ID:

dwi_2078

 Coordinate:

scf2_1100000004768:150618-150768 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.5 -10.4 -10.4

Flybase annnotation

exon [dwil_GLEANR_3201:2]; CDS [Dwil\GK20439-cds]; intron [Dwil\GK20439-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACCACCGTTGACATATCTCACCGACGATGAGAAGATGATGAAGGAGACGGGTGAGTTGTAATCATAGTTGTTGTTGTTGTTCCTGTTTATTGCAGTTGCTCTAAATACAGTTGGACTTAGCATTTGTAATTGTAATTTTTGATAAGGCTTATTAGATTTTGAATATTATTTTTGTTGTCGCAGATATTTCTCAGTTTCTTCTAGTTGATGTTACGCAATGATTGTTTTTTTCTTTTTTAGCATTTTATTAT
*****************************************************************************************************.(((((...((((((..((((...(((((..(((..((((((((...))))))))..)))...)))))...))))))).))).)))))************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 V118
embryo
 M045
female body
 V119
head
 M020
head
..............................GAAGATGATGAAGGAGACGGTTGCC.................................................................................................................................................................................................... 25 3 1 5.00 5 3 1 1 0 0
..........................ATGAGAAGATGATGAAGGA.............................................................................................................................................................................................................. 19 0 1 3.00 3 3 0 0 0 0
..................CACCGACGATGAGAAGATGATGAAGGA.............................................................................................................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0
..............................GAAGATGATGAAGGAGACGGTTGC..................................................................................................................................................................................................... 24 2 1 2.00 2 2 0 0 0 0
..................CACCGACGATGAGAAGATGATGAAGG............................................................................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0
.........................GATGAGAAGATGATGAAGG............................................................................................................................................................................................................... 19 0 1 2.00 2 1 1 0 0 0
..........................ATGAGAAGATGATGAAGGAGA............................................................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0
.........................GATGAGAAGATGATGAAGGA.............................................................................................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0
...........................TGAGAAGATGATGAAGGAGAC........................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
........TGACATATCTCACCGACGATGAG............................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
................................AGATGATGAAGGATACGGTTGC..................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..................CACCGACGATGAGAAGAT....................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
.............................AGAAGATGATGAAGGAGACGGTTGCC.................................................................................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0
............................GAGAAGATGATGAAGGAGACG.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
............................GAGAAGATGATGAAGGATACGG......................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................AGTTGATGTTACGAAATTAT............................. 20 2 2 1.00 2 0 0 2 0 0
..................CACCGACGATGAGAAGATG...................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
...............TCTCACCGACGATGAGAAG......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0
...................................TGATGAAGGAGACGGTTGC..................................................................................................................................................................................................... 19 2 3 1.00 3 1 2 0 0 0
..............................GAAGATGATGAAGGAGAC........................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
...............................AAGATGATGAAGGAGACGGTTGCC.................................................................................................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0
..............................GAAGATGATGAAGGAGACGGT........................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0
..................CACCGACGATGAGAAGATGATGAA................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
..............................GAAGATGATGAAGGAGACG.......................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
..................CACCGACGATGAGAAGATGATG................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
................CTCACCGACGATGAGAAGATGATGAAGGA.............................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
.................................GATGATGAAGGAGACGGGTGAGT................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
............ATATCTCACCGACGATGAGAAGAT....................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0
...........................................................................................................................................................................................................................GATTGTTTTTTTCTTTTTTAGC.......... 22 0 1 1.00 1 0 0 1 0 0
.................................GATGATGAAGGAGACGGTTGC..................................................................................................................................................................................................... 21 2 2 1.00 2 2 0 0 0 0
.......TTGACATATCTCACCGACGAT............................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.......................ACGATGAGAAGATGATGAA................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0
.........GACATATCTCACCGACGATGA............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
............................GAGAAGATGATGAAGGAGACGGT........................................................................................................................................................................................................ 23 1 1 1.00 1 0 0 1 0 0
.........................GATGAGAAGATGATGAAGGAGAC........................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
............................GAGAAGATGATGAAGGAGAC........................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
........TGACATATCTCACCGACGATGA............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0
.....................................................................................................TAAATACAGTTGGACTTAGCA................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0
.......................................................................................................................................................................ATTTTTGTTGTCGCAGATATTT.............................................................. 22 0 1 1.00 1 0 1 0 0 0
..................CACCGACGATGAGAGGATGATGAAGG............................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.................TCACCGACGATGAGAAGATGATGAAGGA.............................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
.....................CGACGATGAGAAGATGATGAA................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0
...........................TGAGAAGATGATGAAGGA.............................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
.................................GATGATGAAGGAGACGGTTGCC.................................................................................................................................................................................................... 22 3 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................CCAGTTGATGTTACGAAAT................................ 19 2 3 0.33 1 0 0 1 0 0
........................................................................................................................................................................................................CCAGTTGATGTTACGAAATTAT............................. 22 3 3 0.33 1 0 0 1 0 0
.......................................................................................TATTGCAGTTGCTCGAAA.................................................................................................................................................. 18 1 6 0.33 2 0 2 0 0 0
........................CGGTGAAAAGAAGATGAAGGAG............................................................................................................................................................................................................. 22 3 4 0.25 1 1 0 0 0 0
...................................................................................................................................GTAATTTTTACTAAGGCTT..................................................................................................... 19 2 4 0.25 1 0 0 0 1 0
...................................TGATGAAGGAGACGGTTGCC.................................................................................................................................................................................................... 20 3 10 0.20 2 1 1 0 0 0
....................................GATGAAGGAGACGGTTGC..................................................................................................................................................................................................... 18 2 6 0.17 1 0 1 0 0 0
..................................ACGATGAAGGAGACGGTTGC..................................................................................................................................................................................................... 20 3 11 0.09 1 1 0 0 0 0
.......................................................................................TATTGCAGTTGCTCGAAAAA................................................................................................................................................ 20 2 12 0.08 1 0 1 0 0 0
.....................................GTGAAGGAGACGGGTGACC................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 1 0 0
........................................................................................................................................................................................................CCAGTTGATGTTACGAAATT............................... 20 3 20 0.05 1 0 0 1 0 0
.....................................................AGTTGTAAGCATGGTTGTC................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

TGGTGGCAACTGTATAGAGTGGCTGCTACTCTTCTACTACTTCCTCTGCCCACTCAACATTAGTATCAACAACAACAACAAGGACAAATAACGTCAACGAGATTTATGTCAACCTGAATCGTAAACATTAACATTAAAAACTATTCCGAATAATCTAAAACTTATAATAAAAACAACAGCGTCTATAAAGAGTCAAAGAAGATCAACTACAATGCGTTACTAACAAAAAAAGAAAAAATCGTAAAATAATA
**************************************************************.(((((...((((((..((((...(((((..(((..((((((((...))))))))..)))...)))))...))))))).))).)))))***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 V117
male body		 M045
female body
........................................................................................CATCGTCAAGGAGATTTATG............................................................................................................................................... 20 3 4 0.25 1 0 1 0
...............................................................................................................................................................................................................TTCAATGGGTTACTAACAA......................... 19 2 4 0.25 1 1 0 0
...............AGTCTGGCTGCTACTCTT.......................................................................................................................................................................................................................... 18 2 13 0.08 1 0 0 1
....................................................................ACAACAACAACAAGGACAA.................................................................................................................................................................... 19 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004768:150568-150818 - dwi_2078 ACCACCGTTGACATATCTCACCGACGATGAGAAGATGATGAAGGAGACGGGTGAGTTGTAATC------ATAGTTGTTGTTGTTGTTCCTGTTTATTGCAGTTGCTCTAAATA--------CAG-------------TTGGACTTAGCATTTGTAATTGTAATTT----TTGATAAGGCTTATTAGATTTTGAATATTATTTTTGTTGTCGC--------------------------------------------------AGATATTTC--TCAGTTTCTTCTAGTTGATGTTACGCAATGATTGTTTTTTTCTTTTTTAGCATTTTAT--------TAT
droVir3 scaffold_13049:13552527-13552582 + TCCCCCGTTGACATACCTCACCGACGACGAGAAGATGATGAAGGAGACAGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:13788108-13788163 - ACCTGCACTAACATTCCTCACCGACGATGAGAAAATGATGAAGGAGACAGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:18976035-18976236 + CCCGCCAATAACTCACCTCACCGACGATGAGAAAATGATGAAGGAGACGGGTGAGTCC--TTT----------------------------AACATTTCAGTTAATTTTAACAACAATGCG---TTTGGAATTTTCAGAGCCTTTAACACTTTTAAGATTACTTTTGCGTGTGTAT----------------------------------TTGTTTAATTTTTTTTTTTTTTTTG-----------TGC------------------------TCAA---CATCAGTTTTTTGTTACGTAATTT---------------G--------------------AT
dp5 XR_group6:4066481-4066725 + dps_3030 CCCACCTCTGACCTTCCTCACCGAGGATGAGAAGATGATGAAGGAGACTGGTGAGTGA--TTCCTTTGTAGACT------------------------------------------GTGCACAGATCTAAAGTTCTAGGGGCCCCTGTAATTTAAACTGTAATCCTGCTTTGATAA----------------------------------GCAGTGAATTCTTTCTTTTATTTTTTCCATACTTTTCGTTCGACGAATTTTAAGATATTTT-TTTAT---TGTGTGCCGCTTGTTACGTAACTC---------------CAAGCATCTCATATGGAGGCTGT
droPer2 scaffold_9:2355734-2355979 + CCCACCTCTGACCTTCCTCACCGAGGATGAGAAGATGATGAAGGAGACTGGTGAGTGA--TTCCTTTGTACACT------------------------------------------GTGCACAGATCTAAAGTTCTAGGGGCCCCTGTAATTTTAACTGTAATCCTGCTTTGATAA----------------------------------GCAGTGAATTCTTTCTTTTATTTTTTCCATACTTTTCGTTCGACGAATTTTAAGATATTTTTTTTAT---TATGTGCCGCTTGTTACGTAACTC---------------CAAGCATCTCATATGGAGGCTGT
droAna3 scaffold_13337:18550024-18550080 + CCCACCACTCACCTTCCTCACCGAAGACGAGAAGATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396741:1736765-1736822 + CCCACCACTCACCTTCCTCACCGATGACGAGAAGATGATGAAGGAGACTGGTGAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302248:79415-79471 + TCCCCCGCTCACCTTCCTCACCGACGACGAGAAGATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453824:248234-248290 - CCCACCACTCACCTTCCTCACCGACGACGAGAAAATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491249:6160964-6161020 - CCCACCCCTTACCTTCCTTACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000773959:38001-38057 + CCCACCTCTTACCTTCCTTACCGACGACGAGAAAATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302529:612031-612087 + CCCACCTCTCACTTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415184:155260-155322 + CCCACCCCTCACTTTCCTTACAGACGATGAGAAAATGATGAAGGAGACTGGTGAGTTTCATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409471:598425-598538 + CCCACCCCTCACTTTCTTCACCGAAGATGAGAAGATGATGAAGGAGACTGGTGAGTTTCTCTT-----TAGATT-------------CATATTGATCTTAGGTGCTCTTAGTT--------CTG-------------T-AAATCTAACATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT
dm3 chr3L:18891038-18891093 - CCCACCCCTCACCTTTCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:18512661-18512716 - CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_19:856717-856772 - CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:21727674-21727729 + CCCACCCCTCACCTTCCTAACCGATGATGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:18707525-18707580 - CCCACCCCTCACCTTCCTCACTGATGACGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
ACCACCGTTGACATATCTCACCGACGATGAGAAGATGATGAAGGAGACGGGTGAGTTGTAATC------ATAGTTGTTGTTGTTGTTCCTGTTTATTGCAGTTGCTCTAAATA--------CAG-------------TTGGACTTAGCATTTGTAATTGTAATTT----TTGATAAGGCTTATTAGATTTTGAATATTATTTTTGTTGTCGC--------------------------------------------------AGATATTTC--TCAGTTTCTTCTAGTTGATGTTACGCAATGATTGTTTTTTTCTTTTTTAGCATTTTAT--------TATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................ATGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................1913.00300300
..................CACCGACGATGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2713.00300300
..................CACCGACGATGAGAAGATGATGAAGG..........................................................................................................................................................................................................................................................................................................2612.00200110
.........................GATGAGAAGATGATGAAGG..........................................................................................................................................................................................................................................................................................................1912.00200110
..........................ATGAGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................2112.00200200
.........................GATGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2012.00200200
...........................TGAGAAGATGATGAAGGAGAC......................................................................................................................................................................................................................................................................................................2111.00101000
........TGACATATCTCACCGACGATGAG.......................................................................................................................................................................................................................................................................................................................2311.00100100
..................CACCGACGATGAGAAGAT..................................................................................................................................................................................................................................................................................................................1811.00100010
............................GAGAAGATGATGAAGGAGACG.....................................................................................................................................................................................................................................................................................................2111.00100100
..................CACCGACGATGAGAAGATG.................................................................................................................................................................................................................................................................................................................1911.00100100
...............TCTCACCGACGATGAGAAG....................................................................................................................................................................................................................................................................................................................1911.00100001
..............................GAAGATGATGAAGGAGAC......................................................................................................................................................................................................................................................................................................1811.00100010
..............................GAAGATGATGAAGGAGACGGT...................................................................................................................................................................................................................................................................................................2111.00101000
..................CACCGACGATGAGAAGATGATGAA............................................................................................................................................................................................................................................................................................................2411.00100100
..............................GAAGATGATGAAGGAGACG.....................................................................................................................................................................................................................................................................................................1911.00101000
..................CACCGACGATGAGAAGATGATG..............................................................................................................................................................................................................................................................................................................2211.00101000
................CTCACCGACGATGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2911.00100100
.................................GATGATGAAGGAGACGGGTGAGT..............................................................................................................................................................................................................................................................................................2311.00100100
............ATATCTCACCGACGATGAGAAGAT..................................................................................................................................................................................................................................................................................................................2411.00100001
..............................................................................................................................................................................................................................................................................................................GATTGTTTTTTTCTTTTTTAGC..................2211.00101000
.......TTGACATATCTCACCGACGAT..........................................................................................................................................................................................................................................................................................................................2111.00100010
.......................ACGATGAGAAGATGATGAA............................................................................................................................................................................................................................................................................................................1911.00101000
.........GACATATCTCACCGACGATGA........................................................................................................................................................................................................................................................................................................................2111.00100010
............................GAGAAGATGATGAAGGAGACGGT...................................................................................................................................................................................................................................................................................................2311.00101000
.........................GATGAGAAGATGATGAAGGAGAC......................................................................................................................................................................................................................................................................................................2311.00100100
............................GAGAAGATGATGAAGGAGAC......................................................................................................................................................................................................................................................................................................2011.00100100
........TGACATATCTCACCGACGATGA........................................................................................................................................................................................................................................................................................................................2211.00100010
...........................................................................................................TAAATA--------CAG-------------TTGGACTTAGCA.................................................................................................................................................................................................2111.00100001
......................................................................................................................................................................................................ATTTTTGTTGTCGC--------------------------------------------------AGATATTT........................................................................2211.00100010
.................TCACCGACGATGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2811.00100100
.....................CGACGATGAGAAGATGATGAA............................................................................................................................................................................................................................................................................................................2111.00101000
...........................TGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................1811.00100100
droVir3
TCCCCCGTTGACATACCTCACCGACGACGAGAAGATGATGAAGGAGACAGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................CGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................1813.003000000000000011000000000000000000000000000000000000000000001000
............................GAGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................1912.002000000000000010000100000000000000000000000000000000000000000000
...........................CGAGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000002000000000000000000000000000000000
.........GACATACCTCACCGACGACGAGA......................................................................................................................................................................................................................................................................................................................2312.002000100000000000000010000000000000000000000000000000000000000000
........TGACATACCTCACCGACGACGAGA......................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
........TGACATACCTCACCGACGA...........................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
............ATACCTCACCGACGACGAGA......................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
............ATACCTCACCGACGACGAGAA.....................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
............................GAGAAGATGATGAAGGAGACA.....................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................GACGACGAGAAGATGATGAAGGAGACA.....................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.................TCACCGACGACGAGAAGATGATGAAGG..........................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................CACCGACGACGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000010000000000000000000000000
............................GAGAAGATGATGAAGGAGACAGT...................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......GTTGACATACCTCACCGACGA...........................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
............................GAGAAGATGATGAAGGAGACAGGT..................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
.........................GACGAGAAGATGATGAAG...........................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........GACATACCTCACCGACGACGAGAAGAT..................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
ACCTGCACTAACATTCCTCACCGACGATGAGAAAATGATGAAGGAGACAGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................GAGAAAATGATGAAGGAGACA.....................................................................................................................................................................................................................................................................................................2111.001100000
......................GACGATGAGAAAATGATGA.............................................................................................................................................................................................................................................................................................................1911.001100000
................................AAATGATGAAGGAGACAGT...................................................................................................................................................................................................................................................................................................1911.001000001
..................CACCGACGATGAGAAAATGATGAAGG..........................................................................................................................................................................................................................................................................................................2611.001000001
........TAACATTCCTCACCGACGATGA........................................................................................................................................................................................................................................................................................................................2211.001100000
.........AACATTCCTCACCGACGATGA........................................................................................................................................................................................................................................................................................................................2111.001100000
.....................CGACGATGAGAAAATGATGAAGG..........................................................................................................................................................................................................................................................................................................2311.001000001
....GCACTAACATTCCTCACCGAC.............................................................................................................................................................................................................................................................................................................................2111.001100000
..................CACCGACGATGAGAAAATGAT...............................................................................................................................................................................................................................................................................................................2111.001000001
..............................GAAAATGATGAAGGAGACA.....................................................................................................................................................................................................................................................................................................1911.001100000
.................................AATGATGAAGGAGACAGT...................................................................................................................................................................................................................................................................................................1811.001100000
..................CACCGACGATGAGAAAATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2711.001000001
......ACTAACATTCCTCACCGACGATGAG.......................................................................................................................................................................................................................................................................................................................2511.001100000
.....CACTAACATTCCTCACCGACGAT..........................................................................................................................................................................................................................................................................................................................2311.001100000
....GCACTAACATTCCTCACCGACGAT..........................................................................................................................................................................................................................................................................................................................2411.001100000
...............................AAAATGATGAAGGAGACA.....................................................................................................................................................................................................................................................................................................1811.001100000
........................CGATGAGAAAATGATGAAGGAGACA.....................................................................................................................................................................................................................................................................................................2511.001100000
..........................ATGAGAAAATGATGAAGGAGACA.....................................................................................................................................................................................................................................................................................................2311.001000001
droGri2
CCCGCCAATAACTCACCTCACCGACGATGAGAAAATGATGAAGGAGACGGGTGAGTCC--TTT----------------------------AACATTTCAGTTAATTTTAACAACAATGCG---TTTGGAATTTTCAGAGCCTTTAACACTTTTAAGATTACTTTTGCGTGTGTAT----------------------------------TTGTTTAATTTTTTTTTTTTTTTTG-----------TGC------------------------TCAA---CATCAGTTTTTTGTTACGTAATTT---------------G--------------------ATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................CACCGACGATGAGAAAATGATG..............................................................................................................................................................................................................................................................................................................2211.00101
dp5
CCCACCTCTGACCTTCCTCACCGAGGATGAGAAGATGATGAAGGAGACTGGTGAGTGA--TTCCTTTGTAGACT------------------------------------------GTGCACAGATCTAAAGTTCTAGGGGCCCCTGTAATTTAAACTGTAATCCTGCTTTGATAA----------------------------------GCAGTGAATTCTTTCTTTTATTTTTTCCATACTTTTCGTTCGACGAATTTTAAGATATTTT-TTTAT---TGTGTGCCGCTTGTTACGTAACTC---------------CAAGCATCTCATATGGAGGCTGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................ATGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................1916.0060300102000
..........................ATGAGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................2115.0050400001000
...........................TGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................1812.0020200000000
.................TCACCGAGGATGAGAAGATGATGAAGG..........................................................................................................................................................................................................................................................................................................2712.0020000000200
...............CCTCACCGAGGATGAGAAGATGATGAAGG..........................................................................................................................................................................................................................................................................................................2912.0020000000200
.......CTGACCTTCCTCACCGAGG............................................................................................................................................................................................................................................................................................................................1912.0020100100000
..........................ATGAGAAGATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................2312.0020200000000
.....CTCTGACCTTCCTCACCGAGG............................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....CTCTGACCTTCCTCACCGAGGAT..........................................................................................................................................................................................................................................................................................................................2311.0010010000000
..CACCTCTGACCTTCCTCACCGAG.............................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................TGAGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................2011.0010100000000
..................CACCGAGGATGAGAAGATGATGA.............................................................................................................................................................................................................................................................................................................2311.0010000000001
..........................ATGAGAAGATGATGAAGG..........................................................................................................................................................................................................................................................................................................1811.0010000100000
..............................GAAGATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................1911.0010100000000
.................................GATGATGAAGGAGACTGGTGC................................................................................................................................................................................................................................................................................................2111.0010000010000
..CACCTCTGACCTTCCTCACCGAGG............................................................................................................................................................................................................................................................................................................................2411.0010100000000
............CTTCCTCACCGAGGATGAGAAG....................................................................................................................................................................................................................................................................................................................2211.0010000010000
.............................AGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................1811.0010100000000
..................CACCGAGGATGAGAAGATGATGAAG...........................................................................................................................................................................................................................................................................................................2511.0010000001000
droPer2
CCCACCTCTGACCTTCCTCACCGAGGATGAGAAGATGATGAAGGAGACTGGTGAGTGA--TTCCTTTGTACACT------------------------------------------GTGCACAGATCTAAAGTTCTAGGGGCCCCTGTAATTTTAACTGTAATCCTGCTTTGATAA----------------------------------GCAGTGAATTCTTTCTTTTATTTTTTCCATACTTTTCGTTCGACGAATTTTAAGATATTTTTTTTAT---TATGTGCCGCTTGTTACGTAACTC---------------CAAGCATCTCATATGGAGGCTGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................ATGAGAAGATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................2518.008800000
..CACCTCTGACCTTCCTCACCGAG.............................................................................................................................................................................................................................................................................................................................2314.004400000
.........................GATGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2014.004300001
..CACCTCTGACCTTCCTCACCGAGG............................................................................................................................................................................................................................................................................................................................2414.004400000
..........................ATGAGAAGATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................2313.003300000
..........................ATGAGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................2113.003111000
..........................ATGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................1912.002011000
......TCTGACCTTCCTCACCGAGG............................................................................................................................................................................................................................................................................................................................2012.002200000
.........................GATGAGAAGATGATGAAGGAGACTG....................................................................................................................................................................................................................................................................................................2512.002200000
..........................ATGAGAAGATGATGAAGGAGACTGC...................................................................................................................................................................................................................................................................................................2511.001100000
..........................ATGAGAAGATGATGAAGGAGACTGG...................................................................................................................................................................................................................................................................................................2511.001100000
..........................ATGAGAAGATGATGAAGG..........................................................................................................................................................................................................................................................................................................1811.001010000
droAna3
CCCACCACTCACCTTCCTCACCGAAGACGAGAAGATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................AGACGAGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................2312.002000020
.........................GACGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2011.001000010
.........................GACGAGAAGATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................2211.001001000
.........CACCTTCCTCACCGAAGACGAGAA.....................................................................................................................................................................................................................................................................................................................2411.001100000
......................GAAGACGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2311.001000010
.............TTCCTCACCGAAGACGAGAAGA...................................................................................................................................................................................................................................................................................................................2211.001001000
..................................ATGATGAAGGAGACTGGTGA................................................................................................................................................................................................................................................................................................2011.001000010
..............................GAAGATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................1911.001010000
..................CACCGAAGACGAGAAGATGATGA.............................................................................................................................................................................................................................................................................................................2311.001000010
........................AGACGAGAAGATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2111.001000001
..................................ATGATGAAGGAGACTGGTGAG...............................................................................................................................................................................................................................................................................................2111.001000001
..............................GAAGATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
CCCACCACTCACCTTCCTCACCGATGACGAGAAGATGATGAAGGAGACTGGTGAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCCCCCGCTCACCTTCCTCACCGACGACGAGAAGATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCCACCACTCACCTTCCTCACCGACGACGAGAAAATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CCCACCCCTTACCTTCCTTACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCCACCTCTTACCTTCCTTACCGACGACGAGAAAATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCCACCTCTCACTTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCCACCCCTCACTTTCCTTACAGACGATGAGAAAATGATGAAGGAGACTGGTGAGTTTCATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CCCACCCCTCACTTTCTTCACCGAAGATGAGAAGATGATGAAGGAGACTGGTGAGTTTCTCTT-----TAGATT-------------CATATTGATCTTAGGTGCTCTTAGTT--------CTG-------------T-AAATCTAACATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTSizeHit CountTotal NormTotal
No Reads
dm3
CCCACCCCTCACCTTTCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................CACCGACGATGAGAAAATGATGA.............................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGAGAAAATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACCGACGATGAGAAAAT..................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000
..................CACCGACGATGAGAAAATGAT...............................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTCACCGACGATGAGAAAATGAT...............................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AAATGATGAAGGAGACTG....................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACCGACGATGAGAAAATG.................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCACCGACGATGAGAAAATGA................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AAATGATGAAGGAGACTGGTG.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................ATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................ATGAGAAAATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACGATGAGAAAATGATGAAGGAGAC......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACGATGAGAAAATGATGAAG...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GATGAAGGAGACTGGTGC................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...ACCCCTCACCTTTCTCACCGA..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCACCGACGATGAGAAAAT..................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................TGAGAAAATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACCGACGATGAGAAAATGATGAAGGAG........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGAGAAAATGATGAAGGAG........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCGACGATGAGAAAATGATGAAGGAGAC......................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACCGACGATGAGAAAATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................AGAAAATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAAAATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GAGAAAATGATGAAGGAGA.......................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CACCGACGATGAGAAAATGATGAA............................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droSim2
CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................TCACCGACGATGAGAAAATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2812.00200000020000000000
..............................GAAAATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................1911.00100100000000000000
................................AAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2411.00101000000000000000
............................GAGAAAATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................2311.00100100000000000000
............................GAGAAAATGATGAAGGAGACTGG...................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.............................AGAAAATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................2011.00100000100000000000
............................GAGAAAATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................2111.00100010000000000000
................CTCACCGACGATGAGAAAATGATGAAGG..........................................................................................................................................................................................................................................................................................................2811.00100010000000000000
droSec2
CCCACCCCTCACCTTCCTCACCGACGATGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............CTTCCTCACCGACGATGAG.......................................................................................................................................................................................................................................................................................................................1912.0020020
.................................AATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................1811.0011000
........................CGATGAGAAAATGATGAAGGA.........................................................................................................................................................................................................................................................................................................2111.0010100
..CACCCCTCACCTTCCTCACCGAC.............................................................................................................................................................................................................................................................................................................................2311.0011000
............................GAGAAAATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................2111.0010010
..........ACCTTCCTCACCGACGATGAG.......................................................................................................................................................................................................................................................................................................................2111.0010001
................................AAATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................1911.0010010
droYak3
CCCACCCCTCACCTTCCTAACCGATGATGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................GAAAATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................1921.00200000020000
.........CACCTTCCTAACCGATGATGAGAAA....................................................................................................................................................................................................................................................................................................................2511.00100100000000
............CTTCCTAACCGATGATGAGA......................................................................................................................................................................................................................................................................................................................2011.00100010000000
..........................ATGAGAAAATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................2520.50110000000000
.........................GATGAGAAAATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................2620.50100000010000
..................................ATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2220.50100010000000
..........................ATGAGAAAATGATGAAGGA.........................................................................................................................................................................................................................................................................................................1920.50100000010000
............................GAGAAAATGATGAAGGAGACC.....................................................................................................................................................................................................................................................................................................2120.50110000000000
droEre2
CCCACCCCTCACCTTCCTCACTGATGACGAGAAAATGATGAAGGAGACTGGTGAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................AATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................1812.0021001000
..............TCCTCACTGATGACGAGAA.....................................................................................................................................................................................................................................................................................................................1911.0010000010
............................GAGAAAATGATGAAGGAGACT.....................................................................................................................................................................................................................................................................................................2111.0010000010
................................AAATGATGAAGGAGACTGT...................................................................................................................................................................................................................................................................................................1911.0010000100
............CTTCCTCACTGATGACGAGA......................................................................................................................................................................................................................................................................................................................2011.0010001000
............CTTCCTCACTGATGACGAGAAA....................................................................................................................................................................................................................................................................................................................2211.0011000000

Generated: 05/18/2015 at 03:15 AM