ID:

dwi_1975

 Coordinate:

scf2_1100000004762:1071001-1071151 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.5 -6.4 -5.7

Flybase annnotation

CDS [Dwil\GK11012-cds]; exon [dwil_GLEANR_1126:4]; intron [Dwil\GK11012-in]; Antisense to intron [Dwil\GK11748-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TATATATATAAATTTATTATTCCTCGATCTAAATCTCTTTGCACTATCCGTGTGTATGTGTGTGTGTATATTGTTTTGCACCTTCCTCTCCAAAAAACAACCAAACCATAAATCAACATCCATAAATTTCTGTGACCTCATGCATGTTTGCACCAAAAGCCACCTCAACATCAACAACAACAACAACCACCACAACAGCAGCCACCACAACAACAACAATATGGTGCACCATCATACAACAATTATCAACA
*********************************************************.((((.((.....(((((((................)))))))....))))))..................................*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 M020
head
 V117
male body		 V118
embryo
 V119
head
.............................................................................................................................ATTTCTGTGACCTCATGCA........................................................................................................... 19 0 1 3.00 3 0 3 0 0 0
...............................................................................................................................TTCTGTGACCTCATGCATGTTTGCACCA................................................................................................ 28 0 1 3.00 3 0 3 0 0 0
.............................................................................................................................................................CGCCACCTCAACATCAACAACA........................................................................ 22 1 1 2.00 2 2 0 0 0 0
............................................................................................................................AATTTCTGTGACCTCATGCATGTT....................................................................................................... 24 0 1 2.00 2 0 2 0 0 0
...............................................................................................................................TTCTGTGACCTCATGCATGTTTGCACC................................................................................................. 27 0 1 2.00 2 0 2 0 0 0
...............................AATCTCTTTGCACTATCCG......................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................ATAAATTTCTGTGACCTCATGCC........................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
...........ATTTATTATTCCTCGATCTAAATCTCTT.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................TTTCTGTGACCTCATGCA........................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
............................................................................................................................GATTTCTGTGACCTCATGCATGTT....................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................TTTCTGTGACCTCATGCATGTTTGCACC................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
.........................................................GTGTGTGTGTATATTGTTTTGCACC......................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.......................................................................................................AACCATAAATCAACATCCATA............................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.......................................................................TGTTTTGCACCTTCCTCTCC................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................CAACAACAACAATATGGTGCACCA.................... 24 0 1 1.00 1 0 1 0 0 0
.................................................................................................................CAACATCCATAAATCTATGT...................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................AACAACCACCACAACAGCAGCC................................................ 22 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................ATAAATTTCTGTGACCTCATGCA........................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................ATCAACAACAACAACAACCACCACAAC....................................................... 27 0 1 1.00 1 0 0 0 1 0
............................................................................................AAAAACAACCAAACCATAA............................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
................................................................................................................................TCTGTGACCTCATGCATGTTTGCA................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
................................................................................................................................TCTGTGACCTCATGCATGTTTGCACC................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
...................................TCTTTGCACTATCCGTGTGTATG................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0
.................................CCTCTTTGCACTATCCGTGTGTA................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
..................................................................................TTCCTCTCCAAAAAACAACCAAACCA............................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................ACAACAACCACCACAACAGCAGCCACCAC........................................... 29 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................AAAGCCACCTCAACATCAACAACA........................................................................ 24 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................................................CCACAACAGCAGCCACCACAAC........................................ 22 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................ATTTCTGTGACCTCATGCATGTTTGCACC................................................................................................. 29 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................ATTTCTGTGACCTCATGCATGTT....................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.............TTATTATTCCTCGATCTAAAT......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
........................................................................................................ACCATAAATCAACATCCAT................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................AACCACCACAACAGCAGCCA............................................... 20 0 1 1.00 1 0 0 1 0 0
................................................................................................................................................................CACCTCAACATCAACAACAACA..................................................................... 22 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................ACAACAGCAGCCACCACAACA....................................... 21 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................................CAACAGCAGCCACCACAACA....................................... 20 0 3 0.33 1 1 0 0 0 0
................................................................................................................................................................................ACAACAACAACCACCACAAC....................................................... 20 0 4 0.25 1 1 0 0 0 0
................................................CCTGTGTATGTGTGTGTGTATA..................................................................................................................................................................................... 22 1 5 0.20 1 0 0 0 0 1
................................................CGTGTGTATGTGTGTGTGTA....................................................................................................................................................................................... 20 0 10 0.10 1 1 0 0 0 0

Anti-sense strand reads

ATATATATATTTAAATAATAAGGAGCTAGATTTAGAGAAACGTGATAGGCACACATACACACACACATATAACAAAACGTGGAAGGAGAGGTTTTTTGTTGGTTTGGTATTTAGTTGTAGGTATTTAAAGACACTGGAGTACGTACAAACGTGGTTTTCGGTGGAGTTGTAGTTGTTGTTGTTGTTGGTGGTGTTGTCGTCGGTGGTGTTGTTGTTGTTATACCACGTGGTAGTATGTTGTTAATAGTTGT
***********************************************************************************************************.((((.((.....(((((((................)))))))....))))))..................................********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M020
head
 M045
female body
 V119
head
 V117
male body		 V118
embryo
....................................................................................................................GTAGGTATTTAAACACACT.................................................................................................................... 19 1 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................................................................CCGCGTGCTAGTATGTTG........... 18 2 2 1.00 2 2 0 0 0 0
..............................................................................................................................................GGACAATCGTGGTTTTCTG.......................................................................................... 19 3 10 0.90 9 1 8 0 0 0
.....................................................................................................................................................................GTTGTAGTTGTTGTTGTTGT.................................................................. 20 0 20 0.55 11 0 0 11 0 0
...............TAATAAGGAGCTGGATGTA......................................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................TTGGTGGTGTTGTGGTGGGTG.............................................. 21 2 6 0.17 1 0 0 0 1 0
.....................................................................................................................................................................GTTGTAGTTGTTGTTGTTGTTGGT.............................................................. 24 0 7 0.14 1 0 1 0 0 0
......................................................................AAAAATACGTGGAAGGAGAGAT............................................................................................................................................................... 22 3 9 0.11 1 0 0 0 0 1
.................................................................................................................................................................................GTTGTTGCTCGTGGTGTTG....................................................... 19 2 20 0.10 2 0 2 0 0 0
...............................................................................................TGGTTGGGTTGGTATTTAG......................................................................................................................................... 19 2 11 0.09 1 0 0 0 1 0
......ATATTAAGATAATAGGGAGC................................................................................................................................................................................................................................. 20 3 18 0.06 1 0 0 1 0 0
..........................................................................................................................................................TTTTCGGTGGTCTTGTAG............................................................................... 18 2 19 0.05 1 0 1 0 0 0
......................................................................................................................................................................TTGTAGTTGTTGTTGTTGTTG................................................................ 21 0 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004762:1070951-1071201 - dwi_1975 TATATAT-----------------AT--AAATTTATTATTCCTCGATCTAAATCTCTTTGCACTAT--CCG-TG--TGTAT--GT---GTGTGTGTAT------A-TTGTT-------------------TTG------CA---CCTTCCTCTC-------------------------CAA-------------------AAAACAAC----CAAAC---------------------------------------CATAAA---T---CA----------------------------------------------------------------------------------------------ACAT------CCATAAATTTCTGTGACC------------------------------------TCATGC----------ATGT--TT---GCACCAAAAGCCACCTCAACAT---------------------------CA---ACAACAACAACAACCAC---CACAAC--------------AGC---------AGCCACCACAACAACAACAATATGGTGCACCATCATACAA---CAATTATCAACA----------------------------------
droVir3 scaffold_13049:8630018-8630262 - dvi_19024 TGTCTCTCTTATCTCTTTACTCCCAC--ATAT---C-------------------T--GTTCGTAT--CTG-TA--TGCGTATC-----TGTTACT------------GTATCTGT-----TTAACTG--TTGCACTCGCA---CCCACCAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CCTGAATCTGAAA------TT-------------CCATGAC--T----CGC----------ATGTC-TT---GCACCATCAA-CACAAC---------------------------------------------------------CACAACGACAATC-------AAC---------AGCAGCAACCACAGCAACAATATGGTGCGCCGGCCTACGA---CAACTATCAGCA----------------------------------
droMoj3 scaffold_6680:6712359-6712547 + TGTTTAC---------------------------TC---------------------------TGT--TTG-TT--TGTG-----------TAAATGT------T-T---A-------------ACTG--TTGCACTTGCA---CC--CAAACC-------------------------ACC-------------------------------------------------------------------------------AAC-------AACATCCATAAC------------------------------------------------------------CTCTG--TCTCGATTGGCA-----------------------------CCTGAAA------CA-------------CCATGAC--TC----GC----------ATGC---A---ACACCACTGAATACCAC---------------------------------------------------------CAC-----------------AGC---------AGCAACCACCACAGCAACAATATGGTGCACCGTCCTACAA---CAACTACCAGCA----------------------------------
droGri2 scaffold_14906:785377-785614 - ATTT--------------------GT--AAGTTTTATATTTCCCAAGCCAATGTTT--TTTTGTAT--ATA-TA--TATAT--AT---ATGTATATATATTCATATTCATATT--------------------------CATATTTTACCAACT-------------------------GAA-------------------------------------------------------------------------------AGCG-----CA----------------------------------------------------------------------------------------------TCTT------GCTTAGATTTCGC--------T------C--------------TTACTAC--TAGCAGGC----------AGGC--AG---GCAGCAGCAGCAGCAGCAGCAG---------------------------CA---GCAACAACAAC---------AACAACAACAAC--------AAC---------AACAACAACAACAACAACAA-------CAACAGCAACAAA---TAAGTGGCAACA----------------------------------
dp5 XR_group6:9837393-9837601 - dps_3128 AC--------------------------ATATATTC---------------------------T----CTC-TC--TTTCCACATCGTCTGTG--TGT------G-TCGTTTA--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------CAAC--------CAAC------CACA-CACCCATCTACAA-------------------------------------------------------------CATCC--T-------TAACA---CCCGTGATCGAAA------C--------------CCAAA---------T-----------------------GCACCAACGAAC------------------CACC----AAATGCACTAT-------------------------TGAACC--------------------------------AATAGCAGCCACAATACGGT------------------AGCCAGCAGCAGCCACAGTCACAGTCTGTGGC----ACCTCAGTG
droPer2 scaffold_22:1233902-1234161 + ACTATAC-----------------GA----GC--AT---------------------------TGC--CCA-TA--CGCCGGAATC------GAATCG------G-TTGAC------------------------------------------A-------------------------ATGTC---AACGCACTCGCCATCGCACGGGCATGGGCA------TACGCTG---------CTGGCCAA--------------TGGAACGATCAATGC-------------------------CT--------------------------------------------CCTCCGCCGCCGCCA-----------------------CCACAATCCAAAA------AT-------------C---------------CAC--------ATTT--CC---ACAACAACAACA---GCAGCAA------------------------CAACA---ACAACAAC------------AACAACAACA-----------AC---------AACAACAACAACAACAACAACAA----CA----ACAGCAG---C-AGCAGCAACA------------GTTGATCTCATATCCCGCTGTG
droAna3 scaffold_13337:20181560-20181795 + TAAATAA----------------------TG--------------------------------TGA--TTA-AT--TGAT-----------TAA-CAT------T-TTATCATTGTTATTGTAAATTTTTG--------TG---CC-----------------------------------------------------------------------------CACCTAC---------CCGCCAAA--------------AAAAAAAAACAAAAA-------------------------AC--------------------------------------------ATTCCGAC-------------------------------TGTTCATCAAACTCCCAAAAAAAAAAAAAAAAAATATAAT----GTAGCC----------ATGT--AA---ATAGTAGCAACC---GTAGCAC------------------------CACCA---CCAC------------------------CAAC--------AACAACAGCAGCCTTAACAACAACAACAACCATAA--------GCACAACAA---C-AACAACAACA----------------------------------
droBip1 scf7180000396380:51666-51919 + TATACAT-----------------AC--ATAT---A---------------------------TAT--TTA-TG--TGTCTATATG---TATATATAT------A-TTGTATA--------------------------TA---TTTTTGTG-T-------------------------ATTTA---AACACAC--------------TCATTTAT--ATGCCCTCCTCCCTCAAGCCC--------TTCAGTCTTGTATAAA---T---AA--AC---------------------------ACTTGTGCGTGTCTGTCGGTTGCTT---------------------------------------------------------------------CCCCCAATA-------------A---------------TACATTTCCATATGTGTTTGCTACGCTTAA---GTAAAG---------------------------------------------------------TGCAACAGCAGC--------AAC---------ATTAACAACAACAACAACAACA------ACTGCCACATAA---AAATCAACAACA----------------------------------
droKik1 scf7180000302486:2417040-2417235 + AC--------------------------ATACTCTC---------------------------TAT--CTC-TC--CGTCTACATCCAATGTG----------------TATG--------------------------CA---CCTCCCCA--------------------------------------------------------------------------------------------------------------ACG------------------CACCAT--AAATCTATGT-------------------------------------------------------------ACTCAAAC-------CATAA---CCTGTGATCGAAA------A--------------CCATGACACCACCATGC----------A--C--TC---GCACCACCCGAAACACC---------------------------------------------------------TGAACCTCCGATCGA------GC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCTACCAGCA----------------------------------
droFic1 scf7180000453807:985133-985344 + TA--------------------------------------------------------------------------------CATCCACTGTGAATGT------G-TTGTACG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------CAAA------------------CAATAT--CCATCAATGA-------------------------------------------------------------ATTCAAATCACGAC-CATAA---CCTGTGATCGAAA------C--------------CCATGAC--AAACACGC----------ATGC--TG---GCACCACCGAAC------------------CACTCAACTACTGCACCAC-------------------------AAAACCACCGATTGAGTAACAGC---------------AGCAGCAGCAGCAGTACGGTGCTCCTTCCTACGA---TGGCTACCA-------------------------------------
droEle1 scf7180000491255:3499212-3499472 - TAAATAC-----------------ATACATAT---A---------------------------T----G---TGTGTCCGTAG-------------------------ATATG--------------------------CA---ACTAAAAATTGCATTTTATTTGAATAATTTTTGGTGTTTGCTTGTTTTGTTCTCCACGAAACGTTTATTTACAGGGACC------------------------ACTAATTCCT----GCGG---------------------------CATTTACAA-------------------------------------------------------------ATGGATAC-------CAT-----------------------------------------------------TAA----------AAGG--TG---GCGCCGACAACCGCAATGACAA--------CAA--CAA-----------CA---A------CAACAACAGCAACAGCAACAACG-----------GC------AGCAGCGGCAAGAACAGCAGCAA----------TATTACACAACAGC-AACAGGAGCA----------------------------------
droRho1 scf7180000776514:22105-22330 + TT---------------------------------C---------------------------TAT--CTG-TC--TGTGTACATCCACTGTGAATGT------G-TCGAATG--------------------------CA---CCTCCCAACC-------------------------AAT-------------------------------------------------------------------------------AAAA------------------CACCAC--CCATCTATGA-------------------------------------------------------------AATCAAAC-------CATAA---CCTGTGATCGAAA------C--------------CCATGTC--GAACATGC----------ATGT--TG---GCACCACCGAACACCAC-------------CAATGCACCAATGTACCAC-------------------------TGCACCACCGATTGAAT---AGC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCA----------------------------------
droBia1 scf7180000302428:7943920-7944127 - TCCA--------------------AC--ATAT--TC---------------------------TAT--CTG-TC--TGTCTACATCCAATGTGAATGT------G-TCGTACG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AACA------------------CACCAC--CCATCTTCGA-------------------------------------------------------------AATCACAC-------CATAC---CCTGTGGTCGAAA------C--------------CCATGAC--AAACATGC----------ATGC--TG---GCACCACCAAACACCAACG-----------------------------------------------ACCATCACTG------------------------------------AGCAGCAGCAGCAGTACGGTGCTCCTTCCTACGA---CGGCTACCAGCA----------------------------------
droTak1 scf7180000414372:10255-10474 - TCCA--------------------AC--ATAT--TC---------------------------TAT--CTG-TC--TGTCTACATCCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AAAA--------CAAA------CACCAC--CCATCAATGA-------------------------------------------------------------AATCAAAC-------CATAA---CCTGTGATCGAAA------C--------------CCATGAC--AAACATGC----------ATGT--TG---GCACCACCAAAAACCAC---------------------------------------------------------TGCACCACCGGTTGAA---CAGC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCACCAGCA----------------------------------
droEug1 scf7180000409509:711826-712076 + TATATAT-----------------AT----AT--T--------------------------GCTAT--CTA-TC--TGCCTATATG-----T----------------CTATC--------------------------TC---TTTCTCAAAA-------------------------GAC--------------------------ACACTCAGACACACCGCACTCACCTAACGGT--------ACTAATTCCATTCAAA---T---C--------------------------------GTTCCGGTTCGCGTCGCGATCGCGTGTTAACAATTACAAAATTCG--ACTAAAATCGTTAC-------------T-AAA---AATATAATCAAAA------T--------------CAAAA-------------------------T--CG---A----------CACAAC---------------------------------------------------------TACAACAACAAC--------AAC---------AATAACAATAACAACAACAACATCAT---------CACCA---CAAGT-ACAACA----------------------------------
dm3 chr3L:9825107-9825336 + TCCA--------------------AC--ATAT--TC---------------------------TAT--CAATTC--TATCTACATCCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AAAA------------------CACCAC--CCATCTACGA-------------------------------------------------------------ATTAAAAT-------CATAA---CCTGTGATCGAAA------C--------------CCATGTC--GAACATGC----------ATGT--TG---GCACCACCAAACACCACCAC----------------ACCACTGCACCAC-------------------------TGCACCATCGGTTGAATCT---------------------CAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCC----------------------------------
droSim2 3l:9584844-9585076 + dsi_19426 TTC-------------------------------------------------------------------------TATCTACATCCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AA-A------------------CACCAC--CCATCTACGA-------------------------------------------------------------ATTTAAAT-------CATAA---CCTGTGATCGAAA------C--------------CCATGTC--GAACATGC----------ATGT--TG---GCACCACCAAACACCACTGCACCAATGCACCAATGCACCAATGCACCAC-------------------------TGCACCACCGGTTGAATCTCAGC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCA----------------------------------
droSec2 scaffold_0:2057980-2058214 + TTC------------------------------------------------------------TAT--CTATTG--TATCTACATCCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AAAA------------------CACCAC--CCATCTACGA-------------------------------------------------------------ATTTAAAT-------CATAA---CCTGTGACCGAAA------C--------------CCATGTC--GAACATGC----------ATGT--TG---GCACCACCAAACACCACTGCAC--------CAATGCACCAATGCACCAC-------------------------TGCACCACCGGTTGAATCTCAGC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCA----------------------------------
droYak3 X:9704098-9704295 + TATACGT-----------------AT----G---TA---------------------------TGTATG---TA--TATCC-----CACTGCCATT-----CGTGTTCGTGTT--------------------------CG---CCTTCCTTC------------------------------------------------------------------------------------------------------------------------------------------CCATTTACAA-------------------------------------------------------------AC-CAAAT-------CAC--------GCGACTGCGA------C--------------T--TGCC--CCGCACAG----------ATGT--CT---AAACCAACAACA---GCTACAA--------CAA----------------CGACACCAA---CAACAAC------TACACCAACAAC--------------------------AACGACACCAACAACAA-CTACA----CCAACAA---CGA-CACCAACA----------------------------------
droEre2 scaffold_4784:9814039-9814282 + der_776 AC--------------------------ATAT--TC---------------------------TAT--CTG-TC--TGTCCACATGCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AAAA------------------CACCGC--CCATCTACGA-------------------------------------------------------------AACCAAAT-------CATAA---CCTGTGATCGAAA------C--------------CCATGTC--AAACATGC----------ATGT--TG---G-GCCACCAAACACCACTGCAC--------CACTGCACCAATGCACCAC-------------------------TGCACCACCGATTGAATATCAGC---------AGCAGCAACAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCA----------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TATATAT-----------------AT--AAATTTATTATTCCTCGATCTAAATCTCTTTGCACTAT--CCG-TG--TGTAT--GT---GTGTGTGTAT------A-TTGTT-------------------TTG------CA---CCTTCCTCTC-------------------------CAA-------------------AAAACAAC----CAAAC---------------------------------------CATAAA---T---CA----------------------------------------------------------------------------------------------ACAT------CCATAAATTTCTGTGACC------------------------------------TCATGC----------ATGT--TT---GCACCAAAAGCCACCTCAACAT---------------------------CA---ACAACAACAACAACCAC---CACAAC--------------AGC---------AGCCACCACAACAACAACAATATGGTGCACCATCATACAA---CAATTATCAACA----------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGTGACC------------------------------------TCATGC----------A.............................................................................................................................................................................................................1913.00330000
................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTGACC------------------------------------TCATGC----------ATGT--TT---GCACCA.............................................................................................................................................................................................2813.00330000
.............................................................................................................................................................................................................................................................................................................................................................................................AATTTCTGTGACC------------------------------------TCATGC----------ATGT--T.......................................................................................................................................................................................................2412.00220000
................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTGACC------------------------------------TCATGC----------ATGT--TT---GCACC..............................................................................................................................................................................................2712.00220000
..................................................AATCTCTTTGCACTAT--CCG-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................ATAAATTTCTGTGACC------------------------------------TCATGC----------C.............................................................................................................................................................................................................2311.00110000
..............................ATTTATTATTCCTCGATCTAAATCTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTGACC------------------------------------TCATGC----------A.............................................................................................................................................................................................................1811.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTGACC------------------------------------TCATGC----------ATGT--TT---GCACC..............................................................................................................................................................................................2811.00110000
...................................................................................GT---GTGTGTGTAT------A-TTGTT-------------------TTG------CA---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.......................................................................................................................................................................................................................AAC---------------------------------------CATAAA---T---CA----------------------------------------------------------------------------------------------ACAT------CCATA...............................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................TGTT-------------------TTG------CA---CCTTCCTCTC-------------------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAATATGGTGCACCA.........................................................2411.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCAC---CACAAC--------------AGC---------AGCC.....................................................................................2211.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................ATAAATTTCTGTGACC------------------------------------TCATGC----------A.............................................................................................................................................................................................................2311.00110000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---------------------------CA---ACAACAACAACAACCAC---CACAAC--------------.....................................................................................................2711.00100010
.....................................................................................................................................................................................A-------------------AAAACAAC----CAAAC---------------------------------------CATAA......................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGACC------------------------------------TCATGC----------ATGT--TT---GCA................................................................................................................................................................................................2411.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................TCTGTGACC------------------------------------TCATGC----------ATGT--TT---GCACC..............................................................................................................................................................................................2611.00110000
......................................................TCTTTGCACTAT--CCG-TG--TGTAT--G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..................................................................................................................................................TTCCTCTC-------------------------CAA-------------------AAAACAAC----CAAAC---------------------------------------CA.........................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACCAC---CACAAC--------------AGC---------AGCCACCAC................................................................................2911.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCCACCTCAACAT---------------------------CA---ACAACA.......................................................................................................................................2411.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---CACAAC--------------AGC---------AGCCACCACAAC.............................................................................2211.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGTGACC------------------------------------TCATGC----------ATGT--TT---GCACC..............................................................................................................................................................................................2911.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGTGACC------------------------------------TCATGC----------ATGT--T.......................................................................................................................................................................................................2311.00101000
................................TTATTATTCCTCGATCTAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
........................................................................................................................................................................................................................AC---------------------------------------CATAAA---T---CA----------------------------------------------------------------------------------------------ACAT------CCAT................................................................................................................................................................................................................................................................................1911.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAC---CACAAC--------------AGC---------AGCCA....................................................................................2011.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTCAACAT---------------------------CA---ACAACAACA....................................................................................................................................2211.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC--------------AGC---------AGCCACCACAACA............................................................................2120.50101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC--------------AGC---------AGCCACCACAACA............................................................................2030.33101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACCAC---CACAAC--------------.....................................................................................................2040.25101000
.....................................................................CG-TG--TGTAT--GT---GTGTGTGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.10101000
droVir3
TGTCTCTCTTATCTCTTTACTCCCAC--ATAT---C-------------------T--GTTCGTAT--CTG-TA--TGCGTATC-----TGTTACT------------GTATCTGT-----TTAACTG--TTGCACTCGCA---CCCACCAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CCTGAATCTGAAA------TT-------------CCATGAC--T----CGC----------ATGTC-TT---GCACCATCAA-CACAAC---------------------------------------------------------CACAACGACAATC-------AAC---------AGCAGCAACCACAGCAACAATATGGTGCGCCGGCCTACGA---CAACTATCAGCA----------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................TAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CC.........................................................................................................................................................................................................................................................................2113.003003000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------C..................................................................................................................................................................................................................................................................................................................2213.003003000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTGCGCCGGCCTACGA---CA............................................2213.003011000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TT-------------CCATGAC--T----CGC----------ATGTC-T.......................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGCGCCGGCCTACGA---CAACT.........................................2412.002110000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TTAACTG--TTGCACTCGCA---CCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------------------------------------------------CACAACGACAATC-------AAC---------AGCAGCA..................................................................................2512.002001000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------AAC---------AGCAGCAACCACAGCAACA......................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................G--TTGCACTCGCA---CCCACCAACC-------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAC--T----CGC----------ATGTC-TT---GCACC..............................................................................................................................................................................................2112.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTGCGCCGGCCTACGA---CAACT.........................................2612.002010000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGACAATC-------AAC---------AGCAGCAACC...............................................................................2512.002001000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC---------------------------------------------------------CACAACGACAATC-------AAC---------A........................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAATATGGTGCGC...........................................................2012.002001000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAATC-------AAC---------AGCAGCA..................................................................................1912.002000000000000000001100000000000000000000000000000000000000000000
............................................................................................................GTATCTGT-----TTAACTG--TTGCACTCGCA---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002011000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTGCGCCGGCCTAC...................................................1912.002000000000000000001010000000000000000000000000000000000000000000
.................................................................................................................TGT-----TTAACTG--TTGCACTCGCA---CCCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002010000000000000001000000000000000000000000000000000000000000000
.......................CAC--ATAT---C-------------------T--GTTCGTAT--CT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTGCGCCGGCCTACG..................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGCGCCGGCCT.....................................................1511.001000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATC-------AAC---------AGCAGCAACCACAGCAACA......................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACTG--TTGCACTCGCA---CCCACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGACAATC-------AAC---------AGCAGCAACCA..............................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................CTCGCA---CCCACCAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCC......................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGACAATC-------AAC---------AGCAGCAACC...............................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GT-----TTAACTG--TTGCACTCGCA---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATTGGCA-----------------------CCTGAATCTGAAA------........................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................TGCGTATC-----TGTTACT------------GTATCTGT-----TTAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CCTGAATC...................................................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
.................................................................T--CTG-TA--TGCGTATC-----TGTTACT------------GTATCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------AAC---------AGCAGCAACCACAGCAAC.......................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------AGCAGCAACCACAGCAACAAT....................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................TG-TA--TGCGTATC-----TGTTACT------------GTATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................CACCAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CT.................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................C--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CCTG.......................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGACAATC-------AAC---------AGCAGCA..................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------------------------------CACAACGACAATC-------AAC---------.........................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.......................CAC--ATAT---C-------------------T--GTTCGTAT--CTG-TA--................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TAACTG--TTGCACTCGCA---C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
..........................................................GTTCGTAT--CTG-TA--TGCGTATC-----T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000100000000000000000000000000000000000000000
.GTCTCTCTTATCTCTTTACTCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAATC-------AAC---------AGCAGCAACCAC.............................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CCTGAATCTGAAA------TT-------------CCATGAC--T----CGC----------ATGTC-TT---GCACC..............................................................................................................................................................................................3811.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................ACCAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CT.................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CATCCATAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CC.........................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CATCCATAAC--------------------------------------------------------------CTG--CCTCTATTG.....................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGTGCGCCGGCCTACGA---CA............................................2411.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................C-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CT.................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------------------------------CACAACGACAATC-------AAC---------AGCAGC...................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------AAC---------AGCAGCAACCAC.............................................................................1811.001000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................................CTCGCA---CCCACCAACC-------------------------ACC-------------------------------------------------------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------AGCAGCAACCACAGCA.........................................................................1931.003001000000000000001010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC----------ATGTC-TT---GCACCATCAA-CACAAC---------------------------------------------------------C........................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................T----CGC----------ATGTC-TT---GCACCATCA..........................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC----------ATGTC-TT---GCACCATCAA-CACAAC---------------------------------------------------------CA.......................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TG--CCTCTATTGGCA-----------------------CCTGAATCT..................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATC-------AAC---------AGCAGCAACCACAG...........................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGACAATC-------AAC---------AGCAGCAACCA..............................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CCTG.......................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ATCCATAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CC.........................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGTGCGCCGGCCTAC...................................................2011.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-------AAC---------AGCAGCAACCACAGCA.........................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CTG--..............................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------C..................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CTG--CCTCTA........................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CA-----------------------CCTGAATCTGAAA------TT-------------CCATGAC--T----CGC----------..............................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TGAATCTGAAA------TT-------------CCATGAC--................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CCT........................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGCGCCGGCCTACGA---CAAC..........................................2311.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TGT-----TTAACTG--TTGCACTCGCA---CCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTC-TT---GCACCATCAA-CACAAC---------------------------------------------------------C........................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................GTATCTGT-----TTAACTG--TTGCACTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGACAATC-------AAC---------AGCAGC...................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................CTG--TTGCACTCGCA---CCCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------------------------------------CACAACGACAATC-------AAC---------AGCA.....................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGCGCCGGCCTACGA---CAAC..........................................2211.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CCTGAATCTGAAA------TT-------------CCATGAC--................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GT-----TTAACTG--TTGCACTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................ACTCCCAC--ATAT---C-------------------T--GTTCGTAT--CTG-TA--T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CC.........................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAA-CACAAC---------------------------------------------------------CACAACGACA...............................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GCACCATCAA-CACAAC---------------------------------------------------------CACAACG..................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CTG--CCT...........................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATC-------AAC---------AGCAGCAACCAC.............................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTGCGCCGGCCTACGA---CA............................................2311.001000000000000000000100000000000000000000000000000000000000000000
...........TCTCTTTACTCCCAC--ATAT---C-------------------T--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CC.........................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AACTG--TTGCACTCGCA---CCCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAC--T----CGC----------ATGTC-TT---GCACCATCA..........................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................CTG-TA--TGCGTATC-----TGTTACT------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAATC-------AAC---------AGCAGCAAC................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
.......CTTATCTCTTTACTCCCAC--ATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------------------------------------------------CACAACGACAATC-------AAC---------AGCAGC...................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................CAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------CT.................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GCACCATCAA-CACAAC---------------------------------------------------------CACA.....................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................T-------------CCATGAC--T----CGC----------ATGTC-TT---GCACC..............................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAATATGGTGCGCCGGCCTA....................................................2711.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATATGGTGCGCCGGCCTAC...................................................2211.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAATATGGTGCGCC..........................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ACCAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------C..................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGACAATC-------AAC---------AGCAGC...................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................C-------------------T--GTTCGTAT--CTG-TA--TGCGTATC-----TGTTACT------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................ACCAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCATAAC--------------------------------------------------------------...................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................G--CCTCTATTGGCA-----------------------CCTGAATCTGAAA------........................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCAACAATATGGTGCGCC..........................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ACCAACC-------------------------ACC-------------------------------------------------------------------------------AACA--------CATCCA.....................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGAC--T----CGC----------ATGTC-TT---GCACCAT............................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................CTGT-----TTAACTG--TTGCACTCGCA---CCCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAATATGGTGCGCCGGCC......................................................2411.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAATATGGTGCGCCGGCC......................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CACAAC---------------------------------------------------------CACAACGACAATC-------A....................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................CTGT-----TTAACTG--TTGCACTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CCTG.......................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGGTGCGCCGGCCT.....................................................1811.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------------------------------CACAACGACAATC-------AAC---------A........................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
TGTCTCTCTTATCTCTTTACTCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TG--CCTCTATTGGCA-----------------------CCTGAATC...................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CTGAAA------TT-------------CCATGAC--T----CGC----------ATGTC-T.......................................................................................................................................................................................................2511.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................AACTG--TTGCACTCGCA---CCCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................A------TT-------------CCATGAC--T----CGC----------ATGTC-T.......................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
................TTACTCCCAC--ATAT---C-------------------T--GTTCGTAT--CT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................TG--CCTCTATTGGCA-----------------------CCTGAATCTG.................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................GTATCTGT-----TTAACTG--TTGCACTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATAAC--------------------------------------------------------------CTG--CCTCTATTGGCA-----------------------CCTGAAT....................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATATGGTGCGCCGGCCT.....................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TG--TTGCACTCGCA---CCCACCAACC-------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCACAGCAACAATATGGT...............................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................TAACTG--TTGCACTCGCA---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ACTG--TTGCACTCGCA---CCCACCAACC-------------------------ACC-------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTGCGCCGGCCTACGA---CAACT.........................................2511.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-CACAAC---------------------------------------------------------CACAACGACAATC-------.....................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------AGCAGCAACCACAGCAACAATATGG................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................G--CCTCTATTGGCA-----------------------CCTGAATC...................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------AGCAGCAACCACAGCAAC.......................................................................2130.331000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------AGCAGCAACCACAGCA.........................................................................1860.332002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------AGCAGCAACCACAGCAAC.......................................................................2040.251001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------AGCAGCAACCACAGCAA........................................................................1940.251000000000000000001000000000000000000000000000000000000000000000
droMoj3
TGTTTAC---------------------------TC---------------------------TGT--TTG-TT--TGTG-----------TAAATGT------T-T---A-------------ACTG--TTGCACTTGCA---CC--CAAACC-------------------------ACC-------------------------------------------------------------------------------AAC-------AACATCCATAAC------------------------------------------------------------CTCTG--TCTCGATTGGCA-----------------------------CCTGAAA------CA-------------CCATGAC--TC----GC----------ATGC---A---ACACCACTGAATACCAC---------------------------------------------------------CAC-----------------AGC---------AGCAACCACCACAGCAACAATATGGTGCACCGTCCTACAA---CAACTACCAGCA----------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................A------CA-------------CCATGAC--TC----GC----------ATGC---A---...................................................................................................................................................................................................1912.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------CCATGAC--TC----GC----------ATGC---A---ACACCACTG..........................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................AA------CA-------------CCATGAC--TC----GC----------ATGC---A---ACACCAC............................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATATGGTGCACCGTCCTACA..................................................2311.001100000
.....AC---------------------------TC---------------------------TGT--TTG-TT--TGTG-----------TAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
......C---------------------------TC---------------------------TGT--TTG-TT--TGTG-----------TAAATGT------T-T---A-------------ACTG--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
................................................................................................GT------T-T---A-------------ACTG--TTGCACTTGCA---CC--CAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAC--TC----GC----------ATGC---A---ACACCACT...........................................................................................................................................................................................2211.001001000
.................................................................................................T------T-T---A-------------ACTG--TTGCACTTGCA---CC--C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................CATAAC------------------------------------------------------------CTCTG--TCTCGATTGGCA-----------------------------CC...................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................A-------------ACTG--TTGCACTTGCA---CC--CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................A------CA-------------CCATGAC--TC----GC----------ATGC---A---ACACCACTGA.........................................................................................................................................................................................2911.001100000
........................................................................................................................................................................................................................................................................................AAC------------------------------------------------------------CTCTG--TCTCGATTGGCA-----------------------------CCT..................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCACCACAGCAACAA.....................................................................1911.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAATATGGTGCACC..........................................................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GC----------ATGC---A---ACACCACTGAATACCAC---------------------------------------------------------CAC-----------------A....................................................................................................2811.001100000
.........................................................................................................................................................................................................................................................................................AC------------------------------------------------------------CTCTG--TCTCGATTGGCA-----------------------------CCTGAA...............................................................................................................................................................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................ATCCATAAC------------------------------------------------------------CTCTG--TCTCGATT......................................................................................................................................................................................................................................................................................................2211.001100000
..TTTAC---------------------------TC---------------------------TGT--TTG-TT--TGTG-----------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................................................................GCACTTGCA---CC--CAAACC-------------------------ACC-------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................................ATAAC------------------------------------------------------------CTCTG--TCTCGATTGGC...................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................................TCTG--TCTCGATTGGCA-----------------------------CCTGAAA------C.......................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATATGGTGCACCGTC.......................................................1911.001100000
droGri2
ATTT--------------------GT--AAGTTTTATATTTCCCAAGCCAATGTTT--TTTTGTAT--ATA-TA--TATAT--AT---ATGTATATATATTCATATTCATATT--------------------------CATATTTTACCAACT-------------------------GAA-------------------------------------------------------------------------------AGCG-----CA----------------------------------------------------------------------------------------------TCTT------GCTTAGATTTCGC--------T------C--------------TTACTAC--TAGCAGGC----------AGGC--AG---GCAGCAGCAGCAGCAGCAGCAG---------------------------CA---GCAACAACAAC---------AACAACAACAAC--------AAC---------AACAACAACAACAACAACAA-------CAACAGCAACAAA---TAAGTGGCAACA----------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGCAG---------------------------CA---GCA..........................................................................................................................................24200.20440
dp5
AC--------------------------ATATATTC---------------------------T----CTC-TC--TTTCCACATCGTCTGTG--TGT------G-TCGTTTA--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------CAAC--------CAAC------CACA-CACCCATCTACAA-------------------------------------------------------------CATCC--T-------TAACA---CCCGTGATCGAAA------C--------------CCAAA---------T-----------------------GCACCAACGAAC------------------CACC----AAATGCACTAT-------------------------TGAACC--------------------------------AATAGCAGCCACAATACGGT------------------AGCCAGCAGCAGCCACAGTCACAGTCTGTGGC----ACCTCAGTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AAA---------T-----------------------GCACCAACGAAC------------------CACC----.............................................................................................................................................................2013.0030300000000
............................................................................................................................................................................................................................................................................................................................................................................................................AA------C--------------CCAAA---------T-----------------------GCACCAACGAAC------------------C....................................................................................................................................................................2212.0020200000000
...................................................................................................................................................................................AAC-------------------------------------------------------------------------------CAAC--------CAAC------CACA-CACCCATC....................................................................................................................................................................................................................................................................................................................................................................2312.0020101000000
.......................................................................................................................................................ACC-------------------------AAC-------------------------------------------------------------------------------CAAC--------CAAC------CACA-CACCCATCTAC.................................................................................................................................................................................................................................................................................................................................................................2912.0020002000000
....................................................................................TCGTCTGTG--TGT------G-TCGTTTA--------------------------CA---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
...........................................................................................TG--TGT------G-TCGTTTA--------------------------CA---CCTCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
..............................................................................................................................................................................................................................................................................................................................................................................C--T-------TAACA---CCCGTGATCGAAA------C--------------CC.......................................................................................................................................................................................................................................2312.0020200000000
........................................................................................CTGTG--TGT------G-TCGTTTA--------------------------CA---CCTCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAAC------------------CACC----AAATGCACTAT-------------------------.........................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................CACA-CACCCATCTACAA-------------------------------------------------------------CA................................................................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................CATCGTCTGTG--TGT------G-TCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................CC--T-------TAACA---CCCGTGATCGAAA------C--------------CCA......................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACTAT-------------------------TGAACC--------------------------------AATAGCAGCC.........................................................................2411.0010001000000
...............................................................................................TGT------G-TCGTTTA--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................AACA---CCCGTGATCGAAA------C--------------CC.......................................................................................................................................................................................................................................2011.0010000010000
............................................................................................................................................................................................................................................................................................................................................................................................CA---CCCGTGATCGAAA------C--------------CCA......................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................................C--------CAAC------CACA-CACCCATCTA..................................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGT------------------AGCCAGCAGCAGCC...............................1911.0010100000000
.....................................................................................CGTCTGTG--TGT------G-TCGTTTA--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................AA-------------------------------------------------------------CATCC--T-------TAACA---CCCGTGATCGAAA------C--------------CC.......................................................................................................................................................................................................................................2911.0010100000000
......................................................................................GTCTGTG--TGT------G-TCGTTTA--------------------------CA---CCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-------------------------TGAACC--------------------------------AATAGCAGCCACA......................................................................2111.0010000010000
.............................................................................................................TTTA--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------CAAC--------CAAC------C................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
........................................................................................................................................................................................................................................................................................................TACAA-------------------------------------------------------------CATCC--T-------TAACA---CCCGTGATCGAA...............................................................................................................................................................................................................................................................2811.0010100000000
......................................................................................GTCTGTG--TGT------G-TCGTTTA--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................ACATCGTCTGTG--TGT------G-TCGTTTA--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CCCGTGATCGAAA------C--------------CCAAA---------T-----------------------G..................................................................................................................................................................................................2111.0010000001000
....................................................................................TCGTCTGTG--TGT------G-TCGTTTA--------------------------CA---CCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...........................................................................................................................................................................................................................................................................................................AA-------------------------------------------------------------CATCC--T-------TAACA---CCCGTGATCGAAA------C--------------C........................................................................................................................................................................................................................................2811.0010001000000
......................................................................................GTCTGTG--TGT------G-TCGTTTA--------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
................................................................................................................................................CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------CAAC--------CAAC------CA...............................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................CACA-CACCCATCTACAA-------------------------------------------------------------CATCC--T-------TAAC...............................................................................................................................................................................................................................................................................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGT------------------AGCCAGCAGCAGCCACA............................2411.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGAAA------C--------------CCAAA---------T-----------------------GCA................................................................................................................................................................................................2011.0010000001000
...........................................................................................................................................................................................................................................................................................................................................................................................ACA---CCCGTGATCGAAA------C--------------CCAAA---------T-----------------------GCA................................................................................................................................................................................................2611.0010000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACAATACGGT------------------AGCCA........................................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAAC------------------CACC----AAATGCACTAT-------------------------TGAACC--------------------------------...................................................................................2711.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCACAGTCACAGTCTGTGGC----ACCTC....2811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................CCGTGATCGAAA------C--------------CCAAA---------T-----------------------G..................................................................................................................................................................................................2011.0010000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCACAGTCACAGTCTGTGGC----ACCT.....2811.0010100000000
.......................................................................................TCTGTG--TGT------G-TCGTTTA--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................TC--TTTCCACATCGTCTGTG--TGT------G-TC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................................................................ACATCGTCTGTG--TGT------G-TCGTTTA--------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000000
................................................................................CACATCGTCTGTG--TGT------G-TCGTTTA--------------------------CA---C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
..........................................................................................................................................................................................................................................................................................................................................................................................AACA---CCCGTGATCGAAA------C--------------CCA......................................................................................................................................................................................................................................2111.0010000010000
.....................................................................................................................................................CAACC-------------------------AAC-------------------------------------------------------------------------------CAAC--------CAAC------CACA-CACC........................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................CA---CCCGTGATCGAAA------C--------------CCAAA---------T-----------------------...................................................................................................................................................................................................2211.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................GTGATCGAAA------C--------------CCAAA---------T-----------------------GCACCAACGAA........................................................................................................................................................................................2811.0010100000000
...................................................................................ATCGTCTGTG--TGT------G-TCGTTTA--------------------------CA---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
ACTATAC-----------------GA----GC--AT---------------------------TGC--CCA-TA--CGCCGGAATC------GAATCG------G-TTGAC------------------------------------------A-------------------------ATGTC---AACGCACTCGCCATCGCACGGGCATGGGCA------TACGCTG---------CTGGCCAA--------------TGGAACGATCAATGC-------------------------CT--------------------------------------------CCTCCGCCGCCGCCA-----------------------CCACAATCCAAAA------AT-------------C---------------CAC--------ATTT--CC---ACAACAACAACA---GCAGCAA------------------------CAACA---ACAACAAC------------AACAACAACA-----------AC---------AACAACAACAACAACAACAACAA----CA----ACAGCAG---C-AGCAGCAACA------------GTTGATCTCATATCCCGCTGTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................CGCCATCGCACGGGCATGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
....................................................................CCA-TA--CGCCGGAATC------GAATCG------G-TTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................GCACTCGCCATCGCACGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA----CA----ACAGCAG---C-AGCAGC......................................24200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAA----CA----ACAGC...................................................19200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAACAACAA----CA----A.......................................................23200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA----CA----ACAGCAG---C-AGCAGCA.....................................20200.051001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAACAA----CA----ACAGCAG---..............................................28200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA----CA----ACAGCAG---C-............................................19200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---GCAGCAA------------------------CAACA---AC...........................................................................................................................................21200.051001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAACAA----CA----ACAGC...................................................26200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------------CAACA---ACAACAAC------------AACAACAACA-----------AC---------.........................................................................................28200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA---GCAGCAA------------------------CAACA---.............................................................................................................................................22200.051010000
droAna3
TAAATAA----------------------TG--------------------------------TGA--TTA-AT--TGAT-----------TAA-CAT------T-TTATCATTGTTATTGTAAATTTTTG--------TG---CC-----------------------------------------------------------------------------CACCTAC---------CCGCCAAA--------------AAAAAAAAACAAAAA-------------------------AC--------------------------------------------ATTCCGAC-------------------------------TGTTCATCAAACTCCCAAAAAAAAAAAAAAAAAATATAAT----GTAGCC----------ATGT--AA---ATAGTAGCAACC---GTAGCAC------------------------CACCA---CCAC------------------------CAAC--------AACAACAGCAGCCTTAACAACAACAACAACCATAA--------GCACAACAA---C-AACAACAACA----------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................AAACTCCCAAAAAAAAAAAAAA............................................................................................................................................................................................................................................2220.501010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAACAA---C-AACAACAACA----------------------------------19200.051010000
droBip1
TATACAT-----------------AC--ATAT---A---------------------------TAT--TTA-TG--TGTCTATATG---TATATATAT------A-TTGTATA--------------------------TA---TTTTTGTG-T-------------------------ATTTA---AACACAC--------------TCATTTAT--ATGCCCTCCTCCCTCAAGCCC--------TTCAGTCTTGTATAAA---T---AA--AC---------------------------ACTTGTGCGTGTCTGTCGGTTGCTT---------------------------------------------------------------------CCCCCAATA-------------A---------------TACATTTCCATATGTGTTTGCTACGCTTAA---GTAAAG---------------------------------------------------------TGCAACAGCAGC--------AAC---------ATTAACAACAACAACAACAACA------ACTGCCACATAA---AAATCAACAACA----------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AC--------------------------ATACTCTC---------------------------TAT--CTC-TC--CGTCTACATCCAATGTG----------------TATG--------------------------CA---CCTCCCCA--------------------------------------------------------------------------------------------------------------ACG------------------CACCAT--AAATCTATGT-------------------------------------------------------------ACTCAAAC-------CATAA---CCTGTGATCGAAA------A--------------CCATGACACCACCATGC----------A--C--TC---GCACCACCCGAAACACC---------------------------------------------------------TGAACCTCCGATCGA------GC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCTACCAGCA----------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TA--------------------------------------------------------------------------------CATCCACTGTGAATGT------G-TTGTACG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------CAAA------------------CAATAT--CCATCAATGA-------------------------------------------------------------ATTCAAATCACGAC-CATAA---CCTGTGATCGAAA------C--------------CCATGAC--AAACACGC----------ATGC--TG---GCACCACCGAAC------------------CACTCAACTACTGCACCAC-------------------------AAAACCACCGATTGAGTAACAGC---------------AGCAGCAGCAGCAGTACGGTGCTCCTTCCTACGA---TGGCTACCA-------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAAATAC-----------------ATACATAT---A---------------------------T----G---TGTGTCCGTAG-------------------------ATATG--------------------------CA---ACTAAAAATTGCATTTTATTTGAATAATTTTTGGTGTTTGCTTGTTTTGTTCTCCACGAAACGTTTATTTACAGGGACC------------------------ACTAATTCCT----GCGG---------------------------CATTTACAA-------------------------------------------------------------ATGGATAC-------CAT-----------------------------------------------------TAA----------AAGG--TG---GCGCCGACAACCGCAATGACAA--------CAA--CAA-----------CA---A------CAACAACAGCAACAGCAACAACG-----------GC------AGCAGCGGCAAGAACAGCAGCAA----------TATTACACAACAGC-AACAGGAGCA----------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TT---------------------------------C---------------------------TAT--CTG-TC--TGTGTACATCCACTGTGAATGT------G-TCGAATG--------------------------CA---CCTCCCAACC-------------------------AAT-------------------------------------------------------------------------------AAAA------------------CACCAC--CCATCTATGA-------------------------------------------------------------AATCAAAC-------CATAA---CCTGTGATCGAAA------C--------------CCATGTC--GAACATGC----------ATGT--TG---GCACCACCGAACACCAC-------------CAATGCACCAATGTACCAC-------------------------TGCACCACCGATTGAAT---AGC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCA----------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCCA--------------------AC--ATAT--TC---------------------------TAT--CTG-TC--TGTCTACATCCAATGTGAATGT------G-TCGTACG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AACA------------------CACCAC--CCATCTTCGA-------------------------------------------------------------AATCACAC-------CATAC---CCTGTGGTCGAAA------C--------------CCATGAC--AAACATGC----------ATGC--TG---GCACCACCAAACACCAACG-----------------------------------------------ACCATCACTG------------------------------------AGCAGCAGCAGCAGTACGGTGCTCCTTCCTACGA---CGGCTACCAGCA----------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCCA--------------------AC--ATAT--TC---------------------------TAT--CTG-TC--TGTCTACATCCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AAAA--------CAAA------CACCAC--CCATCAATGA-------------------------------------------------------------AATCAAAC-------CATAA---CCTGTGATCGAAA------C--------------CCATGAC--AAACATGC----------ATGT--TG---GCACCACCAAAAACCAC---------------------------------------------------------TGCACCACCGGTTGAA---CAGC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCACCAGCA----------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TATATAT-----------------AT----AT--T--------------------------GCTAT--CTA-TC--TGCCTATATG-----T----------------CTATC--------------------------TC---TTTCTCAAAA-------------------------GAC--------------------------ACACTCAGACACACCGCACTCACCTAACGGT--------ACTAATTCCATTCAAA---T---C--------------------------------GTTCCGGTTCGCGTCGCGATCGCGTGTTAACAATTACAAAATTCG--ACTAAAATCGTTAC-------------T-AAA---AATATAATCAAAA------T--------------CAAAA-------------------------T--CG---A----------CACAAC---------------------------------------------------------TACAACAACAAC--------AAC---------AATAACAATAACAACAACAACATCAT---------CACCA---CAAGT-ACAACA----------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TCCA--------------------AC--ATAT--TC---------------------------TAT--CAATTC--TATCTACATCCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AAAA------------------CACCAC--CCATCTACGA-------------------------------------------------------------ATTAAAAT-------CATAA---CCTGTGATCGAAA------C--------------CCATGTC--GAACATGC----------ATGT--TG---GCACCACCAAACACCACCAC----------------ACCACTGCACCAC-------------------------TGCACCATCGGTTGAATCT---------------------CAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCC----------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGTACGGTGCTC...........................................................18141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052100010300000420000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGTACGGTGCTCC..........................................................19130.003000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000041100000300000110000800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGTACGGTGCTCCGTCT......................................................23115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001700000100000010000300000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
TTC-------------------------------------------------------------------------TATCTACATCCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AA-A------------------CACCAC--CCATCTACGA-------------------------------------------------------------ATTTAAAT-------CATAA---CCTGTGATCGAAA------C--------------CCATGTC--GAACATGC----------ATGT--TG---GCACCACCAAACACCACTGCACCAATGCACCAATGCACCAATGCACCAC-------------------------TGCACCACCGGTTGAATCTCAGC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCA----------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTCCGTCTTACGA---TG............................................1811.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TAA---CCTGTGATCGAAA------C--------------CCATGTC--GAACA...........................................................................................................................................................................................................................2911.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------AGCAGCAGCAGCAGTA...................................................................18200.05100000000001000000
droSec2
TTC------------------------------------------------------------TAT--CTATTG--TATCTACATCCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AAAA------------------CACCAC--CCATCTACGA-------------------------------------------------------------ATTTAAAT-------CATAA---CCTGTGACCGAAA------C--------------CCATGTC--GAACATGC----------ATGT--TG---GCACCACCAAACACCACTGCAC--------CAATGCACCAATGCACCAC-------------------------TGCACCACCGGTTGAATCTCAGC---------------AGCAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCA----------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................AATGTGAATGT------G-TCGTATG--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200
....................................................................................TCCAATGTGAATGT------G-TCGTATG--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------AGCAGCAGCAGCAGTACGGTGCT............................................................2511.0011000
........................................................................................ATGTGAATGT------G-TCGTATG--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................................................................................AATGTGAATGT------G-TCGTATG--------------------------CA---CCTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGTACGGT...............................................................2011.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGGTTGAATCTCAGC---------------AGCAGCAGC..........................................................................2611.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGTACGGTGCTCC..........................................................2211.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................A---CCTGTGACCGAAA------C--------------CCATGTC--G...............................................................................................................................................................................................................................2311.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................TGTGACCGAAA------C--------------CCATGTC--GAACA...........................................................................................................................................................................................................................2411.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTACGGTGCTCCGTCT......................................................2011.0010001
................................................................................TACATCCAATGTGAATGT------G-TCGTATG--------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGTC--GAACATGC----------ATGT--TG---GCACCAC............................................................................................................................................................................................2511.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACGGTGCTCCGTCTTACGA---TGGC..........................................2611.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGTACGGTGCTCCGTCT......................................................2611.0011000
............................................................................................................................................................................................................................................................................................................................................................................................AA---CCTGTGACCGAAA------C--------------CCATGTC--G...............................................................................................................................................................................................................................2411.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................ACCGAAA------C--------------CCATGTC--GAACA...........................................................................................................................................................................................................................2011.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTTGAATCTCAGC---------------AGCAGCAGC..........................................................................2411.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTACGGTGCTCCGTCTTACGA---TGGC..........................................2811.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................A---CCTGTGACCGAAA------C--------------CCATGTC--GAA.............................................................................................................................................................................................................................2511.0011000
........................................................................................ATGTGAATGT------G-TCGTATG--------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCGGTTGAATCTCAGC---------------A..................................................................................2011.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CATGC----------ATGT--TG---GCACCACCA..........................................................................................................................................................................................2011.0010001
droYak3
TATACGT-----------------AT----G---TA---------------------------TGTATG---TA--TATCC-----CACTGCCATT-----CGTGTTCGTGTT--------------------------CG---CCTTCCTTC------------------------------------------------------------------------------------------------------------------------------------------CCATTTACAA-------------------------------------------------------------AC-CAAAT-------CAC--------GCGACTGCGA------C--------------T--TGCC--CCGCACAG----------ATGT--CT---AAACCAACAACA---GCTACAA--------CAA----------------CGACACCAA---CAACAAC------TACACCAACAAC--------------------------AACGACACCAACAACAA-CTACA----CCAACAA---CGA-CACCAACA----------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AC--------------------------ATAT--TC---------------------------TAT--CTG-TC--TGTCCACATGCAATGTGAATGT------G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------AAC-------------------------------------------------------------------------------AAAA------------------CACCGC--CCATCTACGA-------------------------------------------------------------AACCAAAT-------CATAA---CCTGTGATCGAAA------C--------------CCATGTC--AAACATGC----------ATGT--TG---G-GCCACCAAACACCACTGCAC--------CACTGCACCAATGCACCAC-------------------------TGCACCACCGATTGAATATCAGC---------AGCAGCAACAGCAGCAGCAGTACGGTGCTCCGTCTTACGA---TGGCCAGCAGCA----------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAATATCAGC---------AGCAGCAAC................................................................................2315.0052000120
....................................................................................TGCAATGTGAATGT------G-TCGTATG--------------------------CA---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0022000000
...............................................................TAT--CTG-TC--TGTCCACATGCAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGGTGCTCCGTCTTACGA---TGGCC.........................................2612.0022000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGTACGGTGCTCC..........................................................2212.0020000020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAATATCAGC---------AGCAGCAACAGC.............................................................................2612.0021000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGTACGGTGCT............................................................2111.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................AAT-------CATAA---CCTGTGATCGAAA------C--------------.........................................................................................................................................................................................................................................2211.0010010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGC----------ATGT--TG---G-GCCACCAAAC.......................................................................................................................................................................................2411.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGTC--AAACATGC----------ATGT--TG---G-GCCACCA..........................................................................................................................................................................................2611.0011000000
...............................................................................................TGT------G-TCGTATG--------------------------CA---CCTCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
............................................................................................GAATGT------G-TCGTATG--------------------------CA---CCTCCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGTACGGTGCTC...........................................................2611.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGATTGAATATCAGC---------AGCAGCA..................................................................................2411.0010010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTACGA---TGGCCAGCAGC...................................2011.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAATATCAGC---------AGCAGC...................................................................................2011.0010000010
..........................................................................................GTGAATGT------G-TCGTATG--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
...............................................................................................TGT------G-TCGTATG--------------------------CA---CCTCCCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTACGGTGCTCCG.........................................................1811.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGTACGGT...............................................................2011.0010000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATGC----------ATGT--TG---G-GCCACCA..........................................................................................................................................................................................2211.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTACGA---TGGCCAGCAGC...................................1911.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................TAA---CCTGTGATCGAAA------C--------------CCATGTC--A...............................................................................................................................................................................................................................2511.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGATTGAATATCAGC---------AGCAGCAAC................................................................................2511.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTACGGTGCTCCGTCTT.....................................................2211.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTC--AAACATGC----------ATGT--TG---G-GCCACC...........................................................................................................................................................................................2611.0011000000
.....................................................................................................................................................................................................................................................................................................ATCTACGA-------------------------------------------------------------AACCAAAT-------CATAA---CCTGTGAT...................................................................................................................................................................................................................................................................2911.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTC--AAACATGC----------ATGT--TG---G-GCCACCA..........................................................................................................................................................................................2711.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGATTGAATATCAGC---------AGC......................................................................................2011.0010000010
........................................................................................ATGTGAATGT------G-TCGTATG--------------------------CA---CCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..................................................................................CATGCAATGTGAATGT------G-TCGTATG--------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTTACGA---TGGCCAGCA.....................................1911.0010000010
........................................................................................ATGTGAATGT------G-TCGTATG--------------------------CA---CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGTACGGTGCTC...........................................................2511.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................TGTGATCGAAA------C--------------CCATGTC--................................................................................................................................................................................................................................1911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAATATCAGC---------AGCAGCAACA...............................................................................2311.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................TGTGATCGAAA------C--------------CCATGTC--A...............................................................................................................................................................................................................................2011.0010000100
.......................................................................................................................................................ACC-------------------------AAC-------------------------------------------------------------------------------AAAA------------------CACCGC--CCATCTACG................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
........................................................................................................G-TCGTATG--------------------------CA---CCTCCCAACC-------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--TG---G-GCCACCAAACACCACTGCAC--------C....................................................................................................................................................................2711.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................A---CCTGTGATCGAAA------C--------------CCATGTC--................................................................................................................................................................................................................................2211.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CATGC----------ATGT--TG---G-GCCACCA..........................................................................................................................................................................................1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACGA---TGGCCAGCAGCA----------------------------------1911.0011000000
........................................................................................ATGTGAATGT------G-TCGTATG--------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTTACGA---TGGCCAGC......................................1811.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGAATATCAGC---------AGCAGCA..................................................................................2111.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGT--TG---G-GCCACCAAACACCACT.................................................................................................................................................................................2211.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGAATATCAGC---------AGCAGCAAC................................................................................2411.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTACGGTGCTCCGTCTTACGA---T.............................................2711.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACGGTGCTCCGTCTTACGA---TGT...........................................2611.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGATTGAATATCAGC---------AGCA.....................................................................................2211.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC----------ATGT--TG---G-GCCACCAAACACC....................................................................................................................................................................................2311.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAGC---------AGCAGCAACAGCA............................................................................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGTACGGT...............................................................2311.0010000010
..........................................................................................GTGAATGT------G-TCGTATG--------------------------CA---CCTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.......................................................................................................................................................................................................................................................................AA------------------CACCGC--CCATCTACGA-------------------------------------------------------------..................................................................................................................................................................................................................................................................................................1811.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................AACCAAAT-------CATAA---CCTGTGATCGAA...............................................................................................................................................................................................................................................................2511.0011000000
....................................................................................TGCAATGTGAATGT------G-TCGTATG--------------------------CC---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGC----------ATGT--TG---G-GCCACCAAACACC....................................................................................................................................................................................2711.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC----------ATGT--TG---G-GCCACCAAACACCA...................................................................................................................................................................................2411.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGTACGGTGCTC...........................................................2011.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................AA---CCTGTGATCGAAA------C--------------CCA......................................................................................................................................................................................................................................1911.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................AAT-------CATAA---CCTGTGATCGA................................................................................................................................................................................................................................................................1911.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAGTACGGT...............................................................2511.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAGT....................................................................2090.1110100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGC---------AGCAGCAACAGCAGCA.........................................................................22110.0910001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGT....................................................................18190.0511000000

Generated: 05/18/2015 at 03:03 AM