ID:

dwi_1972

 Coordinate:

scf2_1100000004762:980059-980209 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.3 -16.0

Flybase annnotation

CDS [Dwil\GK11089-cds]; exon [dwil_GLEANR_1133:3]; intron [Dwil\GK11089-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGCTTAAAAAGCGAGGACAATTGTTCAGTAATCCTCGTTTTTTGAAAACAGTGAGAGCCACATTGCCTATATTTCATGAGAAAGGTGTACTAGAGACTCCTTGAAACTCCACGTAAAATCACAGTACACCATACAGAAACTGAGGTATTAACATATCTGAGGTATTAAGTTAGCAGCGATTTTTTTTATTAGCTTTTTACAGCTTTTAATAATGGGATTAAATTTGTCTTAATAAAAATTTGACTTCTTAT
***************************************************************************........((((((((.((.......((......)).......))..)))))))).........((.((((((....)))))).)).........********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V117
male body		 V118
embryo
 M020
head
 M045
female body
 V119
head
...........................................................................ATGAGAAAGGTGTACTAGAGACTC........................................................................................................................................................ 24 0 1 2.00 2 0 0 2 0 0
....................................................................ATATTTCATGAGAAAGGT..................................................................................................................................................................... 18 0 1 2.00 2 0 2 0 0 0
.....................................................................................TGTACTAGAGACTCCTTGAAAC................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0
.................CAATTGTTCAGTAATCCTCGT..................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................ATTAACATATCTGAGGTATTAAGT................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.............................................................ATTGCCTATATTTCATGAGAAAGG...................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 1
...............................................................................................................................................................................................................AATAATGGGATTAAATTTGTC....................... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................ACACCATACAGAAACTGAGGT......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................ACCATACAGAAACTGAGGT......................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
............................................................................................................CCACGTAAAATCACAGTACACC......................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................TTTTACAGCTTTTAATAATGGGAT................................. 24 0 1 1.00 1 0 0 0 1 0
..................................................................................................................................................................................................................AATGGGATTAAATTTGTCTT..................... 20 0 1 1.00 1 1 0 0 0 0
..........................................................................CATGAGAAAGGTGTACTA............................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................AATAATGGGATTAAATTTGT........................ 20 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................CACCATACAGAAACTGAGGT......................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................ATTAAGTTAGTAGCGATG...................................................................... 18 2 5 0.20 1 0 1 0 0 0
........................................................................................ACTAGAGACTCGGTGAAA................................................................................................................................................. 18 2 6 0.17 1 0 0 0 1 0
..................................................................................AGGTGTAGTGGAGACCCCT...................................................................................................................................................... 19 3 6 0.17 1 1 0 0 0 0

Anti-sense strand reads

ACGAATTTTTCGCTCCTGTTAACAAGTCATTAGGAGCAAAAAACTTTTGTCACTCTCGGTGTAACGGATATAAAGTACTCTTTCCACATGATCTCTGAGGAACTTTGAGGTGCATTTTAGTGTCATGTGGTATGTCTTTGACTCCATAATTGTATAGACTCCATAATTCAATCGTCGCTAAAAAAAATAATCGAAAAATGTCGAAAATTATTACCCTAATTTAAACAGAATTATTTTTAAACTGAAGAATA
*********************************************************************************........((((((((.((.......((......)).......))..)))))))).........((.((((((....)))))).)).........*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
.........................................................................................................TGAGGGGCCTTTTAGTTTC............................................................................................................................... 19 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004762:980009-980259 - dwi_1972 TGCTTAAAAAG-------CGA-G-GACAATTGTTCAGTAATCCTCGTTTTTTGAAAACAGTGAGAG--------CCACATTGCCTATATTTCATGAGAAAGGTGTACTAGAGACTCCTTGA-------AA--------------------------------------------------------------------------------------------CTCCACGTAAAATCACA-------GTACACCATACAGAAAC-------------------TGAGGT------------------ATTAACATATCTGAGGTATTAA------G---TTAGCAG------------------------------------------------------------------------------------------CGATTTTTTTTATTA-GCTTTTTACAGCTTTTAATAA------------------TGGGATTA-----------------AA---------------------TTTGTCTTAATAAA--------------------------AATTT-------------GACTTCTTAT
droVir3 scaffold_12958:2352642-2352741 + AGATATTAATT-------T------------ATTTTTCAGTTAACTTTTGTCTTCAATA--------------------------------------------------------------------------------------TCGTTGTGTACGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGAAG------------------------------------T------------------CGTGTTCA-----------------TG---------------------TTAGTTTAAATGAA--------------------------AA---------------GTTTTTCTTAA
droMoj3 scaffold_6541:1288875-1289000 - CATA-CAGTGA-------CGA-A-CTAAATTATTGGCAC-AG--CAAGCTTTTTCAACTTTAAAG---------CAATTTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTG-TTTTTTAACG--------------------------------------TT----------------TTTTTAGTTAAACAAA---AAATTTACTAAATAGAAT-------------------------TGT-------------GTATTTCTTAA
droGri2 scaffold_15110:22358840-22358938 - TGCTGGAGAAA-------CGA-C-ATCAGCTCTTTGCCAGTGAACGAGTTCGGCAGACCCTACAGG--------CCACCTTGGGACACTTTGATCAGCAAGGCGTACTAAATATTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XR_group6:10948870-10948975 + CGGAACTGAAG-------CGT-C-GCCAGCTGTTTGCCAACGAGCGAGTGCGTCAGACGGTCAAAG--------TGTCACTGCTGGCATTCGATCAGCAGGGCATACTGGACACGCCCTAG-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_20:859318-859423 + CGGAACTGAAG-------CGT-C-GTCAGCTGTTTGCCAACGAGCGAGTGCGTCAGACGGTCAAAG--------TGTCACTGCTGGCATTCGATCAGCAGGGCATACTGGACACGCCCTAG-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_8612:4296-4446 + TTTTTAAAACC-------ACA-A-GTTAAC-----------ACGTAAAGCACTTGGACCACAAAAATTGAAAATTTTATATATTTACGTTACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------ACCCACAT--GTTTTATTCCTGGTTTA-------------------------------------------------------------------------------ATAATATTTAAAAA------------------GTAAAT-----------------ATAC---------------------CTTTTTTTA--CGA--------------------------AATTT-------------AATTGCATAT
droBip1 scf7180000395018:8366-8523 - AAATTAAA-AG-------TAA-T-ATCAATATATAGCATATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCGA-----------------------------------------------------TT-----ACG--------GAAACATGTGAAATAAACTCTT---G---------ATTTACTT--TTCTTATT------TTTAAA-------------------------------------------------------------------------------AAATTTAAAAACTACCTCAATTACAGCACCGCCTTTG-----------------GG---------------------TTTATTTTAAGCAA--------------------------ATCTT-------------AACTGATTAA
droKik1 scf7180000302810:495294-495428 - CATGTAAAATC-------GTGTA-GTTAAC-----AAAGAGAAGCGAATGTAAAAAATTGTCGGAG--------CATTTGCACTAAAGCCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------------ATTTATTT--TTTTTACT------CATTAA----------------------------------------------------------------------------------------------------------------------------------------------CTAAATGT----AATTTAAATAAATAAG--------------------------ATAT-------------ATATTTAGCAT
droFic1 scf7180000453317:16596-16808 + TTTTCGAAAAC-------AGACT-GACAA--CCTGA-------------------------------------------AACCTTATATTTTTTATAAAGTCTGGACTTTAAATTCCTAAGGTGTGTCAACTCTTTGCTAAACCAAGGTTGTTTATTGGATGTTGACGGGTTATATTTCGGAACAAACGAGTTAAAAAAAATTATAATGGCGTCTTCCATATTGCCAG------------------ATATAAGTTGATTAAGTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGA--------------------------AAGTT-------------AGCCCTTCGA
droEle1 scf7180000490201:5166-5358 - CATTAGAAGGG-------AGT-A-GTGGAGTCATCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTCTGATTAA--------ATAGTGGCCACTCATCGG-----------------------------------------------------TTACA--CCA--------GAAAATTGTGGTAGGTATTTCA---G---------ATTCATCT--TTCATCTA------TGTTAT-------------------------------------------------------------------------------GAACTTAAGTTATTTTTCTGTGTTAACATCTCGTATTGTC----------------TTTTTAGTCGTACAGCTAA-----------------------------------------------CGTATTTATTTCATTTTGATTAT
droRho1 scf7180000772128:454-665 + AATCACCTTTTTTCGAGGTGC-A-GCCGGAGA-----------------------------------------------TTGCTTATATCTCACTCA-----------------------------------------------------------------------------------AAG------------CAAAAATTATACTGAGACTATTCGTATCGCCAATAAA-----------------AATCGTAAAAAATG-------------------CAGAGAATTAAACATAAG----GA-AAACCATTTTCAAATTATAAT------A---TTAAAAG------------------------------------------------------------------------------------------CTCTTAAATCGTTCAGAATT----------------------------------------------TTGATAGCTCACTTTTA-------------------------AAAC------------------------------------CGAAAATGATAAAA---ATTCAT
droBia1 scf7180000297460:655-795 + TAAAATCAAGG-------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGTACAAAATC-------------------TATGATATCAAATTTAAA----TG---------------------A------G---TAAGCGGCGTTTTTTTGCAT--TTT-------------T--TAA-----------------------------------------------------------------ATA-AATG----------------------------------------------TTTATAGTTTATTGTTATTTAAAGCAAGTGTCATA-----------------------------------------------TGGAGATAATAAATATTTTCTAT
droTak1 scf7180000415764:69030-69271 + TGTTAAAGAAA-------CGT-C-ATCAATTATTTGCCAGTGATCGAGTGCGTCAGACGATTAAGG--------CCAGTCTGGTGGAGTTTGATAAGCAGGGTATTTTGGAAACCCCTTGA-------AA--------------------------------------------------------------------ACA---------------------AC--------------------------------------------------------------------------------------------------------------CAAATT------------TTTCAATT--TAATTGAT------TTCTAAAAACGTATTATCTCGTTGAAGTAT---GCTATACCAGTATTTTGTACAGAA------------------------------------------------------------------------------------------------TAAA---CTGTTTTCCATATTGAATAT------GTTTGCTCTTACTCAAAAAAA-------------GGACTACCCA
droEug1 scf7180000408888:30955-31194 + TCTCGAAAACT-------ATAAGAGCTAAA-----------A------------------------------------------------------------------------------------------------------------------------------AGTTAGGTTTAGGAAAATGAATATTAGA-GATGCCATTGCAGCTCCCGCCAC--------GTAACGTGCCA-------TTGCAACTCCCACAAACCGCGGAAAACTGTAGCGTCCATAATATTATA-----A----TG---------------------A------A---T-----GTGTTCGTTTGCAC--TTG-------------T---------------------------------------------------------------------------------ATAACA-----------------------------------TTTTTTTTGTCAATAGCTATCTATT---TACCAA---AGATTTTTCAAATCGGACATTATTTTGCTC------------GCTTT-------------TGCCCCTCGC
dm3 chr3L:18108757-18108861 + TGTTAAAAAAG-------CGA-C-ACCAATTATTCGCCAGCGAACGAGTGCGTCAAACCATAAAGG--------CCACTCTGCTTATGTTCGATCGTGAGGGTATATTAGAGACGCCCTAA-------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:17663519-17663624 + TGTTAAAGAAG-------CGA-C-ACCAACTATTCGCCAACGAACGAGTGCGTCAAACCATAAAGT--------CCACTCTGCTTATGTTGGATAGTGAGGGTATATTAGAAACCCCCTAA-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_19:104636-104741 + TGTTAAAGAAG-------CGA-C-ACCAACTATTCGCCAACGAACGAGTGCGTCAAACCATAAAGT--------CCACTCTGCTTATGTTGGATAGTGAGGGTATATTAGAAACCCCCTAA-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:15946584-15946823 - TGTTAAAAAAG-------CGC-C-ACCAATTATTCGCCAGCGAACGAGTGCGTCAGACCATAAAGG--------CCACTCTGCCTATGTTGGATCGGGAGGGTATATTAGAAACCCCCTAA-------AG--------------------------------------------------------------------AAG---------------------CTCCTCTTTATACC-------------------------------------------------------------------------------------------------------------------------------------T------TGTTAT-----------TTTATTACAGTGTTTGGTCTTGTCAGTATTTTCTATGGAAAGCGGTTTTTTTAATTA-GTTTTTCGAA--------------------------------------TT----------------TTT----TTAAACAT----CACTTAAAAAAAGCAA--------------------------ATAG--------------CATTCTTACA
droEre2 scaffold_4784:15780956-15781060 - TGTTACAAAAG-------CGC-C-ACCAATTATTCGCCAGCGAACGAGTTCGTCAGACCATAAAGG--------CCACGCTGCCTATGTTGGATCAGGAGGGTATACTAGAAACCCCCTAA-------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGCTTAAAAAG-------CGA-G-GACAATTGTTCAGTAATCCTCGTTTTTTGAAAACAGTGAGAG--------CCACATTGCCTATATTTCATGAGAAAGGTGTACTAGAGACTCCTTGA-------AA--------------------------------------------------------------------------------------------CTCCACGTAAAATCACA-------GTACACCATACAGAAAC-------------------TGAGGT------------------ATTAACATATCTGAGGTATTAA------G---TTAGCAG------------------------------------------------------------------------------------------CGATTTTTTTTATTA-GCTTTTTACAGCTTTTAATAA------------------TGGGATTA-----------------AA---------------------TTTGTCTTAATAAA--------------------------AATTT-------------GACTTCTTATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................ATGAGAAAGGTGTACTAGAGACTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00220000
.....................................................................................ATATTTCATGAGAAAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
......................................................................................................TGTACTAGAGACTCCTTGA-------AA--------------------------------------------------------------------------------------------C...............................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
..........................CAATTGTTCAGTAATCCTCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..................................................................................................................................................................................................................................................................................................................ATTAACATATCTGAGGTATTAA------G---T...........................................................................................................................................................................................................................................................................2411.00100100
..............................................................................ATTGCCTATATTTCATGAGAAAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAA------------------TGGGATTA-----------------AA---------------------TTTGTC..............................................................2111.00100100
........................................................................................................................................................................................................................................................ACACCATACAGAAAC-------------------TGAGGT------------------............................................................................................................................................................................................................................................................................................................2111.00100100
..........................................................................................................................................................................................................................................................ACCATACAGAAAC-------------------TGAGGT------------------............................................................................................................................................................................................................................................................................................................1911.00100100
................................................................................................................................................................................................................................CCACGTAAAATCACA-------GTACACC.................................................................................................................................................................................................................................................................................................................................................................2211.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTACAGCTTTTAATAA------------------TGGGAT..............................................................................................................2411.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------TGGGATTA-----------------AA---------------------TTTGTCTT............................................................2011.00100100
...........................................................................................CATGAGAAAGGTGTACTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAA------------------TGGGATTA-----------------AA---------------------TTTGT...............................................................2011.00100100
.........................................................................................................................................................................................................................................................CACCATACAGAAAC-------------------TGAGGT------------------............................................................................................................................................................................................................................................................................................................2011.00100100
droVir3
AGATATTAATT-------T------------ATTTTTCAGTTAACTTTTGTCTTCAATA--------------------------------------------------------------------------------------TCGTTGTGTACGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGAAG------------------------------------T------------------CGTGTTCA-----------------TG---------------------TTAGTTTAAATGAA--------------------------AA---------------GTTTTTCTTAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CATA-CAGTGA-------CGA-A-CTAAATTATTGGCAC-AG--CAAGCTTTTTCAACTTTAAAG---------CAATTTTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTG-TTTTTTAACG--------------------------------------TT----------------TTTTTAGTTAAACAAA---AAATTTACTAAATAGAAT-------------------------TGT-------------GTATTTCTTAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................TAAATTATTGGCAC-AG--CAAGCTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25130.8511600050
.........................TAAATTATTGGCAC-AG--CAAGCTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24130.314200020
..........................AAATTATTGGCAC-AG--CAAGCTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.213300000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTTAAACAAA---AAATTTACT.............................................................2260.171100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAAATAGAAT-------------------------TGT-------------GTATTTC....2360.171100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTAAATAGAAT-------------------------TGT-------------GTATTTCTTT.2760.171100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAAATAGAAT-------------------------TGT-------------GTATTTCT...2460.171100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAAATAGAAT-------------------------TGT-------------GTATTTCTT..2560.171000010
.........................TAAATTATTGGCAC-AG--CAAGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23130.152000020
.........................TAAATTATTGGCAC-AG--CAAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.142000020
.........................TAAATTATTGGCAC-AG--CAAGCTTTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26130.081100000
.........................TAAATTATTGGCAC-AG--CAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071000010
..............................TATTGGCAC-AG--CAAGCTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.071100000
......................A-CTAAATTATTGGCAC-AG--CAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
...................GA-A-CTAAATTATTGGCAC-AG--CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
droGri2
TGCTGGAGAAA-------CGA-C-ATCAGCTCTTTGCCAGTGAACGAGTTCGGCAGACCCTACAGG--------CCACCTTGGGACACTTTGATCAGCAAGGCGTACTAAATATTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
CGGAACTGAAG-------CGT-C-GCCAGCTGTTTGCCAACGAGCGAGTGCGTCAGACGGTCAAAG--------TGTCACTGCTGGCATTCGATCAGCAGGGCATACTGGACACGCCCTAG-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................GGCATTCGATCAGCAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040400000000
..GAACTGAAG-------CGT-C-GCCAGCTGTTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
...........................................................GTCAAAG--------TGTCACTGCTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
....................................................................................GGCATTCGATCAGCAGGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
......................................................AGACGGTCAAAG--------TGTCACTGCTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................GACGGTCAAAG--------TGTCACTGCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................GGCATACTGGACACGCCCTAG-------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................GCATTCGATCAGCAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.........................................GAGCGAGTGCGTCAGACGGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.GGAACTGAAG-------CGT-C-GCCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........G-------CGT-C-GCCAGCTGTTTGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................ATTCGATCAGCAGGGCATACTGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.......................................................GACGGTCAAAG--------TGTCACTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................AGGGCATACTGGACACGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000000
......................................AACGAGCGAGTGCGTCAGACGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................................................................................ATTCGATCAGCAGGGCATACTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...AACTGAAG-------CGT-C-GCCAGCTGTTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
............................................................TCAAAG--------TGTCACTGCTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.................................................GCGTCAGACGGTCAAAG--------TGTCACTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
....................................................................................GGCATTCGATCAGCAGGGCATACTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........AG-------CGT-C-GCCAGCTGTTTGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
CGGAACTGAAG-------CGT-C-GTCAGCTGTTTGCCAACGAGCGAGTGCGTCAGACGGTCAAAG--------TGTCACTGCTGGCATTCGATCAGCAGGGCATACTGGACACGCCCTAG-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................GGCATTCGATCAGCAGGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004400000
.....................................CAACGAGCGAGTGCGTCAGACGGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.004400000
..GAACTGAAG-------CGT-C-GTCAGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
........................GTCAGCTGTTTGCCAACGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.......................................................................................................ATACTGGACACGCCCTAG-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2012.002200000
................................TTTGCCAACGAGCGAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..........................................................GGTCAAAG--------TGTCACTGCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................GTCAAAG--------TGTCACTGCTGGCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......................................................................................................ATACTGGACACGCCCTAG-------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................................................................................CGATCAGCAGGGCATACTGGACACGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....................................................................................GCATTCGATCAGCAGGGCATACTGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......TGAAG-------CGT-C-GTCAGCTGTTTGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.....................................................................................GCATTCGATCAGCAGGGCATACTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................................CAACGAGCGAGTGCGTCAGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...................................................GTCAGACGGTCAAAG--------TGTCACTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.....CTGAAG-------CGT-C-GTCAGCTGTTTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................CAAAG--------TGTCACTGCTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droAna3
TTTTTAAAACC-------ACA-A-GTTAAC-----------ACGTAAAGCACTTGGACCACAAAAATTGAAAATTTTATATATTTACGTTACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------ACCCACAT--GTTTTATTCCTGGTTTA-------------------------------------------------------------------------------ATAATATTTAAAAA------------------GTAAAT-----------------ATAC---------------------CTTTTTTTA--CGA--------------------------AATTT-------------AATTGCATATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................TACGTTACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------ACCCACAT--GTTTTAT.............................................................................................................................................................................................................................................2690.111100000
.TTTTAAAACC-------ACA-A-GTTAAC-----------ACGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25130.081100000
....................................................................GAAAATTTTATATATTTACGTTACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T...........................................................................................................................................................................................................................................................................26140.071000010
droBip1
AAATTAAA-AG-------TAA-T-ATCAATATATAGCATATAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATCGA-----------------------------------------------------TT-----ACG--------GAAACATGTGAAATAAACTCTT---G---------ATTTACTT--TTCTTATT------TTTAAA-------------------------------------------------------------------------------AAATTTAAAAACTACCTCAATTACAGCACCGCCTTTG-----------------GG---------------------TTTATTTTAAGCAA--------------------------ATCTT-------------AACTGATTAASizeHit CountTotal NormTotal
No Reads
droKik1
CATGTAAAATC-------GTGTA-GTTAAC-----AAAGAGAAGCGAATGTAAAAAATTGTCGGAG--------CATTTGCACTAAAGCCGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT------------ATTTATTT--TTTTTACT------CATTAA----------------------------------------------------------------------------------------------------------------------------------------------CTAAATGT----AATTTAAATAAATAAG--------------------------ATAT-------------ATATTTAGCATSizeHit CountTotal NormTotal
No Reads
droFic1
TTTTCGAAAAC-------AGACT-GACAA--CCTGA-------------------------------------------AACCTTATATTTTTTATAAAGTCTGGACTTTAAATTCCTAAGGTGTGTCAACTCTTTGCTAAACCAAGGTTGTTTATTGGATGTTGACGGGTTATATTTCGGAACAAACGAGTTAAAAAAAATTATAATGGCGTCTTCCATATTGCCAG------------------ATATAAGTTGATTAAGTCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGA--------------------------AAGTT-------------AGCCCTTCGASizeHit CountTotal NormTotal
No Reads
droEle1
CATTAGAAGGG-------AGT-A-GTGGAGTCATCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTCTGATTAA--------ATAGTGGCCACTCATCGG-----------------------------------------------------TTACA--CCA--------GAAAATTGTGGTAGGTATTTCA---G---------ATTCATCT--TTCATCTA------TGTTAT-------------------------------------------------------------------------------GAACTTAAGTTATTTTTCTGTGTTAACATCTCGTATTGTC----------------TTTTTAGTCGTACAGCTAA-----------------------------------------------CGTATTTATTTCATTTTGATTATSizeHit CountTotal NormTotal
No Reads
droRho1
AATCACCTTTTTTCGAGGTGC-A-GCCGGAGA-----------------------------------------------TTGCTTATATCTCACTCA-----------------------------------------------------------------------------------AAG------------CAAAAATTATACTGAGACTATTCGTATCGCCAATAAA-----------------AATCGTAAAAAATG-------------------CAGAGAATTAAACATAAG----GA-AAACCATTTTCAAATTATAAT------A---TTAAAAG------------------------------------------------------------------------------------------CTCTTAAATCGTTCAGAATT----------------------------------------------TTGATAGCTCACTTTTA-------------------------AAAC------------------------------------CGAAAATGATAAAA---ATTCATSizeHit CountTotal NormTotal
No Reads
droBia1
TAAAATCAAGG-------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGTACAAAATC-------------------TATGATATCAAATTTAAA----TG---------------------A------G---TAAGCGGCGTTTTTTTGCAT--TTT-------------T--TAA-----------------------------------------------------------------ATA-AATG----------------------------------------------TTTATAGTTTATTGTTATTTAAAGCAAGTGTCATA-----------------------------------------------TGGAGATAATAAATATTTTCTATSizeHit CountTotal NormTotal
No Reads
droTak1
TGTTAAAGAAA-------CGT-C-ATCAATTATTTGCCAGTGATCGAGTGCGTCAGACGATTAAGG--------CCAGTCTGGTGGAGTTTGATAAGCAGGGTATTTTGGAAACCCCTTGA-------AA--------------------------------------------------------------------ACA---------------------AC--------------------------------------------------------------------------------------------------------------CAAATT------------TTTCAATT--TAATTGAT------TTCTAAAAACGTATTATCTCGTTGAAGTAT---GCTATACCAGTATTTTGTACAGAA------------------------------------------------------------------------------------------------TAAA---CTGTTTTCCATATTGAATAT------GTTTGCTCTTACTCAAAAAAA-------------GGACTACCCASizeHit CountTotal NormTotal
No Reads
droEug1
TCTCGAAAACT-------ATAAGAGCTAAA-----------A------------------------------------------------------------------------------------------------------------------------------AGTTAGGTTTAGGAAAATGAATATTAGA-GATGCCATTGCAGCTCCCGCCAC--------GTAACGTGCCA-------TTGCAACTCCCACAAACCGCGGAAAACTGTAGCGTCCATAATATTATA-----A----TG---------------------A------A---T-----GTGTTCGTTTGCAC--TTG-------------T---------------------------------------------------------------------------------ATAACA-----------------------------------TTTTTTTTGTCAATAGCTATCTATT---TACCAA---AGATTTTTCAAATCGGACATTATTTTGCTC------------GCTTT-------------TGCCCCTCGCSizeHit CountTotal NormTotal
No Reads
dm3
TGTTAAAAAAG-------CGA-C-ACCAATTATTCGCCAGCGAACGAGTGCGTCAAACCATAAAGG--------CCACTCTGCTTATGTTCGATCGTGAGGGTATATTAGAGACGCCCTAA-------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................AACGAGTGCGTCAAACCATAAAGG--------CCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TATTCGCCAGCGAACGAGTGCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001100000
......................................................................................TGTTCGATCGTGAGGGTATATTAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000010001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TATGTTCGATCGTGAGGGTATATTAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CGCCAGCGAACGAGTGCGTCAAACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................CTGCTTATGTTCGATCGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TCGTGAGGGTATATTAGAGACGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................GAACGAGTGCGTCAAACCATAAAGG--------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000
..............................TATTCGCCAGCGAACGAGTGCGTCAAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTATTCGCCAGCGAACGAGTGCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................CACTCTGCTTATGTTCGATCGTGAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................TGTTCGATCGTGAGGGTATATTAGAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................TCGTGAGGGTATATTAGAGACGCCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................TATTCGCCAGCGAACGAGTGCGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAATTATTCGCCAGCGAACGAGTGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TATGTTCGATCGTGAGGGTATATTAGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................GCCAGCGAACGAGTGCGTCAAACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................TGAGGGTATATTAGAGACGCCCTAA-------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CTGCTTATGTTCGATCGTGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAATTATTCGCCAGCGAACGAGTGCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CGATCGTGAGGGTATATTAGAGACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GTGAGGGTATATTAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AAACCATAAAGG--------CCACTCTGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TGTTCGATCGTGAGGGTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AAGG--------CCACTCTGCTTATGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TTATGTTCGATCGTGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................ACCAATTATTCGCCAGCGAACGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TCGTGAGGGTATATTAGAGACGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AGCGAACGAGTGCGTCAAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................GATCGTGAGGGTATATTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................CTGCTTATGTTCGATCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CAAACCATAAAGG--------CCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TTCGATCGTGAGGGTATATTAGAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................ATTCGCCAGCGAACGAGTGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..............................................AGTGCGTCAAACCATAAAGG--------CC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CGCCAGCGAACGAGTGCGTCAAACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................GCCAGCGAACGAGTGCGTCAAACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................GCTTATGTTCGATCGTGAGGGTATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................TAAAGG--------CCACTCTGCTTATGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GAGGGTATATTAGAGACGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TAAAAAAG-------CGA-C-ACCAATTATTCGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CCAATTATTCGCCAGCGAACGAGTGCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGTTAAAGAAG-------CGA-C-ACCAACTATTCGCCAACGAACGAGTGCGTCAAACCATAAAGT--------CCACTCTGCTTATGTTGGATAGTGAGGGTATATTAGAAACCCCCTAA-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................TGCGTCAAACCATAAAGT--------CCACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..............................................................................TCTGCTTATGTTGGATAGTGAGGGTATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
........................................................................................TTGGATAGTGAGGGTATATTAGAAACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
droSec2
TGTTAAAGAAG-------CGA-C-ACCAACTATTCGCCAACGAACGAGTGCGTCAAACCATAAAGT--------CCACTCTGCTTATGTTGGATAGTGAGGGTATATTAGAAACCCCCTAA-------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................CTGCTTATGTTGGATAGTGAGGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020020
droYak3
TGTTAAAAAAG-------CGC-C-ACCAATTATTCGCCAGCGAACGAGTGCGTCAGACCATAAAGG--------CCACTCTGCCTATGTTGGATCGGGAGGGTATATTAGAAACCCCCTAA-------AG--------------------------------------------------------------------AAG---------------------CTCCTCTTTATACC-------------------------------------------------------------------------------------------------------------------------------------T------TGTTAT-----------TTTATTACAGTGTTTGGTCTTGTCAGTATTTTCTATGGAAAGCGGTTTTTTTAATTA-GTTTTTCGAA--------------------------------------TT----------------TTT----TTAAACAT----CACTTAAAAAAAGCAA--------------------------ATAG--------------CATTCTTACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................TAAAGG--------CCACTCTGCCTATGTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24210.0020000000000020
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTGTCAGTATTTTCTATGGAAA............................................................................................................................................................................2511.00101000000000
....................................CCAGCGAACGAGTGCGTCAGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110000000000
........................................CGAACGAGTGCGTCAGACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110000000000
....................................CCAGCGAACGAGTGCGTCAGACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100100000000
.....................................CAGCGAACGAGTGCGTCAGACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
.......................................GCGAACGAGTGCGTCAGACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000010000
droEre2
TGTTACAAAAG-------CGC-C-ACCAATTATTCGCCAGCGAACGAGTTCGTCAGACCATAAAGG--------CCACGCTGCCTATGTTGGATCAGGAGGGTATACTAGAAACCCCCTAA-------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........AG-------CGC-C-ACCAATTATTCGCCAGCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
................................................................................TGCCTATGTTGGATCAGGAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
...........................AATTATTCGCCAGCGAACGAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100

Generated: 05/18/2015 at 03:02 AM