dwi_2003

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CAGTGGTGATGGACCAACTTCAGAAGAGCCATCGCTTTCCACTGTGACTGATTCGATTCAAGATACGTCAACGGAAAATGATGTCATAGTTTCAGACGAGCCAAGCTCTGAAGAACCTCTACCTGAAGACTCTTTCATTCAACTATCTCAAGATATTTTTGCAAACTCCAATGAACACTTTCAGGAAATTAACATTTCAAGCTCAGAAGAGCCATCTCAGGACACTTCGACTGAGGAAAATATTTCAAGTT ******************************************************************...........((((....((((((((..((((...))))..............))).)))))....)))).....*********************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M020 head	V117 male body	M045 female body
......................................................................................................................CTACCTGAAGACTCTTTCATTCAACT...........................................................................................................	26	0	1	5.00	5	5	0	0
......................................CCACTGTGACTGATTCGATTCAAGATAC.........................................................................................................................................................................................	28	0	1	3.00	3	3	0	0
....................................................................................................CCAAGCTCTGAAGAACCT.....................................................................................................................................	18	0	1	2.00	2	2	0	0
..................................................................................................AGCCAAGCTCTGAAGAACC......................................................................................................................................	19	0	1	2.00	2	2	0	0
....................................................................CAACGGAAAATGATGTCATAGTTTCAGAC..........................................................................................................................................................	29	0	1	2.00	2	2	0	0
......................................................................................................................CTACCTGAAGACTCTTTC...................................................................................................................	18	0	1	2.00	2	2	0	0
............................................................................................................................................................TTTTGCAAACTCCAATGAACACTTT......................................................................	25	0	1	2.00	2	2	0	0
..................................................................................................AGCCAAGCTCTGAAGAACCT.....................................................................................................................................	20	0	1	2.00	2	1	1	0
...................................................................................................GCCAAGCTCTGAAGAACCTCTACCT...............................................................................................................................	25	0	1	1.00	1	1	0	0
...................................................................................................GCCAAGCTCTGAAGAACCTCTACCTGA.............................................................................................................................	27	0	1	1.00	1	1	0	0
..........GGACCAACTTCAGAAGAGC..............................................................................................................................................................................................................................	19	0	1	1.00	1	1	0	0
...................................................................................................GCCAAGCTCTGAAGAACCTCTACC................................................................................................................................	24	0	1	1.00	1	1	0	0
...........................................................................................................................................................TTTTTGCAAACTCCAATGAACACT........................................................................	24	0	1	1.00	1	1	0	0
....................................TTCCACTGTGACTGATTCGAT..................................................................................................................................................................................................	21	0	1	1.00	1	1	0	0
.......................................................................................................................TACCTGAAGACTCTTTCATTCAACC...........................................................................................................	25	1	1	1.00	1	1	0	0
...........................................................................................................................................................TTTTTGCAAACTCCAATGAACACC........................................................................	24	1	1	1.00	1	1	0	0
...................................................................................................GCCAAGCTCTGAAGAACCT.....................................................................................................................................	19	0	1	1.00	1	1	0	0
...................................TTTCCACTGTGACTGATTCGATT.................................................................................................................................................................................................	23	0	1	1.00	1	1	0	0
.................................................................................................................AACCTCTACCTGAAGACTCTTTCATT................................................................................................................	26	0	1	1.00	1	1	0	0
....................................TTCCACTGTGACTGATTCGATTCAAGATA..........................................................................................................................................................................................	29	0	1	1.00	1	1	0	0
.............................................GACTGATTCGATTCAAGATACGT.......................................................................................................................................................................................	23	0	1	1.00	1	0	1	0
.................................................................................................................................................................................................................AGCCATCTCAGGACACTTCGACTGA.................	25	0	1	1.00	1	1	0	0
......................................................................................................AAGCTCGGTAGAACCTCCA..................................................................................................................................	19	3	10	0.10	1	0	0	1
..................................................................................................................ACCACTACCTAAGGACTCT......................................................................................................................	19	3	14	0.07	1	0	0	1
.......................................................................................................AACTCTGACGAACCTTTAC.................................................................................................................................	19	3	17	0.06	1	0	0	1
...........................................................................................................GTGAAGAACCTCATCCTGAA............................................................................................................................	20	3	18	0.06	1	0	1	0

GTCACCACTACCTGGTTGAAGTCTTCTCGGTAGCGAAAGGTGACACTGACTAAGCTAAGTTCTATGCAGTTGCCTTTTACTACAGTATCAAAGTCTGCTCGGTTCGAGACTTCTTGGAGATGGACTTCTGAGAAAGTAAGTTGATAGAGTTCTATAAAAACGTTTGAGGTTACTTGTGAAAGTCCTTTAATTGTAAAGTTCGAGTCTTCTCGGTAGAGTCCTGTGAAGCTGACTCCTTTTATAAAGTTCAA *********************************************************************************************************...........((((....((((((((..((((...))))..............))).)))))....)))).....******************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V118 embryo	V117 male body	M045 female body	M020 head
......................CATCTCGGTAGTGAAAGGT..................................................................................................................................................................................................................	19	2	3	1.67	5	4	1	0	0
...........................CGGTAGCGAAGGGTGACAGTGG..........................................................................................................................................................................................................	22	3	1	1.00	1	0	1	0	0
......................CATCTCGGTAGTGAAAGGTTA................................................................................................................................................................................................................	21	3	5	0.60	3	2	1	0	0
........................TCTCGGTAGTGAAAGGTTA................................................................................................................................................................................................................	19	2	7	0.43	3	2	1	0	0
.......................ATCTCGGTAGTGAAAGGT..................................................................................................................................................................................................................	18	2	9	0.33	3	3	0	0	0
............TGGTTGAAGTCTACGCGG.............................................................................................................................................................................................................................	18	2	8	0.13	1	1	0	0	0
..............................................................................................................TTTTTGGCGATGGACTTCTA.........................................................................................................................	20	3	11	0.09	1	0	0	1	0
........................TCTCGGTAGTGAAAGGTTAG...............................................................................................................................................................................................................	20	3	20	0.05	1	0	0	1	0
..................................CCAAGGTCACACTGACTA.......................................................................................................................................................................................................	18	3	20	0.05	1	0	0	0	1

Species	Coordinate	ID	Alignment
droWil2	scf2_1100000004762:2572726-2572976 +	dwi_2003	CAGTGGTGATGGACCAACTTCAGAAGAGCCATCGCTTTCCACTGTGACTGATTCGATTCAAGATACGTCAACGGAAAATG------------ATGTCATAGTTTCAGACGAGCCAAGCTCTGAAGAACCTCTACCTGAAGACTCT-TTCATTCAACTATCTCAAGATATTTTTG--CAAACTCC---------AATGAACACTTTCAGGAA------------ATTAACATTTCAAGCTCAGAAGAGCCA---------------------------------------TCTCAGGACACTTCGACTGAGGAAAATATTTCAAGTT
droVir3	scaffold_13049:23986088-23986284 -		T------------------TCGGAAGCCCCATCTTCTTCTGCAGTAACGGATCAA---ACAGAGAGTTCAACTGAGAACTCTGTTGAGAGTTCCAGCCCCAGTTCGCAA---------------GCCTCATCCTC------------------------------------------------TTCAGAAGTAACGGATCCT---TCAGAAAGTTCAACCGAGAGCTCTAGTTCCAGTTCCCAGGAACCAT------------------------------------------CAGAAAGTTCCACTGAGAGCTCTAGCTCAAGTT
droGri2	scaffold_6894:3329-3587 -		GAG-------GGATCACCTCCCGAGGCATCATCTTCTTCGTCAGTAACTGAACCATCAA------------CAGAAAGTTCTACTGAAATATCCAACTCAAGTTCGGAGGGATCATCTTCCGAGGCATCATCTTC------------------------------------------------TTCGTCAGTAACTGAACCATCAACAGAAAGTTCTACTGAAATATCCAACTCAAGCTCTGAGGGATCATCTTCTGAGGCATCATCTTCTCCGTCAGTAACTGAACCATCAACAGAAAGTTCTACTGAAATATCCATCCCAAGTT
dp5	XR_group8:4344502-4344759 +		CCA--------------GCTCCGAGGAACCATCTTCCACG---------GAACCTTCTC------------CGGAGAGCTCAACAGAGCCAAATAGCTCCAGCTCAGAGGAACCATCTTCCACGGAACCTTCTCCGGAGAGCTCAACAGAGCCAAATAGCTCCAGCTCTGCGGAACCATCGTCC---------ACGGAACCTTCTCCGGAGAGCTCAACAGAGCCAAATAGCTCCAGCTCCGAGGAACCATCTTCCACGG------------------------AACCTTCTCCGGAGAGCTCAACAGAGCCAAGTAACTCCAGCT
droPer2	scaffold_7155:721-984 +		ATA--------GCTCCAGCTCAGAGGAACCATCTTCCACG---------GAACCTTCTC------------CGGAGAGCTCAACAGAGCCAAATAGCTCCAGCTCCGAGGAACCATCGTCCACGGAACCTTCTCCGGAGAGCTCAACAGAGCCAAGTAGCTCCAGCTCCGAGGAACCCTCGTCC---------ACGGAACCTTCTCCGGAGAGCTCAACCGAGCCGATTACCTCCAGCTCTGAGGAACCATCGTCCACGG------------------------AATCTTCTCCGGAGAGCTCAACAGAGCCGAATAGCTCCAGCT
droFic1	scf7180000454113:2927044-2927178 +		CAA--------------GCTCTGAAGATCCCTCGTCTACA---------GAACCATCCGTAGAAAGCTCAACAGAAGAGA------------ATC------------A------------------------------------------------------------------------------------------------------------------------AGAATCAAGCTCTGAAGATCCCTCGTCCACAG------------------------AACCATCAGTAGACAGCTCAACGGAAGAGAATATTTCAAGCT
droEle1	scf7180000490993:2026547-2026598 +		AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAACAG------------------------AATCATCTCCAGAAAGCTCGACGGAGGAGAATATACCAAGTT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droWil2

CAGTGGTGATGGACCAACTTCAGAAGAGCCATCGCTTTCCACTGTGACTGATTCGATTCAAGATACGTCAACGGAAAATG------------ATGTCATAGTTTCAGACGAGCCAAGCTCTGAAGAACCTCTACCTGAAGACTCT-TTCATTCAACTATCTCAAGATATTTTTG--CAAACTCC---------AATGAACACTTTCAGGAA------------ATTAACATTTCAAGCTCAGAAGAGCCA---------------------------------------TCTCAGGACACTTCGACTGAGGAAAATATTTCAAGTT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..................................................................................................................................CTACCTGAAGACTCT-TTCATTCAACT.........................................................................................................................................................................	26	1	5.00	5	5	0	0	0	0
......................................CCACTGTGACTGATTCGATTCAAGATAC....................................................................................................................................................................................................................................................................	28	1	3.00	3	3	0	0	0	0
................................................................................................................CCAAGCTCTGAAGAACCT....................................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0
..............................................................................................................AGCCAAGCTCTGAAGAACC.....................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0
....................................................................CAACGGAAAATG------------ATGTCATAGTTTCAGAC.........................................................................................................................................................................................................................	29	1	2.00	2	2	0	0	0	0
..................................................................................................................................CTACCTGAAGACTCT-TTC.................................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0
.........................................................................................................................................................................TTTTG--CAAACTCC---------AATGAACACTTT.........................................................................................................................	25	1	2.00	2	2	0	0	0	0
..............................................................................................................AGCCAAGCTCTGAAGAACCT....................................................................................................................................................................................................	20	1	2.00	2	1	0	1	0	0
...............................................................................................................GCCAAGCTCTGAAGAACCTCTACCT..............................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0
...............................................................................................................GCCAAGCTCTGAAGAACCTCTACCTGA............................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0
..........GGACCAACTTCAGAAGAGC.........................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0
...............................................................................................................GCCAAGCTCTGAAGAACCTCTACC...............................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................TTTTTG--CAAACTCC---------AATGAACACT...........................................................................................................................	24	1	1.00	1	1	0	0	0	0
....................................TTCCACTGTGACTGATTCGAT.............................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0
...................................................................................................................................TACCTGAAGACTCT-TTCATTCAACC.........................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................TTTTTG--CAAACTCC---------AATGAACACC...........................................................................................................................	24	1	1.00	1	1	0	0	0	0
...............................................................................................................GCCAAGCTCTGAAGAACCT....................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0
...................................TTTCCACTGTGACTGATTCGATT............................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0
.............................................................................................................................AACCTCTACCTGAAGACTCT-TTCATT..............................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0
....................................TTCCACTGTGACTGATTCGATTCAAGATA.....................................................................................................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0
.............................................GACTGATTCGATTCAAGATACGT..................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................AGCCA---------------------------------------TCTCAGGACACTTCGACTGA.................	25	1	1.00	1	1	0	0	0	0

droVir3

T------------------TCGGAAGCCCCATCTTCTTCTGCAGTAACGGATCAA---ACAGAGAGTTCAACTGAGAACTCTGTTGAGAGTTCCAGCCCCAGTTCGCAA---------------GCCTCATCCTC------------------------------------------------TTCAGAAGTAACGGATCCT---TCAGAAAGTTCAACCGAGAGCTCTAGTTCCAGTTCCCAGGAACCAT------------------------------------------CAGAAAGTTCCACTGAGAGCTCTAGCTCAAGTT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
............................................................................................................................................................................................................................................................................................................TTCCACTGAGAGCTCTAGCT......	20	2	4.50	9	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................GTTCCACTGAGAGCTCTAGCT......	21	2	3.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AGTAACGGATCAA---ACAGAGAGTT..................................................................................................................................................................................................................................................................	23	2	3.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................CCACTGAGAGCTCTAGCTCAA...	21	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AGTAACGGATCAA---ACAGAGA.....................................................................................................................................................................................................................................................................	20	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................GTTCAACTGAGAACTCTGTTGAGAGT...........................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................TCAACCGAGAGCTCTAGTT.............................................................................................	19	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................................................GAAGTAACGGATCCT---TCAG.....................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................GTAACGGATCAA---ACAGAGAGTTCAACTGAGAACTCTGTT.................................................................................................................................................................................................................................................	39	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.............................................................................ACTCTGTTGAGAGTTCCAGCCCCAGTT..............................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CAA---ACAGAGAGTTCAACTGAGAAC.......................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................ACTGAGAACTCTGTTGAGA.............................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................A---ACAGAGAGTTCAACTGAGAACT......................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................AGCCCCATCTTCTTCTGCA...........................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................AGCCCCATCTTCTTCTGCAGT.........................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................CAA---ACAGAGAGTTCAACTGAGA.........................................................................................................................................................................................................................................................	22	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TTCCACTGAGAGCTCTAGC.......	19	2	1.00	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................AACTGAGAACTCTGTTGAGAG............................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................GAGAGTTCAACTGAGAACT......................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................AACGGATCAA---ACAGAGAGTT..................................................................................................................................................................................................................................................................	20	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................AACTGAGAACTCTGTTGAGAGT...........................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................CTC------------------------------------------------TTCAGAAGTAACGGATCCT---TCAGA....................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................GTTCAACCGAGAGCTCTAGTTCCA..........................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................TCATCCTC------------------------------------------------TTCAGAAGTAACGGAT...............................................................................................................................	24	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................ACCGAGAGCTCTAGTTCCAGTTCCCAG..................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................GTAACGGATCCT---TCAGAAAGTT...............................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................CTGTTGAGAGTTCCAGCCCCA.................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................GTTCCACTGAGAGCTCTAGC.......	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................GCAGTAACGGATCAA---ACAGA.......................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................CATCCTC------------------------------------------------TTCAGAAGTAACGGATCC.............................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................CATCCTC------------------------------------------------TTCAGAAGTAACGGA................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................CTGCAGTAACGGATCAA---ACAGAGAGTT..................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AGTAACGGATCAA---ACAGA.......................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TCCAGTTCCCAGGAACCAT------------------------------------------C................................	20	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................ACCGAGAGCTCTAGTTCCAGTTCCC....................................................................................	25	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................ACCGAGAGCTCTAGTTCCA..........................................................................................	19	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................AGTAACGGATCCT---TCAGAAAGT................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................AGTAACGGATCCT---TCAGAAAGTTCAAC...........................................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................CCCAGTTCGCAA---------------GCCTCATCCT................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................TCCACTGAGAGCTCTAGCT......	19	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TTCAACCGAGAGCTCTAGTTCC...........................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................CCACTGAGAGCTCTAGCT......	18	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TTCAACCGAGAGCTCTAGTTCCA..........................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TGTTGAGAGTTCCAGCCCCAGT...............................................................................................................................................................................................................................	22	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................CGAGAGCTCTAGTTCCAGTTCCCAGGA................................................................................	27	2	0.50	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................CGGATCAA---ACAGAGAGTT..................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................GGATCAA---ACAGAGAGTTCAACTGAGA.........................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................GTAACGGATCAA---ACAGAGA.....................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................CGAGAGCTCTAGTTCCAGTTCCCAGG.................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................AGTAACGGATCCT---TCAGAAA..................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GTTCCAGCCCCAGTTCGC...........................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................CCTCATCCTC------------------------------------------------TTCAGAAGTAACGGAT...............................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................AACGGATCCT---TCAGAAAGT................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................AGTAACGGATCCT---TCAGA....................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................TAACGGATCCT---TCAGAAAGTTCA.............................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.............................CATCTTCTTCTGCAGTAACGGA...................................................................................................................................................................................................................................................................................	22	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................TCCCAGGAACCAT------------------------------------------CAGAAAGT.........................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................AACCAT------------------------------------------CAGAAAGTTCCACTGAGA...............	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................CATCTTCTTCTGCAGTAACGGAT..................................................................................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................CAT------------------------------------------CAGAAAGTTCCACTGAGAGCT............	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TTCCAGTTCCCAGGAACCAT------------------------------------------CAGAAAGTT........................	29	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CCAT------------------------------------------CAGAAAGTTCCACTGAGAGCTCTA.........	28	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................ACCAT------------------------------------------CAGAAAGTTCCACTGAGA...............	23	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................AACCAT------------------------------------------CAGAAAGTTCCACTGAGAGCT............	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................................................................................................T------------------------------------------CAGAAAGTTCCACTGAGAGCTC...........	23	3	0.33	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................C------------------------------------------------TTCAGAAGTAACGGATCC.............................................................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TCCAGTTCCCAGGAACCAT------------------------------------------CAGA.............................	23	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................CAGTTCCCAGGAACCAT------------------------------------------CA...............................	19	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CCAGTTCCCAGGAACCAT------------------------------------------CAGA.............................	22	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................TCTAGTTCCAGTTCCCAGGA................................................................................	20	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................AGTTCCACTGAGAGCTCT..........	18	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
................................................................................................................................................................................................................................GCTCTAGTTCCAGTTCCCAGGA................................................................................	22	5	0.20	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................CTAGTTCCAGTTCCCAGGA................................................................................	19	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................GAAAGTTCCACTGAGAGCT............	19	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................TCCACTGAGAGCTCTAGG.......	18	6	0.17	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TTCCACTGAGAGCTCTAG........	18	6	0.17	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droGri2

GAG-------GGATCACCTCCCGAGGCATCATCTTCTTCGTCAGTAACTGAACCATCAA------------CAGAAAGTTCTACTGAAATATCCAACTCAAGTTCGGAGGGATCATCTTCCGAGGCATCATCTTC------------------------------------------------TTCGTCAGTAACTGAACCATCAACAGAAAGTTCTACTGAAATATCCAACTCAAGCTCTGAGGGATCATCTTCTGAGGCATCATCTTCTCCGTCAGTAACTGAACCATCAACAGAAAGTTCTACTGAAATATCCATCCCAAGTT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dp5

CCA--------------GCTCCGAGGAACCATCTTCCACG---------GAACCTTCTC------------CGGAGAGCTCAACAGAGCCAAATAGCTCCAGCTCAGAGGAACCATCTTCCACGGAACCTTCTCCGGAGAGCTCAACAGAGCCAAATAGCTCCAGCTCTGCGGAACCATCGTCC---------ACGGAACCTTCTCCGGAGAGCTCAACAGAGCCAAATAGCTCCAGCTCCGAGGAACCATCTTCCACGG------------------------AACCTTCTCCGGAGAGCTCAACAGAGCCAAGTAACTCCAGCT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..........................................................................................................................CGGAACCTTCTCCGGAGAGCTCAA....................................................................................................................................................................................	24	20	2.05	41	0	36	0	0	0	0	0	5	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCTCAA...................................................................................................................................................................................................................................................	24	20	2.05	41	0	36	0	0	0	0	0	5	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCTCAA.....................	24	20	2.05	41	0	36	0	0	0	0	0	5	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGCTC..............................................................................................................	22	20	1.55	31	0	29	0	0	0	0	0	2	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCTC.......................	22	20	1.45	29	0	29	0	0	0	0	0	0	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCTC.....................................................................................................................................................................................................................................................	22	20	1.45	29	0	29	0	0	0	0	0	0	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCTCAAC..................................................................................................................................................................................................................................................	25	20	1.00	20	0	20	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCTCAAC....................	25	20	1.00	20	0	20	0	0	0	0	0	0	0	0
..........................................................................................................................CGGAACCTTCTCCGGAGAGCTCAAC...................................................................................................................................................................................	25	20	1.00	20	0	20	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GGAACCTTCTCCGGAGAGCTCA.............................................................................................................	22	20	0.70	14	0	14	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCTCAACA...................	26	20	0.65	13	0	9	1	0	0	0	0	3	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGCTCAACA..........................................................................................................	26	20	0.65	13	0	9	1	0	0	0	0	3	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGCT...............................................................................................................	21	20	0.65	13	0	13	0	0	0	0	0	0	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCTCAACA.................................................................................................................................................................................................................................................	26	20	0.50	10	0	9	1	0	0	0	0	0	0	0
..........................................................................................................................CGGAACCTTCTCCGGAGAGCTCAACA..................................................................................................................................................................................	26	20	0.50	10	0	9	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGCTCAACAG.........................................................................................................	27	20	0.30	6	0	4	0	0	0	0	0	2	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGCTCA.............................................................................................................	23	20	0.25	5	0	0	0	0	0	1	1	3	0	0
..............................................................................................................................................................GCTCCAGCTCTGCGGAACC.....................................................................................................................................................	19	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................CGGAACCTTCTCCGGAGAGCTCAACAGA................................................................................................................................................................................	28	20	0.25	5	0	0	0	0	0	0	0	5	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGCTCAACAGA........................................................................................................	28	20	0.25	5	0	0	0	0	0	0	0	5	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCTCAACAG..................	27	20	0.20	4	0	4	0	0	0	0	0	0	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCTCAACAG................................................................................................................................................................................................................................................	27	20	0.20	4	0	4	0	0	0	0	0	0	0	0
..........................................................................................................................CGGAACCTTCTCCGGAGAGCTCAACAG.................................................................................................................................................................................	27	20	0.20	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAG..........................	19	20	0.15	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GGAACCTTCTCCGGAGAGCTC..............................................................................................................	21	20	0.15	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................GG------------------------AACCTTCTCCGGAGAGCTC.......................	21	20	0.15	3	0	3	0	0	0	0	0	0	0	0
.......................................G---------GAACCTTCTC------------CGGAGAGCTC.....................................................................................................................................................................................................................................................	21	20	0.15	3	0	3	0	0	0	0	0	0	0	0
......................................CG---------GAACCTTCTC------------CGGAGAG........................................................................................................................................................................................................................................................	19	20	0.15	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGCTCAAC...........................................................................................................	25	20	0.15	3	0	0	0	0	0	0	0	3	0	0
...........................................................................................................................GGAACCTTCTCCGGAGAGCTC......................................................................................................................................................................................	21	20	0.15	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGC................................................................................................................	20	20	0.15	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................GGAACCTTCTCCGGAGAGCTCAA....................................................................................................................................................................................	23	20	0.15	3	0	3	0	0	0	0	0	0	0	0
............................CCATCTTCCACG---------GAACCTTCTC------------CGG............................................................................................................................................................................................................................................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................CCATCTTCCACGGAACCTTCTCCGG.............................................................................................................................................................................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
......................................................................................AGCCAAATAGCTCCAGCTCAGAGGAACC....................................................................................................................................................................................................................	28	16	0.13	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CCATCTTCCACGG------------------------AACCTTCTCCGG..............................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................TAGCTCCAGCTCAGAGGAACCA...................................................................................................................................................................................................................	22	17	0.12	2	0	2	0	0	0	0	0	0	0	0
.................................TTCCACG---------GAACCTTCTC------------CG.............................................................................................................................................................................................................................................................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................TCAGAGGAACCATCTTCC.............................................................................................................................................................................................................	18	18	0.11	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................TTCCACGG------------------------AACCTTCTCCG...............................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................TTCCACGGAACCTTCTCCG..............................................................................................................................................................................................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................TCTTCCACGGAACCTTCTCCGGT............................................................................................................................................................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TCTTCCACGG------------------------AACCTTCTCCGGT.............................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...............................TCTTCCACG---------GAACCTTCTC------------CGGT...........................................................................................................................................................................................................................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................CCAGCTCAGAGGAACCATC.................................................................................................................................................................................................................	19	20	0.10	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GGAACCTTCTCCGGAGAGCTCAAC...........................................................................................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................CGGAACCTTCTCCGGAGAGCT.......................................................................................................................................................................................	21	20	0.10	2	0	0	1	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCT........................	21	20	0.10	2	0	0	1	0	0	0	0	1	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCT......................................................................................................................................................................................................................................................	21	20	0.10	2	0	0	1	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................AATAGCTCCAGCTCCGAGGAACC.............................................................................	23	11	0.09	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................TAGCTCCAGCTCAGAGGAACCATCT................................................................................................................................................................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................TCCGGAGAGCTCAACAGAGCCAAG...........	24	13	0.08	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................CAGAGGAACCATCTTCCACGGAACC.....................................................................................................................................................................................................	25	15	0.07	1	0	1	0	0	0	0	0	0	0	0
............................................................................................ATAGCTCCAGCTCAGAGGAACCATC.................................................................................................................................................................................................................	25	16	0.06	1	0	0	0	0	0	0	0	1	0	0
.........................................................................................CAAATAGCTCCAGCTCAGAGGAA......................................................................................................................................................................................................................	23	16	0.06	1	0	1	0	0	0	0	0	0	0	0
....................................................................................AGAGCCAAATAGCTCCAGCTCAGAGGAA......................................................................................................................................................................................................................	28	16	0.06	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................GCCAAATAGCTCCAGCTCAGAGGAA......................................................................................................................................................................................................................	25	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................AAATAGCTCCAGCTCAGAGGAACC....................................................................................................................................................................................................................	24	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................AGCTCCAGCTCAGAGGAACC....................................................................................................................................................................................................................	20	17	0.06	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................TCAGAGGAACCATCTTCCACGGA........................................................................................................................................................................................................	23	18	0.06	1	0	1	0	0	0	0	0	0	0	0
................................................................................................CTCCAGCTCAGAGGAACCATCTT...............................................................................................................................................................................................................	23	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................TCCAGCTCAGAGGAACCATCT................................................................................................................................................................................................................	21	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................TCCAGCTCAGAGGAACCATCTTCC.............................................................................................................................................................................................................	24	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.....................................................CTTCTC------------CGGAGAGCTCAAC..................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................TCTC------------CGGAGAGCTCAACAGAGC.............................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................ACG---------GAACCTTCTC------------CGGAGAGCTC.....................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................CCTTCTCCGGAGAGCTCAA.....................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................TCCACG---------GAACCTTCTC------------CGGAGAGCTCA....................................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCTA.....................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................CC---------ACGGAACCTTCTCCGGAGAGCTCA.............................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................C------------CGGAGAGCTCAACAGAGCCAA..........................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................CTC------------CGGAGAGCTCAACAGA...............................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	1	0	0
...............................................................................................................................CCTTCTCCGGAGAGCTCAA....................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................CTTCTCCGGAGAGCTCAACAG.........................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................ACGG------------------------AACCTTCTCCGGAGAGCT........................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................ACGGAACCTTCTCCGGAGAGCT.......................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCTT.....................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................GG------------------------AACCTTCTCCGGAGAGCTCT......................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................CTCCAGCTCAGAGGAACCATC.................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................ACCTTCTCCGGAGAGCTCA.....................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................TCTCCGGAGAGCTCAACAGAGCCA....................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................GAGAGCTCAACAGAGCCAAGTAAC.......	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................CG---------GAACCTTCTC------------CGGAGAGCTCAG...................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCTCAG.....................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................CTCCGGAGAGCTCAACAGA.................	19	20	0.05	1	0	0	0	0	0	0	0	1	0	0
......................................................................................................................TCCACGGAACCTTCTCCGGAGAGCTCA.....................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................ACGGAACCTTCTCCGGAGAGC................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................ACCTTCTCCGGAGAGCTCA......................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................CTCCAGCTCAGAGGAACCATCA................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................AACAGAGCCAAGTAACTCCAGC.	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................................CTTCTC------------CGGAGAGCTCAACAG................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................CTTCTCCGGAGAGCTCAACAG.................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................CTTCTCCGGAGAGCTCAAC...................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCTA.......................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................GGAACCTTCTCCGGAGAGCTCT.....................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TCTCCGGAGAGCTCAACAGAGC...............	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................CCTTCTC------------CGGAGAGCTCAA...................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................ACGG------------------------AACCTTCTCCGGAGAGCTC.......................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................TCTCCGGAGAGCTCAACAGAGC..............................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCCACGG------------------------AACCTTCTCCGGAGAGCTCA......................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................CTCCGGAGAGCTCAACAGA................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	1	0	0
..........................................................................................................................CGGAACCTTCTCCGGAGAGCTA......................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................ACGGAACCTTCTCCGGAGAGCTC......................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................CCGGAGAGCTCAACAGAGCCAA............	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
................................................................................................CTCCAGCTCAGAGGAACC....................................................................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................ACG---------GAACCTTCTC------------CGGAGAGCT......................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................CTCCGGAGAGCTCAACAGAGCCA....................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................CTCCGGAGAGCTCAACAG.........................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................G---------GAACCTTCTC------------CGGAGAGCTCT....................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................CCTTCTCCGGAGAGCTCA.............................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................CGGAACCTTCTCCGGAGAGCTT......................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................CGG------------------------AACCTTCTCCGGAGAGCTT.......................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CGGAACCTTCTCCGGAGAGCTCAAA...........................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	1	0	0
..........................................................................................................................CGGAACCTTCTCCGGAGAGCTCAG....................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TCCGGAGAGCTCAACAGAGCCA....................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................ACCTTCTC------------CGGAGAGCTCA....................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................CCGGAGAGCTCAACAGAGCCAA...........................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GGAACCTTCTCCGGAGAGC................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................CCGGAGAGCTCAACAGAGCCAA...................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................CTTCTCCGGAGAGCTCAAC....................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................GGAACCTTCTCCGGAGAGCTCAACA..........................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0

droPer2

ATA--------GCTCCAGCTCAGAGGAACCATCTTCCACG---------GAACCTTCTC------------CGGAGAGCTCAACAGAGCCAAATAGCTCCAGCTCCGAGGAACCATCGTCCACGGAACCTTCTCCGGAGAGCTCAACAGAGCCAAGTAGCTCCAGCTCCGAGGAACCCTCGTCC---------ACGGAACCTTCTCCGGAGAGCTCAACCGAGCCGATTACCTCCAGCTCTGAGGAACCATCGTCCACGG------------------------AATCTTCTCCGGAGAGCTCAACAGAGCCGAATAGCTCCAGCT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.............................................................................................................GAACCATCGTCCACGGAACCTT...................................................................................................................................................................................................	22	14	0.07	1	0	0	0	0	0	1
...........................................................................................................................................................................GGAACCCTCGTCC---------ACGGAACC.............................................................................................................................	21	20	0.05	1	0	1	0	0	0	0

droFic1

CAA--------------GCTCTGAAGATCCCTCGTCTACA---------GAACCATCCGTAGAAAGCTCAACAGAAGAGA------------ATC------------A------------------------------------------------------------------------------------------------------------------------AGAATCAAGCTCTGAAGATCCCTCGTCCACAG------------------------AACCATCAGTAGACAGCTCAACGGAAGAGAATATTTCAAGCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAACAG------------------------AATCATCTCCAGAAAGCTCGACGGAGGAGAATATACCAAGTT	Size	Hit Count	Total Norm	Total
No Reads

dwi_2003

scf2_1100000004762:2572776-2572926 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-7.9	-7.8	-7.8