ID:

dwi_211

 Coordinate:

scf2_1100000000108:16438-16597 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.7 -4.5 -4.4 -4.4

Flybase annnotation

CDS [Dwil\GK22464-cds]; exon [dwil_GLEANR_568:2]; exon [dwil_GLEANR_568:1]; CDS [Dwil\GK22464-cds]; intron [Dwil\GK22464-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACCCACGGCCCATACGAGGCCACTGATCTTTTAAGGGGGACCATTTCTTGGTGGGTGCGCCTGCCCAACGTCCCCCTCCCTTCTAAAAAGTGCACTTCGCACCGATACTCGGCAGGAATTATATAAAACATTGTATCTTTGCTTTAATCATAGCACTTTTGTAAACCACTCAGAATTCAGGGTAGTTTTAACACACTTTATATTTCACAGTATGTCACAGCCAGGAGAAGACGACGGCGATCGCGAAGCTGACATAGCCC
***************************************************************************************************************........................((..((((........)))).........................))****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body
.......................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCCA..................................... 24 0 3 2.33 7 7 0 0
..............................................................................................................................................................TTGTAAACCACTCAGAATTCAGGG.............................................................................. 24 0 1 2.00 2 2 0 0
.......................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCC...................................... 23 0 4 2.00 8 8 0 0
.......................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCCAGG................................... 26 0 3 1.33 4 2 2 0
.......................TGATCTTTTAAGGGGGACCATTT...................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0
...........................................................................................................................................................CTTTTGTAAACCACTCAGAATTCAGGG.............................................................................. 27 0 1 1.00 1 1 0 0
..........................................................................................................................................................ACTTTTGTAAACCACTCAGAATTCAGGG.............................................................................. 28 0 1 1.00 1 1 0 0
.........................................................................................................................................................CACTTTTGTAAACCACTCAGAAT.................................................................................... 23 0 1 1.00 1 1 0 0
...............................................................................................................GCAGGAATTATATAAAACATTGTATCTT......................................................................................................................... 28 0 1 1.00 1 1 0 0
................................................................................................................................................................GTAAACCACTCAGAATTCAGGGT............................................................................. 23 0 1 1.00 1 1 0 0
....................CACTGATCTTTTAAGGGGGACCATT....................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0
....................................................................................................................................................................ACCACTCAGAATTCAGGGTAGTT......................................................................... 23 0 1 1.00 1 1 0 0
...........................................................................................................................................................CTTTTGTAAACCACTCAGAATTCA................................................................................. 24 0 1 1.00 1 1 0 0
..............................................................................CCTTCTAAAAAGTGCACTTCGCACCG............................................................................................................................................................ 26 0 1 1.00 1 1 0 0
...............................................................................................................................................................TGTAAACCACTCAGAATTCAGGGTAG........................................................................... 26 0 1 1.00 1 1 0 0
..........................................................................................TGCACTTCGCACCGATACTCGGCA.................................................................................................................................................. 24 0 1 1.00 1 1 0 0
...........................................................................................................CTCGGCAGGAATTATATAAAACATT................................................................................................................................ 25 0 1 1.00 1 1 0 0
...................................................................................................................GAATTATATAAAACATTGTATCT.......................................................................................................................... 23 0 1 1.00 1 1 0 0
................................................................................................................CAGGAATTATATAAAACATTGTATCT.......................................................................................................................... 26 0 1 1.00 1 1 0 0
..................GCCACTGATCTTTTAAGGGGG............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0
........................................................................................AGTGCACTTCGCACCGATACTCGGCA.................................................................................................................................................. 26 0 1 1.00 1 1 0 0
..........................................................................................................................................................ACTTTTGTAAACCACTCAGAATTCAG................................................................................ 26 0 1 1.00 1 1 0 0
.......................TGATCTTTTAAGGGGGACCATTTCT.................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0
.......................TGATCTTTTAAGGGGGACCATTTC..................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0
.........................................................................................................................................................CACTTTTGTAAACCACTCAGAATTC.................................................................................. 25 0 1 1.00 1 1 0 0
.............................................................................................................................AAACATTGTATCTTTGCTTTAATCATAG........................................................................................................... 28 0 1 1.00 1 1 0 0
.......................................................................................................................................................................................................ATATTTCACAGTATGTCACAGC....................................... 22 0 8 0.75 6 6 0 0
..........................................................................................................................................................................................................TTTCACAGTATGTCACAGCCAGG................................... 23 0 3 0.67 2 2 0 0
............................................TTCTTGGTGGCTGCGCGTG..................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0
............................................................................................................................................................................................................................................GCGATCGCGAAGCTGACATAG... 21 0 2 0.50 1 1 0 0
.....................................................................................................................................................................................................................................GAGGACGGCGATCGCGAAGCTGACAA..... 26 2 2 0.50 1 1 0 0
...............................................................................................................................................................................................................CAGTATGTCACAGCCAGGAGAAG.............................. 23 0 2 0.50 1 1 0 0
.............................................................................................................................................................................................................................................CGATCGCGAAGCTGACATAGCCC 23 0 2 0.50 1 1 0 0
............................................................................................................................................................................................................................................GCGATCGCGAAGCTGACATAGC.. 22 0 2 0.50 1 1 0 0
...........................................................................................................................................................................................................TTCACAGTATGTCACAGCCAGG................................... 22 0 3 0.33 1 1 0 0
.............................................................................................................................................................................................................................CAGGAGAAGACGACGGCGATCG................. 22 0 3 0.33 1 1 0 0
..........................................................................................................................................................................................................TTTCACAGTATGTCACAGCCAGGA.................................. 24 0 3 0.33 1 0 1 0
.......................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCCAGGA.................................. 27 0 3 0.33 1 1 0 0
..........................................................................................................................................................................................................TTTCACAGTATGTCACAGCC...................................... 20 0 4 0.25 1 1 0 0
........................GATTTTTTTAGGGGGACC.......................................................................................................................................................................................................................... 18 2 16 0.25 4 0 4 0
...........................................................................................................................................................................................................TTCACAGTATGACACAGCCAGG................................... 22 1 4 0.25 1 1 0 0
......................................................................................................................................................................................................TATATTTCACAGTATGTCACAG........................................ 22 0 9 0.22 2 2 0 0
........................GATTTTTTTAGGGGGACCA......................................................................................................................................................................................................................... 19 2 10 0.20 2 0 2 0
.......................................................TGCGCCTGCCCAACGTCCCCCTCCC.................................................................................................................................................................................... 25 0 14 0.14 2 2 0 0
.......................................................TGCGCCTGCCCAACGTCCCCCTCC..................................................................................................................................................................................... 24 0 14 0.14 2 2 0 0
........................................................................................................................................................................................................TATTTCACAGTATGTCACAGC....................................... 21 0 8 0.13 1 1 0 0
.......................................................................................................................................................................................................ATATTTCACAGTATGTCACA......................................... 20 0 9 0.11 1 0 1 0
.......................................................................................................................................................................................................ATATTTCACAGTATGTCACAG........................................ 21 0 9 0.11 1 1 0 0
.......................................................TGCGCCTGCCCAACGTCCCCCTCCCTTC................................................................................................................................................................................. 28 0 14 0.07 1 1 0 0
.......................................................TGCGCCTGCCCAACGTCCCCCTCCCT................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0
.........................................................CGCCTGCCCAACGTCCCCCTC...................................................................................................................................................................................... 21 0 17 0.06 1 1 0 0
.............................................................TGCCCAACGTCCCCCTCCCTT.................................................................................................................................................................................. 21 0 17 0.06 1 0 1 0
.........................................................CGCCTGCCCAACGTCCCCCTCCC.................................................................................................................................................................................... 23 0 17 0.06 1 1 0 0
...........ATACAAGGCTACTGATCCT...................................................................................................................................................................................................................................... 19 3 17 0.06 1 1 0 0
.........................................................................................................................................................................TCAGAATTCAGGGTAGTTTTAACA................................................................... 24 0 18 0.06 1 1 0 0
..................................................................................................................................................................................................................TATGTCAAAGCTAGGATAAGA............................. 21 3 19 0.05 1 0 0 1
...................................................................................TAAGAACTTCACTTCGCACC............................................................................................................................................................. 20 3 19 0.05 1 1 0 0
................................................TGGTGGGTGCGCCTGCCCAACGT............................................................................................................................................................................................. 23 0 20 0.05 1 0 1 0
...............................................................................................................................................TTAATCATAGCACTTTTGTAAA............................................................................................... 22 0 20 0.05 1 1 0 0
...................................................TGGGTGCGCCTGCCCAACGTCCC.......................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0
..........CATACAAGGCTACTGATCC....................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0
..............................................................................................................................................TTTAATCATAGCACTTTTGTAAA............................................................................................... 23 0 20 0.05 1 1 0 0
............TACAAGGCTACTGATCCT...................................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0

Anti-sense strand reads

TGGGTGCCGGGTATGCTCCGGTGACTAGAAAATTCCCCCTGGTAAAGAACCACCCACGCGGACGGGTTGCAGGGGGAGGGAAGATTTTTCACGTGAAGCGTGGCTATGAGCCGTCCTTAATATATTTTGTAACATAGAAACGAAATTAGTATCGTGAAAACATTTGGTGAGTCTTAAGTCCCATCAAAATTGTGTGAAATATAAAGTGTCATACAGTGTCGGTCCTCTTCTGCTGCCGCTAGCGCTTCGACTGTATCGGG
******************************************************************************........................((..((((........)))).........................))*************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body		 V119
head
 M020
head
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTTAAGT................................................................................. 27 0 1 579.00 579 479 94 5 1 0
.....................................................................................................GGCTATGAGCCGTCCTTAATATAT....................................................................................................................................... 24 0 1 191.00 191 165 24 2 0 0
........GGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 25 0 1 183.00 183 140 39 4 0 0
.....................................................................................................GGCTATGAGCCGTCCTTAATATATT...................................................................................................................................... 25 0 1 172.00 172 161 9 0 2 0
.......CGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 26 0 1 138.00 138 101 34 0 2 1
...................................................................................................GTGGCTATGAGCCGTCCTTAATATAT....................................................................................................................................... 26 0 1 95.00 95 10 85 0 0 0
.......................................................................................................................................................................................................................................GCTGCCGCTAGCGCTTCGACTGTAT.... 25 0 1 50.00 50 35 12 1 0 2
.......................................................................GGGGGAGGGAAGATTTTTCACGT...................................................................................................................................................................... 23 0 1 43.00 43 13 30 0 0 0
.............................................................................................................................TTTGTAACATAGAAACGAAATTAGTAT............................................................................................................ 27 0 1 42.00 42 37 5 0 0 0
.........GGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 24 0 1 40.00 40 26 14 0 0 0
............................................................................................................................................................................................................................GGTCCTCTTCTGCTGCCGCTAGCGCT.............. 26 0 1 39.00 39 9 28 2 0 0
......................................................................AGGGGGAGGGAAGATTTTTCACGT...................................................................................................................................................................... 24 0 1 35.00 35 8 27 0 0 0
.......CGGGTATGCTCCGGTGACTAGAAAA.................................................................................................................................................................................................................................... 25 0 1 30.00 30 24 4 0 0 2
.........................................................................................CACGTGAAGCGTGGCTATGAGCCGT.................................................................................................................................................. 25 0 1 29.00 29 27 2 0 0 0
...........................................................................................................................................................GAAAACATTTGGTGAGTCTTAAGT................................................................................. 24 0 1 28.00 28 6 22 0 0 0
......................................................................................................................................................ATCGTGAAAACATTTGGTGAGTCTT..................................................................................... 25 0 1 27.00 27 18 9 0 0 0
.....GCCGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 28 0 1 27.00 27 16 11 0 0 0
.......CGGGTATGCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 27 0 1 26.00 26 16 9 0 1 0
........GGGTATGCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 26 0 1 26.00 26 19 7 0 0 0
.........................................................................................................................................................GTGAAAACATTTGGTGAGTCTTAAGT................................................................................. 26 0 1 23.00 23 10 13 0 0 0
........................................................................................TCACGTGAAGCGTGGCTATGAGCCGT.................................................................................................................................................. 26 0 1 23.00 23 19 3 1 0 0
.........GGTATGCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 25 0 1 21.00 21 14 7 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTTAAG.................................................................................. 26 0 1 19.00 19 11 8 0 0 0
...........................................................................................................GAGCCGTCCTTAATATATTTTGTAACAT............................................................................................................................. 28 0 1 19.00 19 4 15 0 0 0
.......................................................................................TTCACGTGAAGCGTGGCTATGAGCCGT.................................................................................................................................................. 27 0 1 18.00 18 16 2 0 0 0
...........................................................................................CGTGAAGCGTGGCTATGAGCCGTCCT............................................................................................................................................... 26 0 1 18.00 18 16 2 0 0 0
..............................................................................................................................TTGTAACATAGAAACGAAATTAGTAT............................................................................................................ 26 0 1 17.00 17 15 1 1 0 0
........................................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTGT................................................... 25 0 9 16.33 147 39 108 0 0 0
.....................................................................................................GGCTATGAGCCGTCCTTAATATATTT..................................................................................................................................... 26 0 1 16.00 16 14 2 0 0 0
...............................................................................................................................TGTAACATAGAAACGAAATTAGTAT............................................................................................................ 25 0 1 16.00 16 14 1 1 0 0
...................................................................TGCAGGGGGAGGGAAGATTTTTCACGT...................................................................................................................................................................... 27 0 1 16.00 16 0 16 0 0 0
.............................................................................................................................TTTGTAACATAGAAACGAAATTAGT.............................................................................................................. 25 0 1 15.00 15 11 4 0 0 0
........................................................................GGGGAGGGAAGATTTTTCACGT...................................................................................................................................................................... 22 0 1 14.00 14 5 9 0 0 0
....................................................................GCAGGGGGAGGGAAGATTTTTCACGT...................................................................................................................................................................... 26 0 1 14.00 14 1 13 0 0 0
........GGGTATGCTCCGGTGACTAGAAAA.................................................................................................................................................................................................................................... 24 0 1 13.00 13 9 4 0 0 0
....................................................................................................TGGCTATGAGCCGTCCTTAATATAT....................................................................................................................................... 25 0 1 13.00 13 0 13 0 0 0
......................................................................................................................................................................................................................................TGCTGCCGCTAGCGCTTCGACTGTAT.... 26 0 1 13.00 13 2 11 0 0 0
.............................................................................................................................................................................................................................GTCCTCTTCTGCTGCCGCTAGCGCT.............. 25 0 2 12.50 25 4 21 0 0 0
.......................................................................................................................................................TCGTGAAAACATTTGGTGAGTCTTAAGT................................................................................. 28 0 1 12.00 12 0 12 0 0 0
....TGCCGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 29 0 1 11.00 11 5 6 0 0 0
.........................................................................GGGAGGGAAGATTTTTCACGT...................................................................................................................................................................... 21 0 1 11.00 11 8 3 0 0 0
.....................................................................................................GGCTATGAGCCGTCCTTAATATATTTT.................................................................................................................................... 27 0 1 9.00 9 6 3 0 0 0
.....................................................................................................................................................................................................................................CTGCTGCCGCTAGCGCTTCGACTGT...... 25 0 1 9.00 9 3 5 0 1 0
................................................................................................AGCGTGGCTATGAGCCGTCCTTAAT........................................................................................................................................... 25 0 1 8.00 8 1 7 0 0 0
.......................................................................................................................................................TCGTGAAAACATTTGGTGAGTCTT..................................................................................... 24 0 1 8.00 8 4 4 0 0 0
...................................................................................................GTGGCTATGAGCCGTCCTTAATATA........................................................................................................................................ 25 0 1 8.00 8 0 8 0 0 0
.........................................GTAAAGAACCACCCACGCGGACGGGT................................................................................................................................................................................................. 26 0 1 8.00 8 1 7 0 0 0
..........................................................................................................................................................TGAAAACATTTGGTGAGTCTTAAGT................................................................................. 25 0 1 8.00 8 2 6 0 0 0
..........................................................................GGAGGGAAGATTTTTCACGTGAAGC................................................................................................................................................................. 25 0 1 7.00 7 1 6 0 0 0
........................................................................................TCACGTGAAGCGTGGCTATGAGCCGTCCT............................................................................................................................................... 29 0 1 7.00 7 5 2 0 0 0
.....................................................................CAGGGGGAGGGAAGATTTTTCACGT...................................................................................................................................................................... 25 0 1 7.00 7 0 7 0 0 0
...........................................................................................CGTGAAGCGTGGCTATGAGCCGT.................................................................................................................................................. 23 0 1 6.00 6 6 0 0 0 0
....................................................................................................................................................................................................................................TCTGCTGCCGCTAGCGCTTCGACTGT...... 26 0 1 6.00 6 2 4 0 0 0
...................................................................................................GTGGCTATGAGCCGTCCTTAATAT......................................................................................................................................... 24 0 1 6.00 6 2 4 0 0 0
...............................................................................................................................................................................................................GTCATACAGTGTCGGTCCTCTTCTGCT.......................... 27 0 2 6.00 12 2 10 0 0 0
.............................................................................................................................................................................................................................GTCCTCTTCTGCTGCCGCTAGCGCTT............. 26 0 1 6.00 6 1 5 0 0 0
......CCGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 27 0 1 6.00 6 4 1 0 1 0
..........................................................................GGAGGGAAGATTTTTCACGT...................................................................................................................................................................... 20 0 1 5.00 5 4 1 0 0 0
............................................................................................................................................................................................................................GGTCCTCTTCTGCTGCCGCTAGCGCTT............. 27 0 1 5.00 5 3 2 0 0 0
......................................................................................................................................................ATCGTGAAAACATTTGGTGAGTCT...................................................................................... 24 0 1 5.00 5 2 3 0 0 0
.......................................................................................................................................................................................................................................GCTGCCGCTAGCGCTTCGACTGT...... 23 0 1 5.00 5 4 1 0 0 0
.............................................................................GGGAAGATTTTTCACGTGAAGCGTGGCT........................................................................................................................................................... 28 0 1 5.00 5 5 0 0 0 0
................................................................................................AGCGTGGCTATGAGCCGTCCTTAATAT......................................................................................................................................... 27 0 1 5.00 5 1 4 0 0 0
.....GCCGGGTATGCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 29 0 1 5.00 5 3 1 0 1 0
......................................CTGGTAAAGAACCACCCACGCGGACGGGT................................................................................................................................................................................................. 29 0 1 5.00 5 5 0 0 0 0
....................................................................................................................................................................TGGTGAGTCTTAAGTCCCATCAAAAT...................................................................... 26 0 1 5.00 5 1 4 0 0 0
............................................................................................................................................................................................................................GGTCCTCTTCTGCTGCCGCTAGCGC............... 25 0 1 5.00 5 0 5 0 0 0
......TCGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 27 1 1 4.00 4 3 1 0 0 0
.....................................................................................................GGCTATGAGCCGTCCTTAATAT......................................................................................................................................... 22 0 1 4.00 4 2 2 0 0 0
........................................GGTAAAGAACCACCCACGCGGACGGGT................................................................................................................................................................................................. 27 0 1 4.00 4 2 2 0 0 0
.....GCCGGGTATGCTCCGGTGACTAGAAAA.................................................................................................................................................................................................................................... 27 0 1 4.00 4 3 1 0 0 0
......................................................................................................................................................................................................................................TGCTGCCGCTAGCGCTTCGACTGT...... 24 0 1 4.00 4 1 3 0 0 0
...........................................................................................................................................................GAAAACATTTGGTGAGTCTTAAGTCCCAT............................................................................ 29 0 1 4.00 4 0 4 0 0 0
............................................................................AGGGAAGATTTTTCACGTGAAGCGT............................................................................................................................................................... 25 0 1 4.00 4 4 0 0 0 0
...................................................................................................................................................AGTATCGTGAAAACATTTGGTGAGTCTT..................................................................................... 28 0 1 4.00 4 1 3 0 0 0
..................................................................................................................................................TAGTATCGTGAAAACATTTGGTGAGTCT...................................................................................... 28 0 1 4.00 4 0 4 0 0 0
...........................................................................................................................................................................................................................CGGTCCTCTTCTGCTGCCGCTAGCGCT.............. 27 0 1 4.00 4 1 3 0 0 0
..............................................................................................................................................AAATTAGTATCGTGAAAACATTTGGT............................................................................................ 26 0 1 4.00 4 3 1 0 0 0
.....................................................................................................................................................................................................................................CTGCTGCCGCTAGCGCTTCGACTGTAT.... 27 0 1 4.00 4 2 2 0 0 0
........................................................................................................................................................................................................ATAAAGTGTCATACAGTGTCGGTCCTCT................................ 28 0 2 3.50 7 0 4 0 0 3
...........................................................................................................................................................GAAAACATTTGGTGAGTCTTAAGTCC............................................................................... 26 0 1 3.00 3 0 2 0 0 1
.......................................................................................................................................................TCGTGAAAACATTTGGTGAGTCT...................................................................................... 23 0 1 3.00 3 2 1 0 0 0
..........GTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 23 0 1 3.00 3 0 2 1 0 0
......................................................................................................GCTATGAGCCGTCCTTAATATAT....................................................................................................................................... 23 0 1 3.00 3 1 2 0 0 0
........GGGTATGCTCCGGTGACTAGAAA..................................................................................................................................................................................................................................... 23 0 1 3.00 3 0 3 0 0 0
..............................................................................................GAAGCGTGGCTATGAGCCGTCCT............................................................................................................................................... 23 0 1 3.00 3 0 3 0 0 0
...........................................................................................................................................................GAAAACATTTGGTGAGTCTTAAG.................................................................................. 23 0 1 3.00 3 0 3 0 0 0
...........................................................................GAGGGAAGATTTTTCACGTGAAGC................................................................................................................................................................. 24 0 1 3.00 3 3 0 0 0 0
............................................................................................................AGCCGTCCTTAATATATTTTGTAACAT............................................................................................................................. 27 0 1 3.00 3 0 3 0 0 0
.........GGTATGCTCCGGTGACTAGAAAA.................................................................................................................................................................................................................................... 23 0 1 3.00 3 1 2 0 0 0
...................................................................................................GTGGCTATGAGCCGGCCTTAATATAT....................................................................................................................................... 26 1 1 3.00 3 0 3 0 0 0
.......................................................................................................................................................................................................................GTGTCGGTCCTCTTCTGCTGCCGCT.................... 25 0 2 3.00 6 1 5 0 0 0
........................................................................................................TATGAGCCGTCCTTAATATATTTTGT.................................................................................................................................. 26 0 1 3.00 3 2 1 0 0 0
....................................................................................................................................................................................................................................TCTGCTGCCGCTAGCGCTTCGACTGTAT.... 28 0 1 3.00 3 0 3 0 0 0
..................................................................................................CGTGGCTATGAGCCGTCCTTAATAT......................................................................................................................................... 25 0 1 3.00 3 0 3 0 0 0
........GGGTATGCTCCGGTGACTA......................................................................................................................................................................................................................................... 19 0 1 3.00 3 2 1 0 0 0
........................................GGTAAAGAACCACCCACGCGGACGGGTT................................................................................................................................................................................................ 28 0 1 3.00 3 1 2 0 0 0
...................................................................................................................................................................................................................................TTCTGCTGCCGCTAGCGCTTCGACT........ 25 0 1 3.00 3 0 3 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTT..................................................................................... 23 0 1 3.00 3 3 0 0 0 0
...................................................................................................GTGGCTATGAGCCGTCCTTAATATATT...................................................................................................................................... 27 0 1 3.00 3 1 2 0 0 0
......................................................................................................................................................ATCGTGAAAACATTTGGTGAGTCTTAAGT................................................................................. 29 0 1 3.00 3 0 2 1 0 0
................................................................................................................................GTAACATAGAAACGAAATTAGTAT............................................................................................................ 24 0 1 3.00 3 3 0 0 0 0
.................................................................................................................................................................................................................CATACAGTGTCGGTCCTCTTCTGCT.......................... 25 0 2 2.50 5 0 5 0 0 0
...................................................................................................................................................AGTATCGTGAAAACATTTGGTGAGTCT...................................................................................... 27 0 1 2.00 2 0 2 0 0 0
......................................................................................................................................................................................................................AGTGTCGGTCCTCTTCTGCTGCCGCT.................... 26 0 2 2.00 4 1 3 0 0 0
........................................................................................................................................................CTTGAAAACATTTGGTGAGTCTTAAGT................................................................................. 27 1 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................AAAGTGTCATACAGTGTCGGTCCTCTTCT............................. 29 0 2 2.00 4 0 4 0 0 0
........................................................................................................................................................CGTGAAAACGTTTGGTGAGTCTTAAGT................................................................................. 27 1 1 2.00 2 1 1 0 0 0
.................................................................................................GCGTGGCTATGAGCCGTCCTTAATAT......................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0
................................................................................................................................GTAACATAGAAACGAAATTAGTATCGT......................................................................................................... 27 0 1 2.00 2 0 2 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTATTAAGT................................................................................. 27 1 1 2.00 2 2 0 0 0 0
................................................................................................................................GTAACATAGAAACGAAATTAGT.............................................................................................................. 22 0 1 2.00 2 1 1 0 0 0
......................................................................................................................................................ATCGTGAAAACATTTGGTGAGTCTTAAG.................................................................................. 28 0 1 2.00 2 0 2 0 0 0
...................GGTGACTAGAAAATTCCCCCTGGT......................................................................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0
...........................................................................................................................................................................................................................CGGTCCTCTTCTGCTGCCGCTAGCGC............... 26 0 1 2.00 2 1 1 0 0 0
............................................................................AGGGAAGATTTTTCACGTGAAGC................................................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0
.........................................................................................CACGTGAAGCGTGGCTATGAGCCGTCCT............................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0
........................................................................................................................................................CGCGAAAACATTTGGTGAGTCTTAAGT................................................................................. 27 1 1 2.00 2 2 0 0 0 0
.......CGGGTATGCTCCGGTGACTAGAAA..................................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
......TCGGGTATGCTCCGGTGACTAGAAAA.................................................................................................................................................................................................................................... 26 1 1 2.00 2 2 0 0 0 0
...........TATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTTAATT................................................................................. 27 1 1 2.00 2 1 1 0 0 0
.........................................................................................................................................................................................................................GTCGGTCCTCTTCTGCTGCCGCTAGCGCT.............. 29 0 1 2.00 2 0 2 0 0 0
.....................................................................................................................................................................GGTGAGTCTTAAGTCCCATCAAAAT...................................................................... 25 0 1 2.00 2 1 1 0 0 0
..........................................................................GGAGGGAAGATTTTTCACGTGAAGCG................................................................................................................................................................ 26 0 1 2.00 2 0 2 0 0 0
.................................................................................................GCGTGGCTATGAGCCGTCCTTAAT........................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0
........TGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 25 1 1 2.00 2 2 0 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGCGAGTCTTAAGT................................................................................. 27 1 1 2.00 2 2 0 0 0 0
...................................................................TGCAGGGGGAGGGAAGATTTTT........................................................................................................................................................................... 22 0 1 2.00 2 1 1 0 0 0
......................................................................AGGGGGAGGGAAGATTTTTCACG....................................................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0
.............................................................................................................................................GAAATTAGTATCGTGAAAACATTTGGT............................................................................................ 27 0 1 2.00 2 1 1 0 0 0
.........................................................................................................................ATATTTTGTAACATAGAAACGAAAT.................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0
....................................................................................................................................................GTATCGTGAAAACATTTGGTGAGTCTT..................................................................................... 27 0 1 2.00 2 1 1 0 0 0
........................................................................................................................................................CGTGAAAACATTCGGTGAGTCTTAAGT................................................................................. 27 1 1 2.00 2 2 0 0 0 0
...........................................AAAGAACCACCCACGCGGACGGGTTGCA............................................................................................................................................................................................. 28 0 1 2.00 2 0 2 0 0 0
.............................................................................................................................................................................................................................GTCCTCTTCTGCTGCCGCTAGCGC............... 24 0 2 2.00 4 0 4 0 0 0
..............................................................................GGAAGATTTTTCACGTGAAGCGTGGCT........................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTTAGT.................................................................................. 26 2 1 2.00 2 2 0 0 0 0
......................................................................................................GCTATGAGCCGTCCTTAATATATT...................................................................................................................................... 24 0 1 2.00 2 1 1 0 0 0
.......................................................................................................................................................................................................................................GCTGCCGCTAGCGCTTCGACT........ 21 0 1 2.00 2 2 0 0 0 0
........GGGTATGCTCCGGAGACTAGAAAAT................................................................................................................................................................................................................................... 25 1 1 2.00 2 1 1 0 0 0
....................................................................................................TGGCTATGAGCCGTCCTTAATAT......................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
........................................................................................................................................................CGGGAAAACATTTGGTGAGTCTTAAGT................................................................................. 27 1 1 2.00 2 2 0 0 0 0
....................................................................................................................................................................................................................................TCTGCTGCCGCTAGCGCTTCGAC......... 23 0 1 2.00 2 0 2 0 0 0
.................................................................GTTGCAGGGGGAGGGAAGATTTT............................................................................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0
.................................................................GTTGCAGGGGGAGGGAAGATTTTT........................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0
.........................................................................................................ATGAGCCGTCCTTAATATATTTTGT.................................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0
.......................................................................................................................................AGAAACGAAATTAGTATCGTGAAAACAT................................................................................................. 28 0 1 2.00 2 0 2 0 0 0
..........................AGAAAATTCCCCCTGGTAAAGAACCAC............................................................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0
...........................................................................................................GAGCCGTCCTTAATATATTTTGTAACA.............................................................................................................................. 27 0 1 2.00 2 0 2 0 0 0
............................................................................................GTGAAGCGTGGCTATGAGCCGTCCT............................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
.........................................................................................................ATGAGCCGTCCTTAATATAT....................................................................................................................................... 20 0 1 2.00 2 0 2 0 0 0
.....................................................................................................GGCTACGAGCCGTCCTTAATATAT....................................................................................................................................... 24 1 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................................TGTGTGAAATATAAAGTGTCATACAGT........................................... 27 0 3 2.00 6 4 2 0 0 0
......ACGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 27 1 1 2.00 2 2 0 0 0 0
.......CGGGTATGCTCCGGTGACTAGAA...................................................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................................................................................................ACAGTGTCGGTCCTCTTCTGCTGCCGCT.................... 28 0 2 1.50 3 0 3 0 0 0
.................................................................................................................................................................................................................CATACAGTGTCGGTCCTCTTCT............................. 22 0 2 1.50 3 1 2 0 0 0
...............................................................................................................................................................................................................GTCATACAGTGTCGGTCCTCTTCTGC........................... 26 0 2 1.50 3 0 3 0 0 0
........................................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTGTCAT................................................ 28 0 3 1.33 4 2 2 0 0 0
..................................................................................................................................................TAGTATCGTGAAAACATTTGGTGAGTCTT..................................................................................... 29 0 1 1.00 1 0 1 0 0 0
.......................................................................GGGGGAGGGAAGGTTTTTCACGT...................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
............ATGCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................ATCGTGAAAACATTTGGTGAGTATT..................................................................................... 25 1 1 1.00 1 1 0 0 0 0
......................................................................................TTTCACGTGAAGCGTGGCTATGAGCCGT.................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
.....................................................................................................GGCTATGAGCCATCCTTAATATATTT..................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.................................TCCCCCTGGTAAAGAACCACCCACGC......................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................ATCGTGAAAGCATTTGGTGAGTCTT..................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................GTGTCATACAGTGTCGGTCCTCTTCT............................. 26 0 2 1.00 2 0 2 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTTAGTCTTAAGT................................................................................. 27 1 1 1.00 1 1 0 0 0 0
....................................................................GCAGGGGGAGGGAAGATTTTTCACG....................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
..............................................................CGGGTTGCAGGGGGAGGGAAGATTTT............................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
............ATGCTCCGGTGACTAGAAAATTCCC............................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................TAGTATCGTGAAAACATTTGGTGAGT........................................................................................ 26 0 1 1.00 1 0 1 0 0 0
......CCGGGTATGCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................................................AATCTGCTGCCGCTAGCGCTTCGACTGT...... 28 2 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................................TCTTCTGCTGCCGCTAGCGCTTCGAC......... 26 0 1 1.00 1 0 1 0 0 0
.......CGGGTATGCTACGGTGACTAGAAAAT................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.......CGGGTATGCTCCGGAGACTAGAAAAT................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................GTTTCTGCTGCCGCTAGCGCTTCGACT........ 27 2 1 1.00 1 1 0 0 0 0
...........TATGCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGATTCTTAAGT................................................................................. 27 1 1 1.00 1 1 0 0 0 0
............................................................................................................AGCCGTCCTTAATATATTTTGTAACATAG........................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................CGTGAAAACATTTCGTGAGTCTTAAGT................................................................................. 27 1 1 1.00 1 1 0 0 0 0
.....GCCGGGTATGCTCCGGTTACTAGAAAA.................................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................ACAGTGTCGGTCCTCTTCTGCTGCCGC..................... 27 0 2 1.00 2 0 2 0 0 0
..............................................................................................................................TTTGTACATAGAAACGAAATTAGTAT............................................................................................................ 26 3 1 1.00 1 1 0 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTTAAGTCT............................................................................... 29 1 1 1.00 1 1 0 0 0 0
.........................................................................................CACGTGAAGCGTGGCTATCAGCCGT.................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
........................................................................................................TATGAGCCGTCCTTAATATATT...................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
...........................GAAAATTCCCCCTGGTAAAGAACCACC.............................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
.....................................................................................................GGCTATGATCCGTCCTTAATATATT...................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................TCGTGAAAACATTTGGTGAGT........................................................................................ 21 0 1 1.00 1 1 0 0 0 0
................................................................................................AGCGTGGCTATGAACCGTCCTTAAT........................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................................ATGGTCCTCTTCTGCTGCCGCTAGCGCT.............. 28 2 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................CATACAGTGTCGGTCCTCTTCTGC........................... 24 0 2 1.00 2 0 2 0 0 0
...................................................................................................GTGGCTATGAGCCGTCCTTAATATATC...................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................................TTCTGCTGCCGCTAGCGCTTCGAC......... 24 0 1 1.00 1 0 1 0 0 0
.............................................AGAACCACCCACGCGGACGGGTT................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
.........GGTATGCTCCTGTGACTAGAAAAT................................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGGGAGTCTTAAGT................................................................................. 27 1 1 1.00 1 0 1 0 0 0
....................................................................................................TGGCTATGAGCCGTCCTTAATATA........................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0
............ATGCTCCGGTGACTAGAAAATTCCCC.............................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
.......CGGGCATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..............GCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................TGCTATGAGCCTTCCTTAATATATT...................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0
..................................................................................................................CCTTAATATATTTTGTAACATAGAAA........................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.......................................TGGTAAAGAACCACCCACGCGGACGGGT................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTTACGT................................................................................. 27 1 1 1.00 1 1 0 0 0 0
............................................................................................................................TTTTGTAACATAGAAACGAAATTAGT.............................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
......ATGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0
.........GGTATGCTCCGGTGACTCGAAAAT................................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
..........................................................................................ACGTGAAGCGTGGCTATGAGCCGT.................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
...........................................AAAGAACCACCCACGCGGACGGGTTG............................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
........GGGTATTCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
.............................................................................................................GCCGTCCTTAATATATTTTGTAACATA............................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
........GGGTATGCTCCGTTGACTAGAAAA.................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
....................................................................................ATTTTCACGTGAAGCGTGGCTATGAGC..................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................CCTCTTCTGCTGCCGCTAGCGCTTCGACT........ 29 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................TTTGTAACATAGAAACGAAATTAT............................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
............................................................................AGGGAAGATTCTTCACGTGAAGCGT............................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0
.....................................................................................................GGCTATGAGCCGTCCTTCATATATT...................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................GGCTATGAGCCGTCCTTAATATA........................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................TATCGTGAAAACATTTGGTGAGTCT...................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.............TGCTCCGGTGACTAGAAAATTCCCC.............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
.......CGGGTATGCTCCGGTGACTAGACAA.................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................TTTGTAACATAGAAACTAAATTAGT.............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
...........................................AAAGAACCACCCACGCGGACGGGTTGC.............................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
..................................................................................................CGTGGCTATGAGCCGTCCTTAAT........................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
........................................................................................TCACGTGAAGCGTGGCTATGAGCTGT.................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
........GGGTACGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................CGAAAACATTTGGTGAGTCTTAAGT................................................................................. 25 1 1 1.00 1 0 1 0 0 0
.........GGTATGATCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.TGGTGCCGGGTATGCTCCGGTGACTA......................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................ATTTTGTAACATAGAAACGAAATTAGT.............................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
........GGGTATGCTCCGGGGACTAGAAAAT................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................AGTGTCGGTCCTCTTCTGCTGCCGC..................... 25 0 2 1.00 2 0 2 0 0 0
.....................................................................................................GGTTATGAGCCGTCCTTAATATATT...................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.........GGTATGCTCCGGTGACTAGAAA..................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................CTGCTGCCGCTAGCGCTTCGACTG....... 24 0 1 1.00 1 0 1 0 0 0
........GGGTATGCTCCGGTGAATAGAAAAT................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................ATCGTGAAAACATTTGGTGAGCCTT..................................................................................... 25 1 1 1.00 1 0 1 0 0 0
.................................TCCCCCTGGTAAAGAACCACCCACG.......................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................................................CTCTTCTGCTGCCGCTAGCGCTTCG........... 25 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................GAAAACATTTGGTGAGTCTT..................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...................................................................TGCAGGGGGAGGGAAGATTTT............................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................AACATTTGGTGAGTCTTAAGTCCCCT............................................................................ 26 1 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................TCTGCTGCCGCTAGCGCTTCGACT........ 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................AAACGAAATTAGTATCGTGAAAACA.................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
....................................................................................................TGGCTATGAGCCGTCCTTAATATATT...................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
......................................................................................................................AATATATTTTGTAACATAGAAACGAA.................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................GAAAACATTTGGGGAGTCTTAAGT................................................................................. 24 1 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................TGGTGAGTCTTAAGTCCCAT............................................................................ 20 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................CCTCTTCTGCTGCCGCTAGCGCTT............. 24 0 1 1.00 1 0 1 0 0 0
.....................................................................................................GGCTAAGAGCCGTCCTTAATATATT...................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
.....................................................................................................GGCTATGAGCCGTCCGTAATATATTTT.................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
...........................................................................................................GAGCCGTCCTTAATATATTTTGTAA................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
.........CGTATGCTCCGGTGACTAGAAAATT.................................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................CAAAATTGTGTGAAATATAAAGTG.................................................... 24 0 9 1.00 9 0 9 0 0 0
.......................................................................GGGGGAGGGAAGATTTTTCACG....................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
.............................................................................................................GCCGTCCTTAATATATTTTGTAACAT............................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
....................................................................GCAGGGGGAGGGAAGATTTT............................................................................................................................................................................ 20 0 2 1.00 2 1 1 0 0 0
....................................................................................................................................................GTATCGTGAAAACATTTGGTGAGTCTTC.................................................................................... 28 1 1 1.00 1 0 1 0 0 0
.......CGGGTATGCTCCGGTGAATAGAAAAT................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...........................................................................................................GAGCCGTCCTTAATATAT....................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
..........................................................................GGAGGGAAGATTTTTCACGTGAAGCGT............................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.......CGGGTATGCTCCGGTGACTAGAAAT.................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................GGCTGCCGCTAGCGCTTCGACTGTAT.... 26 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................TTTGTAACATAGAAACGAAATTAG............................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.....ATCGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0
................................................................................................AGCGTGGCTATGAGCCGTCCTTTATAT......................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
......CCGGGTATGCTCCGGTGACTAGAAAA.................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................................TCATACAGTGTCGGTCCTCTTCTGCT.......................... 26 0 2 1.00 2 0 2 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTCAAGT................................................................................. 27 1 1 1.00 1 1 0 0 0 0
....TGTCGGGTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
........................................................................GGGGAGTGAAGATTTTTCACGT...................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
........GGTTATGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
....TGCCGGGTATGCTCCGGTGACTAG........................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
........GGGTATGCTCCTGTGACTAGAAAAT................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
..............................................GAACCACCCACGCGGACGGGTTGCA............................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
........GGGTGTGCTCCGGTGACTAGAAAAT................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................................GCTGCCGCAAGCGCTTCGACTGTAT.... 25 1 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................................................CGCTGCCGCTAGCGCTTCGACTGT...... 24 1 1 1.00 1 0 0 1 0 0
..................................................................................................CGTGGCTATGAGCCGTCCTTAATATAT....................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................GAAAACATTTGGTGAGTCTTAAGTA................................................................................ 25 1 1 1.00 1 0 1 0 0 0
.......CGGGTATGCTCCTGTGACTAGAAAA.................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....GCCGGGTATGCTCCGGTGACTAGAAA..................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................CAGTGTCGGTCCTCTTCTGCTGCCGC..................... 26 0 2 1.00 2 0 2 0 0 0
................TCCGGTGACTAGAAAATTCCCCCT............................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0
.........................................................................................................ATGAGCCGTCCTTAATATATTTTG................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................TTGTAACATAGAAACGAAATTAGTA............................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTTAGGT................................................................................. 27 1 1 1.00 1 1 0 0 0 0
.......AGGGTATGCTCCGGTGACTAGAAAA.................................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
......................................................................AGGGGGAGGGAAGATTTTTCACCT...................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................CGAAATTAGTATCGTGAAAACATTTGGT............................................................................................ 28 0 1 1.00 1 0 1 0 0 0
.......................................................................GGGGGAGGGAAGATTTTTCACGTGAAC.................................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0
.......................................................................................TTCACGTGAAGCGCGGCTATGAGCCGT.................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0
.....................................................................................................GGCTATGAGCCGTCTTTAATATATT...................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................CGTGAAAACATTTGGTGAGTCTTA.................................................................................... 24 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................................TCTGCTGCCGCTAGCGCTT............. 19 0 1 1.00 1 0 1 0 0 0
..................................................................TTGCAGGGGGAGGGAAGATTTTT........................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000000108:16388-16647 - dwi_211 ACCCACGGCCCA--TACGAGGCCACTGAT------------------CTTTTAAGGGGGACCATTTCTTGGTGGGTGCGCCTGCCCAACGTCCCCCTCCCTTCTAA------AAAGTGCACTTCGCACCGATACTCGGCAGGAATTATATAAAACATTGTATCTTTGCTTTAATCATAGCACTTTTGTAAACCACTCAGAATTCAGGGTAGTTTTAACACACTTTATATTTCACAGTATGTCACAGCCAGGAGAAGACGACGGCGATCGCGAAGCTGACATAGCCC
dp5 Unknown_singleton_3670:494-605 - GACGACGACCCC-----A------------GCACCA-GGAAAACAGCGAGTTCATGAGGGCCACTTAT-GGT-GGTGCGCTGCCGTAATGTCCTCGCCCCGC--AAGGGGAAACCGC---------GTCCACACTCAGTAAG-A----------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000300893:308-441 - TCCA-CGTCGCCGCCACTAAGCCACGCCCAGATCGAAAGATGGCC--ATGTTCAGAGAGGCCACTTGCTGAAAGGCGCGCCTGTCCAACGCCCCTACCCCCC-TAG------AGGGGAAACATTGGCCCTCTCTTTCGCAGAAA----------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000448641:35414-35455 - G-------------------------------------------------------------------------GTCTGCCTGCCCAACATACCTTTTCGCTGTAA------AAAAGGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778019:13490-13561 + ACCATCG--------AGGAAGCCACGTCT------------------TGAGT-AATGGGGCCACTTGCTGGTAGTCGCGACTACCCAACGTCCCTCCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000297937:73-151 - AGCAACGAACCA-----GGAGCCAATGTT------------------TGAGTCAGTGGGGCCACTTGCTGGAGGGTGCGCCTTCCCAACGTTCCACTTCCCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000412396:18066-18137 + GCCATCG--------AAGAAGCCACGTCC------------------TGAGT-AACGGGGCCACTTGCTGGTAGTCACGACTACCCAACGTCCCTCCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409443:23247-23313 + G-----------------GAGCCAATGTT------------------TGAGTCAGTGGGGCCACTTGCTGGAGGGTGCGCCTTCCCAACGTCCCACTTCCCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_2202:4035-4142 + GACCACGGCGCT----------CGAATCCTGGTCGA-AGGTACCAGGGTG-TCATGGGGGCCACTTGATGCTGGGCGCGCTCAGCCAACGTCCCCAACCCCC--TTGGGGGAAAAGAACACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:22017820-22017915 - ACCTACT-----------------------GGTCAA-GGATATCAGGGTA-TCATGGGGGCCACTTGACGCTGGGTGCGCTCAGCCAACGTCCCCACCCCCG-CTGGGGGGAAAAGAACACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ACCCACGGCCCA--TACGAGGCCACTGAT------------------CTTTTAAGGGGGACCATTTCTTGGTGGGTGCGCCTGCCCAACGTCCCCCTCCCTTCTAA------AAAGTGCACTTCGCACCGATACTCGGCAGGAATTATATAAAACATTGTATCTTTGCTTTAATCATAGCACTTTTGTAAACCACTCAGAATTCAGGGTAGTTTTAACACACTTTATATTTCACAGTATGTCACAGCCAGGAGAAGACGACGGCGATCGCGAAGCTGACATAGCCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCCA.....................................2432.33707000
........................................................................................................................................................................................TTGTAAACCACTCAGAATTCAGGG..............................................................................2412.00202000
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCC......................................2342.00808000
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCCAGG...................................2631.33402020
.........................TGAT------------------CTTTTAAGGGGGACCATTT............................................................................................................................................................................................................................2311.00101000
.....................................................................................................................................................................................CTTTTGTAAACCACTCAGAATTCAGGG..............................................................................2711.00101000
....................................................................................................................................................................................ACTTTTGTAAACCACTCAGAATTCAGGG..............................................................................2811.00101000
...................................................................................................................................................................................CACTTTTGTAAACCACTCAGAAT....................................................................................2311.00101000
.........................................................................................................................................GCAGGAATTATATAAAACATTGTATCTT.........................................................................................................................2811.00101000
..........................................................................................................................................................................................GTAAACCACTCAGAATTCAGGGT.............................................................................2311.00101000
......................CACTGAT------------------CTTTTAAGGGGGACCATT.............................................................................................................................................................................................................................2511.00101000
..............................................................................................................................................................................................ACCACTCAGAATTCAGGGTAGTT.........................................................................2311.00101000
.....................................................................................................................................................................................CTTTTGTAAACCACTCAGAATTCA.................................................................................2411.00101000
..................................................................................................CCTTCTAA------AAAGTGCACTTCGCACCG............................................................................................................................................................2611.00101000
.........................................................................................................................................................................................TGTAAACCACTCAGAATTCAGGGTAG...........................................................................2611.00101000
....................................................................................................................TGCACTTCGCACCGATACTCGGCA..................................................................................................................................................2411.00101000
.....................................................................................................................................CTCGGCAGGAATTATATAAAACATT................................................................................................................................2511.00101000
.............................................................................................................................................GAATTATATAAAACATTGTATCT..........................................................................................................................2311.00101000
..........................................................................................................................................CAGGAATTATATAAAACATTGTATCT..........................................................................................................................2611.00101000
....................GCCACTGAT------------------CTTTTAAGGGGG...................................................................................................................................................................................................................................2111.00100010
..................................................................................................................AGTGCACTTCGCACCGATACTCGGCA..................................................................................................................................................2611.00101000
....................................................................................................................................................................................ACTTTTGTAAACCACTCAGAATTCAG................................................................................2611.00101000
.........................TGAT------------------CTTTTAAGGGGGACCATTTCT..........................................................................................................................................................................................................................2511.00101000
.........................TGAT------------------CTTTTAAGGGGGACCATTTC...........................................................................................................................................................................................................................2411.00101000
...................................................................................................................................................................................CACTTTTGTAAACCACTCAGAATTC..................................................................................2511.00101000
.......................................................................................................................................................AAACATTGTATCTTTGCTTTAATCATAG...........................................................................................................2811.00101000
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGC.......................................2280.75606000
....................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCCAGG...................................2330.67202000
......................................................................................................................................................................................................................................................................GCGATCGCGAAGCTGACATAG...2120.50101000
.........................................................................................................................................................................................................................................CAGTATGTCACAGCCAGGAGAAG..............................2320.50101000
.......................................................................................................................................................................................................................................................................CGATCGCGAAGCTGACATAGCCC2320.50101000
......................................................................................................................................................................................................................................................................GCGATCGCGAAGCTGACATAGC..2220.50101000
.....................................................................................................................................................................................................................................TTCACAGTATGTCACAGCCAGG...................................2230.33101000
.......................................................................................................................................................................................................................................................CAGGAGAAGACGACGGCGATCG.................2230.33101000
....................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCCAGGA..................................2430.33100010
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAGCCAGGA..................................2730.33101000
....................................................................................................................................................................................................................................TTTCACAGTATGTCACAGCC......................................2040.25101000
................................................................................................................................................................................................................................TATATTTCACAGTATGTCACAG........................................2290.22202000
...........................................................................TGCGCCTGCCCAACGTCCCCCTCCC..........................................................................................................................................................................................25140.14202000
...........................................................................TGCGCCTGCCCAACGTCCCCCTCC...........................................................................................................................................................................................24140.14202000
..................................................................................................................................................................................................................................TATTTCACAGTATGTCACAGC.......................................2180.13101000
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACA.........................................2090.11100010
.................................................................................................................................................................................................................................ATATTTCACAGTATGTCACAG........................................2190.11101000
...........................................................................TGCGCCTGCCCAACGTCCCCCTCCCTTC.......................................................................................................................................................................................28140.07101000
...........................................................................TGCGCCTGCCCAACGTCCCCCTCCCT.........................................................................................................................................................................................26140.07101000
.............................................................................CGCCTGCCCAACGTCCCCCTC............................................................................................................................................................................................21170.06101000
.................................................................................TGCCCAACGTCCCCCTCCCTT........................................................................................................................................................................................21170.06100010
.............................................................................CGCCTGCCCAACGTCCCCCTCCC..........................................................................................................................................................................................23170.06101000
...................................................................................................................................................................................................TCAGAATTCAGGGTAGTTTTAACA...................................................................24180.06101000
....................................................................TGGTGGGTGCGCCTGCCCAACGT...................................................................................................................................................................................................23200.05100010
.........................................................................................................................................................................TTAATCATAGCACTTTTGTAAA...............................................................................................22200.05101000
.......................................................................TGGGTGCGCCTGCCCAACGTCCC................................................................................................................................................................................................23200.05100010
........................................................................................................................................................................TTTAATCATAGCACTTTTGTAAA...............................................................................................23200.05101000
dp5
GACGACGACCCC-----A------------GCACCA-GGAAAACAGCGAGTTCATGAGGGCCACTTAT-GGT-GGTGCGCTGCCGTAATGTCCTCGCCCCGC--AAGGGGAAACCGC---------GTCCACACTCAGTAAG-A----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................GAGTTCATGAGGGCCACTTAT-GG.......................................................................................................................................................................................................................23200.801601600000000
...........................................................................TGCGCTGCCGTAATGTCCTCGCCC...........................................................................................................................................................................................2470.5740310000000
...............................................GAGTTCATGAGGGCCACTTAT-G........................................................................................................................................................................................................................22200.4590900000000
...........................................................................................CCTCGCCCCGC--AAGGGGAAACCGC---------................................................................................................................................................................2440.2510100000000
................................................................................TGCCGTAATGTCCTCGCCCCGC--......................................................................................................................................................................................2250.2010100000000
........................................................................................TGTCCTCGCCCCGC--AAGGGGAAAC............................................................................................................................................................................2450.2010100000000
...........................................................................TGCGCTGCCGTAATGTCCTCGC.............................................................................................................................................................................................22110.1820200000000
...........................................................................TGCGCTGCCGTAATGTCCTCGCC............................................................................................................................................................................................23110.1820200000000
...............................................GAGTTCATGAGGGCCACTTAT-GGT-G....................................................................................................................................................................................................................25140.1420200000000
...................................................TCATGAGGGCCACTTAT-GGT-GAC..................................................................................................................................................................................................................23140.1420000000200
............................................................................GCGCTGCCGTAATGTCCTCGCCC...........................................................................................................................................................................................2370.1410100000000
...............................................GAGTTCATGAGGGCCACTTAT-GGT-.....................................................................................................................................................................................................................24170.1220200000000
................................................................................TGCCGTAATGTCCTCGCC............................................................................................................................................................................................18110.0910100000000
...................................................TCATGAGGGCCACTTAT-GGT-GT...................................................................................................................................................................................................................22140.0710000100000
...................................................TCATGAGGGCCACTTAT-GGT-GGTGCG...............................................................................................................................................................................................................26140.0710100000000
....................................................CATGAGGGCCACTTAT-GGT-GGTG.................................................................................................................................................................................................................23140.0710100000000
...................................................TCATGAGGGCCACTTAT-GGT-GG...................................................................................................................................................................................................................22140.0710100000000
GACGACGACCCC-----A------------GCACCA-GGAAAAC..................................................................................................................................................................................................................................................26140.0710100000000
..............................................................ACTTAT-GGT-GGTGCGCTGCC..........................................................................................................................................................................................................20150.0710100000000
.........................................................GGGCCACTTAT-GGT-GGTGCGCTG............................................................................................................................................................................................................23150.0710100000000
GACGACGACCCC-----A------------GCACCA-GGAAA....................................................................................................................................................................................................................................................24150.0710100000000
GACGACGACCCC-----A------------GCACCA-GGAAAA...................................................................................................................................................................................................................................................25150.0710100000000
...............................................GAGTTCATGAGGGCCACTTAT-GT.......................................................................................................................................................................................................................23200.0510100000000
................................................AGTTCATGAGGGCCACTTAT-GG.......................................................................................................................................................................................................................22200.0510100000000
..................................................TTCATGAGGGCCACTTAT-GG.......................................................................................................................................................................................................................20200.0510100000000
................................................AGTTCATGAGGGCCACTTAT-G........................................................................................................................................................................................................................21200.0510100000000
..............................................CGAGTTCATGAGGGCCACTTAT-GG.......................................................................................................................................................................................................................24200.0510100000000
droKik1
TCCA-CGTCGCCGCCACTAAGCCACGCCCAGATCGAAAGATGGCC--ATGTTCAGAGAGGCCACTTGCTGAAAGGCGCGCCTGTCCAACGCCCCTACCCCCC-TAG------AGGGGAAACATTGGCCCTCTCTTTCGCAGAAA----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
G-------------------------------------------------------------------------GTCTGCCTGCCCAACATACCTTTTCGCTGTAA------AAAAGGCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ACCATCG--------AGGAAGCCACGTCT------------------TGAGT-AATGGGGCCACTTGCTGGTAGTCGCGACTACCCAACGTCCCTCCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGCAACGAACCA-----GGAGCCAATGTT------------------TGAGTCAGTGGGGCCACTTGCTGGAGGGTGCGCCTTCCCAACGTTCCACTTCCCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCCATCG--------AAGAAGCCACGTCC------------------TGAGT-AACGGGGCCACTTGCTGGTAGTCACGACTACCCAACGTCCCTCCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
G-----------------GAGCCAATGTT------------------TGAGTCAGTGGGGCCACTTGCTGGAGGGTGCGCCTTCCCAACGTCCCACTTCCCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
GACCACGGCGCT----------CGAATCCTGGTCGA-AGGTACCAGGGTG-TCATGGGGGCCACTTGATGCTGGGCGCGCTCAGCCAACGTCCCCAACCCCC--TTGGGGGAAAAGAACACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
ACCTACT-----------------------GGTCAA-GGATATCAGGGTA-TCATGGGGGCCACTTGACGCTGGGTGCGCTCAGCCAACGTCCCCACCCCCG-CTGGGGGGAAAAGAACACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:02 PM