA..................................................................................................................... 22 3 3 5.33 16 14 0 0 1 1
..................................................CGAATCCTACCAGCTACGCCA..................................................................................................................... 21 3 9 5.22 47 45 1 1 0 0
..................................................CGAATCCTACCAGCTGCGCCG..................................................................................................................... 21 3 12 5.08 61 57 2 2 0 0
................................................TTCGTATCCTACCAGCTGTGCCA..................................................................................................................... 23 3 2 5.00 10 10 0 0 0 0
..................................................CGTATCCTACCAGCTCCGCCA..................................................................................................................... 21 2 2 5.00 10 10 0 0 0 0
................................................TTCGTATTCTACCAGCTGCGCCA..................................................................................................................... 23 3 2 5.00 10 10 0 0 0 0
.................................................TCGTATCCTCCCAGCTGCGCCA..................................................................................................................... 22 3 2 5.00 10 10 0 0 0 0
....................................................TATCCTACCAGCTGCGCAA..................................................................................................................... 19 1 2 5.00 10 10 0 0 0 0
.................................................TCGTATCCTACCATCTGCGCCA..................................................................................................................... 22 3 5 5.00 25 14 5 1 5 0
.....................................................ATCCTACCAGCTTCGCCA..................................................................................................................... 18 1 2 5.00 10 6 0 0 4 0
.....................................................ATCCTACCAGCTGTGCCA..................................................................................................................... 18 1 2 5.00 10 9 0 0 1 0
..................................................CGTATCCTACCAGCTTCGCCA..................................................................................................................... 21 2 2 5.00 10 10 0 0 0 0
..................................................CGTATCCTACCAGCTGCTCCA..................................................................................................................... 21 2 2 5.00 10 9 0 0 1 0
..................................................CGTATCCCACCAGCTGCGCCA..................................................................................................................... 21 2 2 5.00 10 10 0 0 0 0
...................................................GTATCCTACCAGCTGCGCCC..................................................................................................................... 20 1 2 5.00 10 9 0 0 1 0
..................................................CGTATCCTACCAGCTGCGCTA..................................................................................................................... 21 2 2 5.00 10 9 0 0 1 0
..................................................CGAATCCTACCAGCTGCACCA..................................................................................................................... 21 3 10 4.90 49 49 0 0 0 0
....................................................GATCCTACCAGCTGCGCCG..................................................................................................................... 19 2 7 4.71 33 18 8 6 0 1
...................................................GAATCCTACCAGATGCGCCA..................................................................................................................... 20 2 3 4.67 14 14 0 0 0 0
..................................................CGTATCCTGCCAGCTGCGCCA..................................................................................................................... 21 2 2 4.50 9 8 1 0 0 0
..................................................TGGATCCTACCAGCTGCGCCA..................................................................................................................... 21 1 2 4.50 9 9 0 0 0 0
...................................................GAACCCTACCAGCTGCGCCA..................................................................................................................... 20 2 2 4.50 9 8 0 0 1 0
..................................................CGTATCCTACCCGCTGCGCCA..................................................................................................................... 21 2 2 4.50 9 6 2 0 1 0
.................................................TCGTATACTACCAGCTGCGCCA..................................................................................................................... 22 3 2 4.50 9 3 0 1 5 0
..................................................CGTATCCTACCAGCTGTGCCA..................................................................................................................... 21 2 2 4.50 9 8 0 0 1 0
...................................................GTATCCTACCCGCTGCGCCA..................................................................................................................... 20 1 2 4.50 9 9 0 0 0 0
...................................................GAATCCTAACAGCTGCGCCA..................................................................................................................... 20 2 2 4.50 9 8 0 0 1 0
...................................................GTATCCTACCAGATGCGCCA..................................................................................................................... 20 1 2 4.50 9 8 0 0 1 0
...................................................GAATCCTACCAGCTGCGCCC..................................................................................................................... 20 2 4 4.50 18 18 0 0 0 0
..................................................CGAATCCTACCAGCTGCCCCA..................................................................................................................... 21 3 8 4.38 35 32 1 1 1 0
....................................................AATACTACCAGCTGCGCCA..................................................................................................................... 19 2 6 4.33 26 25 0 0 1 0
.................................................TCGTATCCTACCACCTGCGCCA..................................................................................................................... 22 3 6 4.33 26 14 4 5 2 1
.....................................................ATCCTACCAGCTGCGCTA..................................................................................................................... 18 1 2 4.00 8 8 0 0 0 0
.....................................................ATCCTGCCAGCTGCGCCA..................................................................................................................... 18 1 2 4.00 8 7 1 0 0 0
..................................................CGAATCCTACCAGCTGCGCC...................................................................................................................... 20 2 10 4.00 40 25 5 3 7 0
.....................................................ATCCTACCAGCCGCGCCA..................................................................................................................... 18 1 2 4.00 8 8 0 0 0 0
.....................................................ATCCTACCAGTTGCGCCA..................................................................................................................... 18 1 2 4.00 8 8 0 0 0 0
....................................................AATCATACCAGCTGCGCCA..................................................................................................................... 19 2 5 4.00 20 19 0 0 1 0
..................................................CGTATCCTACCAGCAGCGCCA..................................................................................................................... 21 2 2 4.00 8 7 1 0 0 0
....................................................TATCCTACCAGCTGCGACA..................................................................................................................... 19 1 2 4.00 8 8 0 0 0 0
................................................TTCGTATCCTACTAGCTGCGCCA..................................................................................................................... 23 3 2 4.00 8 8 0 0 0 0
.....................................................ATTCTACCAGCTGCGCCA..................................................................................................................... 18 1 2 4.00 8 8 0 0 0 0
..................................................TCAATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 4 4.00 16 10 1 5 0 0
....................................................TATCCTACCAGCTGCCCCA..................................................................................................................... 19 1 2 4.00 8 7 0 1 0 0
.....................................................TTCCTACCAGCTGCGCCA..................................................................................................................... 18 1 2 4.00 8 7 0 0 1 0
.................................................TCGTCTCCTACCAGCTGCGCCA..................................................................................................................... 22 3 2 4.00 8 7 0 1 0 0
...................................................GAATCCTATCAGCTGCGCCA..................................................................................................................... 20 2 2 4.00 8 6 0 0 2 0
.....................................................ATCCTACCAGCAGCGCCA..................................................................................................................... 18 1 2 4.00 8 8 0 0 0 0
....................................................AATCCTACCAGCTACGCCA..................................................................................................................... 19 2 6 3.83 23 23 0 0 0 0
....................................................AATCCTACCAGCTGTGCCA..................................................................................................................... 19 2 5 3.80 19 17 0 0 2 0
...................................................CCATCCTACCAGCTGCGCCA..................................................................................................................... 20 2 7 3.71 26 12 10 1 2 1
.................................................AGGTATCCTACCAACTGCGCCA..................................................................................................................... 22 2 3 3.67 11 10 0 0 1 0
................................................GTCGTATCCTACCAGCTGCGCCA..................................................................................................................... 23 3 3 3.67 11 6 5 0 0 0
.................................................CCGGATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 8 3.63 29 27 0 2 0 0
....................................................AATCCTACCAGCTGCACCA..................................................................................................................... 19 2 5 3.60 18 17 0 1 0 0
.................................................TCATATCCTACCAGCTGCGCCA..................................................................................................................... 22 3 7 3.57 25 22 1 2 0 0
....................................................AACCCTACCAGCTGCGCCA..................................................................................................................... 19 2 4 3.50 14 13 0 0 1 0
....................................................AATCCTACCAGCTGCCCCA..................................................................................................................... 19 2 4 3.50 14 12 0 0 2 0
....................................................CATCCTACCAGCTGCGCCG..................................................................................................................... 19 2 2 3.50 7 6 1 0 0 0
...................................................GTATCCTACCAGCTCCGCCA..................................................................................................................... 20 1 2 3.50 7 7 0 0 0 0
.....................................................ATCCTACCAGCTGCTCCA..................................................................................................................... 18 1 2 3.50 7 5 0 0 2 0
................................................TTTGTATCCTACCAGCTGCGCCA..................................................................................................................... 23 1 2 3.50 7 7 0 0 0 0
..................................................CGTATCCTACTAGCTGCGCCA..................................................................................................................... 21 2 2 3.50 7 6 0 1 0 0
...................................................ACATCCTACCAGCTGCGCCA..................................................................................................................... 20 2 2 3.50 7 3 4 0 0 0
..................................................CGTATTCTACCAGCTGCGCCA..................................................................................................................... 21 2 2 3.50 7 6 1 0 0 0
....................................................AATCCTATCAGCTGCGCCA..................................................................................................................... 19 2 6 3.50 21 21 0 0 0 0
...................................................GTATCCTACCAGCTTCGCCA..................................................................................................................... 20 1 2 3.50 7 4 2 0 1 0
...................................................GAATCCTACCAGCTACGCCA..................................................................................................................... 20 2 2 3.50 7 7 0 0 0 0
................................................TTCGTATCCTGCCAGCTGCGCCA..................................................................................................................... 23 3 2 3.50 7 7 0 0 0 0
..................................................CGTATCCTACCACCTGCGCCA..................................................................................................................... 21 2 3 3.33 10 10 0 0 0 0
...................................................GGATCCTACCAGCTGCGCC...................................................................................................................... 19 1 3 3.33 10 3 1 0 6 0
....................................................GATCCTACAAGCTGCGCCA..................................................................................................................... 19 2 6 3.00 18 18 0 0 0 0
....................................................GATCCTACCAGCTGCGCAA..................................................................................................................... 19 2 8 3.00 24 22 0 0 2 0
...................................................GAATTCTACCAGCTGCGCCA..................................................................................................................... 20 2 2 3.00 6 6 0 0 0 0
.................................................TCGTATCCTACCAGCTGGGCCA..................................................................................................................... 22 3 2 3.00 6 4 1 0 0 1
..................................................CGAATCCTACCAGCCGCGCCA..................................................................................................................... 21 3 8 3.00 24 24 0 0 0 0
.....................................................GTCCTACCAGCTGCGCCA..................................................................................................................... 18 1 2 3.00 6 5 0 0 1 0
....................................................TATCCTACCAGCTTCGCCA..................................................................................................................... 19 1 2 3.00 6 6 0 0 0 0
.................................................TTCTATCCTACCAGCTGCGCCA..................................................................................................................... 22 2 3 3.00 9 8 1 0 0 0
..................................................CGTATCCTCCCAGCTGCGCCA..................................................................................................................... 21 2 2 3.00 6 6 0 0 0 0
...................................................GGATCCTAACAGCTGCGCCA..................................................................................................................... 20 2 3 3.00 9 9 0 0 0 0
.................................................TCGTATCCTACCAGCTGCGTCA..................................................................................................................... 22 3 5 3.00 15 9 4 1 1 0
....................................................TATCCTACCAGCTGCACCA..................................................................................................................... 19 1 2 3.00 6 6 0 0 0 0
..................................................CGTATCCTACCAGCTGCGTCA..................................................................................................................... 21 2 2 3.00 6 5 0 0 1 0
....................................................GATCCTACCAGATGCGCCA..................................................................................................................... 19 2 7 3.00 21 21 0 0 0 0
....................................................AATCCTACCAGCTTCGCCA..................................................................................................................... 19 2 5 3.00 15 13 1 1 0 0
..................................................CGTGTCCTACCAGCTGCGCCA..................................................................................................................... 21 2 2 3.00 6 6 0 0 0 0
...................................................GAATCCTACCAGCTCCGCCA..................................................................................................................... 20 2 2 3.00 6 6 0 0 0 0
.....................................................ATCCTACCAGCTGCGACA..................................................................................................................... 18 1 5 3.00 15 13 0 0 2 0
....................................................TATCCTACCAGCTGTGCCA..................................................................................................................... 19 1 2 3.00 6 6 0 0 0 0
..................................................CGTATCCTACCAGTTGCGCCA..................................................................................................................... 21 2 2 3.00 6 5 1 0 0 0
....................................................TATCCCACCAGCTGCGCCA..................................................................................................................... 19 1 2 3.00 6 6 0 0 0 0
....................................................CATCCTACCAGCTGCACCA..................................................................................................................... 19 2 2 3.00 6 5 0 0 1 0
....................................................TACCCTACCAGCTGCGCCA..................................................................................................................... 19 1 2 3.00 6 5 0 0 1 0
...................................................GAATCTTACCAGCTGCGCCA..................................................................................................................... 20 2 2 3.00 6 5 0 0 1 0
.....................................................ATCCTATCAGCTGCGCCA..................................................................................................................... 18 1 2 3.00 6 6 0 0 0 0
...................................................GAATCCTACCAGCTGCTCCA..................................................................................................................... 20 2 2 3.00 6 5 0 1 0 0
..................................................CGAATCCTACCAGCTGCTCCA..................................................................................................................... 21 3 9 2.89 26 24 0 0 2 0
....................................................AATCCCACCAGCTGCGCCA..................................................................................................................... 19 2 5 2.80 14 12 1 0 1 0
..................................................CGGATCCTAACAGCTGCGCCA..................................................................................................................... 21 3 9 2.78 25 25 0 0 0 0
..................................................CTTATCCTACCAGCTGCGCCA..................................................................................................................... 21 2 3 2.67 8 7 0 0 1 0
................................................TTCATATCCTACCAGCTGCGCCA..................................................................................................................... 23 3 6 2.67 16 15 0 1 0 0
....................................................AATCCTACCAGCAGCGCCA..................................................................................................................... 19 2 5 2.60 13 13 0 0 0 0
...................................................GAATCCTACCAGCTGCCCCA..................................................................................................................... 20 2 2 2.50 5 5 0 0 0 0
...................................................GAATCCTACCAGCAGCGCCA..................................................................................................................... 20 2 2 2.50 5 5 0 0 0 0
..................................................CGTATCCTACCTGCTGCGCCA..................................................................................................................... 21 2 2 2.50 5 4 1 0 0 0
....................................................AATCCTACCAGCTGCGCCC..................................................................................................................... 19 2 6 2.50 15 14 0 1 0 0
...................................................ATATCCTACCAGCTGCGCCA..................................................................................................................... 20 1 2 2.50 5 4 0 0 1 0
...................................................GTATCCTATCAGCTGCGCCA..................................................................................................................... 20 1 2 2.50 5 5 0 0 0 0
................................................TTAGGATCCTACCAGCTGCGCCA..................................................................................................................... 23 3 6 2.50 15 15 0 0 0 0
....................................................TATCCTACCAGCCGCGCCA..................................................................................................................... 19 1 2 2.50 5 5 0 0 0 0
.................................................TCGTAACCTACCAGCTGCGCCA..................................................................................................................... 22 3 2 2.50 5 5 0 0 0 0
................................................TTCGTATCCTCCCAGCTGCGCCA..................................................................................................................... 23 3 2 2.50 5 5 0 0 0 0
.....................................................ATGCTACCAGCTGCGCCA..................................................................................................................... 18 1 2 2.50 5 4 0 0 1 0
...................................................GTATCCTACTAGCTGCGCCA..................................................................................................................... 20 1 2 2.50 5 5 0 0 0 0
..................................................CGTATCCTTCCAGCTGCGCCA..................................................................................................................... 21 2 2 2.50 5 5 0 0 0 0
...................................................GTAACCTACCAGCTGCGCCA..................................................................................................................... 20 1 2 2.50 5 5 0 0 0 0
....................................................TATCCTACCAGCTGCGTCA..................................................................................................................... 19 1 2 2.50 5 5 0 0 0 0
.....................................................ATCCTCCCAGCTGCGCCA..................................................................................................................... 18 1 2 2.50 5 5 0 0 0 0

Anti-sense strand reads

ACCCATAAGGATGATAACCTTACATCAAAAGTAATAGGAGCACTCGTGATACATAGGATGGTCGACGCGGTTAATTTATAGGTTAAAAGGGTTATTCCTTTTTTTTCTATACAAAACACTCAATTTTCGTTGCATGAAATAATAAACTTACTTTTGAATCTTGACCAATGTTTTTACAGAATACCAAT

***********************************.....(((((...(((((...((...((((.(((.((....(((((...((((((......))))))....)))))...)))))))))...))..))))).)))))............*********************************** 		Read size # Mismatch Hit Count Total Norm Total M045

female body

 V118

embryo

 V117

male body
..CCATAACGTTGATAACCTTA...................................................................................................................................................................... 20 2 9 0.11 1 0 1 0
...CATAACGTTGATAACCTTA...................................................................................................................................................................... 19 2 18 0.06 1 1 0 0
........................................................................................................................................................TTTGAATCTTGACCAATGTTTTTAC........... 25 0 20 0.05 1 1 0 0
.....................................................................................................................................................ACTTTTGAATCTTGACCAATGTTTTT............. 26 0 20 0.05 1 1 0 0
.......................................................................TAATTTATAGGTTAAAAGGGTTAT............................................................................................. 24 0 20 0.05 1 0 1 0
..........................................................TGGTCAACGCGGTTAGTAT............................................................................................................... 19 3 20 0.05 1 1 0 0
...................................................CATAGGATGGTCGCGGAG....................................................................................................................... 18 3 20 0.05 1 1 0 0
...............................................................................................................................CGTTGCATGAAATAATAAA.......................................... 19 0 20 0.05 1 0 0 1
...............................................................................................................................................AAACTTACTTTTGAATCTTGACCA..................... 24 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droWil2 scf2_1100000004591:180422-180609 - dwi_22 candidate TGGGTATTCCTACTATTGGAATGT--AGTTTTCATTATCCTCGTGAGCACTATGT--------------------------AT------------------CCTACCAGCTGCGCCAATTAAATATCCAATTTTCCCAATAAGGAAAAAAAAGATATGTTTTGTG--------------------------------------------------------------------AGTTAAAAGCAAC----------------------------------------------------------------------------------------------------------GTACT-----TT----------------ATTA-----------------TTTGA-AT--------------------GAAAA-------CT----------------------------TAGAACTGGTTACAAAAATGTCT--TATG----------GTTA
droVir3 scaffold_175:1515-1651 + TAGGTCTTTCTGTGATAGGAATAT--GGTTTTCATTGTCTTCCTGTTCACTGTGTATGGTTGCGG--CTATGTAATCTGAA---------------------------GTTTCGCCTAATAAATTTTACT---------------------------------CTATTTCAATACGTGAAAAAACGTCTGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TATG----------ATTT
droMoj3 scaffold_6320:73419-73600 + ATTAGAATGA-------------T--GATCTTAATTATTCACCAAACCA--------------------------------AT------------------CCTACCGGCTGCGCCAATAATAAGACCGATGTTATTGTTGAAATAAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------AT--TTATTCTTAA--TA---------ACTTATAACAGAGTACAAGCGGTCT-TAGA-----------------------------------GCTGA-ATTA---------------------------AAACTGAGCTGCTGATTGATAATTTGTTTG---------------------TC--TTATATA----------GCTA
droGri2 scaffold_7624:3467-3561 + T--------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCAATTGAAAGTCGGACA--ACGGTTCAGAAAAAAAAATATA-------------------------------------------------------------------------------------------------------------------------------------------------------------AT------------T---TTAT----------------TGAAA----------------------------------------------------------------------------------ACA-CGACT-------------------------------TCTTACTTTTGA-------GTA----------CAAA
dp5 Unknown_group_344:10649-10745 - ---------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAGTTAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCACATTG-----------------------------------------ATT----------AGTT
droPer2 scaffold_86:183589-183709 - -----------------------------------------------------------------------------------------------------CCTACCGGCTGCGCCAGTTAAATATGCGACACTGCAGTTTGCG------------------------------------------------------------------------------------------------------------------------TTTA---------------------------------AAAAAAGGTT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCACATTGATTAGTTATTTCCCCGACGATGAC-------------T--TATG----------TCTA
droAna3 scaffold_13010:88089-88227 + TGT------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGGCAATTATATGTTTTAATTCCCGATTTAAAATAAAAAAAATAAAAATTATG----------------------------------------------------------------------------------------------------------------------------------------------A-----TT------------T-----------------------------------------------------TTATTTTATAAATTTTATTA----------------------------TTAAA-------CT---------------------------CAAGAATGAGTTATAAAGATATCC--TATT---GGATTGATCGT
droBip1 scf7180000394721:9482-9598 - AAGGTTTTTCCGTTATTTGTATAT--AATTCTGATTGAC-----------------------------------------------------AGAGCATCAGCTACCAGGTTTTCCATTTAATAGTGAAATAAT----------------AGTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAGTGA---------AGTC--------------AAACTCGTTTA------------------------------------------------TTT----------TATT
droKik1 scf7180000302586:164119-164263 - TTACAAATTTAAA--------AAC--AGCTTTTTGTGTGACTCTAGGAACTA------------AATCTAGTTTTTAAAATAT------------------CTCATTT-------------------------ATCATAAAAGTTAAATAAATATTTGTTTTGCAATTT--------------------------------------------------------------------TTAAATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATTTCTCCATCTAGAAT---------TT--TGAAATA----------ATTA
droFic1 scf7180000451752:37951-38136 + TGT------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAGTAAAATTGTTTATTATTTAAATCAGTCGATCGAATGT--------------------------------------------------------------------CCTGTCAGTTGACTAAGAACAACGC--------------------------------------------TAAGAAGAA--------------------------------------------------TAAATGAACG-AGGATTTAGGTTTACGTCGTTATTCGATTGATCTTAGCT----------------------------TAAGA-------CT----------------------------AATTTCTTGTTACAAAAATCTT------ACTTATGCTGCCCTG
droEle1 scf7180000489793:1547-1741 - ATGGTCTGTCAGTTATGGAAATAT------CTGGTTATCTTCTTGTGCACTGTGGGCTGTTG--GCTGTATATATTGGTATAT------------------TTTCCTC-------------------------A----ATATCATCTGTAAACATATTTTCTTCTATTTTGGTCCTGGATACTGCGTCAGCTACATAATTTTCTTCTCCTGGTAAATATTTAACCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATAAAATTCGTT--TAAT----------GTTA
droRho1 scf7180000775877:357-542 - ATTCCTTTTTAGGTAGTCACTCGCGAGGATAT-------TACTTGT-----------------------------------AT------------------CCTACCGGCTGCGCCAATTATGTTTTTCGGTTCGG--AATATA------------------------------------------------------------------------------------------------------------------------TTAA---------------------------------AAAAAAGC-G--AT--TTTTAAT---------------------ATATAGCGGAGT-CTTT-A-------------------------------------TTGGT--AAAGTTCTTTCAAGTTAGATCCCCAATCTTAAACTGAT-T--------------------------------TTACAAAA-TGCAT--TATT----------CTTA
droBia1 scf7180000301710:17079-17259 - TGTATAATCTTGTT-TTGAATTGT--AATA-------TT------------------------------------------ATCCTATTAATAAAGCAATG------------------------TTTGTCCTTTAAAAT-------ACAAA-----------------------------------------------------------TTTTATAAC---------------------GCTGT--TTCGATTTGTAATATTTGATTTATACATTACCTAAAATTAACCTTTAAATAAA--AAAAGC-G--AT--------------------------------------------GT-TT-----------------------------------------------GTTCTTTAAATTT--------------AAATTTAATTGT-----------------------------------------------TTA----------TTTA
droTak1 scf7180000415754:547-678 - T--------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCAATAAAATGTTTGCACCATAAGTTTAATAT--------------------------------------------------------------------------------------------AAAACAAC----------------------------------------------------------------T--TT--ATTTAATTTA---------ATTTTAAACTGGTTACAATATTTTTT-A-------------------------------------TTTGG-AAGA---------------------------ACACTGACT-------------------------------GTCTTTAGACAAG--------T----------CTCA
droEug1 scf7180000409852:7667-7844 + TGT------------------------------------------------------------------------------AT------------------CTTACCGACTGCGCCAGTAAAATGTTTATGTTT-------------------------TATTAATTGT--------------------------------------TGAGTCGAATTAATGTCCCGTCAATTGACTTAGGACAACGC--------------------------------------------TTTA--GTA--------------------------------------------------CAAACACACG-GAAGATTAAGTTTACGT-ATTTTTTGATGGATCTCAGCT----------------------------TAAGA-------CT----------------------------AAAAACTGGTTACAAAAATATT------T----------CTTG
dm3 chrUextra:22160695-22160826 - TGG------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCAATTAAATTCTTGCAATATT-TATAAGTGAAAAAAAT--------TATA----------------------------------------------------------------------------------------------------------------------------------------------G-----TT------------T---TTATTTCAC-TAAATGATTACAAAACTTTTT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAATTAGG--------T----------CTCA
droSim2 3l:23652278-23652345 + GAGGTCTTTCTGTTATTGAAATGT--GATTTTGGTTGTCTTCTTGTGCACTATGGACAGTAGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------TGTG
droSec2 scaffold_597:3994-4094 + GT-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAGTAAAATAGTTTTT------------------------------------------------------------------------AATTTGAGTCGAATAAATGATCCGTAATTGAACTAAGATCAACGC--------------------------------------------CGAAATAAA--------------------------------------------------TAAAA-----------------------------------------------------------------------------A---------------------------------------------------------------CTC----------CGAA
droYak3 chr2h:50490-50620 - TGGGTTTTTCTGTAATTTCAATGT--AGGTTTCGTTGCTTTCTGATGAACTGCGTATTGTTGCTG-------------------------------------------------CTGTTGAAATATTTATACC--CGTT-----------------------------------------------------------------------------------------------------------------------------------------------------ACTCGTAGAGTAA--AAGGGT-ATACT------------TGATTCGT----------------TGAAA--------------------------------------------------------------------------------------------------------------------------------------------AGTA----------TGTA
droEre2 scaffold_547:47145-47271 + TGG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAATTACACGTTCATAACATCCGT-ATGTCAAAAAAATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------A--TT------------T---TTATTTGAC-CGAAATATTACAAAGG-TTTT-A-------------------------------------TTTGA--AGA---------------------------AAACCGACC-------------------------------GATTAGAATTAGG--------T----------CTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGGGTATTCCTACTATTGGAATGT--AGTTTTCATTATCCTCGTGAGCACTATGT--------------------------AT------------------CCTACCAGCTGCGCCAATTAAATATCCAATTTTCCCAATAAGGAAAAAAAAGATATGTTTTGTG--------------------------------------------------------------------AGTTAAAAGCAAC----------------------------------------------------------------------------------------------------------GTACT-----TT----------------ATTA-----------------TTTGA-AT--------------------GAAAA-------CT----------------------------TAGAACTGGTTACAAAAATGTCT--TATG----------GTTASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.................................................................................AT------------------CCTACCAGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................1823034.006068412801518664730
.....................................................GT--------------------------AT------------------CCTACCAGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................2022140.5042814377442023654
......................................................T--------------------------AT------------------CCTACCAGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................1921911.00382211393174833161
.................................................................................AT------------------CCTACCAGCTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................18225.0050658031
.....................................................GT--------------------------AT------------------CCTACCAGCTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................20220.5041070034
....................................................TGT--------------------------AT------------------CCTACCAGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................21215.0030023025
......................................................T--------------------------AT------------------CCTACCAGCTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................19214.50290123014
.....................................................GT--------------------------AT------------------CCTACCAGCTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................19214.5029162155
.................................................................................AT------------------CCTACCAGCTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................1829.0018000117
......................................................T--------------------------AT------------------CCTACCAGCTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................1827.001422244
.....................................................GT--------------------------AT------------------CCTACCAGCTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................2025.001000019
droVir3
TAGGTCTTTCTGTGATAGGAATAT--GGTTTTCATTGTCTTCCTGTTCACTGTGTATGGTTGCGG--CTATGTAATCTGAA---------------------------GTTTCGCCTAATAAATTTTACT---------------------------------CTATTTCAATACGTGAAAAAACGTCTGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TATG----------ATTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................TTGCGG--CTATGTAATCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000010000000000000
......................................................TATGGTTGCGG--CTATGTAATCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000001000000000000000
...................AATAT--GGTTTTCATTGTCTTCCTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.8040020000000000000000000000000000000000000000000000000000000000000200000000000000
...................AATAT--GGTTTTCATTGTCTTCCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.4020020000000000000000000000000000000000000000000000000000000000000000000000000000
............TGATAGGAATAT--GGTTTTCATTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010000000010000000000000000000000000000000000000000000000000000000000000000000000
..........TGTGATAGGAATAT--GGTTTTCATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010000000000000000000000000000000100000000000000000000000000000000000000000000000
...................AATAT--GGTTTTCATTGTCTTCCTTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.1710000000000000000000000000000000000000000000000000000000000000000100000000000000
TAGGTCTTTCTGTGATAGGAATAT--GGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.1010000000000000000000000000000000000000000000000000000000000000000100000000000000
droMoj3
ATTAGAATGA-------------T--GATCTTAATTATTCACCAAACCA--------------------------------AT------------------CCTACCGGCTGCGCCAATAATAAGACCGATGTTATTGTTGAAATAAAAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------AT--TTATTCTTAA--TA---------ACTTATAACAGAGTACAAGCGGTCT-TAGA-----------------------------------GCTGA-ATTA---------------------------AAACTGAGCTGCTGATTGATAATTTGTTTG---------------------TC--TTATATA----------GCTASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
................................................A--------------------------------AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................1917216.88368729459217299642754
.................................................................................AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................182033.806765750001010
................................................A--------------------------------AT------------------CCTACCGGCTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................19176.4711004742309
.....................................................................................................................................................................................................................................................................................................................................................TAACAGAGTACAAGCGGTCT-TAGA-----------------------------------GC...............................................................................................................26143.645132000712
................................................A--------------------------------AT------------------CCTACCGGCTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................18171.1820600158
........................................................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------AAACTGAGCTGCTGATTGATAAT.....................................................2621.002100001
.....................................TTCACCAAACCA--------------------------------AT------------------CCTACCGGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................26110.647320020
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................25150.609620010
........................................................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------AAACTGAGCTGCTGATTGATAATT....................................................2720.501100000
.....................................................................................................CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................16200.50100001000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTA---------------------------AAACTGAGCTGCTGATTGATA.......................................................2420.501100000
.....................................................................................................................................................................................................................................................................................................................................................TAACAGAGTACAAGCGGTCT-TAGA-----------------------------------GCT..............................................................................................................27140.507200005
.....................................................................................................................................................................................................................................................................................................................................................TAACAGAGTACAAGCGGTCT-TAGA-----------------------------------G................................................................................................................25140.436500001
..................................................................................T------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................17200.408000800
...............................................CA--------------------------------AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................20160.315200003
..............................................CCA--------------------------------AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................21160.315000122
...................................TATTCACCAAACCA--------------------------------AT------------------CCTACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................25100.303300000
................................................A--------------------------------AT------------------CCTACCGGCTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................19170.295001202
...................................................................................................................................................................................................................................................................................................................................................TATAACAGAGTACAAGCGGTCT-TAGA-----------------------------------GC...............................................................................................................28140.294100003
.....................................................................................................................................................................................................................................................................................................................................................TAACAGAGTACAAGCGGTCT-TAG.....................................................................................................................................................23140.294400000
.....................................TTCACCAAACCA--------------------------------AT------------------CCTACCGGCTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................29110.273100020
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................23150.274200020
...............................TAATTATTCACCAAACCA--------------------------------AT------------------CCTACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................2990.222200000
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGGCTGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................27150.203100020
..................................TTATTCACCAAACCA--------------------------------AT------------------CCTACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................26100.202200000
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGGCTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................28150.203200010
.....................................TTCACCAAACCA--------------------------------AT------------------CCTACCGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................24110.182100010
................................................A--------------------------------AT------------------CCTACCGGCTGCGCCAA............................................................................................................................................................................................................................................................................................................................................................................................................20170.183200001
................................................A--------------------------------AT------------------CCTACCGGCTGCGCCAC............................................................................................................................................................................................................................................................................................................................................................................................................20200.153012000
......................................................................................................................................................................................................................................................................................................................................................AACAGAGTACAAGCGGTCT-TAGA-----------------------------------GC...............................................................................................................25140.142200000
.....................................................................................................................................................................................................................................................................................................................................................TAACAGAGTACAAGCGGTCT-TA......................................................................................................................................................22140.142200000
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................22150.132100010
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................24150.132200000
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................29150.132200000
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGGCTGCG................................................................................................................................................................................................................................................................................................................................................................................................................26150.132200000
................................................A--------------------------------AT------------------CCTACCGGCTGCGCCAT............................................................................................................................................................................................................................................................................................................................................................................................................20170.122001001
................................................A--------------------------------AT------------------CCTACCGGCTGCGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................19190.112100100
..................................TTATTCACCAAACCA--------------------------------AT------------------CCTACCGGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................29100.101100000
.........A-------------T--GATCTTAATTATTCACCAAACCA--------------------------------AT------------------CC...........................................................................................................................................................................................................................................................................................................................................................................................................................29100.101100000
..................................................................................T------------------CCTACCGGCTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................17200.102000200
............................TCTTAATTATTCACCAAACCA--------------------------------AT------------------CCTAC........................................................................................................................................................................................................................................................................................................................................................................................................................28100.101100000
.....................................TTCACCAAACCA--------------------------------AT------------------CCTACCGGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................25110.091100000
.....................................TTCACCAAACCA--------------------------------AT------------------CCTACCGGCC...................................................................................................................................................................................................................................................................................................................................................................................................................24110.091000010
..................................................................................T------------------CCTACCGGCTGCGCCAATAATAAGACC..................................................................................................................................................................................................................................................................................................................................................................................................28120.081100000
.....................................................................................................CCTACCGGCTGCGCCAATAATAAG.....................................................................................................................................................................................................................................................................................................................................................................................................24120.081100000
..................................................................................T------------------CCTACCGGCTGCGCCAATAATAAGAC...................................................................................................................................................................................................................................................................................................................................................................................................27120.081000010
................................................A--------------------------------AT------------------CCTACCGGCTGCGCCAATAATAA......................................................................................................................................................................................................................................................................................................................................................................................................26130.081100000
.......................................................................................................................................................................................................................................................................................................................................................ACAGAGTACAAGCGGTCT-TAGA-----------------------------------.................................................................................................................22140.071100000
.....................................................................................................................................................................................................................................................................................................................................................TAACAGAGTACAAGCGGTCT-TAGA-----------------------------------.................................................................................................................24140.071100000
......................................................................................................................................................................................................................................................................................................................................................AACAGAGTACAAGCGGTCT-TAGA-----------------------------------GCT..............................................................................................................26140.071100000
......................................TCACCAAACCA--------------------------------AT------------------CCTACCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................21150.071000010
..........................................CAAACCA--------------------------------AT------------------CCTACCGGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................21150.071000010
...........................................AAACCA--------------------------------AT------------------CCTACCGGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................19150.071000010
........................................ACCAAACCA--------------------------------AT------------------CCTACCGGCTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................26150.071100000
.......................................CACCAAACCA--------------------------------AT------------------CCTACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................21150.071100000
...............................................CA--------------------------------AT------------------CCTACCGGCTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................20160.061001000
droGri2
T--------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCAATTGAAAGTCGGACA--ACGGTTCAGAAAAAAAAATATA-------------------------------------------------------------------------------------------------------------------------------------------------------------AT------------T---TTAT----------------TGAAA----------------------------------------------------------------------------------ACA-CGACT-------------------------------TCTTACTTTTGA-------GTA----------CAAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.................................................................................AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................182030.3060655254
T--------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................19206.651334885
.................................................................................AT------------------CCTACCGGCTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................18200.40871
T--------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................18200.35761
..............................................................................................................TGCGCCAATTGAAAGTCGGACA--ACGGT.......................................................................................................................................................................................................................................................................................................................................................................................27140.14220
.................................................................................AT------------------CCTACCGGCTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................18200.10202
T--------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................19200.10202
.................................................................................AT------------------CCTACCGGCTGCGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................18200.10211
................................................................................................................CGCCAATTGAAAGTCGGACA--ACGGT.......................................................................................................................................................................................................................................................................................................................................................................................25150.07110
.................................................................................AT------------------CCTACCGGCTGCGCCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
.................................................................................AT------------------CCTACCGGCTGCGCCAG............................................................................................................................................................................................................................................................................................................................................................................................................19200.05110
.................................................................................AT------------------CCTACCGGCTGCGCCAA............................................................................................................................................................................................................................................................................................................................................................................................................19200.05110
.................................................................................AT------------------CCTACCGGCTGCGCCATG...........................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
..................................................................................T------------------CCTACCGGCTGCGCCATG...........................................................................................................................................................................................................................................................................................................................................................................................................19200.05110
..........................................................................................................................................................................................................................................................................................................................T------------T---TTAT----------------TGAAA----------------------------------------------------------------------------------ACA-CGACT-------------------------------TCTTAC..............................25200.05110
..................................................................................T------------------CCTACCGGCTGCGCCAG............................................................................................................................................................................................................................................................................................................................................................................................................18200.05110
.................................................................................AT------------------CCTACCGGCTGCGCCAGCC..........................................................................................................................................................................................................................................................................................................................................................................................................21200.05110
..................................................................................T------------------CCTACCGGCTGCGCCAA............................................................................................................................................................................................................................................................................................................................................................................................................18200.05110
dp5
---------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAGTTAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCACATTG-----------------------------------------ATT----------AGTTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAA................................................................................................................................................................................................................26941.4437303361000002700
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAA...............................................................................................................................................................................................................27817.63141013240000500
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAA.................................................................................................................................................................................................................25911.5610409610000700
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAA................................................................................................................................................................................................................2887.1357039100001700
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAA..................................................................................................................................................................................................................2494.894404400000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAA..............................................................................................................................................................................................................2884.253403130000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAG..............................................................................................................................................................................................................2884.003203020000000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAA..................................................................................................................................................................................................................2684.003202310000800
...........................................................................................................................TATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2483.883102800000300
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAA.................................................................................................................................................................................................................2783.883102510000320
.....................................................................................................................................TGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--.........................................................................................................................................................................................................2592.562301510300400
.......................................................................................................................TAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2862.501501400000100
................................................................................................................................GACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAA................................................................................................................................................................................................................2592.332102100000000
................................................................................................................................GACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAA...............................................................................................................................................................................................................2681.631301300000000
.......................................................................................................................TAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TT........................................................................................................................................................................................................................................................2761.5090720000000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2281.501201100100000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AA...................................................................................................................................................................................................................2581.381101010000000
............................................................................................................................................TACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCT..................................................................................................2591.33120930000000
.......................................................................................................................TAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................................................................................................................2661.3380710000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AA...................................................................................................................................................................................................................2391.111001000000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGA.............................................................................................................................................................................................................2981.0080710000000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAA...............................................................................................................................................................................................................2971.0070600000100
...........................................................................................................................TATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TT........................................................................................................................................................................................................................................................2381.0080620000000
.......................................................................................................................TAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................2560.8350500000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TT........................................................................................................................................................................................................................................................1990.7870700000000
..........................................................................................................................................TTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTC...................................................................................................2690.7870500000200
............................................................................................................................ATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2380.7560600000000
.....................................................................................................................................TGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--T........................................................................................................................................................................................................2690.6760110001300
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTC---------------------------------.....................................................................................................................................................................................................................2380.6350500000000
..............................................................................................................................GCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAA................................................................................................................................................................................................................2790.5650500000000
.....................................................................................................................................TGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGAT............................................................................................................................................................................................................2490.5650300100100
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2090.5650400100000
................................................................................................................................GACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAA.................................................................................................................................................................................................................2490.5650500000000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------.....................................................................................................................................................................................................................2380.5040400000000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TT........................................................................................................................................................................................................................................................2180.5040400000000
........................................................................................................................AAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TT........................................................................................................................................................................................................................................................2660.5030210000000
..........................................................................................................................ATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2580.5040400000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................................................................................................................1890.4440100300000
.................................................................................................................................ACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAA................................................................................................................................................................................................................2490.4440400000000
.......................................................................................................................TAAATATGCGACACTGCAGTT......................................................................................................................................................................................................................................................................................................................................................................................2190.4440400000000
............................................................................................................................................TACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCTT.................................................................................................2690.4440120000100
............................................................................................................................................TACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTC...................................................................................................2490.4440300000100
.....................................................................................................................................TGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TA------------------------------------------------------------------------------------------------.......................................................................................................2790.4440200000200
......................................................................................................................TTAAATATGCGACACTGCAGTT......................................................................................................................................................................................................................................................................................................................................................................................2290.4440200000200
................................................................................................................................GACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAA..................................................................................................................................................................................................................2390.4440400000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCACAT............................................................28160.4470610000000
.........................................................................................................................AATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2670.4330300000000
...................................................................................................................CAGTTAAATATGCGACACTGCAGTT......................................................................................................................................................................................................................................................................................................................................................................................2550.4020200000000
.............................................................................................................................................ACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCT..................................................................................................2490.3330300000000
..............................................................................................................................GCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAA.................................................................................................................................................................................................................2690.3330300000000
........................................................................................................................AAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2760.3320110000000
......................................................................................................................TTAAATATGCGACACTGCAGTTTA....................................................................................................................................................................................................................................................................................................................................................................................2460.3320200000000
.......................................................................................................................TAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TC........................................................................................................................................................................................................................................................2760.3320020000000
.....................................................................................................................................TGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGA.............................................................................................................................................................................................................2390.3330200000100
..........................................................................................................................................TTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCT..................................................................................................2790.3330210000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------A....................................................................................................................................................................................................................2290.3330300000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCACA.............................................................27160.3150500000000
................................................................................................................................GACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAG..............................................................................................................................................................................................................2780.2520200000000
..........................................................................................................................ATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TT........................................................................................................................................................................................................................................................2480.2520020000000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTA.......................................................................................................................................................................................................................................................2280.2520200000000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------A....................................................................................................................................................................................................................2480.2520200000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCAC..............................................................26160.2540400000000
............................................................................................................................................TACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATT....................................................................................................2390.2220200000000
......................................................................................................................................GCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--.........................................................................................................................................................................................................2490.2220200000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTC---------------------------------.....................................................................................................................................................................................................................2190.2220110000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------.....................................................................................................................................................................................................................2190.2220200000000
..........................................................................................................................................TTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATT....................................................................................................2590.2220200000000
..............................................................................................................................GCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TT........................................................................................................................................................................................................................................................2090.2220200000000
.......................................................................................................................................CAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--.........................................................................................................................................................................................................2390.2220110000000
...................................................................................................................CAGTTAAATATGCGACACTGCAG........................................................................................................................................................................................................................................................................................................................................................................................2350.2010100000000
......................................................................................................................................................................................................................................................................................................................T--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGC................................................................26160.1930300000000
......................................................................................................................TTAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................2660.1710100000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-T..................................................................22180.1730300000000
.......................................................................................................................TAAATATGCGACACTGCAGTTTAC...................................................................................................................................................................................................................................................................................................................................................................................2460.1710100000000
........................................................................................................................AAATATGCGACACTGCAGTTTAC...................................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
..............................................................................................................TGCGCCAGTTAAATATGCGACACTC...........................................................................................................................................................................................................................................................................................................................................................................................25120.1720200000000
........................................................................................................................AAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................2460.1710100000000
.......................................................................................................TACCGACTGCGCCAGTTAAATATGC..................................................................................................................................................................................................................................................................................................................................................................................................2560.1710100000000
........................................................................................................................AAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................................................................................................................2560.1710100000000
.......................................................................................................TACCGACTGCGCCAGTTAAATATGCGA................................................................................................................................................................................................................................................................................................................................................................................................2760.1710100000000
.......................................................................................................................TAAATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTG---------------------------------.....................................................................................................................................................................................................................2960.1710100000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-...................................................................21200.1530300000000
......................................................................................................................................................................................................................................................................................................................T--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTT......................................................................21200.1530000000300
.........................................................................................................................AATATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TT........................................................................................................................................................................................................................................................2570.1410100000000
................................................................................................................................GACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGA.............................................................................................................................................................................................................2880.1310100000000
..................................................................................................................................CACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGAT............................................................................................................................................................................................................2780.1310010000000
...........................................................................................................................TATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAA.................................................................................................................................................................................................................2980.1310010000000
...........................................................................................................................TATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------G....................................................................................................................................................................................................................2680.1310100000000
................................................................................................................................GACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAA..............................................................................................................................................................................................................2780.1310100000000
..................................................................................................................................CACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--.........................................................................................................................................................................................................2880.1310100000000
.............................................................................................................................TGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................1980.1310000100000
.................................................................................................................................ACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAG..............................................................................................................................................................................................................2680.1310100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCA---------------CTTAAACTTAG-TGCACA.............................................................25160.1320200000000
............................................................................................................................ATGCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................................................................................................................2180.1310100000000
.................................................................................................................................ACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAA...............................................................................................................................................................................................................2580.1310100000000
......................................................................................................................................................................................................................................................................................................................T--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCAC..............................................................28160.1320200000000
.................................................................................................................................ACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGAAA--.........................................................................................................................................................................................................2980.1310100000000
.........................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGC................................................................25160.1320200000000
..................................................................................................................................CACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAA................................................................................................................................................................................................................2390.1110100000000
...................................................................................................................................ACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGA.............................................................................................................................................................................................................2590.1110100000000
...................................................................................................................CAGTTAAATATGCGACACTG...........................................................................................................................................................................................................................................................................................................................................................................................2090.1110100000000
....................................................................................................................AGTTAAATATGCGACACTGCAGT.......................................................................................................................................................................................................................................................................................................................................................................................2390.1110100000000
...................................................................................................................................ACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--.........................................................................................................................................................................................................2790.1110010000000
...........................................................................................................................................TTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCT..................................................................................................2690.1110100000000
.....................................................................................................................................TGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATA--.........................................................................................................................................................................................................2590.1110100000000
..............................................................................................................................GCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTA---------------------------------.....................................................................................................................................................................................................................2290.1110100000000
........................................................................................................................AAATATGCGACACTGCAG........................................................................................................................................................................................................................................................................................................................................................................................1890.1110100000000
....................................................................................................................................CTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGA.............................................................................................................................................................................................................2490.1110100000000
..........................................................................................................................................TTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------AT.....................................................................................................2490.1110000000100
....................................................................................................................................CTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--.........................................................................................................................................................................................................2690.1110100000000
..............................................................................................................................GCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTT.......................................................................................................................................................................................................................................................2190.1110100000000
..........................................................................................................................................TTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCAAA................................................................................................2990.1110100000000
.......................................................................................................................TAAATATGCGACACTGCAGT.......................................................................................................................................................................................................................................................................................................................................................................................2090.1110100000000
...........................................................................................................................................TTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATT....................................................................................................2490.1110100000000
............................................................................................................................................TACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCC..................................................................................................2590.1110010000000
......................................................................................................................................GCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--T........................................................................................................................................................................................................2590.1110100000000
...............................................................................................................................CGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTA.......................................................................................................................................................................................................................................................2090.1110100000000
..............................................................................................................................GCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAA..................................................................................................................................................................................................................2590.1110100000000
..........................................................................................................................................TTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------AAA....................................................................................................2590.1110100000000
......................................................................................................................................GCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGAT............................................................................................................................................................................................................2390.1110100000000
..........................................................................................................................................TTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------AA.....................................................................................................2490.1110100000000
..............................................................................................................................GCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AA...................................................................................................................................................................................................................2490.1110100000000
..............................................................................................................................GCGACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------.....................................................................................................................................................................................................................2290.1110100000000
................................................................................................................................GACACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTC---------------------------------.....................................................................................................................................................................................................................2090.1110100000000
.........................................................................................................................AATATGCGACACTGCAGTT......................................................................................................................................................................................................................................................................................................................................................................................19100.1010100000000
...................................................................................................................................ACTGCAGTTTACG------------------------------------------------------------------------------------------------------------------------TTTT---------------------------------AAAAA................................................................................................................................................................................................................22100.1010100000000
......................................................................................................................................................................................................................................................................................................................T--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-...................................................................23200.1020000000200
.........................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-...................................................................22200.1020000000200
..................................................................................T------------------CCTACCGACTGCGCCAGTTAA........................................................................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---------------CTTAAACTTAG-TGCACATTG-----------------------------------------AT...............25140.0710010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTTAG-TGCACATTG-----------------------------------------ATT----------AGT.24150.0710100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCA---------------CTTAAACTTAG-TGCACATTG-----------------------------------------.................27150.0710100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTTAG-TGCACATTG-----------------------------------------AT...............20150.0710100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTTAG-TGCACATTG-----------------------------------------ATT----------AGT.25150.0710100000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGC................................................................24160.0610100000000
.....................................................................................................................................................................................................................................................................................................................TT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGC................................................................27160.0610100000000
.........................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCA...............................................................26160.0610100000000
.....................................................................................................................................................................................................................................................................................................................TT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TG.................................................................26160.0610100000000
.........................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCACAT............................................................29160.0610100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTTCA---------------CTTAAACTTAG-TGC................................................................23160.0610100000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCA...............................................................25160.0610100000000
.........................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCAC..............................................................27160.0610100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCA---------------CTTAAACTTAG-TG.................................................................21160.0610100000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCAA..............................................................26160.0610100000000
......................................................................................................................................................................................................................................................................................................................T--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TG.................................................................25160.0610100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTTCA---------------CTTAAACTTAG-TGCACA.............................................................26160.0610100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCA---------------CTTAAACTTAG-TGCACAT............................................................26160.0610100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---------------CTTAAACTTAG-TGCACAT............................................................21160.0610100000000
...........................................................................................................................................................................................................................................................................T---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAAC........................................................................29170.0610010000000
.....................................................................................................................................................................................................................................................................................................................TT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-T..................................................................25170.0610100000000
.........................................................................................................................................................................................................................................................................................................................TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-T..................................................................23180.0610100000000
...................................................................................................................................................................................................................................................................................................................GATT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-...................................................................26180.0610100000000
.........................................................................................................................................................................................................................................................................TTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CC.............................................................................26180.0610010000000
........................................................................................................................................................................................................................................................................TTTT---------------------------------AAAAAAGATT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CT.............................................................................27180.0610100000000
..........................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACT.......................................................................18200.0510100000000
.................................................................................AT------------------CCTACCGACTGCGCCAGTTAAAT......................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
......................................................................................................CTACCGACTGCGCCAGTTAAATAT....................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
droPer2
-----------------------------------------------------------------------------------------------------CCTACCGGCTGCGCCAGTTAAATATGCGACACTGCAGTTTGCG------------------------------------------------------------------------------------------------------------------------TTTA---------------------------------AAAAAAGGTT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACTTAG-TGCACATTGATTAGTTATTTCCCCGACGATGAC-------------T--TATG----------TCTASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTAGTTATTTCCCCGACGATGAC-------------T--..................27201.05210210000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTAGTTATTTCCCCGACGATG....................................24200.70140140000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTTAG-TGCACATTGATTAGTTA..................................................26200.50100100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAG-TGCACATTGATTAGTTATTTCCC............................................26200.306060000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---------------CTTAAACTTAG-TGCACATTGA.........................................................24200.153030000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCA---------------CTTAAACTTAG-TGCACAC............................................................26200.102020000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTATTTCCCCGACGATGAC-------------T--TATG----------....27200.102020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTTATTTCCCCGACGATGAC-------------T--TA................26200.102020000
................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA---------------CTTAAACTTAG-TGCACATTGA.........................................................25200.102020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAG-TGCACATTGATTAGTTATT................................................24200.102200000
.....................................................................................................CCTACCGGCTGCGCCACC...........................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
..................................................................................................................................................................................................................................................................................................................AGGTT--TT------------------------------------------------------------------------------------------------ATTCTTTCA---------------CTTAAACT.......................................................................24200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTAGTTATTTCCCCGACGATGAC-------------A--..................28200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCA---------------CTTAAACTTAG-TGCACAC............................................................25200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACATTGATTAGTTATTTCCCCGAC........................................27200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACTTAG-TGCACATTGATTAGTT...................................................25200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAACTTAG-TGCACATTGATTAGTTATT................................................29200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TTTCA---------------CTTAAACTTAG-TGCACA.............................................................22200.051010000
droAna3
TGT------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGGCAATTATATGTTTTAATTCCCGATTTAAAATAAAAAAAATAAAAATTATG----------------------------------------------------------------------------------------------------------------------------------------------A-----TT------------T-----------------------------------------------------TTATTTTATAAATTTTATTA----------------------------TTAAA-------CT---------------------------CAAGAATGAGTTATAAAGATATCC--TATT---GGATTGATCGTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.GT------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................20220.00400110137
.GT------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGGCC.............................................................................................................................................................................................................................................................................................................................................................................................................2020.501000001
...............................................................................................................................TTAATTCCCGATTTAAAATAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................26200.204040000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTATAAAGATATCC--TATT---GGATT......27200.102000020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAAAGATATCC--TATT---GGATTGATC..27200.051010000
..........................................................................................................................ATGTTTTAATTCCCGATTTAAA..................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTTATAAAGATATCC--TATT---GG.........24200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------------------CAAGAATGAGTTATAAAGATATCC--TAC...............28200.051010000
droBip1
AAGGTTTTTCCGTTATTTGTATAT--AATTCTGATTGAC-----------------------------------------------------AGAGCATCAGCTACCAGGTTTTCCATTTAATAGTGAAATAAT----------------AGTATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAGTGA---------AGTC--------------AAACTCGTTTA------------------------------------------------TTT----------TATTSizeHit CountTotal NormTotal
No Reads
droKik1
TTACAAATTTAAA--------AAC--AGCTTTTTGTGTGACTCTAGGAACTA------------AATCTAGTTTTTAAAATAT------------------CTCATTT-------------------------ATCATAAAAGTTAAATAAATATTTGTTTTGCAATTT--------------------------------------------------------------------TTAAATA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTATTTCTCCATCTAGAAT---------TT--TGAAATA----------ATTASizeHit CountTotal NormTotal
No Reads
droFic1
TGT------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAGTAAAATTGTTTATTATTTAAATCAGTCGATCGAATGT--------------------------------------------------------------------CCTGTCAGTTGACTAAGAACAACGC--------------------------------------------TAAGAAGAA--------------------------------------------------TAAATGAACG-AGGATTTAGGTTTACGTCGTTATTCGATTGATCTTAGCT----------------------------TAAGA-------CT----------------------------AATTTCTTGTTACAAAAATCTT------ACTTATGCTGCCCTGSizeHit CountTotal NormTotal
No Reads
droEle1
ATGGTCTGTCAGTTATGGAAATAT------CTGGTTATCTTCTTGTGCACTGTGGGCTGTTG--GCTGTATATATTGGTATAT------------------TTTCCTC-------------------------A----ATATCATCTGTAAACATATTTTCTTCTATTTTGGTCCTGGATACTGCGTCAGCTACATAATTTTCTTCTCCTGGTAAATATTTAACCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATAAAATTCGTT--TAAT----------GTTASizeHit CountTotal NormTotal
No Reads
droRho1
ATTCCTTTTTAGGTAGTCACTCGCGAGGATAT-------TACTTGT-----------------------------------AT------------------CCTACCGGCTGCGCCAATTATGTTTTTCGGTTCGG--AATATA------------------------------------------------------------------------------------------------------------------------TTAA---------------------------------AAAAAAGC-G--AT--TTTTAAT---------------------ATATAGCGGAGT-CTTT-A-------------------------------------TTGGT--AAAGTTCTTTCAAGTTAGATCCCCAATCTTAAACTGAT-T--------------------------------TTACAAAA-TGCAT--TATT----------CTTASizeHit CountTotal NormTotal
No Reads
droBia1
TGTATAATCTTGTT-TTGAATTGT--AATA-------TT------------------------------------------ATCCTATTAATAAAGCAATG------------------------TTTGTCCTTTAAAAT-------ACAAA-----------------------------------------------------------TTTTATAAC---------------------GCTGT--TTCGATTTGTAATATTTGATTTATACATTACCTAAAATTAACCTTTAAATAAA--AAAAGC-G--AT--------------------------------------------GT-TT-----------------------------------------------GTTCTTTAAATTT--------------AAATTTAATTGT-----------------------------------------------TTA----------TTTASizeHit CountTotal NormTotal
No Reads
droTak1
T--------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCAATAAAATGTTTGCACCATAAGTTTAATAT--------------------------------------------------------------------------------------------AAAACAAC----------------------------------------------------------------T--TT--ATTTAATTTA---------ATTTTAAACTGGTTACAATATTTTTT-A-------------------------------------TTTGG-AAGA---------------------------ACACTGACT-------------------------------GTCTTTAGACAAG--------T----------CTCASizeHit CountTotal NormTotal
No Reads
droEug1
TGT------------------------------------------------------------------------------AT------------------CTTACCGACTGCGCCAGTAAAATGTTTATGTTT-------------------------TATTAATTGT--------------------------------------TGAGTCGAATTAATGTCCCGTCAATTGACTTAGGACAACGC--------------------------------------------TTTA--GTA--------------------------------------------------CAAACACACG-GAAGATTAAGTTTACGT-ATTTTTTGATGGATCTCAGCT----------------------------TAAGA-------CT----------------------------AAAAACTGGTTACAAAAATATT------T----------CTTGSizeHit CountTotal NormTotal
No Reads
dm3
TGG------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCAATTAAATTCTTGCAATATT-TATAAGTGAAAAAAAT--------TATA----------------------------------------------------------------------------------------------------------------------------------------------G-----TT------------T---TTATTTCAC-TAAATGATTACAAAACTTTTT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAATTAGG--------T----------CTCASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.................................................................................AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................1820175.0035000000000000000000000000000000000190000004000006270130000000000000000000000000000000003300000000000004100288000021700000000000000000000000000000000006310000000225000000000000014008000016300000000802800000004612800000000000000016000000000290000000020000000000000480000000000000000000000101000259035500002000000000620000039500000007000040000000000042000000103410000000
.........................................................................................................................................................................................................................................................................................................................................................................T-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGT.................................243137.334120000000000000000000000000000000000010010001001031120000000000000000000000000111357000000000000000000000000000000000000000000000000000000000020000011010400000000000000000000000000000000000000000000000000000200009400000013412311211010000000000000000000000000000000000000000000000000000000000000001020210118000012000000000000001023313900000
.GG------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................2017122.7620870000000000000000000020000000000000212012101201101107110000000000000000000000813300001616230353011220015011061522760010040000000000000000000000001315862856103150940000021172122000200000200000056000661040001016600000517002100772112746111043131000000000615224420541323538321251286123183023423000000000117212453273012202600001110521266917155247182613113341222826241181909626100
........................................................................................................................................................................................................................................................................................................................................................................TT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGT.................................253110.00330000000000000000000000000000000000000100000100010114100000000000000000000000065510000000000000000000000000000000000000000000000000000000000010000000000700000000000000000000000000000000000000000000000000000000000000000096024450110000000000000000000000000000000000000000000000000000000000000000000000037000003000000000000000231217900000
......................................................................................................................................................................................................................................................................................................................................................................TTTT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGT.................................27382.67248000000000000000000000000000000000000000000000000010000000000000000000000000020141221000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000003000000011101724023000000000000000000000000000000000000000000000000000000000000000000000001801000000000000000000001029200002
..G------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................192057.80115600000000000000000000000001200500000000300000000000203100000000000000000000000340111100618021521009500400490150215011030000000000000000000000000191670951008511300100000161716124431101000150901030950120626820020139000000180000001771131222200711010001000001102024101135123640011527632021023700100000003102035570110006010300706421340360819624108422828192335981821830
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAAT...........................26351.33154000000000000000000000000000000000000000000000000000000000000000000000000000019452529000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011050100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100701000
.......................................................................................................................................................................................................................................................................................................................................................................TTT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGT.................................26346.3313900000000000000000000000000000000000000000000000010100000000000000000000000004261000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000001115092204000000000000000000000000000000000000000000000000000000000000000000001102800000000000000000000030216100000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAAT...........................28345.0013500000000000000000000000000000000000000000000000000000000000000000000000000002822202400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000680000000300040500000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001200000
.....................................................................................................................................................................................................................................................................................................................................................................TTTTT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGT.................................28330.0090000000000000000000000000000000000000000000000000000000000000000000000000000071716700000000000000000000000000000000000000000000000000000000001000000000020000000000000000000000000000000000000000000000000000000000000000000202100300000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000002700000
.........................................................................................................................................................................................................................................................................................................................................................................T-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAA............................29328.00840000000000000000000000000000000000000000000000000000000000000000000000000000232414230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................T-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTT................................25322.00660000000000000000000000000000000000000000010000001001000000000000000000000000210100000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000100000000000200000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000104500002
.........................................................................................................................................................................................................................................................................................................................................................................T-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTAC..............................27322.00660000000000000000000000000000000000000000000000000000000000000000000000000000161414130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000600000
.................................................................................AT------------------CCTACCGGCTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................182019.30386000000000000000000000010000000000000040020000000500000000000000000000000000000000300002300001000000020020000000000001040000000000100000000000180031000007000200000000014043000000000000000000000000000000000000400000000400750000000000000000000080000000100260008500005700000003800000000000503000000000100193000000004000000010200000000000030
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAA............................27318.335500000000000000000000000000000000000000000000000000000000000000000000000000006144500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000402000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAAT...........................27316.3349000000000000000000000000000000000000000000000000000000000100000000000000000099450000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000020101060000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000900000
..................................................................................T------------------CCTACCGGCTGCGCCAATTAAATTCT...................................................................................................................................................................................................................................................................................................................................................................................................27514.8074000000000000000000000000000000000000000000000000000000000000000000000000000016201470000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000020600080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTT................................26314.33430000000000000000000000000000000000010000100000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000010000000000000101010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000013100000
.........................................................................................................................................................................................................................................................................................................................................................................T-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAAT...........................30314.004200000000000000000000000000000000000000000000000000000000000000000000000000001412940000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
......................................................................................................................................................................................................................................................................................................................................................................TTTT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TG..................................26313.00390000000000000000000000000000000000000000001000000110000000000000000000000000030100000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000500000200000000000000002111800000
.........................................................................................................................................................................................................................................................................................................................................................................T-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTA...............................26313.00390000000000000000000000000000000000000000000000000000000000000000000000000000023000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000330000002002020300000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000010001300000
..................................................................................T------------------CCTACCGGCTGCGCCAATTAAATTC....................................................................................................................................................................................................................................................................................................................................................................................................26512.0060000000000000000000000000000000000000000000000000000000000000000000000000000016201260000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000020200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TG..................................24312.00360000000000000000000000000000000000000000000000101000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000001200040000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000001011700000
.........................................................................................................................................................................................................................................................................................................................................................................T-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACA.............................28311.0033000000000000000000000000000000000000000000000000000000000000000000000000000088440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000120000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000400000
......................................................................................................................................................................................................................................................................................................................................................................................................................GAAGA---------------------------ACACCGACC-------------------------------TGTTACAATTAGG--------T----------C...2939.0027000000000000000000000000000000000000000000000000000000000000000000000000000079560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTTT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TG..................................2738.33250000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041200000
...........................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGT.................................2338.3325000000000000000000000000000000000000000000000000001000000000000000000000000012020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100010000000000000000000000000000000000000000000000000000000000000000000000070000120000000000000000000600000
...........................................................................................................................................TAAGTGAAAAAAAT--------TATA----------------------------------------------------------------------------------------------------------------------------------------------G-----TT------------T---TTATT..................................................................................................................................................................................2727.5015000000000000000000000000000000000000000000000000000000000000000000000000000052340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................T-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TG..................................2337.3322000000000000000000000000000000000000000000100000001000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000002212400000
.GG------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................20197.2613800000000000000000000001000000000000000010000020010020000000000000000000000000000000000200000010000001000100010000000000000000000000000000005300014101031620000050200500000000000000001200000000000000000000200000000000000001000000000000100001120120106015406010010031011105000000001000000000000000000011000000800000200200000000101000
.................................................................................................................................................................TATA----------------------------------------------------------------------------------------------------------------------------------------------G-----TT------------T---TTATTTCAC-TAAATGAT.....................................................................................................................................................................2537.0021000000000000000000000000000000000000000000000000000000000000000000000000000051130000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000710010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACA.............................2636.6720000000000000000000000000000000000000000000000000000000000000000000000000000020320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000100010000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000300000
.GG------------------------------------------------------------------------------AT------------------CCTACCGGCTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................19175.8810000000000000000000000000000000000000010000000000000000000000000000000000000007244000000020000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000200000000002000100000000000000000005000000010000000000000000006900000000201000000000000000000000000021040060000000100011613000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAATTAGG--------...............3035.6717000000000000000000000000000000000000000000000000000000000000000000000000000073250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAA............................2835.6717000000000000000000000000000000000000000000000000000000000000000000000000000036130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000
.................................................................................AT------------------CCTACCGGCTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................18205.5011000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000010000202000000000000000000000000000000004000000000000000000000100000020000000000000100000000000000000000000000000000424000000000000000000000000000002000000000000000000000000000000000100020600000101000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAA............................2535.3316000000000000000000000000000000000000000000000000000000000000000000000000000052410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................T------------------CCTACCGGCTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................17205.2010400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062003800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004
...........................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAAT...........................2935.0015000000000000000000000000000000000000000000000000000000000000000000000000000052260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................T------------------CCTACCGGCTGCGCCAATTAAAT......................................................................................................................................................................................................................................................................................................................................................................................................2464.83290000000000000000000000000000000000000000000000000000000000000000000000000000107620000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAATT..........................2734.6714000000000000000000000000000000000000000000000000000000000000000000000000000054220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAAT...........................2534.6714000000000000000000000000000000000000000000000000000000000000000000000000000023150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTAC..............................2834.6714000000000000000000000000000000000000000000000000000000000000000000000000000051320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................................................................................................................................................T--------TATA----------------------------------------------------------------------------------------------------------------------------------------------G-----TT------------T---TTATTTCAC-TAAATGAT.....................................................................................................................................................................2624.509000000000000000000000000000000000000000000000000000000000000000000000000000025000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGAAGA---------------------------ACACCGACC-------------------------------TGTTACAA............................2634.3313000000000000000000000000000000000000000000000000000000000000000000000000000010310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
......................................................................................................................................................................................................................................................................................................................................................................................................................GAAGA---------------------------ACACCGACC-------------------------------TGTTACAATTAGG--------...............2734.3313000000000000000000000000000000000000000000000000000000000000000000000000000045030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................TTTT-A-------------------------------------TTTGAGAAGA---------------------------ACACCGACC-------------------------------TGTT................................2834.3313000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000
.......................................................................................................TACCGGCTGCGCCAATTAAATTCTTGCAA..............................................................................................................................................................................................................................................................................................................................................................................................2954.2021000000000000000000000000000000000000000000000000000000000000000000000000000083280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GAAGA---------------------------ACACCGACC-------------------------------TGTTACAATTAGT--------...............2734.0012000000000000000000000000000000000000000000000000000000000000000000000000000012220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000200000
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droSim2
GAGGTCTTTCTGTTATTGAAATGT--GATTTTGGTTGTCTTCTTGTGCACTATGGACAGTAGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------TGTGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..............................TTGGTTGTCTTCTTGTGCACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2248.2533000033000000000000
......TTTCTGTTATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2736.331900020013823000000
..............................TTGGTTGTCTTCTTGTGCACTATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2625.001000000060301000000
..........TGTTATTGAAATGT--GATTTTGGTTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2734.001200030000009000000
........TCTGTTATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2534.001200000010128000000
...................AATGT--GATTTTGGTTGTCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2142.5010000010000000000000
.....................TGT--GATTTTGGTTGTCTTCTTGTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2742.501000000000108010000
.......................................TTCTTGTGCACTATGGACAGTAGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------....2722.50500000000500000000
.............TATTGAAATGT--GATTTTGGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2142.5010000010000000000000
.......TTCTGTTATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2632.33700030000013000000
............................TTTTGGTTGTCTTCTTGTGCACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2442.00800010000313000000
...............................TGGTTGTCTTCTTGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1862.0012000001200000000000
..........TGTTATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2332.00600000000204000000
GAGGTCTTTCTGTTATTGAAATGT--GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2632.00600000020211000000
.............TATTGAAATGT--GATTTTGGTTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2442.00800000000008000000
.....................TGT--GATTTTGGTTGTCTTCTTGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2641.50600010000311000000
...........................................TGTGCACTATGGACAGTAGCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------TGT.2621.00200000000000020000
GAGGTCTTTCTGTTATTGAAATGT--G.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.75300000001200000000
..........................GATTTTGGTTGTCTTCTTGTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.75300300000000000000
.............TATTGAAATGT--GATTTTGGTTGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.75300010001001000000
..........TGTTATTGAAATGT--GATTTTGGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.67200010000001000000
.........CTGTTATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.67200000000002000000
.............TATTGAAATGT--GATTTTGGTTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.50200000000101000000
.............TATTGAAATGT--GATTTTGGTTGTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.50200000000101000000
...............TTGAAATGT--GATTTTGGTTGTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.50200000000001001000
................TGAAATGT--GATTTTGGTTGTCTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.50200000000002000000
..GGTCTTTCTGTTATTGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.50300000000003000000
...............................TGGTTGTCTTCTTGTGCACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.50200000000002000000
.............................TTTGGTTGTCTTCTTGTGCACTATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000001000000000
.................GAAATGT--GATTTTGGTTGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.50200000000002000000
....................ATGT--GATTTTGGTTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1740.50200000000002000000
.....................TGT--GATTTTGGTTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.50200000000002000000
..............ATTGAAATGT--GATTTTGGTTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.50200010000001000000
............TTATTGAAATGT--GATTTTGGTTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100100000000000000
...........................ATTTTGGTTGTCTTCTTGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.33200000000002000000
...........GTTATTGAAATGT--GATTTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100010000000000000
...........GTTATTGAAATGT--GATTTTGGTTGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33100010000000000000
.....CTTTCTGTTATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.33100000010000000000
..........TGTTATTGAAATGT--GATTTTGGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100000000100000000
......TTTCTGTTATTGAAATGT--GATTTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100000000000010000
..GGTCTTTCTGTTATTGAAATGT--GAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100000000001000000
............TTATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33100000000001000000
............TTATTGAAATGT--GATTTTGGTTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100000000001000000
....TCTTTCTGTTATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2930.33100000000100000000
..........TGTTATTGAAATGT--GATTTTGGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100000000001000000
.............TATTGAAATGT--GATTTTGGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.25100000000001000000
...............TTGAAATGT--GATTTTGGTTGTCTTCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25100010000000000000
........TCTGTTATTGAAATGT--GATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.25100000010000000000
...............................TGGTTGTCTTCTTGTGCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.25100000000001000000
.......................T--GATTTTGGTTGTCTTCTTGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25100000000010000000
...........GTTATTGAAATGT--GATTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.25100000000001000000
......................GT--GATTTTGGTTGTCTTCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100000000001000000
.............TATTGAAATGT--GATTTTGGTTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100000000001000000
.....................TGT--GATTTTGGTTGTCTTCTTGTGCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25100000000100000000
................TGAAATGT--GATTTTGGTTGTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100000000000001000
.......TTCTGTTATTGAAATGT--GATTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100000000100000000
......................GT--GATTTTGGTTGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1540.25100000000001000000
..............ATTGAAATGT--GATTTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.25100000000001000000
...........................ATTTTGGTTGTCTTCTTGTGCACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25100000000001000000
......TTTCTGTTATTGAAATGT--GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.25100000000010000000
.....................TGT--GATTTTGGTTGTCTTCTTGTGCACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.25100010000000000000
.......................T--GATTTTGGTTGTCTTCTTGTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25100000000000010000
................TGAAATGT--GATTTTGGTTGTCTTCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.25100000000010000000
.....................TGT--GATTTTGGTTGTCTTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100000000001000000
.......................T--GATTTTGGTTGTCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1740.25100000000001000000
.............TATTGAAATGT--GATTTTGGTTGTCTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.25100000000001000000
...............TTGAAATGT--GATTTTGGTTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100100000000000000
....................ATGT--GATTTTGGTTGTCTTCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25100000000000010000
.............................TTTGGTTGTCTTCTTGTGCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.25100000000001000000
...............TTGAAATGT--GATTTTGGTTGTCTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25100010000000000000
...............TTGAAATGT--GATTTTGGTTGTCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25100000000001000000
................TGAAATGT--GATTTTGGTTGTCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.25100100000000000000
........TCTGTTATTGAAATGT--GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.25100000010000000000
.............TATTGAAATGT--GATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1650.20100000000001000000
............................TTTTGGTTGTCTTCTTGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.17100000000000001000
...........................ATTTTGGTTGTCTTCTTGTGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.17100000000001000000
..GGTCTTTCTGTTATTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1760.17100000000100000000
..............................TTGGTTGTCTTCTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1660.17100000000001000000
............................TTTTGGTTGTCTTCTTGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.17100000000001000000
...GTCTTTCTGTTATTGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.14100000000001000000
......TTTCTGTTATTGAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000100000000
droSec2
GT-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAGTAAAATAGTTTTT------------------------------------------------------------------------AATTTGAGTCGAATAAATGATCCGTAATTGAACTAAGATCAACGC--------------------------------------------CGAAATAAA--------------------------------------------------TAAAA-----------------------------------------------------------------------------A---------------------------------------------------------------CTC----------CGAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.T-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................192042.808561080567181
GT-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................202027.4554902790270
GT-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................19200.70140086
.............................................................................................................................................................................................................................................AAGATCAACGC--------------------------------------------CGAAATAAA--------------------------------------------------TAAAA-----------------------------------------------------------------------------A---------------------------------------------------------------CTC----------....29200.2044000
..............................................................................................................................................................................................................TTGAGTCGAATAAATGATCCG...............................................................................................................................................................................................................................................................................................21200.1533000
GT-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................18200.1022000
.T-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAGT...........................................................................................................................................................................................................................................................................................................................................................................................................21200.1022000
.............................................................................................................................................................................................................................................AAGATCAACGC--------------------------------------------CGAAATAAA--------------------------------------------------TAAAA-----------------------------------------------------------------------------A---------------------------------------------------------------C................27200.1022000
............................................................................................................................................................................................................ATTTGAGTCGAATAAATGATCCGTA.............................................................................................................................................................................................................................................................................................25200.1021010
GT-------------------------------------------------------------------------------AT------------------CCTACCGACTGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................18200.0510001
...........................................................................................................................................................................................................AATTTGAGTCGAATAAATGATCCG...............................................................................................................................................................................................................................................................................................24200.0511000
...............................................................................................................................................................................................................................................GATCAACGC--------------------------------------------CGAAATAAA--------------------------------------------------TAAAA-----------------------------------------------------------------------------A---------------------------------------------------------------C................25200.0511000
....................................................................................................................................................................................................................CGAATAAATGATCCGTAATTG.........................................................................................................................................................................................................................................................................................21200.0510100
............................................................................................................................................................................................................ATTTGAGTCGAATAAATGATCCGTAAT...........................................................................................................................................................................................................................................................................................27200.0510010
............................................................................................................................................................................................................ATTTGAGTCGAATAAATGATCCGTAA............................................................................................................................................................................................................................................................................................26200.0511000
.T-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000
...........................................................................................................................TAGTTTTT------------------------------------------------------------------------AATTTGAGTCGAAT.........................................................................................................................................................................................................................................................................................................22200.0511000
.T-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001
.T-------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................19200.0510001
.......................................................................................................TACCGACTGCGCCAGTAAAATAGTT..................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000
.............................................................................................................................................................................................................................................AAGATCAACGC--------------------------------------------CGAAATAAA--------------------------------------------------TAAAA-----------------------------------------------------------------------------.................................................................................25200.0511000
..................................................................................................................................T------------------------------------------------------------------------AATTTGAGTCGAATAAATGATCCGTA.............................................................................................................................................................................................................................................................................................27200.0511000
droYak3
TGGGTTTTTCTGTAATTTCAATGT--AGGTTTCGTTGCTTTCTGATGAACTGCGTATTGTTGCTG-------------------------------------------------CTGTTGAAATATTTATACC--CGTT-----------------------------------------------------------------------------------------------------------------------------------------------------ACTCGTAGAGTAA--AAGGGT-ATACT------------TGATTCGT----------------TGAAA--------------------------------------------------------------------------------------------------------------------------------------------AGTA----------TGTASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................AGGTTTCGTTGCTTTCTGATGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15303000000000
..................................................................................................................................................................................................................................................................................................TCGTAGAGTAA--AAGGGT-ATACT------------T..........................................................................................................................................................................................23200.15301100010000
TGGGTTTTTCTGTAATTTCAATGT--AGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.15300300000000
.................TCAATGT--AGGTTTCGTTGCTTTCTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200200000000
......................GT--AGGTTTCGTTGCTTTCTGATGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000000000
..........................................................................................................................................T-----------------------------------------------------------------------------------------------------------------------------------------------------ACTCGTAGAGTAA--AAGGGT-ATACT------------T..........................................................................................................................................................................................26190.05101000000000
..................................................................................................................................................................................................................................................................................................TCGTAGAGTAA--AAGGGT-ATACT------------TG.........................................................................................................................................................................................24190.05101000000000
........TCTGTAATTTCAATGT--AGGTTTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
....................................................................................................................................................................................................................................................................................................GTAGAGTAA--AAGGGT-ATACT------------T..........................................................................................................................................................................................21200.05101000000000
......................................................TATTGTTGCTG-------------------------------------------------CTGTTGAAATATT...................................................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000
..........................................................................................................................ATATTTATACC--CGTT-----------------------------------------------------------------------------------------------------------------------------------------------------ACTCGTAGA.........................................................................................................................................................................................................................24200.05100100000000
droEre2
TGG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAATTACACGTTCATAACATCCGT-ATGTCAAAAAAATAT-----------------------------------------------------------------------------------------------------------------------------------------------------------A--TT------------T---TTATTTGAC-CGAAATATTACAAAGG-TTTT-A-------------------------------------TTTGA--AGA---------------------------AAACCGACC-------------------------------GATTAGAATTAGG--------T----------CTCASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..G------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................1920121.4524290021065117570
.GG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................202090.2018047430021715100
......................................................................................................CTACCGACTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................152016.35327000000327
.....................................................................................................CCTACCGACTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................162010.05201000000201
.................................................................................AT------------------CCTACCGACTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................18203.9078006200016
TGG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCA.............................................................................................................................................................................................................................................................................................................................................................................................................2152.60134000090
..G------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................18200.50102010250
.GG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................18200.4591000080
..G------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................19200.4592000700
TGG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAATTA.........................................................................................................................................................................................................................................................................................................................................................................................................2550.4021000001
.GG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................20200.2040000040
TGG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAA............................................................................................................................................................................................................................................................................................................................................................................................................2250.2011000000
TGG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................2050.2010000001
TGG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAAT...........................................................................................................................................................................................................................................................................................................................................................................................................2350.2011000000
.GG------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................19200.2041010200
..................................................................................T------------------CCTACCGACTGCGCCAATT..........................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
..G------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAA............................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100
..G------------------------------------------------------------------------------AT------------------CCTACCGACTGCGCCAATTA.........................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000

Generated: 10/20/2015 at 11:24 PM