ID:

dwi_2124

 Coordinate:

scf2_1100000004768:2263677-2263827 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

0.5 0.8 1.0

Flybase annnotation

CDS [Dwil\GK20557-cds]; exon [dwil_GLEANR_3309:4]; intron [Dwil\GK20557-in]

Repeatable elements

NameClassFamilyStrand
A-richLow_complexityLow_complexity+
(CAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAAAAACAAAAAAAAAACAAAAATAAAATAAAACAAACAAACAAACAAAAAAAAATAAGACAAAGAAAAAGAAAATACCAACAACAACAACAGCAACAATAGTAGTAACAGCAACAAAACAACCAACAACAAATCCAACAACAAAGTCAACATTAAAACCAACAACACTACAACAACATCCACACCGGTTAAACAAACAGCACAAGAACAACAACAACTACAAAATCCCGAACAAGGTGATATTCCGGAG
*************************************************************............................................................................................................********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
............................................................................................................................................................................................................AAGAACAACAACAACTACAAAATCCC..................... 26 0 1 1.00 1 1 0
.............................................................................................................................................ACAAAGTCAACATTAAAACCAACAACAC.................................................................................. 28 0 1 1.00 1 1 0
..................................................................................................TATAGTAGTAACAGTAACAAA.................................................................................................................................... 21 2 1 1.00 1 0 1
.............................................................CAAAGAAAAAGAAAATACCAACAA...................................................................................................................................................................... 24 0 1 1.00 1 1 0
.............................................................................................GCAAGAATAGTAGTAACA............................................................................................................................................ 18 1 1 1.00 1 0 1
...........................................AAACAAAAAAAAATCAGACAAA.......................................................................................................................................................................................... 22 1 4 0.25 1 1 0
.........................................................................................................................................................................................................................ACTACAAGTTGCCGAACAAG.............. 20 3 10 0.10 1 1 0
...........................................................................................................AACAGCGACAAAACAACCT............................................................................................................................. 19 2 10 0.10 1 1 0
.......................................................................................................................................................................................................................................AACAAGTTGATATTCCTGT. 19 3 20 0.10 2 2 0
......................................................AATAAAACAAAGAAAAAGA.................................................................................................................................................................................. 19 1 20 0.05 1 0 1
.............................................ACAAAAAAAAATAAGACT............................................................................................................................................................................................ 18 1 20 0.05 1 0 1

Anti-sense strand reads

TTTTTTTGTTTTTTTTTTGTTTTTATTTTATTTTGTTTGTTTGTTTGTTTTTTTTTATTCTGTTTCTTTTTCTTTTATGGTTGTTGTTGTTGTCGTTGTTATCATCATTGTCGTTGTTTTGTTGGTTGTTGTTTAGGTTGTTGTTTCAGTTGTAATTTTGGTTGTTGTGATGTTGTTGTAGGTGTGGCCAATTTGTTTGTCGTGTTCTTGTTGTTGTTGATGTTTTAGGGCTTGTTCCACTATAAGGCCTC
**********************************************************************************............................................................................................................************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V117
male body		 M020
head
 V119
head
.................................................................................................................................TGTTTAGTCTGTTGTTTCA....................................................................................................... 19 2 17 1.12 19 19 0 0 0
.................................................................................................................................TGTTTAGTTTGTTGTTTCCG...................................................................................................... 20 2 9 1.00 9 9 0 0 0
.................................................................................................................................TGTTTAGGCTGTTGTTTCC....................................................................................................... 19 2 9 0.44 4 4 0 0 0
.................................................................................................................................TGTTTAGTCTGTTGTTTCAG...................................................................................................... 20 2 6 0.33 2 1 0 0 1
............................................................................................................................................................................TTGTAGTAGGTGTGGCCGATTA......................................................... 22 3 5 0.20 1 0 1 0 0
................................................................................................................................................................................................................................TTAGGGCTAGTTACAATATAAG..... 22 3 5 0.20 1 0 0 1 0
...............................................................................................................................................................GGTTGTTTTGATGTTGTCGTAT...................................................................... 22 3 6 0.17 1 1 0 0 0
................................TTGTTTGTTTGTTTGTTT......................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0
..........................................................................................................................TCGTTGTTGTTTAGGTTATTG............................................................................................................ 21 2 20 0.05 1 0 1 0 0
....................................................................................................................TTTTGTGGGTTGTGGTTTGGGTT................................................................................................................ 23 3 20 0.05 1 0 1 0 0
............................................................................................................TGTCGTTGTTTTGTTGGGTCC.......................................................................................................................... 21 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004768:2263627-2263877 + dwi_2124 AAAAAAACAAAAAAA----------------AAACAAAAATAAAATAA------A---ACAAAC------A-AACAAA---------------------------------------------------------------------------------------------------------CAAAAAAAAATAA------------------------------------------------------------------------------------GACAAAGA------------AA---------------------AAG-----------AAAATA------------------------CCAACA----------AC------AACAACAGCAACAATAGTA------------GT--AACAGCAACAA---------AACAAC---CAACAAC---------------------------AAATCCAACAAC-----------------------AAAGTCAACAT----TA------------------------------------------A------AACCAACAA-CAC---------TACAACAACA---------TCCACACCGGT---------------TAAACAAAC-----------------------AG---C-ACA----------------------AGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------CAA---CAAC---AACTA----------C------AA---AATCCCGA-ACAA--------------GG------TGATATTCCGGAG-----------------
droVir3 scaffold_12970:7887274-7887494 - AACAAACAGACTAAC----------------AAACAAATATACAAAGC------A---GCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAA---------AAGTGCACAGT------------GCAATAACAACAACAACAACA-----------AC--AACAACAAC---AACAACAACAACA--------------ACA---------ACAACAACAACAACAACAA---C---------------------------------AACAACAACA-----------------------ACAACAACAA----CAACAACA---------------------------ACAACAACAAC--AACA----------------------------------------ACAACAACAAC---------------AACAACAAC-----------------------AA---CAACA----------------------ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------AAC---AAC-----AA-----------------
droMoj3 scaffold_6473:5702156-5702408 - ACAAACACAAATACA----------------AAAGAG-------CAAAAAACAGA---------AAGAAAA-A-----------------------------AAA-AAAA--------------------------AAAAAAAACAAAACAAAGAACT---T-----------AAT----C-------------------------------------------AAATTTCC----AGCAAATCATCG-AAATGGAAT--TGAGCATCGGAATTGCCAAG---------------------------CATTTAGCGA---------GCT--------------------------A-----------------TAACAACA--GC---AGCAGC---------AACATCAACAGCAGCAGCAG--------------------------------------------------------------------------------------------------------------------------CA------------------------------ACATCA--ACAGAA----------------------------------------AC------------------------------------GGCAA--CAGCAACAGCAACAG---CAACAACAACTG-------------------------C-------------------------------------------------AACAGCAATAG----------------------------------------------------------------------------------------CAA---CCAG-------------------------A------TCAC--------------------------TAT---TC-----GAA-----------------
droGri2 scaffold_15203:1310443-1310680 - ACAACAGCAAGAACA----------------ACAGCA-------ACAACAACTGC---------A------A------------------------------------------------------------------------------------------------------------------CAACAAGAGC------------------------------------------------------------------------------------AACAGCAAGAG---CAA---CACCAACAT------CAACA---AC--------------A---------------ACA---------GCAA--CAACAACAGC--AACAACAAC---TGCAACAACAACT--------------GCA---------ACAACAACTGCAA---------CAAC---------------------------AAGAGCAACAAC-----------------------AACATCAACAA----CAACAGCA---------------------------ACAACAACAGC--AACA----------------------------------------ACAACAGCAAC---------------AACAACAGC-----------------------AA---CAACA----------------------ACAGCAACAACAACA-------------------------------------------G----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------ACC---AAC-----AA-----------------
dp5 XR_group6:8816413-8816653 - AAAAACAACAGCACC----------------AAAAACATCGAAAATAACGCCAAC---------A------A-AAACA-----------------------------------------------------------------------------------------------------------------CCGAC------------------------------------------------------------------------------------AACAACAGAAC---CTA---GA------A------CAACA---AC--------------AACA------------------------CCAACA----------AC---AACAGC---AACATCAACAACA------------AC--A---------AACGCAACACCAAAAA---CAACAAC---------------------------AGCACCTAAAAC-----------------------AACAACAACAT----CA-----------ACA----------------------ACAACA---------------ACAAATCAAACAATAACAC------------------CAAAAAC---------------AACACAAAC-----------------------AG---CAACA----------------------CCAACAACACCAA-------------------------------------------CAA----------------------------------------------------------------------------------------------------TAT---C--------------------------------------------------------------------ACCAACAACTAAA-----------------
droPer2 scaffold_23:1625455-1625686 - CAACAAACAACAACA----------------AAACGAAGGAAG-AAAAAACCAAC---------A------AAACAAACATAGTACAAAGGATTCATCAATTTTA-CAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------------AA---------------------AAC-----------AAAAAC------------------------CAAGC----------------AACAGC---AACAACAACAAAT-----------------------------------------------------------ATTCATAAAGCGATAAAAAAAAATATCAAAACA-----------------------AA---------------------------AGCAAAATTTAATCAATAAA-----A---A------AATAAAAAA-AAC---------AACAACAATA---------TATATATC-------------------------------------------------------------------------TTAAAAATAC---------CA---A----------------------------------------CAA----------------------------------------------------------------------------------------------------CAACAACAAC--------------------------------------------------------------------A-------AC-----------------
droAna3 scaffold_13117:4523092-4523307 - AAAAAAAAAAAAATA----------------GATAAAAAACAAAACAA------G---AAAAAC------A-GAAAATAAAACA-------------------------------------AAAATAAAG---AAAAAAACAAACA-----GGACACGGTGAAAAA---AAGAAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------AACAGC---AACAACATCATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATC---------------AACAACAAC-----------------------AA---CATCA----------------------ACAACAGAAACAGCAACAACAACAACAACAAGTG----------TA-----------------------------------------------------------------------------------------------------------------------------------------------------G---TGTGTCGC-ACAAGTGCGACCTGTGCGGG------TGAAATAATGAAG-----------------
droBip1 scf7180000396434:620799-621047 + ACAACAACAAAAATT----------------ACAAAA-------ACAACAACAAACACAAAAA---------------------------------------TTA-CAAA-----------------------------------------------------------------------AACAACAACAAAAAC------------------------------------------------------------------------------------AACAACAA------------AA---------------------ACA-----------AAAATTACAAAAACAACAACA---------AAAA--CAACAACAAA--AACAAAAAC---C--------------------------------------A------------------CAACAACAACAAAAATTACAACA---------------------A--------------CAACAACAAAAATTACAAC--GAAACAACAAAA---------------------------A-----------------------T-TAC---------AACAACAACA---------AACACAAAAAT---------------TACAAAAAC-----------------------AA---CAACA----------------------AAAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---AAAC--------------------------------------------------------------AAC---AAC-----AA-----------------
droKik1 scf7180000302592:702839-703121 + AACAAAACAAAAAAA----------------GCCGCC-------AAAAAAATTCAAACAAAAA---------------------------------------TTG-CAAGCAAAACAAACAAAAATAAGAAACAAAAAATGAAACA-----AGAGAGAACGAAAAA--GGAGCGACGAAA----------------CAGCATCAGAAACAA-----------------------------------------------------------------------------CAG---T-----------------------------------------------------------------------------------------------------------------------------------T---------------------AAC--------------------------------------------------------------------------------------------------------------TTTGGTGTATCAA-----C---A-----ACAATTACAG-AAC---------GGCAACAAATCATCTTCCATTAGCAACGGCATTAACAATAGTAAC---------TAAAA-----C------------AA---CA----------------------------------A------------CAACGACAGCCGCTGGAGGAG--------------------------------------------------------------------------------------------------------------------GAG---GAAC---A----ACAACACAAGCAG----------CGCCCAA-CCAA--------------GGTCAACT---TT-----TGG-----------------
droFic1 scf7180000453438:40056-40320 - AACAGCAGGATCAGC----------------AGAAAGATG------ACC---AG---CAGC---A------A------------------------------CCA-CAGC-----------------------------------------------------------------------AACAACAACAAATTC------------------------------------------------------------------------------------AAGAGCAG------------CT---------------------GGG-----------AGAACT------------------------CCTAAA----------GC---AACAGC---AGCAGCAACAGCA------------GC--A---------------------AACACAGCAACGACACCAACAATTCCAACA---------------------G--------------CAACTGTGGCAACTACAACGA----CA-----------ACAGC----------------------AGAA---------------TCAGCAGAAAGATGACCAG------------------CAGCAAC---------------CACAGGAAC------AGCA--ACAATTTCAACAGCAGCAACA----------------------------------------------------ATTA----------CAAGAAAAGCTTGGA----------------------------------------------------------------------------------------------------CAA---C--------------------------------------------------------------------TGCAACAGCAGAA-----------------
droEle1 scf7180000490751:971131-971349 + AGAAACAGAAACAGA----------------ACATAAACA------TTC---GA---CAAC---A------A------------------------------CAA-CAAT-----------------------------------------------------------------------AACAATAGCAATAAC------------------------------------------------------------------------------------AAGTGCAG------------CG---------------------ACA-----------AATATA------------------------CCAACT----------GC------AGC--------------------------------------------AACAAC---------------------------------------------AACAGTAACAAC-----------------------AACAGCAACAA----CAACAGCAACAAC--AAC----------------AGCAACAACAAC--AGCA----------------------------------------ACAACAACAAC---------------AACAACAACAACAACAGCA--GCAACAACAACAG----------------------------------------------------CAACAACAAGAA----------CAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAACGAAAAAG-----------------
droRho1 scf7180000779985:424282-424542 - AACAAAACAAATACA----------------AACAAA-------ATAAC-ATTGT---------A------A------------------------------------------------------------------------------------------------------------------------------------TAAAAAAAGC-A----------------------------------------------------------------AACCGCACGAC---AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGAAAAGGCAATAACAACAGAAAC---------CACCA------------------AG---CC----------------------------------A------------CAAAGCCAGCCACCGAAAGAGATAG-------------AGCGCTGAAACAA-AAAAGGCGAAATACGAAAAGTAAAAACCCTGAAAACCCCCTTTGAAAACCCCCATTGAAAACCGCCTGGAAAACCACTAGAAGCCCGC---TACAAAATGTTA----------C------AA---AACTCGAA-C--------------GCCGC------TGCCGCAGCGCAG-----------------
droBia1 scf7180000297886:2-227 - ACAAGAACAAGAACA----------------AGAACA-------AGAACAAGAAC---------A------A------------------------------------------------------------------------------------------------------------------GAACAAGAAC------------------------------------------------------------------------------------AAGAACAAGAA---CAA---GAACAAGAA---------CAAGAACA-----------------------------------------AGA-----------AC--AATAACAAT---AACAATAACAATA--------------ACA---------ATAACAATAACAATAACAA---T---------------------------------AACAATAACA-----------------------ATAACAATAA----CAATAACA---------------------------ATAACAATAAC--AATA----------------------------------------ACAATAACAAT---------------AACAATAAC-----------------------AA---TAACA----------------------ATAACAATAACAATA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---TAAC--------------------------------------------------------------AAT---AAC-----AA-----------------
droTak1 scf7180000415352:519064-519301 - ACAGCAGCAAAATCA----------------ACAGGC-------AAAGCAGCAGC---------A------A------------------------------------------------------------------------------------------------------------------AATCAGCAGA------------------------------------------------------------------------------------CAAAGCAGCAG---TTA---AATCAGACA---------CCTAAACAGCA--------------------------G-----------------G-----------CAAAACAGC---AACAGAAACAGCAGCCCAAGCAGCAG-----------------------CAAAATCAG---A---------------------------------AGCCAAAACA-----------------------GC---------------------------AAC----------------------AAA-----AT---------C-A------------------------------GC------------------------------------AGAAG--------------------------AAGCTGTCGCCAAAACAGTCGC----C-----A---G----------------------------------------TAGTAG-------------------------------------------------------------------------------------------------T-------AC---A----ACAATCAAAACCGCAACCAAGCACACCC-ACCAAA--------------GT------TAACAACCAGGAG-----------------
droEug1 scf7180000409631:95003-95243 + AAACAAACAAACAAAC---------------AAACAAACAA---------ACAAACAAACAAAC------A-AACAAA---------------------------------------------------------------------------------------------------------CA----------------------------------------------------------------------------------------------------AACAAA---CAA---ACAAACAAA---------CAAACAAA-----------CAA---------------ACAACAACAACAACA-----------AC--AACAACAAC---AACAACAACAACA--------------ACA---------ACAACAACAACAACAACAA---C---------------------------------AACAACAACA-----------------------ACAACAACAA----CAACAACA---------------------------ACAACAACAAC--AACA----------------------------------------ACAACAACAAC---------------AACAACAAC-----------------------AA---CAACA----------------------ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------AAC---AAC-----AA-----------------
dm3 chrUextra:28738544-28738790 + ACACAAACACAAACA----------------CAAACA-------CAAAC-ACAAACACAAACA--------------------------------------------------------------------------------------------------------------------------------CAGGC------------------------------------------------------------------------------------ACAAACACAAA---CAC---AAACACAAA---------CACAAACA-----------CAA---------------AC----------------------------ACAAACACA---AACACAAACACAA--------------ACA---------CAAACACAAACACAAACAC---A---------------------------------AACACAAACACAAACACAAACACAA--------ACACAA----------------------------------------------ACACAAACACAAACACAAACAC-A-----------AACACAAACA---------CAAACACAAAC---------------GGCAAACAC-----------------------AA---ACACA----------------------AACACAAACACAAAC-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---ACAC--------------------------------------------------------------AAA---CA-----CGG-----------------
droSim2 x:5371909-5372168 + CGGAAGAGACAACAA----------------CAACAACGACC--------AAGAA------------------------------------------------------------------------------------------------------------------------------------ACCAGAGCC------------------------------------------------------------------------------------AACAACCATGGTGGCACCACGA------A------CAACA---AA--------------AACA------------------------TCAGCA----------AC---CGAAGC---GGCAGCAGCAGCA--------------GCA---------GCAGCAGCAACTAGCA---CAACAACAGCAGCAACTTCCGCT---------------------G--------------CCACAACAAC------------------------------A----------------------ACAACA--ACGAGC----------------------------------------AC------------------------------------AGCAG--CAGCAGCAGCGACAG---CGACAACAACTAGCCATGCCACGCCCAC----G-----G---A----------------------------------------CAAGAG-------------------------------------------------------------------------------------------------CAA---CAGC---AA---------------------------------------------------------CAA---CA-----TGGCACATCCCATACATCCC
droSec2 scaffold_8:1950284-1950537 - AAATAATTGGCTTATTTTCAGTACAAATACAAAGCAC-------AAAAAAAAACA---------ACAAAAA-A-----------------------------TCACAAAA--------------------------AAATAAAACGAAACGAGAGCATATA---ACATAAA----------------------------------------------------------------AAC--------CCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------CAAAAACGATC------GGCTCAG--------------------------------------------------------------------------------------------------------------------------CA------------------------------GAGCCA--ACG-AA----------------------------------------AA------------------------------------GCAAA--CAGCAATAGCAGCAG---GAGCAGAGGATG-------------------------C-------------------------------------------------ACCACTGATCCCGGAGAGCTCGAGACATGAGAAGCGGAA------------------------------------------------------------CA---------------------CCGAGCAGCCACCA---AGCATCGA-CTTA--------------TG-----TAGCGGTCCATGAC-----------------
droYak3 2L:17864077-17864297 - AGCAAACCAAGCAAGA---------A-----AAACAAAAACCAAATCC------A---AAAAAC------A-GAAATAGAAACA-------------------------------------GAAACAGAA---ACCTAA---AACT-----TTAGCAAACA---ACAAAAAACACCACAA----------------CAACCACATCAATAA-----------------------------------------------------------------------------CAG---A-----------------------------------------------------------------------------------------------------------------------------------G-------------------------------C---------------------------------ATTTTGTACA-----------------------ACAAGCACAG----CGAAAGCT---------------------------AGCAAAGTCCC--ACCA----------------------------------------TTATCATCATC---------------AACAACAAT-----------------------AA---TAACA----------------------ACAACAACAACAACA-------------------------------------------G----------------------------------------------------------------------------------------------------CAG---CAAC--------------------------------------------------------------AAA---AAC-----TC-----------------
droEre2 scaffold_4770:7679360-7679570 - ACAACAACAACAACA----------------ACACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------CATCATCATCAACAACAACAAGCAAACAGAC-----AACAAG--------CGAAAGCAACACCGAGTGCGTTGGC-TCACCAAG---------------------------CAAC-CACAC---------ACA--------------------------A-----------------TCACACCA--AC---AACAGC---------AACAACAACA----------------------------------------------------------------------------------------------------------------GCTGCAAC--ACAAC--------------AAC----------------------ACG-----AG---------C-A------------------------------GC------------------------------------AACAA--------------------------CAGCAATTGCCACCACAGTCAC----C-----A---A----------------------------------------CAGCAG-------------------------------------------------------------------------------------------------CAG---CAAC---A--------------------------------------------------------------ACAACACATGAG-----------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
AAAAAAACAAAAAAA----------------AAACAAAAATAAAATAA------A---ACAAAC------A-AACAAA---------------------------------------------------------------------------------------------------------CAAAAAAAAATAA------------------------------------------------------------------------------------GACAAAGA------------AA---------------------AAG-----------AAAATA------------------------CCAACA----------AC------AACAACAGCAACAATAGTA------------GT--AACAGCAACAA---------AACAAC---CAACAAC---------------------------AAATCCAACAAC-----------------------AAAGTCAACAT----TA------------------------------------------A------AACCAACAA-CAC---------TACAACAACA---------TCCACACCGGT---------------TAAACAAAC-----------------------AG---C-ACA----------------------AGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------CAA---CAAC---AACTA----------C------AA---AATCCCGA-ACAA--------------GG------TGATATTCCGGAG-----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------AGAA-----------------------------------------------------------------------------------------------------------------------------------------------------------CAA---CAAC---AACTA----------C------AA---AATCCC...........................................................2611.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------------------AAAGTCAACAT----TA------------------------------------------A------AACCAACAA-CAC---------.....................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
..........................................................................................................................................................................................................................................................................................CAAAGA------------AA---------------------AAG-----------AAAATA------------------------CCAACA----------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.............................................................................A---------------------------------------------------------------------------------------------------------CAAAAAAAAATAA------------------------------------------------------------------------------------GACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
droVir3
AACAAACAGACTAAC----------------AAACAAATATACAAAGC------A---GCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAA---------AAGTGCACAGT------------GCAATAACAACAACAACAACA-----------AC--AACAACAAC---AACAACAACAACA--------------ACA---------ACAACAACAACAACAACAA---C---------------------------------AACAACAACA-----------------------ACAACAACAA----CAACAACA---------------------------ACAACAACAAC--AACA----------------------------------------ACAACAACAAC---------------AACAACAAC-----------------------AA---CAACA----------------------ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------AAC---AAC-----AA-----------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAC---AACAACAACAACA--------------ACA---------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.306006000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-----------------------AA---CAACA----------------------ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---C..................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA----------------------ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------AAC---...........................29200.051000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--AACA----------------------------------------ACAACAACAAC---------------AACAACAAC-----------------------AA---C..................................................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC---------------AACAACAAC-----------------------AA---CAACA----------------------ACAAC...................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAAC--AACA----------------------------------------ACAACAACAAC---------------AAC.....................................................................................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC-----------------------AA---CAACA----------------------ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------C........................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC-----------------------AA---CAACA----------------------ACAACAACAACAAC..........................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAAC---------------AACAACAAC-----------------------AA---CAACA----------------------AC......................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC--AACA----------------------------------------ACAACAACAAC---------------AACAACAAC-----------------------........................................................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC---------------AACAACAAC-----------------------AA---CAACA----------------------ACAACAAC................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------------------ACAACAACAAC--AACA----------------------------------------ACAACAACAAC---------------........................................................................................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----CAACAACA---------------------------ACAACAACAAC--AACA----------------------------------------ACAAC.............................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CAACA----------------------ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------.................................29200.051000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------AAC---AAC-----...................29200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA---------------------------ACAACAACAAC--AACA----------------------------------------ACAACAAC..........................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------AACAACAAC-----------------------AA---CAACA----------------------ACAACAACAAC.............................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA----------------------------------------ACAACAACAAC---------------AACAACAAC-----------------------AA---CAAC...............................................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAAC--AACA----------------------------------------ACAACAACAAC---------------AACAAC..................................................................................................................................................................................................................................................................................................................................29200.051000000000000000001000000000000000000000000000000000000000000000
droMoj3
ACAAACACAAATACA----------------AAAGAG-------CAAAAAACAGA---------AAGAAAA-A-----------------------------AAA-AAAA--------------------------AAAAAAAACAAAACAAAGAACT---T-----------AAT----C-------------------------------------------AAATTTCC----AGCAAATCATCG-AAATGGAAT--TGAGCATCGGAATTGCCAAG---------------------------CATTTAGCGA---------GCT--------------------------A-----------------TAACAACA--GC---AGCAGC---------AACATCAACAGCAGCAGCAG--------------------------------------------------------------------------------------------------------------------------CA------------------------------ACATCA--ACAGAA----------------------------------------AC------------------------------------GGCAA--CAGCAACAGCAACAG---CAACAACAACTG-------------------------C-------------------------------------------------AACAGCAATAG----------------------------------------------------------------------------------------CAA---CCAG-------------------------A------TCAC--------------------------TAT---TC-----GAA-----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............A----------------AAAGAG-------CAAAAAACAGA---------AA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000010
............................................................................................................................................................................................................................................................................................................................................................................................A--GC---AGCAGC---------AACATCAACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.252200000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---------AACATCAACAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACTG-------------------------C-------------------------------------------------AACAGC......................................................................................................................................................................................................18200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................C---------AACATCAACAGCAGCAGCAG--------------------------------------------------------------------------------------------------------------------------CA------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
droGri2
ACAACAGCAAGAACA----------------ACAGCA-------ACAACAACTGC---------A------A------------------------------------------------------------------------------------------------------------------CAACAAGAGC------------------------------------------------------------------------------------AACAGCAAGAG---CAA---CACCAACAT------CAACA---AC--------------A---------------ACA---------GCAA--CAACAACAGC--AACAACAAC---TGCAACAACAACT--------------GCA---------ACAACAACTGCAA---------CAAC---------------------------AAGAGCAACAAC-----------------------AACATCAACAA----CAACAGCA---------------------------ACAACAACAGC--AACA----------------------------------------ACAACAGCAAC---------------AACAACAGC-----------------------AA---CAACA----------------------ACAGCAACAACAACA-------------------------------------------G----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------ACC---AAC-----AA-----------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------CAAC---------------------------AAGAGCAACAAC-----------------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
dp5
AAAAACAACAGCACC----------------AAAAACATCGAAAATAACGCCAAC---------A------A-AAACA-----------------------------------------------------------------------------------------------------------------CCGAC------------------------------------------------------------------------------------AACAACAGAAC---CTA---GA------A------CAACA---AC--------------AACA------------------------CCAACA----------AC---AACAGC---AACATCAACAACA------------AC--A---------AACGCAACACCAAAAA---CAACAAC---------------------------AGCACCTAAAAC-----------------------AACAACAACAT----CA-----------ACA----------------------ACAACA---------------ACAAATCAAACAATAACAC------------------CAAAAAC---------------AACACAAAC-----------------------AG---CAACA----------------------CCAACAACACCAA-------------------------------------------CAA----------------------------------------------------------------------------------------------------TAT---C--------------------------------------------------------------------ACCAACAACTAAA-----------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................A------A------CAACA---AC--------------AACA------------------------CCAACA----------AC---AAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010001000000
............................................................................................................................................................................................................................................................................................................................AACA---AC--------------AACA------------------------CCAACA----------AC---AA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.0610010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAT----CA-----------ACA----------------------ACAACA---------------ACA................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
droPer2
CAACAAACAACAACA----------------AAACGAAGGAAG-AAAAAACCAAC---------A------AAACAAACATAGTACAAAGGATTCATCAATTTTA-CAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCA------------AA---------------------AAC-----------AAAAAC------------------------CAAGC----------------AACAGC---AACAACAACAAAT-----------------------------------------------------------ATTCATAAAGCGATAAAAAAAAATATCAAAACA-----------------------AA---------------------------AGCAAAATTTAATCAATAAA-----A---A------AATAAAAAA-AAC---------AACAACAATA---------TATATATC-------------------------------------------------------------------------TTAAAAATAC---------CA---A----------------------------------------CAA----------------------------------------------------------------------------------------------------CAACAACAAC--------------------------------------------------------------------A-------AC-----------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AAAAAAAAAAAAATA----------------GATAAAAAACAAAACAA------G---AAAAAC------A-GAAAATAAAACA-------------------------------------AAAATAAAG---AAAAAAACAAACA-----GGACACGGTGAAAAA---AAGAAATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------AACAGC---AACAACATCATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATC---------------AACAACAAC-----------------------AA---CATCA----------------------ACAACAGAAACAGCAACAACAACAACAACAAGTG----------TA-----------------------------------------------------------------------------------------------------------------------------------------------------G---TGTGTCGC-ACAAGTGCGACCTGTGCGGG------TGAAATAATGAAG-----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................AG---AAAAAAACAAACA-----GGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.................................................................................................................................G---AAAAAAACAAACA-----GGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...............................................................................................................................AAG---AAAAAAACAAACA-----GGACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501010000
.....................................................................................................................................AAAAAAACAAACA-----GGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.332020000
.....................................................................................................................................AAAAAAACAAACA-----GGACACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAACAAGT.......................................................................................................................................................................................................................................20190.326041010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAAGT.......................................................................................................................................................................................................................................19200.153020010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAC-----------------------AA---CATCA----------------------ACAAC...................................................................................................................................................................................................................................................................21150.071010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAACAACAAC...........................................................................................................................................................................................................................................20200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAACAACAACA..........................................................................................................................................................................................................................................21200.051010000
droBip1
ACAACAACAAAAATT----------------ACAAAA-------ACAACAACAAACACAAAAA---------------------------------------TTA-CAAA-----------------------------------------------------------------------AACAACAACAAAAAC------------------------------------------------------------------------------------AACAACAA------------AA---------------------ACA-----------AAAATTACAAAAACAACAACA---------AAAA--CAACAACAAA--AACAAAAAC---C--------------------------------------A------------------CAACAACAACAAAAATTACAACA---------------------A--------------CAACAACAAAAATTACAAC--GAAACAACAAAA---------------------------A-----------------------T-TAC---------AACAACAACA---------AACACAAAAAT---------------TACAAAAAC-----------------------AA---CAACA----------------------AAAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---AAAC--------------------------------------------------------------AAC---AAC-----AA-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
AACAAAACAAAAAAA----------------GCCGCC-------AAAAAAATTCAAACAAAAA---------------------------------------TTG-CAAGCAAAACAAACAAAAATAAGAAACAAAAAATGAAACA-----AGAGAGAACGAAAAA--GGAGCGACGAAA----------------CAGCATCAGAAACAA-----------------------------------------------------------------------------CAG---T-----------------------------------------------------------------------------------------------------------------------------------T---------------------AAC--------------------------------------------------------------------------------------------------------------TTTGGTGTATCAA-----C---A-----ACAATTACAG-AAC---------GGCAACAAATCATCTTCCATTAGCAACGGCATTAACAATAGTAAC---------TAAAA-----C------------AA---CA----------------------------------A------------CAACGACAGCCGCTGGAGGAG--------------------------------------------------------------------------------------------------------------------GAG---GAAC---A----ACAACACAAGCAG----------CGCCCAA-CCAA--------------GGTCAACT---TT-----TGG-----------------SizeHit CountTotal NormTotal
No Reads
droFic1
AACAGCAGGATCAGC----------------AGAAAGATG------ACC---AG---CAGC---A------A------------------------------CCA-CAGC-----------------------------------------------------------------------AACAACAACAAATTC------------------------------------------------------------------------------------AAGAGCAG------------CT---------------------GGG-----------AGAACT------------------------CCTAAA----------GC---AACAGC---AGCAGCAACAGCA------------GC--A---------------------AACACAGCAACGACACCAACAATTCCAACA---------------------G--------------CAACTGTGGCAACTACAACGA----CA-----------ACAGC----------------------AGAA---------------TCAGCAGAAAGATGACCAG------------------CAGCAAC---------------CACAGGAAC------AGCA--ACAATTTCAACAGCAGCAACA----------------------------------------------------ATTA----------CAAGAAAAGCTTGGA----------------------------------------------------------------------------------------------------CAA---C--------------------------------------------------------------------TGCAACAGCAGAA-----------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGAAACAGAAACAGA----------------ACATAAACA------TTC---GA---CAAC---A------A------------------------------CAA-CAAT-----------------------------------------------------------------------AACAATAGCAATAAC------------------------------------------------------------------------------------AAGTGCAG------------CG---------------------ACA-----------AATATA------------------------CCAACT----------GC------AGC--------------------------------------------AACAAC---------------------------------------------AACAGTAACAAC-----------------------AACAGCAACAA----CAACAGCAACAAC--AAC----------------AGCAACAACAAC--AGCA----------------------------------------ACAACAACAAC---------------AACAACAACAACAACAGCA--GCAACAACAACAG----------------------------------------------------CAACAACAAGAA----------CAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAACGAAAAAG-----------------SizeHit CountTotal NormTotal
No Reads
droRho1
AACAAAACAAATACA----------------AACAAA-------ATAAC-ATTGT---------A------A------------------------------------------------------------------------------------------------------------------------------------TAAAAAAAGC-A----------------------------------------------------------------AACCGCACGAC---AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGAAAAGGCAATAACAACAGAAAC---------CACCA------------------AG---CC----------------------------------A------------CAAAGCCAGCCACCGAAAGAGATAG-------------AGCGCTGAAACAA-AAAAGGCGAAATACGAAAAGTAAAAACCCTGAAAACCCCCTTTGAAAACCCCCATTGAAAACCGCCTGGAAAACCACTAGAAGCCCGC---TACAAAATGTTA----------C------AA---AACTCGAA-C--------------GCCGC------TGCCGCAGCGCAG-----------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACAAGAACAAGAACA----------------AGAACA-------AGAACAAGAAC---------A------A------------------------------------------------------------------------------------------------------------------GAACAAGAAC------------------------------------------------------------------------------------AAGAACAAGAA---CAA---GAACAAGAA---------CAAGAACA-----------------------------------------AGA-----------AC--AATAACAAT---AACAATAACAATA--------------ACA---------ATAACAATAACAATAACAA---T---------------------------------AACAATAACA-----------------------ATAACAATAA----CAATAACA---------------------------ATAACAATAAC--AATA----------------------------------------ACAATAACAAT---------------AACAATAAC-----------------------AA---TAACA----------------------ATAACAATAACAATA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---TAAC--------------------------------------------------------------AAT---AAC-----AA-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACAGCAGCAAAATCA----------------ACAGGC-------AAAGCAGCAGC---------A------A------------------------------------------------------------------------------------------------------------------AATCAGCAGA------------------------------------------------------------------------------------CAAAGCAGCAG---TTA---AATCAGACA---------CCTAAACAGCA--------------------------G-----------------G-----------CAAAACAGC---AACAGAAACAGCAGCCCAAGCAGCAG-----------------------CAAAATCAG---A---------------------------------AGCCAAAACA-----------------------GC---------------------------AAC----------------------AAA-----AT---------C-A------------------------------GC------------------------------------AGAAG--------------------------AAGCTGTCGCCAAAACAGTCGC----C-----A---G----------------------------------------TAGTAG-------------------------------------------------------------------------------------------------T-------AC---A----ACAATCAAAACCGCAACCAAGCACACCC-ACCAAA--------------GT------TAACAACCAGGAG-----------------SizeHit CountTotal NormTotal
No Reads
droEug1
AAACAAACAAACAAAC---------------AAACAAACAA---------ACAAACAAACAAAC------A-AACAAA---------------------------------------------------------------------------------------------------------CA----------------------------------------------------------------------------------------------------AACAAA---CAA---ACAAACAAA---------CAAACAAA-----------CAA---------------ACAACAACAACAACA-----------AC--AACAACAAC---AACAACAACAACA--------------ACA---------ACAACAACAACAACAACAA---C---------------------------------AACAACAACA-----------------------ACAACAACAA----CAACAACA---------------------------ACAACAACAAC--AACA----------------------------------------ACAACAACAAC---------------AACAACAAC-----------------------AA---CAACA----------------------ACAACAACAACAACA-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---CAAC--------------------------------------------------------------AAC---AAC-----AA-----------------SizeHit CountTotal NormTotal
No Reads
dm3
ACACAAACACAAACA----------------CAAACA-------CAAAC-ACAAACACAAACA--------------------------------------------------------------------------------------------------------------------------------CAGGC------------------------------------------------------------------------------------ACAAACACAAA---CAC---AAACACAAA---------CACAAACA-----------CAA---------------AC----------------------------ACAAACACA---AACACAAACACAA--------------ACA---------CAAACACAAACACAAACAC---A---------------------------------AACACAAACACAAACACAAACACAA--------ACACAA----------------------------------------------ACACAAACACAAACACAAACAC-A-----------AACACAAACA---------CAAACACAAAC---------------GGCAAACAC-----------------------AA---ACACA----------------------AACACAAACACAAAC-------------------------------------------A----------------------------------------------------------------------------------------------------CAA---ACAC--------------------------------------------------------------AAA---CA-----CGG-----------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAACAC-----------------------AA---ACACA----------------------AAG.....................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAACACAA--------ACACAA----------------------------------------------ACACAAACACA.............................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AACACAAA---------CACAAACA-----------CAA---------------AC----------------------------ACAAACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AACACAAACA----------------CAAACA-------CAAAC-ACAAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGGAAGAGACAACAA----------------CAACAACGACC--------AAGAA------------------------------------------------------------------------------------------------------------------------------------ACCAGAGCC------------------------------------------------------------------------------------AACAACCATGGTGGCACCACGA------A------CAACA---AA--------------AACA------------------------TCAGCA----------AC---CGAAGC---GGCAGCAGCAGCA--------------GCA---------GCAGCAGCAACTAGCA---CAACAACAGCAGCAACTTCCGCT---------------------G--------------CCACAACAAC------------------------------A----------------------ACAACA--ACGAGC----------------------------------------AC------------------------------------AGCAG--CAGCAGCAGCGACAG---CGACAACAACTAGCCATGCCACGCCCAC----G-----G---A----------------------------------------CAAGAG-------------------------------------------------------------------------------------------------CAA---CAGC---AA---------------------------------------------------------CAA---CA-----TGGCACATCCCATACATCCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAACTTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCA--------------GCA---------GCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000000100000
droSec2
AAATAATTGGCTTATTTTCAGTACAAATACAAAGCAC-------AAAAAAAAACA---------ACAAAAA-A-----------------------------TCACAAAA--------------------------AAATAAAACGAAACGAGAGCATATA---ACATAAA----------------------------------------------------------------AAC--------CCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------CAAAAACGATC------GGCTCAG--------------------------------------------------------------------------------------------------------------------------CA------------------------------GAGCCA--ACG-AA----------------------------------------AA------------------------------------GCAAA--CAGCAATAGCAGCAG---GAGCAGAGGATG-------------------------C-------------------------------------------------ACCACTGATCCCGGAGAGCTCGAGACATGAGAAGCGGAA------------------------------------------------------------CA---------------------CCGAGCAGCCACCA---AGCATCGA-CTTA--------------TG-----TAGCGGTCCATGAC-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG-------------------------C-------------------------------------------------ACCACTGATCCCGGAGAGCTC.......................................................................................................................................................................................2511.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAATAGCAGCAG---GAGCA..............................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCAGCAG---GAGCAGAGGATG-------------------------C-------------------------------------------------ACCACT......................................................................................................................................................................................................2811.0010100
droYak3
AGCAAACCAAGCAAGA---------A-----AAACAAAAACCAAATCC------A---AAAAAC------A-GAAATAGAAACA-------------------------------------GAAACAGAA---ACCTAA---AACT-----TTAGCAAACA---ACAAAAAACACCACAA----------------CAACCACATCAATAA-----------------------------------------------------------------------------CAG---A-----------------------------------------------------------------------------------------------------------------------------------G-------------------------------C---------------------------------ATTTTGTACA-----------------------ACAAGCACAG----CGAAAGCT---------------------------AGCAAAGTCCC--ACCA----------------------------------------TTATCATCATC---------------AACAACAAT-----------------------AA---TAACA----------------------ACAACAACAACAACA-------------------------------------------G----------------------------------------------------------------------------------------------------CAG---CAAC--------------------------------------------------------------AAA---AAC-----TC-----------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----------------------ACAACAACAACAACA-------------------------------------------G----------------------------------------------------------------------------------------------------CAG---CAA................................................................................................24170.06100000010000
droEre2
ACAACAACAACAACA----------------ACACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------CATCATCATCAACAACAACAAGCAAACAGAC-----AACAAG--------CGAAAGCAACACCGAGTGCGTTGGC-TCACCAAG---------------------------CAAC-CACAC---------ACA--------------------------A-----------------TCACACCA--AC---AACAGC---------AACAACAACA----------------------------------------------------------------------------------------------------------------GCTGCAAC--ACAAC--------------AAC----------------------ACG-----AG---------C-A------------------------------GC------------------------------------AACAA--------------------------CAGCAATTGCCACCACAGTCAC----C-----A---A----------------------------------------CAGCAG-------------------------------------------------------------------------------------------------CAG---CAAC---A--------------------------------------------------------------ACAACACATGAG-----------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 03:20 AM