dwi_2101

exon [dwil_GLEANR_3147:3]; CDS [Dwil\GK20379-cds]; exon [dwil_GLEANR_3147:2]; CDS [Dwil\GK20379-cds]; intron [Dwil\GK20379-in]

##################################################----------------------------------------------------------------------------------------------################################################## ACATACAGAAGAAAACATTTACAAAATGGATGAATTCGTTTCTGATCAAGGTAAGACACAGAGACAGAGAGATAGAGAGATAGAGAGCAAAAGAACTAGTAGAAATTGTAACTTTCTTTCATATTTCTATTCCAATTTATATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA ************************************************............((...(((((((((((((.((...((((...............))))..)).)))))).)))))))..))............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V118 embryo	V117 male body	M020 head	M045 female body	V119 head
.......................................................................................................................................................................ATTCACAGATCTAGCCGATGGCATCAA	27	0	1	8.00	8	5	2	0	1	0
.......................................................................................................................................................................ATTCACAGATCTAGCCGATGGCAT...	24	0	1	7.00	7	5	2	0	0	0
.................................ATTCGTTTCTGATCAAGGC..............................................................................................................................................	19	1	1	5.00	5	2	0	3	0	0
.................TTTACAAAATGGATGAATTC.............................................................................................................................................................	20	0	1	4.00	4	4	0	0	0	0
.......................................................................................................................................................................ATTCACAGATCTAGCCGATGGC.....	22	0	1	4.00	4	4	0	0	0	0
................................AATTCGTTTCTGATCAAGGC..............................................................................................................................................	20	1	1	4.00	4	4	0	0	0	0
.................TTTACAAAATGGATGAATTCGT...........................................................................................................................................................	22	0	1	3.00	3	0	3	0	0	0
.................TTTACAAAATGGATGAATTCGTT..........................................................................................................................................................	23	0	1	2.00	2	1	1	0	0	0
...................TACAAAATGGATGAATTCGTTTCT.......................................................................................................................................................	24	0	1	2.00	2	1	1	0	0	0
.......................................................................................................................................................................ATTCACAGATCTAGCCGATGGCATC..	25	0	1	2.00	2	0	2	0	0	0
..........................................................................................................................................................................CACAGATCTAGCCGATGGCATCAA	24	0	1	2.00	2	2	0	0	0	0
.....................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCAT...	26	0	1	2.00	2	2	0	0	0	0
.....................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCATCA.	28	0	1	2.00	2	0	0	2	0	0
.........................................................................................................................................................................TCACAGATCTAGCCGATGGC.....	20	0	1	2.00	2	2	0	0	0	0
..............................................................................................................................................................CGAAGACCTATTCACAGAT.................	19	0	1	2.00	2	2	0	0	0	0
...................................................................................................................................................AAAATGGAGGTCGAAGACCT...........................	20	0	1	1.00	1	1	0	0	0	0
.................TTTACAAAATGGATGAATT..............................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0
...................TACAAAATGGATGAATTCGTTT.........................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0
.....................................................................................................................................................................CTATTCACAGATCTAGCCGATGGC.....	24	0	1	1.00	1	1	0	0	0	0
.............................ATGAATTCGTTTCTGATCAAGGC..............................................................................................................................................	23	1	1	1.00	1	0	0	1	0	0
..................TTACAAAATGGATGAATTC.............................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0
.........................................................................................................................................................................TCACAGATCTAGCCGATGGCAT...	22	0	1	1.00	1	1	0	0	0	0
...................................................................................................................................................AAAATGGAGGTCGAAGACCTATTCACA....................	27	0	1	1.00	1	1	0	0	0	0
.CATACAGAAGAAAACATTTACAAA.........................................................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0
....................ACAAAATGGATGAATTCGT...........................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0
................................................................................................................................................GCCAAAATGGAGGTCGAAGAC.............................	21	0	1	1.00	1	1	0	0	0	0
..............................................................................................................................................................CGAAGACCTATTCACAGATCTAGCCGA.........	27	0	1	1.00	1	0	1	0	0	0
............................................................................................................................................................GTCGAAGACCTATTCACAGATCTAGCCG..........	28	0	1	1.00	1	0	0	0	1	0
.............................................................................................................................................AAGGCCAAAATGGAGGTCGAAGACCT...........................	26	1	1	1.00	1	1	0	0	0	0
........................AATGGATGAATTCGTTTCTGA.....................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0
.........................ATGGATGAATTCGTTTCT.......................................................................................................................................................	18	0	1	1.00	1	1	0	0	0	0
................ATTTACAAAATGGATGAA................................................................................................................................................................	18	0	1	1.00	1	1	0	0	0	0
........................................................................................................................................TGATCAAGGCCAAAATGGAGGTCGAAGA..............................	28	3	1	1.00	1	0	1	0	0	0
.....CAGAAGAAAACATTTACAAAAT.......................................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0
...TACAGAAGAAAACATTTACA...........................................................................................................................................................................	20	0	1	1.00	1	0	0	0	0	1
.........................................................................................................................................................................TCACAGATCTAGCCGATGGCA....	21	0	1	1.00	1	1	0	0	0	0
.CATACAGAAGAAAACATTTA.............................................................................................................................................................................	20	0	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................TCACAGATCTAGCCGATGG......	19	0	1	1.00	1	1	0	0	0	0
.................TTTACAAAATGGATGAATTCGTTTCT.......................................................................................................................................................	26	0	1	1.00	1	1	0	0	0	0
....................................................................................................................................................AAATGGAGGTCGAAGACC............................	18	0	1	1.00	1	1	0	0	0	0
..............................................................................................................................................AGGCCAAAATGGAGGTCGAAGACC............................	24	0	1	1.00	1	1	0	0	0	0
.........................ATGGATGAATTCGTTTCTGATCA..................................................................................................................................................	23	0	1	1.00	1	1	0	0	0	0
............................................................................................................................................................................CAGATCTAGCCGATGGCATC..	20	0	1	1.00	1	1	0	0	0	0
.............................................................................................................................................AAGGCCAAAATGGAGGTCGAAGACCTATT........................	29	1	1	1.00	1	1	0	0	0	0
.......................................................................................................................................................................ATTCACAGATCTAGCCGATGGCA....	23	0	1	1.00	1	1	0	0	0	0
........................AATGGATGAATTCGTTTCTGAT....................................................................................................................................................	22	0	1	1.00	1	0	1	0	0	0
.........................ATGGATGAATTCGCTTCTGATCAAGGC..............................................................................................................................................	27	2	1	1.00	1	1	0	0	0	0
.........................ATGGATGAATTCGTTTCTGATC...................................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0
......................................................................................................................................................................TATTCACAGATCTAGCCGATGGCATCAA	28	0	1	1.00	1	0	1	0	0	0
..................................................................................................................................................CAAAATGGAGGTCGAAGACC............................	20	0	1	1.00	1	0	1	0	0	0
..................TTACAAAATGGATGAATTCGT...........................................................................................................................................................	21	0	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................TATTCACAGATCTAGCCGAT........	20	0	1	1.00	1	0	0	1	0	0
.................TTTACAAAATGGATGAATTCGTTT.........................................................................................................................................................	24	0	1	1.00	1	0	1	0	0	0
.......................AAATGGATGAATTCGTTTCTGATC...................................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0
...........................................................................................................................................................................ACAGATCTAGCCGATGGCATCAA	23	0	1	1.00	1	1	0	0	0	0
.......................................................................................................................................................................ATTCACAGATCTAGCCGAT........	19	0	1	1.00	1	0	0	0	1	0
............................................................................................................................................CAAGGCCAAAATGGAGGTCGAAGACC............................	26	2	1	1.00	1	1	0	0	0	0
...........................................................AGAGACAGAGAGATAGAGAGAT.................................................................................................................	22	0	1	1.00	1	1	0	0	0	0
.........................................................................................................................................................................TCACAGATCTAGCCGATGGCATCAA	25	0	1	1.00	1	1	0	0	0	0
............................................................................................................................................CAAGGCCAAAATGGAGGTCGAAGA..............................	24	2	1	1.00	1	0	1	0	0	0
........................AATGGATGAATTCGTTTCTGATC...................................................................................................................................................	23	0	1	1.00	1	1	0	0	0	0
......................................................GACACAGAGACTGAGAGATA........................................................................................................................	20	1	4	0.25	1	0	0	0	1	0
.....................................................AGACACAGAGACAGAGAGA..........................................................................................................................	19	0	8	0.13	1	0	1	0	0	0
..............................................................GACAGAGAGATAGAGAGA..................................................................................................................	18	0	20	0.10	2	2	0	0	0	0
...................................................................................................................................................AAAATTGAGGTCGAGGACT............................	19	3	20	0.05	1	0	1	0	0	0
.....................................................................................AGCAAAAAAACTAGTAGGCA.........................................................................................	20	3	20	0.05	1	0	0	0	1	0

TGTATGTCTTCTTTTGTAAATGTTTTACCTACTTAAGCAAAGACTAGTTCCATTCTGTGTCTCTGTCTCTCTATCTCTCTATCTCTCGTTTTCTTGATCATCTTTAACATTGAAAGAAAGTATAAAGATAAGGTTAAATATATCCGGTTTTACCTCCAGCTTCTGGATAAGTGTCTAGATCGGCTACCGTAGTT ************************************************............((...(((((((((((((.((...((((...............))))..)).)))))).)))))))..))............************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V118 embryo
................................................................................................................CAAGAAGATATAAAGATAAGGT............................................................	22	3	8	0.13	1	1

Species	Coordinate	ID	Alignment
droWil2	scf2_1100000004768:1052624-1052817 -	dwi_2101	ACATACAGAAGAAAACATTTACAAAATGGATGAATTCGTT-TCTGATCAAGGTAAGACAC------------AG---------------------------------------------------------------AGACAGAGAGATAGAGAGATAGAGAGCAAAAGAACTAGTAGAAATTGTAACTTTCTTTCAT------------------------------------------------------------------ATTTC----TATTCCAA-------TTTATATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA
droVir3	scaffold_13049:5236780-5236952 +		ACATCCAAAAGAAGACCTTCACAAAATGGATGAATTCGTT-TCTGATCAAGGTATGACAT------------AA-------AATTATGCACGCTAAT---------------AAAA----GACA-------------------------------------------------------------------CTTTCAC------------------------------------------------------------------AATTGA--TAATGCCATTTGTATATACTTCTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA
droMoj3	scaffold_6680:3603487-3603663 +		ACATCCAAAAGAAGACCTTCACAAAATGGATGAATTCGTT-TCTGATCAAGGTAAGTTTT---------------------------------------------GGTTATTGAGTGCGAAGCGA-AGCTTTCACAAAACAAGAGAA------------------------------------TGCAT-----TTTATT------------------------------------------------------TTAAA---------------------TA-------TCATTCTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATTTAGCCGATGGCATTAA
droGri2	scaffold_15110:13747035-13747205 -		ACATCCAAAAGAAGACCTTTACAAAATGGATGAATTCGTT-TCTGATCAAGGTAAAGTAT------------CT-------AAATATCTATGTAGAT---------------AT---------------------------------------------------------------TAAATCTCGATTCTCTATCAT------------------------------------------------------------------ATTCTG--TCTGGCC----------ACTTGCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA
dp5	XR_group8:5432186-5432343 -		ACATCCAGAAGAAGACGTTCACAAAATGGATGAACTCCTT-TTTGATCAAGGTAAGAA--------------------------------------------------------------GGCG-----------------------------------------------------------------------------------------------------------ATCCCGAATCGATTGAACAGGAACG------------GGGCTAACGCTTT-------TTGTTGCAGGCCAAAATGGAGGTGGAGGATCTATTCACAGATCTGGCCGATGGCATAAA
droPer2	scaffold_38:254186-254344 +		ACATCCAGAAGAAGACGTTCACAAAATGGATGAACTCCTTTTTTGATCAAGGTAAGAG--------------------------------------------------------------GGCG-----------------------------------------------------------------------------------------------------------ATCCCGAATCGGCTAAACAGGAACGGAGCT------------AACGCTTT-------TTGTTGCAGGCCAAAATGGAGGTGGAGGATCTATTCACAGATCTGGCCGATGGCATAAA
droAna3	scaffold_13337:10093883-10094063 -		ACATTCAGAAGAAGACATTTACAAAATGGATGAATTCGTT-TCTGATCAAGGTAGGGTTTTCTCTTCTCTTTA---CTTCTGAAAATATGTGTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------GAATGCATCTCATATTTGT--TTTGGTTTTTGG------TTTATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droBip1	scf7180000396569:1261039-1261195 +		ACATCCAGAAGAAGACCTTCACGAAATGGATGAATTCGTT-TCTGATCAAGGTGGGTTCTCCTCCTC------------------------------------------------------------------------CAAAGTAA------------------------------------TACCT-----CTCATA------------------------------------------------------CTGCATCTCACACT----------------------TTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGACGGCATCAA
droKik1	scf7180000302391:474433-474491 +		T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droFic1	scf7180000454105:1680780-1680859 +		TCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGGGCTTATTGTCT-------TCTCCGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droEle1	scf7180000491249:1889680-1889779 -		ACATCCAGAAGAAGACATTCACAAAATGGATGAACTCCTT-TCTGATCAAGGTGTGT---------------AA-------AAAGATATAGGTTACA----------------------------------------------------------------------AGAAGTCGGACAATTTTCCAGTCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1	scf7180000777856:10118-10176 +		T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droBia1	scf7180000302428:2719496-2719547 +		-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droTak1	scf7180000415855:147755-147828 -		ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCGTT-TCTGATCAAGGTGGGTTTC------------AA---------------------------------------------------------------AACTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAC-A
droEug1	scf7180000409466:1079997-1080282 +		ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCTTT-TCTGATCAAGGTGGGTGCC----TACTGTTTAAAACTTAATAATATATTTGTTAAAACAATCTGGGTTATTGAAATGAAAGCGATAGCTGTGACAG-ACAAAATTA------------------------------------TACATTC------ACTTGAAATTTTTGATTGGAAGAAATTTGTATGGCACCTCGAAT------AATATGAATGCAACTCACATTTGGGCTTATTGTCT-------TCTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
dm3	chr3L:3351956-3352014 +		T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droSim2	3l:3248696-3248754 +		T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droSec2	scaffold_2:3343406-3343464 +		T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droYak3	3L:3898988-3899046 +		T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA
droEre2	scaffold_4784:6041943-6042022 +		TCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGGGCCTATCGTCT-------TCTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droWil2

ACATACAGAAGAAAACATTTACAAAATGGATGAATTCGTT-TCTGATCAAGGTAAGACAC------------AG---------------------------------------------------------------AGACAGAGAGATAGAGAGATAGAGAGCAAAAGAACTAGTAGAAATTGTAACTTTCTTTCAT------------------------------------------------------------------ATTTC----TATTCCAA-------TTTATATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCATCAA	27	1	8.00	8	0	1	2	5	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCAT...	24	1	7.00	7	0	0	2	5	0
.................................ATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	19	1	5.00	5	3	0	0	2	0
.................TTTACAAAATGGATGAATTC......................................................................................................................................................................................................................................................................................................................	20	1	4.00	4	0	0	0	4	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGC.....	22	1	4.00	4	0	0	0	4	0
................................AATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	20	1	4.00	4	0	0	0	4	0
.................TTTACAAAATGGATGAATTCGT....................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	3	0	0
.................TTTACAAAATGGATGAATTCGTT-..................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	1	1	0
...................TACAAAATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	1	1	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCATC..	25	1	2.00	2	0	0	2	0	0
...................................................................................................................................................................................................................................................................................................................................CACAGATCTAGCCGATGGCATCAA	24	1	2.00	2	0	0	0	2	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCAT...	26	1	2.00	2	0	0	0	2	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCATCA.	28	1	2.00	2	2	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGGC.....	20	1	2.00	2	0	0	0	2	0
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGAT.................	19	1	2.00	2	0	0	0	2	0
............................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCT...........................	20	1	1.00	1	0	0	0	1	0
.................TTTACAAAATGGATGAATT.......................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
...................TACAAAATGGATGAATTCGTT-T.................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGC.....	24	1	1.00	1	0	0	0	1	0
.............................ATGAATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0
..................TTACAAAATGGATGAATTC......................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGGCAT...	22	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCTATTCACA....................	27	1	1.00	1	0	0	0	1	0
.CATACAGAAGAAAACATTTACAAA..................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
....................ACAAAATGGATGAATTCGT....................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAAGAC.............................	21	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGATCTAGCCGA.........	27	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGATCTAGCCG..........	28	1	1.00	1	0	1	0	0	0
........................AATGGATGAATTCGTT-TCTGA.............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
.........................ATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
................ATTTACAAAATGGATGAA.........................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.....CAGAAGAAAACATTTACAAAAT................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
...TACAGAAGAAAACATTTACA....................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGGCA....	21	1	1.00	1	0	0	0	1	0
.CATACAGAAGAAAACATTTA......................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGG......	19	1	1.00	1	0	0	0	1	0
.................TTTACAAAATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................AAATGGAGGTCGAAGACC............................	18	1	1.00	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGACC............................	24	1	1.00	1	0	0	0	1	0
.........................ATGGATGAATTCGTT-TCTGATCA..........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................CAGATCTAGCCGATGGCATC..	20	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCA....	23	1	1.00	1	0	0	0	1	0
........................AATGGATGAATTCGTT-TCTGAT............................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
.........................ATGGATGAATTCGTT-TCTGATC...........................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGATCTAGCCGATGGCATCAA	28	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACC............................	20	1	1.00	1	0	0	1	0	0
..................TTACAAAATGGATGAATTCGT....................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGATCTAGCCGAT........	20	1	1.00	1	1	0	0	0	0
.................TTTACAAAATGGATGAATTCGTT-T.................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
.......................AAATGGATGAATTCGTT-TCTGATC...........................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................ACAGATCTAGCCGATGGCATCAA	23	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGAT........	19	1	1.00	1	0	1	0	0	0
........................................................................AG---------------------------------------------------------------AGACAGAGAGATAGAGAGAT..............................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................TCACAGATCTAGCCGATGGCATCAA	25	1	1.00	1	0	0	0	1	0
........................AATGGATGAATTCGTT-TCTGATC...........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
......................................................AGACAC------------AG---------------------------------------------------------------AGACAGAGAGA.......................................................................................................................................................................................................	19	8	0.13	1	0	0	1	0	0
..........................................................................................................................................GACAGAGAGATAGAGAGA...............................................................................................................................................................................................	18	20	0.10	2	0	0	0	2	0

droVir3

ACATCCAAAAGAAGACCTTCACAAAATGGATGAATTCGTT-TCTGATCAAGGTATGACAT------------AA-------AATTATGCACGCTAAT---------------AAAA----GACA-------------------------------------------------------------------CTTTCAC------------------------------------------------------------------AATTGA--TAATGCCATTTGTATATACTTCTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
............AGACCTTCACAAAATGGATGAATT.......................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AATGGATGAATTCGTT-TCTGATCAA.........................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................GACCTATTCACAGATCTAGCCGATG.......	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCAT...	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............................GATGAATTCGTT-TCTGATCAA.........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................GACCTATTCACAGATCTAGC............	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................AAAATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................ATGGATGAATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CCAAAAGAAGACCTTCACAAAATGGATG...........................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGAT.................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................CACAGATCTAGCCGATGGCATC..	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..ATCCAAAAGAAGACCTTCACAAA..................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGCAT...	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGCATCA.	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........AGAAGACCTTCACAAAATGGATGAATT.......................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGAC.............................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................TTCACAAAATGGATGAATTCGTT-TCTG..............................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..ATCCAAAAGAAGACCTTCACAAAATGGA.............................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................GGATGAATTCGTT-TCTGATCAAGGCC.....................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................AATGGATGAATTCGTT-TCTGAT............................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................TTCACAGATCTAGCCGATGGC.....	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTAGCCGATGGC.....	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGACC............................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTAGCCGATGGC.....	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........AAGAAGACCTTCACAAAATG...............................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................CTTCACAAAATGGATGAATT.......................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TCCAAAAGAAGACCTTCACAA...................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CCAAAAGAAGACCTTCACAAAATG...............................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......AAAGAAGACCTTCACAAAATGGAT............................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................ATGGATGAATTCGTT-TCTGAT............................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.........................ATGGATGAATTCGTT-TCTGATCAAGGCC.....................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................AATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GATGAATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........AGAAGACCTTCACAAAAT................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGATCTAGCCGAT........	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................GGAGGTCGAAGACCTATTCACAGAT.................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
.......................AAATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ACATCCAAAAGAAGACCTTCACAAAATGGATGAATTCGTT-TCTGATCAAGGTAAGTTTT---------------------------------------------GGTTATTGAGTGCGAAGCGA-AGCTTTCACAAAACAAGAGAA------------------------------------TGCAT-----TTTATT------------------------------------------------------TTAAA---------------------TA-------TCATTCTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATTTAGCCGATGGCATTAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.............................................................................................................................................................................................................................................................................................................................CCTATTCACAGATTTAGCCGATGGC.....	25	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................CCAAAATGGAGGTCGAAGAC.............................	20	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGA..................	21	1	1.00	1	1	0	0	0	0	0
.CATCCAAAAGAAGACCTTCACAA...................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...........................GGATGAATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAAGACC............................	22	1	1.00	1	0	0	0	0	0	1
...............................GAATTCGTT-TCTGATCAAGGCC.....................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
......AAAAGAAGACCTTCACAAAATG...............................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGA..................	20	1	1.00	1	1	0	0	0	0	0
...................CACAAAATGGATGAATTCGTT-TC................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.....CAAAAGAAGACCTTCACAAAATGG..............................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................................................................................................................................................................................ATTCACAGATTTAGCCGATGGCAT...	24	1	1.00	1	1	0	0	0	0	0
..............................TGAATTCGTT-TCTGATCAAGGCC.....................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATTTAGCCGATGGC.....	24	1	1.00	1	1	0	0	0	0	0

droGri2

ACATCCAAAAGAAGACCTTTACAAAATGGATGAATTCGTT-TCTGATCAAGGTAAAGTAT------------CT-------AAATATCTATGTAGAT---------------AT---------------------------------------------------------------TAAATCTCGATTCTCTATCAT------------------------------------------------------------------ATTCTG--TCTGGCC----------ACTTGCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGATCTAGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dp5

ACATCCAGAAGAAGACGTTCACAAAATGGATGAACTCCTT-TTTGATCAAGGTAAGAA--------------------------------------------------------------GGCG-----------------------------------------------------------------------------------------------------------ATCCCGAATCGATTGAACAGGAACG------------GGGCTAACGCTTT-------TTGTTGCAGGCCAAAATGGAGGTGGAGGATCTATTCACAGATCTGGCCGATGGCATAAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATGGC.....	22	1	3.00	3	0	2	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTGGAGG...............................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...................CACAAAATGGATGAACTCCTT-..................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGAT........	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...................CACAAAATGGATGAACTCCTT-TT................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................GATCTATTCACAGATCTGGCCGATG.......	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTGGAGGATCTATTCAC.....................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................CACAAAATGGATGAACTCCTT-T.................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATG.......	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGATGG......	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGATGGC.....	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..................TCACAAAATGGATGAACTCCTT-..................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.....................CAAAATGGATGAACTCCTT-T.................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................ATCTATTCACAGATCTGGCC...........	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...................CACAAAATGGATGAACTCCTT-TTT...............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GGCCAAAATGGAGGTGGAGG...............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTGGAGGAT.............................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................AATGGAGGTGGAGGATCT...........................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...TCCAGAAGAAGACGTTCACAAAATGGAT............................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................GAGGTGGAGGATCTATTCACA....................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................AAATGGAGGTGGAGGATCT...........................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GGCCAAAATGGAGGTGGAGGATCT...........................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGAT........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATGGCAT...	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.................................ACTCCTT-TTTGATCAAGGC......................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..................TCACAAAATGGATGAACTC......................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
........................AATGGATGAACTCCTT-TTTGATCAAGGC......................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....CCAGAAGAAGACGTTCACAAAATG...............................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTGGAGGATCT...........................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................AACTCCTT-TTTGATCAAGGC......................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGATG.......	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0

droPer2

ACATCCAGAAGAAGACGTTCACAAAATGGATGAACTCCTTTTTTGATCAAGGTAAGAG--------------------------------------------------------------GGCG-----------------------------------------------------------------------------------------------------------ATCCCGAATCGGCTAAACAGGAACGGAGCT------------AACGCTTT-------TTGTTGCAGGCCAAAATGGAGGTGGAGGATCTATTCACAGATCTGGCCGATGGCATAAA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGAT........	19	1	9.00	9	8	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCC...........	18	1	9.00	9	9	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCG..........	19	1	3.00	3	3	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATGGC.....	22	1	3.00	3	2	1	0	0	0	0
...................CACAAAATGGATGAACTCCTT...................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	3	0	0	0	0	0
..................TCACAAAATGGATGAACTCCTTT..................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................TCACAGATCTGGCCGATG.......	18	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGAT........	21	1	2.00	2	0	2	0	0	0	0
...................CACAAAATGGATGAACTCC.....................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATG.......	20	1	2.00	2	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGATCTGGCCGATG.......	22	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGATCTGGCCGAT........	20	1	1.00	1	1	0	0	0	0	0
..........GAAGACGTTCACAAAATGG..............................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTGGAGG...............................	21	1	1.00	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTGGAGGAT.............................	19	1	1.00	1	0	0	0	0	0	1
..................TCACAAAATGGATGAACTCCTT...................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................AGGTGGAGGATCTATTCACA....................	20	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................AATGGAGGTGGAGGATCT...........................	18	1	1.00	1	0	1	0	0	0	0
................GTTCACAAAATGGATGAACT.......................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
...................CACAAAATGGATGAACTCCTTT..................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TCTATTCACAGATCTGGCCGAT........	22	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTGGAGGATCT...........................	23	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................CCAAAATGGAGGTGGAGG...............................	18	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGATCTGGCCGATGGCAT...	24	1	1.00	1	0	0	1	0	0	0

droAna3

ACATTCAGAAGAAGACATTTACAAAATGGATGAATTCGTT-TCTGATCAAGGTAGGGTTTTCTCTTCTCTTTA---CTTCTGAAAATATGTGTGAAT----------------------------------------------------------------------------------------------------------------------------------------------------------GAATGCATCTCATATTTGT--TTTGGTTTTTGG------TTTATAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................TTTACAAAATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	1	0	0	1	1
.................TTTACAAAATGGATGAATT.......................................................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	1	1	0	1	0
.................TTTACAAAATGGATGAATTC......................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
.................TTTACAAAATGGATGAATTCGT....................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	2	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGC.....	23	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACC............................	20	1	1.00	1	0	1	0	0	0	0
.......................AAATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
..................TTACAAAATGGATGAATTCGTT-TCTGAT............................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................CACAGACCTGGCCGATGGCATCAA	24	1	1.00	1	0	1	0	0	0	0
..ATTCAGAAGAAGACATTTACAAA..................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................CACAGACCTGGCCGATGGCATCA.	23	1	1.00	1	0	1	0	0	0	0
.........................ATGGATGAATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0
..................TTACAAAATGGATGAATTCGTT-T.................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
................ATTTACAAAATGGATGAATTCGTT-..................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
.........................ATGGATGAATTCGTT-TCTG..............................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATGGC.....	24	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................TTCACAGACCTGGCCGATGGC.....	21	1	1.00	1	1	0	0	0	0	0
...............................GAATTCGTT-TCTGATCAAGGC......................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................GAAGACCTATTCACAGACCT...............	20	1	1.00	1	1	0	0	0	0	0
................ATTTACAAAATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATG.......	22	1	1.00	1	1	0	0	0	0	0
...................TACAAAATGGATGAATTCGTT-TCT...............................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
............................GATGAATTCGTT-TCTGATCAAGGCC.....................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
..................TTACAAAATGGATGAATTCGTT-TCTG..............................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACC................	20	1	1.00	1	0	1	0	0	0	0
........................AATGGATGAATTCGTT-TCTG..............................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................TTCACAGACCTGGCCGATGGCATCA.	25	1	1.00	1	1	0	0	0	0	0
.....CAGAAGAAGACATTTACAAA..................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
................................AATTCGTT-TCTGATCAAGGCC.....................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCTATT........................	23	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACCTGGCC...........	25	1	1.00	1	0	1	0	0	0	0

droBip1

ACATCCAGAAGAAGACCTTCACGAAATGGATGAATTCGTT-TCTGATCAAGGTGGGTTCTCCTCCTC------------------------------------------------------------------------CAAAGTAA------------------------------------TACCT-----CTCATA------------------------------------------------------CTGCATCTCACACT----------------------TTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGACGGCATCAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGGGCTTATTGTCT-------TCTCCGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ACATCCAGAAGAAGACATTCACAAAATGGATGAACTCCTT-TCTGATCAAGGTGTGT---------------AA-------AAAGATATAGGTTACA----------------------------------------------------------------------AGAAGTCGGACAATTTTCCAGTCTCT----------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCGTT-TCTGATCAAGGTGGGTTTC------------AA---------------------------------------------------------------AACTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAC-A	Size	Hit Count	Total Norm	Total
No Reads

droEug1

ACATTCAGAAGAAGACATTCACAAAATGGATGAACTCTTT-TCTGATCAAGGTGGGTGCC----TACTGTTTAAAACTTAATAATATATTTGTTAAAACAATCTGGGTTATTGAAATGAAAGCGATAGCTGTGACAG-ACAAAATTA------------------------------------TACATTC------ACTTGAAATTTTTGATTGGAAGAAATTTGTATGGCACCTCGAAT------AATATGAATGCAACTCACATTTGGGCTTATTGTCT-------TCTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total
No Reads

dm3

T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................................................................................................................................................................................................................................................................................................................................CAGACCTGGCCGATGGCATCA.	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................ACAGACCTGGCCGATGGCATC..	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................GGAGGTCGAAGACCTAT.........................	17	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATG.......	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGCA....	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATG.......	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAA................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGAC.................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................CTTTGTAGGCCAAAATGGAGG.....................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACCTGGC............	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................GGCCAAAATGGAGGTCGA.................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGACCTGGC............	26	1	3.00	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACCT...........................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................CACAGACCTGGCCGATGGC.....	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................AGGCCAAAATGGAGGTCGAAGACCT...........................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................CTATTCACAGACCTGGCCGATGGC.....	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0

droSec2

T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGCATCA.	26	1	2.00	2	1	0	1	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGCATC..	26	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGCAT...	24	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGA..................	20	1	1.00	1	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGAT........	20	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACC............................	20	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGA..................	18	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGAT........	19	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGAC.............................	19	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGCATC..	25	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................................................................................................................GCCAAAATGGAGGTCGAAGAC.............................	21	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................AGACCTGGCCGATGGCATCA.	20	1	1.00	1	0	0	1	0

droYak3

T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGCAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.............................................................................................................................................................................................................................................................................................................AAATGGAGGTCGAAGACCT...........................	19	1	2.00	2	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGC.....	22	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGAC.............................	18	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGG......	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGACCTGGCC...........	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................CCAAAATGGAGGTCGAAGAC.............................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGACC................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................GAAGACCTATTCACAGACCT...............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGAC.............................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................CAAAATGGAGGTCGAAGACC............................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................GACCTATTCACAGACCTGGC............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................TCACAGACCTGGCCGATGGC.....	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................AAAATGGAGGTCGAAGACC............................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

TCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTGGGCCTATCGTCT-------TCTTTGTAGGCCAAAATGGAGGTCGAAGACCTATTCACAGACCTGGCCGATGGCATCAA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACCT...............	21	1	3.00	3	1	0	0	0	0	2	0
.......................................................................................................................................................................................................................................................................................................................CGAAGACCTATTCACAGACCTGGC............	24	1	3.00	3	0	0	0	0	0	3	0
............................................................................................................................................................................................................................................................................................................................ACCTATTCACAGACCTGGCCGATGGCAT...	28	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGATGGC.....	23	1	1.00	1	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................ATTCACAGACCTGGCCGATGGC.....	22	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................AGACCTATTCACAGACCTGGCCGAT........	25	1	1.00	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................GTCGAAGACCTATTCACAGACCT...............	23	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................TATTCACAGACCTGGCCGAT........	20	1	1.00	1	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................ACAGACCTGGCCGATGGCAT...	20	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................GGTCGAAGACCTATTCACAGA..................	21	1	1.00	1	1	0	0	0	0	0	0

dwi_2101

scf2_1100000004768:1052674-1052767 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-12.4	-12.3	-12.2