ID:

dwi_2151

 Coordinate:

scf2_1100000004785:27971-28121 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.5 -21.1 -21.0

Flybase annnotation

exon [dwil_GLEANR_877:1]; CDS [Dwil\GK24635-cds]; intron [Dwil\GK24635-in]

Repeatable elements

NameClassFamilyStrand
TRANSIB3DNACMC-Transib+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGGAATAAGCGGCAGTGAGAGTGACGATGCTTCGTCTAGTACCGAGCCAGGTGATGTCCGACGCAAGGCCCCTAATCGGAAATCTAAGCAGTGTCAGGCAACTGCTGACGTTGATAATGTTACTGGAGTTAACCTTCTCGGCAACAATAGATTTGCACCACTGCACATTGGGCCAGATTTCCCTTTTTTTTGGCATAAAGTAGGAAAATTTTGTAATGCCAAATAAAAAATTTGACTAGATATTTGAAAAG
****************************************************************************.((...(((((((((((....(((((((.((..(((((.((.((((.......)))).)).)))))..)).)))..))))..))))))...))))))).....************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
....................................TAGTACCGAGCCAGGTGATGTCCGA.............................................................................................................................................................................................. 25 0 1 3.00 3 0 3 0 0
.........................................................................................................................................................TGCACCACTGCACATTGGGCCAGATT........................................................................ 26 0 1 3.00 3 3 0 0 0
...............................TCGTCTAGTACCGAGCCAGGTGATG................................................................................................................................................................................................... 25 0 1 3.00 3 2 1 0 0
..............................................CCAGGTGATGTCCGACGCAAGGC...................................................................................................................................................................................... 23 0 1 3.00 3 3 0 0 0
............................................................................CGGAAATCTAAGCAGTGTCAGGC........................................................................................................................................................ 23 0 1 2.00 2 2 0 0 0
.............................................................................................................................................................CCACTGCACATTGGGCCAGATTTCCCT................................................................... 27 0 1 2.00 2 2 0 0 0
.......................................................................CTAATCGGAAATCTAAGCAGTGT............................................................................................................................................................. 23 0 1 2.00 2 2 0 0 0
............................................................................CGGAAATCTAAGCAGTGTCAGGCAA...................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0
.............................................................................................................................................................CCACTGCACATTGGGCCAGATTTC...................................................................... 24 0 1 1.00 1 1 0 0 0
.................................................................................................................ATAATGTTACTGGAGTTAACCTTC.................................................................................................................. 24 0 1 1.00 1 1 0 0 0
................................................................................................................................................................CTGCACATTGGGCCAGATTTCCCT................................................................... 24 0 1 1.00 1 1 0 0 0
...................................................................................................................................................TAGGTTTGCACCACTGCACATTGGGC.............................................................................. 26 1 1 1.00 1 1 0 0 0
...............................................................................................................TGATAATGTTACTGGAGTTAACCT.................................................................................................................... 24 0 1 1.00 1 1 0 0 0
...............................................CAGGTGATGTCCGACGCAAGGCCCC................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
...................................................................................................................................................TAGATTTGCACCACTGCACATTGG................................................................................ 24 0 1 1.00 1 1 0 0 0
.......................................................GTCCGACGCAAGGCCCCTAAA............................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0
...............................................................................................................TGATAATGTTACTGGAGTTAACCTTC.................................................................................................................. 26 0 1 1.00 1 1 0 0 0
.......................................................................CTAATCGGAAATCTAAGCATTGTC............................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0
..GAATAAGCGGCAGTGAGAGTGACGA................................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
.......................................TACCGAGCCAGGTGATGTCCG............................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.............................................................................GGAAATCTAAGCAGTGTCAGGCAAC..................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.GGAATAAGCGGCAGTGAGAGTGA................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
................................................................................AATCTAAGCAGTGTCAGGCAACT.................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
............................................AGCCAGGTGATGTCCGACGCAAG........................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
................................................................................................................GATAATGTTACTGGAGTTAACCTTC.................................................................................................................. 25 0 1 1.00 1 1 0 0 0
...........................................................................TCGGAAATCTAAGCAGTGTCAGGC........................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0
........................................................TCCGACGCAAGGCCCCTAATCGGAAATC....................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
..........................................................................................................GACGTTGATAATGTTACTGGAGTTAA....................................................................................................................... 26 0 1 1.00 1 1 0 0 0
...............................TCGTCTAGTACCGAGCCAGGTGATGTCTT............................................................................................................................................................................................... 29 2 1 1.00 1 1 0 0 0
...................................CTAGTACCGAGCCAGGTGATGTCCGA.............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................TGCACCACTGCACATTGGGCCAGA.......................................................................... 24 0 1 1.00 1 1 0 0 0
...............................TCGTCTAGTACCGAGCCAGGTGA..................................................................................................................................................................................................... 23 0 5 0.80 4 4 0 0 0
...............................TCGTCTAGTACCGAGCCAGGT....................................................................................................................................................................................................... 21 0 5 0.80 4 3 1 0 0
......................................................................................AGCAGTGTCAGGCAACTGCTGACG............................................................................................................................................. 24 0 4 0.75 3 3 0 0 0
..........................................................CGACGCAAGGCCCCTAATCGGA........................................................................................................................................................................... 22 0 3 0.67 2 2 0 0 0
............................GCTTCGTCTAGTACCGAGCCAGG........................................................................................................................................................................................................ 23 0 5 0.60 3 3 0 0 0
.................................................................................................................................................................TGCACATTGGGCCAGATTTCCCTTT................................................................. 25 0 5 0.60 3 2 1 0 0
...........................TGCTTCGTCTAGTACCGAGCCAGG........................................................................................................................................................................................................ 24 0 5 0.60 3 3 0 0 0
............................................................................................................................GGAGTTAACCTTCTCGGCAACAA........................................................................................................ 23 0 2 0.50 1 1 0 0 0
.....................................................................................................................................CTTCTCGGCAACAATAGATTTGCAC............................................................................................. 25 0 2 0.50 1 0 0 1 0
.....................................................................................................................................CTTCTCGGCAACAATAGATTTGCA.............................................................................................. 24 0 2 0.50 1 1 0 0 0
..............................................................................................................................AGTTAACCTTCTCGGCAACAATAGAG................................................................................................... 26 1 2 0.50 1 1 0 0 0
.............................................................................................................................GAGTTAACCTTCTCGGCAACAATAG..................................................................................................... 25 0 2 0.50 1 1 0 0 0
..........................................................................................................................CTGGAGTTAACCTTCTCGGCAACAA........................................................................................................ 25 0 2 0.50 1 1 0 0 0
............................................................................................................................GGAGTTAACCTTCTCGGCAACA......................................................................................................... 22 0 2 0.50 1 1 0 0 0
..........................................................................................................................CTGGAGTTAACCTTCTCGGCAACA......................................................................................................... 24 0 2 0.50 1 1 0 0 0
...............................TCGTCTAGTACCGAGCCAGGTG...................................................................................................................................................................................................... 22 0 5 0.40 2 2 0 0 0
...........................TGCTTCGTCTAGTACCGAGCCAGGTG...................................................................................................................................................................................................... 26 0 5 0.40 2 2 0 0 0
.....................TGACGATGCTTCGTCTAGTACCGAGC............................................................................................................................................................................................................ 26 0 5 0.40 2 2 0 0 0
................................................................................................................................................................................................GCATAAAGTAGGAAAATTTTGTAATG................................. 26 0 5 0.40 2 2 0 0 0
............................GCTTCGTCTAGTACCGAGCCAG......................................................................................................................................................................................................... 22 0 5 0.40 2 2 0 0 0
...............................TCGTCTAGTACCGAGCCAGG........................................................................................................................................................................................................ 20 0 5 0.40 2 2 0 0 0
.............................................................................................TCAGGCAACTGCTGACGTTGA......................................................................................................................................... 21 0 3 0.33 1 0 1 0 0
..........................................................................................GTGTCAGGCAACTGCTGACGTTG.......................................................................................................................................... 23 0 3 0.33 1 1 0 0 0
..............................................................................................................................AGTTAACCTTCTCGGCAACA......................................................................................................... 20 0 3 0.33 1 1 0 0 0
......................................................................................AGCAGTGTCAGGCAACTGCTAACG............................................................................................................................................. 24 1 4 0.25 1 1 0 0 0
...................................................................................CTATCCAGTGTCAGGCAAC..................................................................................................................................................... 19 2 4 0.25 1 1 0 0 0
......................................................................................AGCAGTGTCAGGCAACTGCTGA............................................................................................................................................... 22 0 4 0.25 1 1 0 0 0
...............................TCGTCTAGTACTGAGCCAGGTG...................................................................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0
................................................................................................................................................................................................GCATAAAGTAGGAAAATTTTGTAATGC................................ 27 0 5 0.20 1 1 0 0 0
............................GCTTCGTCTAGTACCGAGCCAGGTGA..................................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0
.............................CTTCGTCTAGTACCGAGCCAGGTGA..................................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0
...........................TGCTTCGTCTAGTACCGAGCCAGGTGAA.................................................................................................................................................................................................... 28 1 5 0.20 1 1 0 0 0
.................................................................................................................................................................TGCACATTGGGCCAGATTTCCCTTTTT............................................................... 27 0 5 0.20 1 1 0 0 0
...........................TGCTTCGTCTAGTACCGAGCCAGGTGA..................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0
....................................................................................................................................................................................................AAAGTAGGAAAATTTTGTAATGCC............................... 24 0 5 0.20 1 0 1 0 0
.................................................................................................................................................................TGCACATTGGGCCAGATTTCCCTTTTTT.............................................................. 28 0 5 0.20 1 0 0 0 1
................................................................................................................................................................................................GCATAAAGTAGGAAAATTTTGTA.................................... 23 0 8 0.13 1 0 0 1 0
..............GTGAGCGTGTCGACGCTTC.......................................................................................................................................................................................................................... 19 3 13 0.08 1 1 0 0 0
....................................................................................................................................CCTTCGCGGGAACAACAGA.................................................................................................... 19 3 18 0.06 1 1 0 0 0

Anti-sense strand reads

TCCTTATTCGCCGTCACTCTCACTGCTACGAAGCAGATCATGGCTCGGTCCACTACAGGCTGCGTTCCGGGGATTAGCCTTTAGATTCGTCACAGTCCGTTGACGACTGCAACTATTACAATGACCTCAATTGGAAGAGCCGTTGTTATCTAAACGTGGTGACGTGTAACCCGGTCTAAAGGGAAAAAAAACCGTATTTCATCCTTTTAAAACATTACGGTTTATTTTTTAAACTGATCTATAAACTTTTC
************************************************************************.((...(((((((((((....(((((((.((..(((((.((.((((.......)))).)).)))))..)).)))..))))..))))))...))))))).....**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
 V119
head
.................................................CCACTACAGGCTGCGTTCCGGGGAT................................................................................................................................................................................. 25 0 1 27.00 27 8 19 0 0 0
.................................................................TCCGGGGATTAGCCTTTAGATTCGT................................................................................................................................................................. 25 0 1 17.00 17 9 8 0 0 0
..........................................................................TAGCCTTTAGATTCGTCACAGTCCGT....................................................................................................................................................... 26 0 1 16.00 16 13 3 0 0 0
...........CGTCACTCTCACTGCTACGAAGCAGAT..................................................................................................................................................................................................................... 27 0 1 15.00 15 14 1 0 0 0
.............................................................GCGTTCCGGGGATTAGCCTTTAGAT..................................................................................................................................................................... 25 0 1 9.00 9 8 1 0 0 0
............................CGAAGCAGATCATGGCTCGGTCCACT..................................................................................................................................................................................................... 26 0 5 8.40 42 13 29 0 0 0
..............CACTCTCACTGCTACGAAGCAGATCAT.................................................................................................................................................................................................................. 27 0 2 8.00 16 16 0 0 0 0
...........................ACGAAGCAGATCATGGCTCGGTCCACT..................................................................................................................................................................................................... 27 0 5 7.40 37 31 6 0 0 0
............................................................................................................GCAACTATTACAATGACCTCAATTGG..................................................................................................................... 26 0 1 7.00 7 7 0 0 0 0
..................................................CACTACAGGCTGCGTTCCGGGGAT................................................................................................................................................................................. 24 0 1 6.00 6 1 4 1 0 0
.........................................................GGCTGCGTTCCGGGGATTAGCCTT.......................................................................................................................................................................... 24 0 3 5.33 16 14 2 0 0 0
.................................................................TCCGGGGATTAGCCTTTAGATTCGTCAC.............................................................................................................................................................. 28 0 1 5.00 5 5 0 0 0 0
.................................................................TCCGGGGATTAGCCTTTAGATTCG.................................................................................................................................................................. 24 0 1 5.00 5 5 0 0 0 0
..............................................................CGTTCCGGGGATTAGCCTTTAGAT..................................................................................................................................................................... 24 0 1 5.00 5 5 0 0 0 0
.....................................................................GGGATTAGCCTTTAGATTCGTCACAGT........................................................................................................................................................... 27 0 1 5.00 5 4 1 0 0 0
............................................................................................................................................CGTTGTTATCTAAACGTGGTGACGTGT.................................................................................... 27 0 1 5.00 5 0 5 0 0 0
.............................GAAGCAGATCATGGCTCGGTCCACT..................................................................................................................................................................................................... 25 0 5 4.20 21 14 7 0 0 0
................................GCAGATCATGGCTCGGTCCACTACAG................................................................................................................................................................................................. 26 0 1 4.00 4 1 3 0 0 0
....................................................................GGGGATTAGCCTTTAGATTCGTCACAGT........................................................................................................................................................... 28 0 1 4.00 4 3 1 0 0 0
...................................................ACTACAGGCTGCGTTCCGGGGAT................................................................................................................................................................................. 23 0 1 4.00 4 0 4 0 0 0
...........................................................................AGCCTTTAGATTCGTCACAGTCCGT....................................................................................................................................................... 25 0 1 4.00 4 3 1 0 0 0
.........................................GGCTCGGTCCACTACAGGCTGCGT.......................................................................................................................................................................................... 24 0 1 4.00 4 4 0 0 0 0
......................................................ACAGGCTGCGTTCCGGGGATTAGCCTT.......................................................................................................................................................................... 27 0 1 4.00 4 4 0 0 0 0
...............................................GTCCACTACAGGCTGCGTTCCGGGGAT................................................................................................................................................................................. 27 0 1 4.00 4 1 3 0 0 0
.........................................................................................................ACTGCAACTATTACAATGACCTCAAT........................................................................................................................ 26 0 1 4.00 4 1 3 0 0 0
...............................................................GTTCCGGGGATTAGCCTTTAGATTCGT................................................................................................................................................................. 27 0 1 4.00 4 4 0 0 0 0
........................................................AGGCTGCGTTCCGGGGATTAGCCTT.......................................................................................................................................................................... 25 0 3 3.67 11 10 1 0 0 0
...............................AGCAGATCATGGCTCGGTCCACTACAG................................................................................................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0
............................................................................................................GCAACTATTACAATGACCTCAATTGGAA................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0
............................................................TGCGTTCCGGGGATTAGCCTTTAGAT..................................................................................................................................................................... 26 0 1 3.00 3 2 1 0 0 0
..........................................................................TAGCCTTTAGATTCGTCACAGTCCG........................................................................................................................................................ 25 0 1 3.00 3 3 0 0 0 0
.......................................................CAGGCTGCGTTCCGGGGATTAGCCTT.......................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0
......................................................................GGATTAGCCTTTAGATTCGTCACAGT........................................................................................................................................................... 26 0 1 3.00 3 2 1 0 0 0
................................................TCCACTACAGGCTGCGTTCCGGGGAT................................................................................................................................................................................. 26 0 1 3.00 3 1 2 0 0 0
.........................................................................................................ACTGCAACTATTACAATGACCTCAATT....................................................................................................................... 27 0 1 3.00 3 1 2 0 0 0
..........................................................................TAGCCTTTAGATTCGTCACAGTCCGTT...................................................................................................................................................... 27 0 1 3.00 3 2 1 0 0 0
......................................................ACAGGCTGCGTTCCGGGGATTAGCCT........................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0
.......................TGCTACGAAGCAGATCATGGCTCGGT.......................................................................................................................................................................................................... 26 0 5 2.60 13 4 9 0 0 0
............GTCACTCTCACTGCTACGAAGCAGAT..................................................................................................................................................................................................................... 26 0 2 2.50 5 4 1 0 0 0
...........................................................................................................TGCAACTATTACAATGACCTCAATTGG..................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
....................................................................................................................TACAATGACCTCAATTGGAAGAGCCGT............................................................................................................ 27 0 1 2.00 2 1 1 0 0 0
.............................................................................................................................................................................................................................TTATTTTTTAAACTGATCTATAAACTTT.. 28 0 1 2.00 2 2 0 0 0 0
...........................................................................AGCCTTTAGATTCGTCACAGTCCGTT...................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
............................................................................GCCTTTAGATTCGTCACAGTCCGT....................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
...........................................................................AGCCTTTAGATTCGTCACAGTCCGTTG..................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
................................................................TTCCGGGGATTAGCCTTTAGATTCGT................................................................................................................................................................. 26 0 1 2.00 2 0 2 0 0 0
.......................................................................GATTAGCCTTTAGATTCGTCACAGT........................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0
....................................................................................................TGACGACTGCAACTATTACAATGACCT............................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0
.........................................................................................................ACTGCAACTATTACAATGACCTCAATTGG..................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0
.........................................GGCTCGGTCCACTACAGGCT.............................................................................................................................................................................................. 20 0 1 2.00 2 1 0 0 1 0
...............................................................GTTCCGGGGATTAGCCTTTAGAT..................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
......................................CATGGCTCGGTCCACTACAGGCTGCGT.......................................................................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0
....................................................................GGGGATTAGCCTTTAGATTCGT................................................................................................................................................................. 22 0 1 2.00 2 1 1 0 0 0
.......................................................................................................CGACTGCAACTATTACAATGACCTCAAT........................................................................................................................ 28 0 1 2.00 2 1 1 0 0 0
............................................................................................................GCAACTATTACAATGACCTCAATTG...................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
.............TCACTCTCACTGCTACGAAGCAGAT..................................................................................................................................................................................................................... 25 0 2 2.00 4 4 0 0 0 0
........................................................................................................GACTGCAACTATTACAATGACCTCAAT........................................................................................................................ 27 0 1 2.00 2 1 1 0 0 0
.......................................ATGGCTCGGTCCACTACAGGCTGCGT.......................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
...................................GATCATGGCTCGGTCCACTACAGGC............................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0
................................................................................................CCGTTGACGACTGCAACTATTACAA.................................................................................................................................. 25 0 3 1.67 5 3 2 0 0 0
..............CACTCTCACTGCTACGAAGCAGAT..................................................................................................................................................................................................................... 24 0 2 1.50 3 3 0 0 0 0
...............................................................................................................................................................................CTAAAGGGAAAAAAAACCGTATTTCAT................................................. 27 0 3 1.33 4 0 4 0 0 0
.........................................................GGCTGCGTTCCGGGGATTAGCCT........................................................................................................................................................................... 23 0 3 1.33 4 4 0 0 0 0
..........................................................GCTGCGTTCCGGGGATTAGCCTT.......................................................................................................................................................................... 23 0 3 1.33 4 3 1 0 0 0
.....................ACTGCTACGAAGCAGATCATGGCTCGGT.......................................................................................................................................................................................................... 28 0 5 1.20 6 6 0 0 0 0
...........................................................................AGCCTTTTGATTCGTCACAGTCCGT....................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................TATCTAAACGTGGTGACGTGTAACC................................................................................ 25 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................TGTTATCTAAACGTGGTGACGTG..................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................CGTGGTGACGTGTAACCCGGTCTA......................................................................... 24 0 1 1.00 1 0 1 0 0 0
....TATTCGCCGTCACTCTCACT................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
.................................CAGATCATGGCTCGGTCCACTACAG................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
......TTCGCCGTCACTCTCACTTCT................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0
.......................................................................................................CGACTGCAACTATTACAATGACCTCAATT....................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
................................................................ATCCGGGGATTAGCCTTTAGATTCGT................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
............................................TCGGTCCACTACAGGCTGCGTT......................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..................CTCACTGCTACGAAGCAGATCATGGCT.............................................................................................................................................................................................................. 27 0 2 1.00 2 2 0 0 0 0
.................................................................................................CGTTGACGACTGCAACTATTACAAT................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
....................................ATCATGGCTCGGTCCACTACAGGC............................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................ACGTGGTGACGTGTAACCCGGT............................................................................ 22 0 1 1.00 1 0 1 0 0 0
..................................................................CCGGGGATTAGCCTTTAGATTCGTCAC.............................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.........................................................................TTAGCCTTTAGATTCGTCACAGTCCGT....................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..................................AGATCATGGCTCGGTCCACTACAGGC............................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................CTGCAACTATTACAATGACCTCAATTGG..................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..................................AGATCATGGCTCGGTCCACTACA.................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
...........................................................................................................TGCAACTATTACAATGACCTCAATTGGAA................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
..............................AAGCAGATCATGGCTCGGTCCACT..................................................................................................................................................................................................... 24 0 5 1.00 5 4 1 0 0 0
.................................................................................................CGTTTACGACTGCAACTATTACAAT................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
.........GCCGTCACTCTCACTGCTACGAA........................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
....TATTCGCCGTCACTCTCACTGC................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................GTTGTTATCTAAACGTGGTGACGTGT.................................................................................... 26 0 1 1.00 1 0 1 0 0 0
......TTCGCCGTCACTCTCACTGCTA............................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................CTGCAACTATTACAATGACCTCAAT........................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
................................................TCCACTACAGGCTGCGTTCCGGGG................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
............................CGAAGCAGATCATGGCTCGGTCCACTAC................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
...........CGTCACTCTCACTGCTACGAAGCAGA...................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
........................................TGGCTCGGTCCACTACAGGCTGCGTT......................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..........................................................TCTGCGTTCCGGGGATTAGCCTTTAGAT..................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
..............................................................................................GTCCGTTGACGACTGCAACTATTACAA.................................................................................................................................. 27 0 3 1.00 3 3 0 0 0 0
..........CCGTCACTCTCACTGCTACGAAGCAGAT..................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................GGTCTAAAGGGAAAAAAAACCGTAT...................................................... 25 0 3 1.00 3 0 3 0 0 0
................................................................................................................................................................GACGTGTAACCCGGTCTAAAGGGAAAA................................................................ 27 0 1 1.00 1 1 0 0 0 0
....TATTCGCCGTCACTCTCACTGCTACGAA........................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..................................................CACTACAGGCTGCGTTCCGGGGATT................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
...................................................................................................................................................ATCTAAACGTGGTGACGTGCAACC................................................................................ 24 1 1 1.00 1 0 1 0 0 0
...............ACTCTCACTGCTACGAAGCAGATCAT.................................................................................................................................................................................................................. 26 0 2 1.00 2 2 0 0 0 0
....................................................................GGGGATTAGCCTTTAGATTCGTCAC.............................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................AATAAACGTGGTGACGTGTAACCCGGT............................................................................ 27 2 1 1.00 1 0 1 0 0 0
...........................ACGAAGCAGATCATGGCTCGGTCCAC...................................................................................................................................................................................................... 26 0 5 1.00 5 5 0 0 0 0
......................................................ACAGGCTGCGTTCCGGGGATTAGC............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
...........................................................TTGCGTTCCGGGGATTAGCCTTTAGAT..................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................GTTATCTAAACGTGGTGACGTGT.................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................GCTGCGTTCCGGGGATTAGCCTTTAGAT..................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.........................................GGCTCGGTCCACTACAGGCTGCGTT......................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................................................GGCTGCGTTCCGGGGATTAGCCTTT......................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................TGTTATCTAAACGTGGTGACGTGT.................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.................................................CCACTACAGGCTGCGCTCCGGGGATCG............................................................................................................................................................................... 27 3 1 1.00 1 1 0 0 0 0
................................................................................................CCGTTGACGACTGCAACTATTACAAT................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.................................................CCACTACAGGCTGCGTTCCAGGGAT................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0
..........................................................................................CACAGTCCGTTGACGACTGCAACTAT....................................................................................................................................... 26 0 3 1.00 3 3 0 0 0 0
...ATATTCGCCGTCACTCTCACT................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0
...................................................................................................................................TGGAAGCGCCCTTGTTGTCTA................................................................................................... 21 3 3 1.00 3 0 0 3 0 0
..........................TACGAAGCAGATCATGGCTCGGTCCACT..................................................................................................................................................................................................... 28 0 5 1.00 5 5 0 0 0 0
..........................................................................................................CTGCAACTATTACAATGACCTCAATTTG..................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0
...........CGTCACTCTCACAGCCACGAAGCAGAT..................................................................................................................................................................................................................... 27 2 1 1.00 1 0 1 0 0 0
......................................................................................................................................................TAAACGTGGTGACGTGTAACCCGGTCT.......................................................................... 27 0 1 1.00 1 0 1 0 0 0
.......................................ATGGCTCGGTCCACTACAGGCTGCGTT......................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.................................................................TCCGGGGATTAGCGTTTAGATTCGT................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
..............................AAGCAGATCATGGCGCGGTCCACTAC................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................ATCTAAACGTGGTGACGTGTAACCC............................................................................... 25 0 1 1.00 1 1 0 0 0 0
.................................................CCACTACAGGCTGCGTTCTGGGGAT................................................................................................................................................................................. 25 1 1 1.00 1 0 1 0 0 0
..........................................................GCTGCGTTCCGGGGATTAGCCTTTAGA...................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.......................................................................TAATAGCCTTTAGATTCGTCACAGTCCGT....................................................................................................................................................... 29 2 1 1.00 1 1 0 0 0 0
...........CGTCACTCTCACTGCGACGAAGCAGAT..................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
..............................................................................................................AACTATTACAATGACCTCAATTGGAA................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................AAACGTGGTGACGTGTAACC................................................................................ 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................CGACTGCAACTATTACAATGACCTC........................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................................TTACAATGACCTCAATTGGAAGAGC............................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
......................................CATGGCTCGGTCCACTACAGGCTGCGTT......................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.............................................................................................................CAACTATTACAATGACCTCAATTGGA.................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.....ATTCGCCGTCACTCTCACTGCTACGAA........................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.................TCTCACTGCTACGAAGCAGATCAT.................................................................................................................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
........................GCTACGAAGCAGATCATGGCTCGGT.......................................................................................................................................................................................................... 25 0 5 0.80 4 4 0 0 0 0
......................................................................................TCGTCACAGTCCGTTGACGACTGCAACT......................................................................................................................................... 28 0 3 0.67 2 2 0 0 0 0
........................................................AGGCTGCGTTCCGGGGATTAGCCT........................................................................................................................................................................... 24 0 3 0.67 2 2 0 0 0 0
............................................................TGCGTTCCGGGGATTAGCCTT.......................................................................................................................................................................... 21 0 3 0.67 2 1 1 0 0 0
............................................................................................................................................................................GGTCTAAAGGGAAAAAAAACCGTA....................................................... 24 0 3 0.67 2 2 0 0 0 0
..................................................................................................................................................................CGTGTAACCCGGTCTAAAGGGAAAA................................................................ 25 0 5 0.60 3 0 3 0 0 0
....................................................................................................................................GGAAGAGCCGTTGTTATCTAAACGT.............................................................................................. 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................GGAAGAGCCGTTGTTATCTAAACGTGGT........................................................................................... 28 0 2 0.50 1 0 1 0 0 0
...............ACTCTCACTGCTACGAAGCAGA...................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
..............CACTCTCACTGCTACGAA........................................................................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0
..............CACTCTCACTGCTACGAAGCAGATC.................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
................................................................................................................................AATTGGAAGAGCCGTTGTTATCT.................................................................................................... 23 0 2 0.50 1 0 1 0 0 0
................CTCTCACTGCTACGAAGCAGATCAT.................................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
.................TCTCACTGCTACGAAGCAGATCATGGC............................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
............GTCACTCTCACTGCTACGAAGC......................................................................................................................................................................................................................... 22 0 2 0.50 1 0 1 0 0 0
..........................TACGAAGCAGATCATGGCTCGGTCCAC...................................................................................................................................................................................................... 27 0 5 0.40 2 2 0 0 0 0
......................CTGCTACGAAGCAGATCATGGCTCGGT.......................................................................................................................................................................................................... 27 0 5 0.40 2 2 0 0 0 0
.........................................................................................................................................................................CCCGGTCTAAAGGGAAAAAAAACCGT........................................................ 26 0 3 0.33 1 0 1 0 0 0
................................................................................................CCGTTGACGACTGCAACTATTAC.................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0
.............................................................................................AGTCCGTTGACGACTGCAACTA........................................................................................................................................ 22 0 3 0.33 1 1 0 0 0 0
...........................................................................................ACAGTCCGTTGACGACTGCAACTA........................................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0
......................................................................................TCGTCACAGTCCGTTGACGACTGCAAC.......................................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0
...........................................................CTGCGTTCCGGGGATTAGCCTT.......................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0
.........................................................GGCTGCGTTCCGGGGATTAGCCTTA......................................................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0
...........................................................................................................................................................................CGGTCTAAAGGGAAAAAAAACCGTAT...................................................... 26 0 3 0.33 1 1 0 0 0 0
.....................................................................................................................................................................................GGAAAAAAAACCGTATTTCATCCTTT............................................ 26 0 3 0.33 1 1 0 0 0 0
......................................................ATAGGCTGCGTTCCGGGGATTAGCCTT.......................................................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0
.............................................................................................AGTCCGTTGACGACTGCAACTATT...................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0
....................................................................................................................................................................................GGGAAAAAAAACCGTATTTCATCCT.............................................. 25 0 3 0.33 1 1 0 0 0 0
...........................................................................................ACAGTCCGTTGACGACTGCAACTAT....................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0
............GTCACTCACACTGCTACGAAGCAGAT..................................................................................................................................................................................................................... 26 1 4 0.25 1 0 1 0 0 0
...................................................ACCACTGGCTGCGTCCCGG..................................................................................................................................................................................... 19 3 5 0.20 1 0 0 0 1 0
.............................GAAGCAGATCATGGCTCGGTCCA....................................................................................................................................................................................................... 23 0 5 0.20 1 0 1 0 0 0
.......................TGCTACGAAGCAGATCATGGCTCGG........................................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0
..........................AACGAAGCAGATCATGGCTCGGTCCAC...................................................................................................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0
............................CGAAGCAGATCATGGCTCGGTCCA....................................................................................................................................................................................................... 24 0 5 0.20 1 0 1 0 0 0
...............................AGCAGATCATGGCTCGGT.......................................................................................................................................................................................................... 18 0 5 0.20 1 1 0 0 0 0
.....................ACTGCTACGAAGCAGATCATGGC............................................................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0
....................CACTGCTACGAAGCAGATCATGGCTCGGT.......................................................................................................................................................................................................... 29 0 5 0.20 1 0 1 0 0 0
...................................................................................................................................................................TTGTAACCCGGTCTAAAGGGAAAAAAA............................................................. 27 1 5 0.20 1 1 0 0 0 0
.......................TGCTACGAAGCAGATCATGGCTCG............................................................................................................................................................................................................ 24 0 5 0.20 1 1 0 0 0 0
.....................GCTGCTACGAAGCAGATCATGGCTCGGT.......................................................................................................................................................................................................... 28 1 5 0.20 1 0 0 1 0 0
.......................TGCTACGAAGCAGATCAT.................................................................................................................................................................................................................. 18 0 5 0.20 1 0 1 0 0 0
............................CGAAGCAGATCAAGGCTCGGTCCACT..................................................................................................................................................................................................... 26 1 5 0.20 1 0 1 0 0 0
............................CGAAGCAGATCATGGCTCGGTCCAC...................................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0
.............................GAAGCAGATCATGGCTCGGTCCAC...................................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
..........................AACGAAGCAGATCATGGCTCGGTCCACT..................................................................................................................................................................................................... 28 1 5 0.20 1 1 0 0 0 0
...........................ACGAAGCAGATCATGGCTCGGCCCACT..................................................................................................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0
.....................ACTGCTACGAAGCAGATCATGGCTCGG........................................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0
..........................AATGAAGCAGATCATGGCTCGGTCCACT..................................................................................................................................................................................................... 28 2 5 0.20 1 1 0 0 0 0
...................................................................................................................................................................GTGTAACCCGGTCTAAAGGGAAAA................................................................ 24 0 5 0.20 1 1 0 0 0 0
.......................TGCTACGAAGCAGATCATGGCCCGGT.......................................................................................................................................................................................................... 26 1 5 0.20 1 0 1 0 0 0
..................................................................................................................................................................CGTGTAACCCGGTCTAAAGGGAA.................................................................. 23 0 6 0.17 1 0 1 0 0 0
....................................................................................................AGACGACTGCAACTATGAC.................................................................................................................................... 19 2 6 0.17 1 0 0 0 0 1
.....................................................................................................................................GAAGCGCCCTTGTTGTCTA................................................................................................... 19 3 13 0.15 2 1 0 1 0 0
............................................................................................................................................................................................AAACCGTATTTCATCCTTTTAAAACAT.................................... 27 0 8 0.13 1 1 0 0 0 0
............................................................................................................................................................................................AAACCGTATTTCATCCTTTTAAAACA..................................... 26 0 8 0.13 1 1 0 0 0 0
...................................................................................................................................TGGAAGCGCCCTTGTTGTC..................................................................................................... 19 3 19 0.11 2 2 0 0 0 0
.................................................................................................CGTTGACGACTTGAACTA........................................................................................................................................ 18 2 12 0.08 1 0 1 0 0 0
.....................................................................................................................................................................TTCACCCGGTCGAAAGGGAA.................................................................. 20 3 17 0.06 1 0 0 1 0 0
..................................................................................................................................TTGGAAGACCCGTTGTTCG...................................................................................................... 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004785:27921-28171 + dwi_2151 A--GGAATAAGC---GGCAGTGAGAGTGACGATGCTTCGTCTAGTACCGAGCCAGGTGATGTCCGACGCAAGGCCCCTAATCGGAAATCTAAGCAGTGTCAGGCAACTGCTGACGTTGATAATGTTACTGGAGTTAACCTTCTCGG--CAACA-AT-AG-ATTTGCACCACTGCACATTGGGCCAG-ATTTCCCTTTTTTT---TGGCATAAAGTAGGAA--AATT--TTG---TAATG--CCAAAT-AAAAAAT-TTGA--CTAGATATTTGAAAAG
droMoj3 scaffold_6500:30754737-30754868 - A--TGACGCTATTGC------------------------------------------------------------------------------------------------------------------------ACCCCTCTCT-TGCACCA-CT-GG-ATT-CTACCACCGCACATTGGGCCAG-CGAG-CCGATTTTT---CGACGAAAATTCAAAT--T---TTTTATAG---AA--AGTAAA-CCTATTT-TGAG--AATAAAATTTTAGTAG
droGri2 scaffold_15245:12461776-12461879 + A--TATATTTA-------------------------------------------------------------------------------------------------------------------------------------------------------C-CCAACAGCGTACACTGGGCCAG-ATAG-CCATTTTTG---TGGCATAAATATAATG--AATTTTTTATAT---A------AAT-CATAATT-CTAA--TTAAATATTTTGAAAG
dp5 Unknown_singleton_3952:21791-21906 - A--ACTTTCC--C-----------------------------------------------------------------------------------------------------------------------------------CA--TGA-AA--AA--AAT-TCTCGCTCTTGCA-AGGGCTGGAATTC-CCAAATAAG---TGGCATAAAGTCGAAA--A---TTTTGTCG---AG--GCAAAT-ATTAATT-ATAT--TTCAATATATTGAAAG
droPer2 scaffold_177:12120-12238 - T--TATCTCTGTT-----------------------------------------------------------------------------------------------------------------------------------GA--CAA-AA--TAC-ATC-TCTCCGCTGCACTATGGTCCAG-AATT-CGTTTTTTT---TGGCATAAAGTCGAAA--T---TTTTATGT---GA--ATGGAT-TACGTTT-TTTC--TTGCAAATTCTCAAAG
droAna3 scaffold_13744:102780-102900 + T--TGATCTTCCT-----------------------------------------------------------------------------------------------------------------------------------CT--TAA-AAGGAAA-ATC-CCTACAGTGCACTGTGGTCCCA-AATC-CCGATTTGG---TGGCATAAAGTCCCAA--A---TTTCATGG---AA--GAAAAT-CTGAATT-TTTT--TTTTATATATTTAAAC
droBip1 scf7180000392154:272-391 - T--CAATACTTTT-----------------------------------------------------------------------------------------------------------------------------------GA--CAA------AG-ATT-TTACGACTGCACTATGGGCGAT-TTTT-CATAATGGG---CGGCATAAAGTCATAA--A---ATTTATGGTGAAATAT-TAAG-GAAATGT-TTTT--TTTATTAATAGAAAAC
droKik1 scf7180000299969:13723-13858 + T--GTTTTCGAA------------------------------------------------------------------------------------------------------------GCTACCTT-------TAACGATTCG-GCCACGA-C--TC-AGA-GGACCACTGCACATTGGGCCAG-CGAG-CCGATATAT---GGACGAAAATTCAAAT--T---GTTTATGG---AA--AGTAAA-CCTTTTT-TAAT--AAAAATATTTGAATAG
droFic1 scf7180000453960:4645-4790 - G--ACAACTACT-GTGGTCGACACAGCGATCATGGTTAAACTG--------------------------------------------------------------------------------------------GAACGCGTTG-GAGAC-------A-AGG-CAGCCATTCCACATTGGGCGGA-AACG-CCGATTTTT---TGGCATAAAGTCCAAA--A---TTATTTTGTTTAA-----TTT-CCC-CCTTTT-T---------TTTTATTCC
droRho1 scf7180000778302:1350-1491 - T--GATGTTGAT------------------------------------------------------------------------------------------------------------GATGGCCATGGCGATGAGTGCGGTGG--AAA-AG--GAC-ATT-CTGCCACTGGACATTGGGCCAG-CGAG-CCGATTTTT---CTACGAAAATTCAAAT--T---TTTCATAG---CA--AGTAAA-CATATTT-TAAT--AATAAAATTTGAATAG
droBia1 scf7180000302125:81920-82027 + AATTAATCTTGTT-----------------------------------------------------------------------------------------------------------------------------------G------------AT-ATT-CCCCCAGTGCACTATGGTCCAA-AAGC-CCAAATTTT---TGGCATAAATG-ATAT--T---TTTTTTG-TGAA----ATAAT--TT-ATTTTT-G-----TTTAATTTTTTGG
droTak1 scf7180000411306:1924-2025 + G--ACAAA-------------------------------------------------------------------------------------------------------------------------------------------------AGTAAATGCT-TCTACACTGCACATTGGGATGA-AAAGTCCTTTTTTT---TGGCATAAAGTCCAAA--A---TTATTTTGTCAA----ATA-T-TTG-TTT-T-----------TTTTTTATCC
droEug1 scf7180000409047:14402-14495 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCGCACTATGGCCCGG-ATTC-CCGATTTGG---TGGCATAAAGTCCAAA--A---TTTTATGG---AA--GAAAAT-CTG-AATTTT-TTTTTATATATTTAAACTA
dm3 chr3RHet:293270-293372 - G--ATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCACTGCACACTGGGCCAG-ATTC-CCCTTTTCCCTTTCGCATTAAGTCAAAA--AATT--TTG---TAAAT--TCTA-TTT-TGAAC-TTAA--CTATATATTATCAAAG
droSim2 2l:22500541-22500638 + T--TT---------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACAGTGCACCCTGGGCCAG-ATTC-CCTTTTTTT---TGGCATAAAGTCAAAC--AATT--TTG---TAAAT--TGTG-TTT-TGAAT-TTAA--CTATATATTATGAAAG
droSec2 scaffold_6:98185-98282 - T--TT---------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACAGTGCACCCTGGGCCAG-ATTC-CCTATTTTT---TGGCATAAAGTCAAAC--AATT--TTG---TAATT--TGTA-TTT-TGAAT-TTAA--CTATATATTATGAAAG
droYak3 v2_chr2h_random_005:639489-639599 - A--TAGATCTGT-----------------------------------------------------------------------------------------------------------------------------------------------------GT-TAGCCACTGCACACTAGCTTAG-ATTC-CCTTTTTTT-TAAGTCATAAAGTCAAAAAAAATT--TTG---TAAAT--TCTA-TTT-CGAAT-TTAA--CTATATATTAAGAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
A--GGAATAAGC---GGCAGTGAGAGTGACGATGCTTCGTCTAGTACCGAGCCAGGTGATGTCCGACGCAAGGCCCCTAATCGGAAATCTAAGCAGTGTCAGGCAACTGCTGACGTTGATAATGTTACTGGAGTTAACCTTCTCGG--CAACA-AT-AG-ATTTGCACCACTGCACATTGGGCCAG-ATTTCCCTTTTTTT---TGGCATAAAGTAGGAA--AATT--TTG---TAATG--CCAAAT-AAAAAAT-TTGA--CTAGATATTTGAAAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................TAGTACCGAGCCAGGTGATGTCCGA....................................................................................................................................................................................................................2513.00300030
...................................................................................................................................................................TGCACCACTGCACATTGGGCCAG-ATT........................................................................................2613.00303000
....................................TCGTCTAGTACCGAGCCAGGTGATG.........................................................................................................................................................................................................................2513.00302010
...................................................CCAGGTGATGTCCGACGCAAGGC............................................................................................................................................................................................................2313.00303000
.................................................................................CGGAAATCTAAGCAGTGTCAGGC..............................................................................................................................................................................2312.00202000
.......................................................................................................................................................................CCACTGCACATTGGGCCAG-ATTTCCCT...................................................................................2712.00202000
............................................................................CTAATCGGAAATCTAAGCAGTGT...................................................................................................................................................................................2312.00202000
.................................................................................CGGAAATCTAAGCAGTGTCAGGCAA............................................................................................................................................................................2512.00202000
.......................................................................................................................................................................CCACTGCACATTGGGCCAG-ATTTC......................................................................................2411.00101000
......................................................................................................................ATAATGTTACTGGAGTTAACCTTC........................................................................................................................................2411.00101000
..........................................................................................................................................................................CTGCACATTGGGCCAG-ATTTCCCT...................................................................................2411.00101000
....................................................................................................................TGATAATGTTACTGGAGTTAACCT..........................................................................................................................................2411.00101000
....................................................CAGGTGATGTCCGACGCAAGGCCCC.........................................................................................................................................................................................................2511.00101000
...........................................................................................................................................................T-AG-ATTTGCACCACTGCACATTGG.................................................................................................2411.00101000
............................................................GTCCGACGCAAGGCCCCTAAA.....................................................................................................................................................................................................2111.00101000
....................................................................................................................TGATAATGTTACTGGAGTTAACCTTC........................................................................................................................................2611.00101000
....GAATAAGC---GGCAGTGAGAGTGACGA......................................................................................................................................................................................................................................................2511.00101000
............................................TACCGAGCCAGGTGATGTCCG.....................................................................................................................................................................................................................2111.00101000
..................................................................................GGAAATCTAAGCAGTGTCAGGCAAC...........................................................................................................................................................................2511.00101000
...GGAATAAGC---GGCAGTGAGAGTGA.........................................................................................................................................................................................................................................................2311.00101000
.....................................................................................AATCTAAGCAGTGTCAGGCAACT..........................................................................................................................................................................2311.00101000
.................................................AGCCAGGTGATGTCCGACGCAAG..............................................................................................................................................................................................................2311.00101000
.....................................................................................................................GATAATGTTACTGGAGTTAACCTTC........................................................................................................................................2511.00101000
................................................................................TCGGAAATCTAAGCAGTGTCAGGC..............................................................................................................................................................................2411.00101000
.............................................................TCCGACGCAAGGCCCCTAATCGGAAATC.............................................................................................................................................................................................2811.00101000
...............................................................................................................GACGTTGATAATGTTACTGGAGTTAA.............................................................................................................................................2611.00101000
....................................TCGTCTAGTACCGAGCCAGGTGATGTCTT.....................................................................................................................................................................................................................2911.00101000
........................................CTAGTACCGAGCCAGGTGATGTCCGA....................................................................................................................................................................................................................2611.00101000
...................................................................................................................................................................TGCACCACTGCACATTGGGCCAG-A..........................................................................................2411.00101000
....................................TCGTCTAGTACCGAGCCAGGTGA...........................................................................................................................................................................................................................2350.80404000
....................................TCGTCTAGTACCGAGCCAGGT.............................................................................................................................................................................................................................2150.80403010
...........................................................................................AGCAGTGTCAGGCAACTGCTGACG...................................................................................................................................................................2440.75303000
...............................................................CGACGCAAGGCCCCTAATCGGA.................................................................................................................................................................................................2230.67202000
.................................GCTTCGTCTAGTACCGAGCCAGG..............................................................................................................................................................................................................................2350.60303000
...........................................................................................................................................................................TGCACATTGGGCCAG-ATTTCCCTTT.................................................................................2550.60302010
................................TGCTTCGTCTAGTACCGAGCCAGG..............................................................................................................................................................................................................................2450.60303000
.................................................................................................................................GGAGTTAACCTTCTCGG--CAACA-A...........................................................................................................................2320.50101000
..........................................................................................................................................CTTCTCGG--CAACA-AT-AG-ATTTGCAC..............................................................................................................2520.50110000
..........................................................................................................................................CTTCTCGG--CAACA-AT-AG-ATTTGCA...............................................................................................................2420.50101000
...................................................................................................................................AGTTAACCTTCTCGG--CAACA-AT-AG-AG....................................................................................................................2620.50101000
..................................................................................................................................GAGTTAACCTTCTCGG--CAACA-AT-AG-......................................................................................................................2520.50101000
...............................................................................................................................CTGGAGTTAACCTTCTCGG--CAACA-A...........................................................................................................................2520.50101000
.................................................................................................................................GGAGTTAACCTTCTCGG--CAACA-............................................................................................................................2220.50101000
...............................................................................................................................CTGGAGTTAACCTTCTCGG--CAACA-............................................................................................................................2420.50101000
....................................TCGTCTAGTACCGAGCCAGGTG............................................................................................................................................................................................................................2250.40202000
................................TGCTTCGTCTAGTACCGAGCCAGGTG............................................................................................................................................................................................................................2650.40202000
..........................TGACGATGCTTCGTCTAGTACCGAGC..................................................................................................................................................................................................................................2650.40202000
..............................................................................................................................................................................................................GCATAAAGTAGGAA--AATT--TTG---TAATG--.....................................2650.40202000
.................................GCTTCGTCTAGTACCGAGCCAG...............................................................................................................................................................................................................................2250.40202000
....................................TCGTCTAGTACCGAGCCAGG..............................................................................................................................................................................................................................2050.40202000
..................................................................................................TCAGGCAACTGCTGACGTTGA...............................................................................................................................................................2130.33100010
...............................................................................................GTGTCAGGCAACTGCTGACGTTG................................................................................................................................................................2330.33101000
...................................................................................................................................AGTTAACCTTCTCGG--CAACA-............................................................................................................................2030.33101000
...........................................................................................AGCAGTGTCAGGCAACTGCTGA.....................................................................................................................................................................2240.25101000
..............................................................................................................................................................................................................GCATAAAGTAGGAA--AATT--TTG---TAATG--C....................................2750.20101000
.................................GCTTCGTCTAGTACCGAGCCAGGTGA...........................................................................................................................................................................................................................2650.20101000
..................................CTTCGTCTAGTACCGAGCCAGGTGA...........................................................................................................................................................................................................................2550.20101000
................................TGCTTCGTCTAGTACCGAGCCAGGTGAA..........................................................................................................................................................................................................................2850.20101000
...........................................................................................................................................................................TGCACATTGGGCCAG-ATTTCCCTTTTT...............................................................................2750.20101000
................................TGCTTCGTCTAGTACCGAGCCAGGTGA...........................................................................................................................................................................................................................2750.20101000
..................................................................................................................................................................................................................AAAGTAGGAA--AATT--TTG---TAATG--CC...................................2450.20100010
...........................................................................................................................................................................TGCACATTGGGCCAG-ATTTCCCTTTTTT..............................................................................2850.20100100
..............................................................................................................................................................................................................GCATAAAGTAGGAA--AATT--TTG---TA..........................................2380.13110000
droMoj3
A--TGACGCTATTGC------------------------------------------------------------------------------------------------------------------------ACCCCTCTCT-TGCACCA-CT-GG-ATT-CTACCACCGCACATTGGGCCAG-CGAG-CCGATTTTT---CGACGAAAATTCAAAT--T---TTTTATAG---AA--AGTAAA-CCTATTT-TGAG--AATAAAATTTTAGTAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................CTCTCT-TGCACCA-CT-GG-ATT-CTACC.............................................................................................................25140.365100040
.......................................................................................................................................................................................................................................TAG---AA--AGTAAA-CCTATTT-TGAG--A...............2350.201100000
.......................................................................................................................................................................................................................................TAG---AA--AGTAAA-CCTATTT-TGAG--AA..............2450.201100000
.......................................................................................................................................................................................................................................TAG---AA--AGTAAA-CCTATTT-TGAG--AAT.............2550.201100000
...........................................................................................................................................CTCTCT-TGCACCA-CT-GG-ATT-CTACCAC...........................................................................................................27110.182100010
.....................................................................................................................................................................................................TTTT---CGACGAAAATTCAAAT--T---TTTT................................................2580.131100000
...........................................................................................................................................CTCTCT-TGCACCA-CT-GG-ATT-CTACCACC..........................................................................................................2880.131100000
...........................................................................................................................................CTCTCT-TGCACCA-CT-GG-ATT-CTACCA............................................................................................................26120.081100000
.................................................................................................................................................................................TTGGGCCAG-CGAG-CCGATTTTT---CGACGA....................................................................28170.061100000
.................................................................................................................................................................................TTGGGCCAG-CGAG-CCGATTTTT---CGACG.....................................................................27170.061100000
droGri2
A--TATATTTA-------------------------------------------------------------------------------------------------------------------------------------------------------C-CCAACAGCGTACACTGGGCCAG-ATAG-CCATTTTTG---TGGCATAAATATAATG--AATTTTTTATAT---A------AAT-CATAATT-CTAA--TTAAATATTTTGAAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
A--ACTTTCC--C-----------------------------------------------------------------------------------------------------------------------------------CA--TGA-AA--AA--AAT-TCTCGCTCTTGCA-AGGGCTGGAATTC-CCAAATAAG---TGGCATAAAGTCGAAA--A---TTTTGTCG---AG--GCAAAT-ATTAATT-ATAT--TTCAATATATTGAAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................TC-CCAAATAAG---TGGCATAAAGTCGAA...........................................................2691.0090900000000
.................................................................................................................................................................................................................TAAAGTCGAAA--A---TTTTGTCG---AG--GCA..................................2511.0010100000000
.............................................................................................................................................................................................TC-CCAAATAAG---TGGCATAAAGTCGAAA--........................................................2740.7530300000000
.................................................................................................................................................................................................................TAAAGTCGAAA--A---TTTTGTC.............................................1920.5010100000000
.................................................................................................................................................................................................................TAAAGTCGAAA--A---TTTTGTCG---A........................................2120.5010100000000
................................................................................................................................................................................................CCAAATAAG---TGGCATAAAGTCGAA...........................................................2490.1110100000000
.............................................................................................................................................................................................TC-CCAAATAAG---TGGCATAAAGTCGA............................................................2590.1110100000000
droPer2
T--TATCTCTGTT-----------------------------------------------------------------------------------------------------------------------------------GA--CAA-AA--TAC-ATC-TCTCCGCTGCACTATGGTCCAG-AATT-CGTTTTTTT---TGGCATAAAGTCGAAA--T---TTTTATGT---GA--ATGGAT-TACGTTT-TTTC--TTGCAAATTCTCAAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...TATCTCTGTT-----------------------------------------------------------------------------------------------------------------------------------GA--CAA-AA--TAC-ATC-TC................................................................................................................2511.001010000
droAna3
T--TGATCTTCCT-----------------------------------------------------------------------------------------------------------------------------------CT--TAA-AAGGAAA-ATC-CCTACAGTGCACTGTGGTCCCA-AATC-CCGATTTGG---TGGCATAAAGTCCCAA--A---TTTCATGG---AA--GAAAAT-CTGAATT-TTTT--TTTTATATATTTAAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................TGCACTGTGGTCCCA-AATC-CCGATT................................................................................2590.787340000
........................................................................................................................................................................CAGTGCACTGTGGTCCCA-AATC-CCGATT................................................................................2820.501100000
...........................................................................................................................................................................TGCACTGTGGTCCCA-AATC-CCGATTTGG---..........................................................................2890.333120000
..........................................................................................................................................................................GTGCACTGTGGTCCCA-AATC-CCGAT.................................................................................2530.331010000
...........................................................................................................................................................................TGCACTGTGGTCCCA-AATC-CCGATTTG..............................................................................2790.333120000
.....................................................................................................................................................................................TCCCA-AATC-CCGATTTGG---TGGCATA...................................................................25200.204040000
.............................................................................................................................................................................CACTGTGGTCCCA-AATC-CCGATT................................................................................23110.182020000
...........................................................................................................................................................................TGCACTGTGGTCCCA-AATC-CCGAC.................................................................................2490.111010000
........................................................................................................................................................................................CA-AATC-CCGATTTGG---TGGCATAAAGTCC.............................................................28110.091010000
................................................................................................................................................................................TGTGGTCCCA-AATC-CCGATTTGG---TG........................................................................25110.091100000
............................................................................................................................................................................GCACTGTGGTCCCA-AATC-CCGATTTG..............................................................................26110.091100000
............................................................................................................................................................................................ATC-CCGATTTGG---TGGCATAAAGTCCC............................................................26110.091010000
.............................................................................................................................................................................CACTGTGGTCCCA-AATC-CCGATTTG..............................................................................25110.091100000
............................................................................................................................................................................GCACTGTGGTCCCA-AATC-CCGATTTGG---..........................................................................27110.091010000
................................................................................................................................................................................TGTGGTCCCA-AATC-CCGATTTGG---TGGC......................................................................27110.091010000
.............................................................................................................................................................................CACTGTGGTCCCA-AATC-CCGATTTGG---..........................................................................26110.091100000
............................................................................................................................................................................................ATC-CCGATTTGG---TGGCATAAAGTC..............................................................24120.081100000
........................................................................................................................................................................................CA-AATC-CCGATTTGG---TGGCATAAAGT...............................................................26120.081010000
.....................................................................................................................................................................................................................................CATGG---AA--GAAAAT-CTGAATT-TT....................22120.081001000
............................................................................................................................................................................................ATC-CCGATTTGG---TGGCATAAAGT...............................................................23120.081100000
.........................................................................................................................................................................................A-AATC-CCGATTTGG---TGGCATAAAGTC..............................................................26120.081010000
........................................................................................................................................................................................CA-AATC-CCGATTTGG---TGGCATAAAG................................................................25120.081100000
.........................................................................................................................................................................................A-AATC-CCGATTTGG---TGGCATA...................................................................21200.051100000
..................................................................................................................................................................................TGGTCCCA-AATC-CCGATTTGG---TGGCATA...................................................................28200.051100000
..................................................................................................................................................................................TGGTCCCA-AATC-CCGATTTGG---TGGC......................................................................25200.051010000
droBip1
T--CAATACTTTT-----------------------------------------------------------------------------------------------------------------------------------GA--CAA------AG-ATT-TTACGACTGCACTATGGGCGAT-TTTT-CATAATGGG---CGGCATAAAGTCATAA--A---ATTTATGGTGAAATAT-TAAG-GAAATGT-TTTT--TTTATTAATAGAAAACSizeHit CountTotal NormTotal
No Reads
droKik1
T--GTTTTCGAA------------------------------------------------------------------------------------------------------------GCTACCTT-------TAACGATTCG-GCCACGA-C--TC-AGA-GGACCACTGCACATTGGGCCAG-CGAG-CCGATATAT---GGACGAAAATTCAAAT--T---GTTTATGG---AA--AGTAAA-CCTTTTT-TAAT--AAAAATATTTGAATAGSizeHit CountTotal NormTotal
No Reads
droFic1
G--ACAACTACT-GTGGTCGACACAGCGATCATGGTTAAACTG--------------------------------------------------------------------------------------------GAACGCGTTG-GAGAC-------A-AGG-CAGCCATTCCACATTGGGCGGA-AACG-CCGATTTTT---TGGCATAAAGTCCAAA--A---TTATTTTGTTTAA-----TTT-CCC-CCTTTT-T---------TTTTATTCCSizeHit CountTotal NormTotal
No Reads
droRho1
T--GATGTTGAT------------------------------------------------------------------------------------------------------------GATGGCCATGGCGATGAGTGCGGTGG--AAA-AG--GAC-ATT-CTGCCACTGGACATTGGGCCAG-CGAG-CCGATTTTT---CTACGAAAATTCAAAT--T---TTTCATAG---CA--AGTAAA-CATATTT-TAAT--AATAAAATTTGAATAGSizeHit CountTotal NormTotal
No Reads
droBia1
AATTAATCTTGTT-----------------------------------------------------------------------------------------------------------------------------------G------------AT-ATT-CCCCCAGTGCACTATGGTCCAA-AAGC-CCAAATTTT---TGGCATAAATG-ATAT--T---TTTTTTG-TGAA----ATAAT--TT-ATTTTT-G-----TTTAATTTTTTGGSizeHit CountTotal NormTotal
No Reads
droTak1
G--ACAAA-------------------------------------------------------------------------------------------------------------------------------------------------AGTAAATGCT-TCTACACTGCACATTGGGATGA-AAAGTCCTTTTTTT---TGGCATAAAGTCCAAA--A---TTATTTTGTCAA----ATA-T-TTG-TTT-T-----------TTTTTTATCCSizeHit CountTotal NormTotal
No Reads
droEug1
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCGCACTATGGCCCGG-ATTC-CCGATTTGG---TGGCATAAAGTCCAAA--A---TTTTATGG---AA--GAAAAT-CTG-AATTTT-TTTTTATATATTTAAACTASizeHit CountTotal NormTotal
No Reads
dm3
G--ATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCACTGCACACTGGGCCAG-ATTC-CCCTTTTCCCTTTCGCATTAAGTCAAAA--AATT--TTG---TAAAT--TCTA-TTT-TGAAC-TTAA--CTATATATTATCAAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................AAC-TTAA--CTATATATTATCAA..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
G--ATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCACTGCACACTGGGCCA.............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CACTGCACACTGGGCCAG-ATTC-CCCTT.................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCACTGCACACTGGG................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CACTGCACACTGGGCCAG-ATTC-CCC...................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTTCGCATTAAGTCAAAA--AAT.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................TTTCCCTTTCGCATTAAGTCAAAA--AA......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------TGACCACTGCACACTGGGCCA.............................................................................................2411.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TCGCATTAAGTCAAAA--AATT--TTG---............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CTTTTCCCTTTCGCATTAAGT...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CTGCACACTGGGCCAG-ATTC-CCC...................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTTCGCATTAAGTCAAAA--AATT--TTG---T...........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CTTTTCCCTTTCGCATTAAG................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................CCTTTCGCATTAAGTCAAC...........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TC-CCCTTTTCCCTTTCGCATTAAGTC..............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TTTCCCTTTCGCATTAAGTCAAAA--AAT.....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TA-TTT-TGAAC-TTAA--CTATATA.........2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
T--TT---------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACAGTGCACCCTGGGCCAG-ATTC-CCTTTTTTT---TGGCATAAAGTCAAAC--AATT--TTG---TAAAT--TGTG-TTT-TGAAT-TTAA--CTATATATTATGAAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................TAA--CTATATATTATGA...1630.33100000000010000000
droSec2
T--TT---------------------------------------------------------------------------------------------------------------------------------------------------------------TCTACAGTGCACCCTGGGCCAG-ATTC-CCTATTTTT---TGGCATAAAGTCAAAC--AATT--TTG---TAATT--TGTA-TTT-TGAAT-TTAA--CTATATATTATGAAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
A--TAGATCTGT-----------------------------------------------------------------------------------------------------------------------------------------------------GT-TAGCCACTGCACACTAGCTTAG-ATTC-CCTTTTTTT-TAAGTCATAAAGTCAAAAAAAATT--TTG---TAAAT--TCTA-TTT-CGAAT-TTAA--CTATATATTAAGAAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/18/2015 at 03:23 AM