ID:

dwi_1965

 Coordinate:

scf2_1100000004752:1490-1640 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.6 -15.3 -15.3 -15.1

Flybase annnotation

CDS [Dwil\GK12715-cds]; exon [dwil_GLEANR_13050:1]; intron [Dwil\GK12715-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. scf2_1100000004521:12320655-12320678 -
  2. dwi_1965  scf2_1100000004752:1550-1573 -
star
  1. scf2_1100000004521:12320601-12320625 -
  2. dwi_1965  scf2_1100000004752:1496-1520 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTCCGGATACGCCGGAGGCCCTCTTTGAGGACATGCTAATGTATACGGAGGTGAGTATGAAGGAAAGTGAATTTTTTTATTTTATTATTTAAAGTTTCTAATTAAATATTTTTTCTCCTCCATTACAATTGCAGGAAGAAGTCCTGCATGCATTGCCAAGGCAATCCGTGATAAATTTCAAGTTTCAAAAAAGTTTAATTTGCGAGTTGCGGTATTATATTATTATTTAAACGTCAGTGTTTTTAATTTTA
*********************************************************************************************************************.........((((....((((((((....((((.(((((....))))).))))....)))))....)))....)).))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 V119
head
.....................................................................................................................CTCCATTACAATTGCAGGAAGAAG.............................................................................................................. 24 0 2 4.00 8 5 1 0 2
.................................TGCTAATGTATACGGAGGTGAGT................................................................................................................................................................................................... 23 0 2 1.50 3 2 0 1 0
...................................................................................................................................................................................AAGTTTCAAAAAAGTTTAATTTG................................................. 23 0 2 1.00 2 2 0 0 0
...........................................................................................................................TACAATTGCAGGAAGAAGTCCTG......................................................................................................... 23 0 2 1.00 2 0 2 0 0
.........................TGAGGACATGCTAATGTATACGGA.......................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
.................................TGCTAATGTATACGGAGGTGAGTATGA............................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
......................................................................................................................TCCATTACAATTGCAGGAAGAAG.............................................................................................................. 23 0 2 0.50 1 1 0 0 0
...................................CTAATGTATACGGAGGTGAGTA.................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0
.....................................................................................................................CTCCATTACAATTGCAGGAAGAAGTCC........................................................................................................... 27 0 2 0.50 1 0 0 1 0
.....................................................................................................................CTCCATTACAATTGCAGGAAGAAGT............................................................................................................. 25 0 2 0.50 1 1 0 0 0
.................................TGCTAATGTATACGGAGGTG...................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
..................................GCTAATGTATACGGAGGTGA..................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
.................................TGCTAATGTATACGGAGGTGAGTAT................................................................................................................................................................................................. 25 0 2 0.50 1 0 1 0 0
.................................TGCTAATGTATACGGAGGTGAGTA.................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................................................................TGCGGTATTATATTATTATTTAAACG.................. 26 0 2 0.50 1 0 1 0 0
............................GGACATGCTAATGTATACGGAGG........................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0
.......TACGCCGGAGGCCCTCTTTGAGGACAT......................................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0
...................................CTAATGTATACGGAGGTGAGT................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0
...................................CTAATGTATACGGAGGTGAGTAT................................................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0
..........................................................................................................................................................................ATAAATTTCAAGTTTCAAAAAAGTT........................................................ 25 0 2 0.50 1 1 0 0 0
...................................................TGAGTATGAAGGAAAGTGAATTTT................................................................................................................................................................................ 24 0 3 0.33 1 0 1 0 0
...................................................TGAGTATGAAGGAAAGTGAATTTTT............................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0
....................................TAATGTATACGGAGGTGAGTATGAAG............................................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0
.......................................................TATGAAGGAAAGTGAATTTTTTTATT.......................................................................................................................................................................... 26 0 3 0.33 1 0 1 0 0
............................................................AGGAAAGTGAATTTTTTTATTTTA....................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0
..................................................GTGAGTATGAAGGAAAGTGAATTT................................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0
.........................................................TGAAGGAAAGTGAATTTTTTTATTTT........................................................................................................................................................................ 26 0 3 0.33 1 0 1 0 0
......................................................GTATGAAGGAAAGTGAATTTTT............................................................................................................................................................................... 22 0 3 0.33 1 0 1 0 0
...........................................................................................................................TACAATTGCAGGAAGAAA.............................................................................................................. 18 1 4 0.25 1 1 0 0 0

Anti-sense strand reads

AAGGCCTATGCGGCCTCCGGGAGAAACTCCTGTACGATTACATATGCCTCCACTCATACTTCCTTTCACTTAAAAAAATAAAATAATAAATTTCAAAGATTAATTTATAAAAAAGAGGAGGTAATGTTAACGTCCTTCTTCAGGACGTACGTAACGGTTCCGTTAGGCACTATTTAAAGTTCAAAGTTTTTTCAAATTAAACGCTCAACGCCATAATATAATAATAAATTTGCAGTCACAAAAATTAAAAT
********************************************************.........((((....((((((((....((((.(((((....))))).))))....)))))....)))....)).))********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V117
male body		 M020
head
...........................................ATGCCTCCACTCATACTTCCTTTCACT..................................................................................................................................................................................... 27 0 3 34.00 102 94 8 0 0
.....................................................................................................................................CCTTCTTCAGGACGTACGTAACGGT............................................................................................. 25 0 2 32.50 65 65 0 0 0
.............................................GCCTCCACTCATACTTCCTTTCACT..................................................................................................................................................................................... 25 0 3 32.00 96 92 4 0 0
.................CGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 26 0 2 25.50 51 23 28 0 0
..................GGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 25 0 2 25.00 50 9 41 0 0
..GGCCTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 26 0 2 24.50 49 7 42 0 0
...................................................................................................................................................................TAGGCACTATTTAAAGTTCAAAGTTT.............................................................. 26 0 2 16.50 33 23 10 0 0
.................................ACGATTACATATGCCTCCACTCATACTT.............................................................................................................................................................................................. 28 0 2 16.00 32 30 2 0 0
..............................................................................................................................................................TCCGTTAGGCACTATTTAAAGTTCAAAGT................................................................ 29 0 2 14.50 29 27 0 0 2
.................................ACGATTACATATGCCTCCACTCATACT............................................................................................................................................................................................... 27 0 2 14.50 29 28 1 0 0
................CCGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 27 0 2 11.00 22 18 4 0 0
AAGGCCTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 28 0 2 11.00 22 6 16 0 0
...........GGCCTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 27 0 2 8.00 16 11 5 0 0
............................................................................................................AAAAAAGAGGAGGTAATGTTAACGT...................................................................................................................... 25 0 2 8.00 16 4 12 0 0
................CCGGGAGAAACTCCTGTACGATTACATAT.............................................................................................................................................................................................................. 29 0 2 7.50 15 9 6 0 0
............................................TGCCTCCACTCATACTTCCTTTCACT..................................................................................................................................................................................... 26 0 3 7.33 22 13 8 1 0
.......ATGCGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 26 0 2 6.00 12 7 5 0 0
...................................................................................................................................................................TAGGCACTATTTAAAGTTCAAAGTT............................................................... 25 0 2 6.00 12 10 2 0 0
............................CCTGTACGATTACATATGCCTCCACTCAT.................................................................................................................................................................................................. 29 0 2 6.00 12 12 0 0 0
......................................................................................................................................CTTCTTCAGGACGTACGTAACGGT............................................................................................. 24 0 2 6.00 12 11 1 0 0
.AGGCCTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 27 0 2 5.50 11 5 6 0 0
............GCCTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 26 0 2 5.50 11 5 6 0 0
.........................................................................................................................................CTTCAGGACGTACGTAACGGTTCCGT........................................................................................ 26 0 2 5.00 10 10 0 0 0
....CCTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 24 0 2 5.00 10 1 9 0 0
...............................................................................................................................................................................................TCAAATTAAACGCTCAACGCCATAATAT................................ 28 0 2 5.00 10 9 1 0 0
..................GGGAGAAACTCCTGTACGATTACATAT.............................................................................................................................................................................................................. 27 0 2 4.00 8 2 6 0 0
...........................................................................................................................................TCAGGACGTACGTAACGGTTCCGT........................................................................................ 24 0 2 4.00 8 6 2 0 0
.................CGGGAGAAACTCCTGTACGATTACATAT.............................................................................................................................................................................................................. 28 0 2 4.00 8 5 3 0 0
...........................................................................................................................................................GGTTCCGTTAGGCACTATTTAAAGT....................................................................... 25 0 2 4.00 8 4 4 0 0
..........................................................................................................................................TTCAGGACGTACGTAACGGTTCCGT........................................................................................ 25 0 2 4.00 8 8 0 0 0
.........GCGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 24 0 2 3.50 7 7 0 0 0
................................................................................................................................................................................................CAAATTAAACGCTCAACGCCATAATAT................................ 27 0 2 3.50 7 7 0 0 0
.....CTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 23 0 2 3.50 7 4 3 0 0
........................................................................................................................................TCTTCAGGACGTACGTAACGGTTCCGT........................................................................................ 27 0 2 3.50 7 7 0 0 0
...............TCCGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 28 0 2 3.50 7 6 1 0 0
..GGCCTATGCGGCCTCCGGGAGAAAC................................................................................................................................................................................................................................ 25 0 2 3.50 7 0 7 0 0
.....................................................................................................................................CCTTCTTCAGGACGTACGTAACGGTT............................................................................................ 26 0 2 3.50 7 7 0 0 0
....................GAGAAACTCCTGTACGATTACATAT.............................................................................................................................................................................................................. 25 0 2 3.50 7 4 3 0 0
....................................................................................................................................................ACGTAACGGTTCCGTTAGGCACTAT.............................................................................. 25 0 2 3.00 6 6 0 0 0
...................................................................................................................................GTCCTTCTTCAGGACGTACGTAACGGT............................................................................................. 27 0 2 3.00 6 5 1 0 0
...............................GTACGATTACATATGCCTCCACTCATACT............................................................................................................................................................................................... 29 0 2 3.00 6 6 0 0 0
....................................................................................................TAATTTATAAAAAAGAGGAGGTAATGT............................................................................................................................ 27 0 2 3.00 6 2 3 1 0
.........................................................................................................................................................................................................................ATAATAATAAATTTGCAGTCACAAAAAT...... 28 0 2 3.00 6 3 3 0 0
...........GGCCTCCGGGAGAAACTCCTGTACGA...................................................................................................................................................................................................................... 26 0 2 3.00 6 4 2 0 0
...............................................................................................................................................................................................TCAAATTAAACGCTCAACGCCATAAT.................................. 26 0 2 3.00 6 6 0 0 0
........................................................................................................................................................AACGGTTCCGTTAGGCACTATTTAAAGT....................................................................... 28 0 2 3.00 6 2 4 0 0
.................CGGGAGAAACTCCTGTACGATTACA................................................................................................................................................................................................................. 25 0 2 3.00 6 4 2 0 0
...........................................ATGCCTCCACTCATACTTCCTTTCAC...................................................................................................................................................................................... 26 0 3 2.67 8 7 1 0 0
......................................TACATATGCCTCCACTCATACTTCCTT.......................................................................................................................................................................................... 27 0 3 2.67 8 8 0 0 0
.......ATGCGGCCTCCGGGAGAAACTCCT............................................................................................................................................................................................................................ 24 0 2 2.50 5 5 0 0 0
..............................................................................................................................................................................................TTCAAATTAAACGCTCAACGCCATAATAT................................ 29 0 2 2.50 5 5 0 0 0
...GCCTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 25 0 2 2.50 5 4 1 0 0
....................................................................................................................................TCCTTCTTCAGGACGTACGTAACGGT............................................................................................. 26 0 2 2.50 5 5 0 0 0
...............................................................................................................................................................CCGTTAGGCACTATTTAAAGTTCAAAGT................................................................ 28 0 2 2.00 4 4 0 0 0
.........GCGGCCTCCGGGAGAAACTCCTG........................................................................................................................................................................................................................... 23 0 2 2.00 4 4 0 0 0
..........................................................................................................ATAAAAAAGAGGAGGTAATGTTAACGT...................................................................................................................... 27 0 2 2.00 4 0 4 0 0
..............CTCCGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 29 0 2 2.00 4 2 2 0 0
...........................................................................................................AAAAAAAGAGGAGGTAATGTTAACGT...................................................................................................................... 26 1 2 2.00 4 0 4 0 0
.........................................................................................................TATAAAAAAGAGGAGGTAATGTTAACGT...................................................................................................................... 28 0 2 2.00 4 4 0 0 0
..................................CGATTACATATGCCTCCACTCATACTT.............................................................................................................................................................................................. 27 0 2 2.00 4 4 0 0 0
..................................CGATTACATATGCCTCCACTCATACT............................................................................................................................................................................................... 26 0 2 2.00 4 4 0 0 0
........................................................................................................TTATAAAAAAGAGGAGGTAATGTT........................................................................................................................... 24 0 2 2.00 4 2 2 0 0
.....................................................................................................................................CCTTCTTCAGGACGTACGTAACGG.............................................................................................. 24 0 2 2.00 4 4 0 0 0
......................................................................................................................................CTTCTTCAGGACGTACGTAACGGTT............................................................................................ 25 0 2 2.00 4 4 0 0 0
..............CTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 24 0 2 2.00 4 4 0 0 0
...........................................ATGCCTCCACTCATACTTCCTTTCACTT.................................................................................................................................................................................... 28 0 3 1.67 5 5 0 0 0
.............................................GCCTCCACTCATACTTCCTTTCAC...................................................................................................................................................................................... 24 0 3 1.67 5 5 0 0 0
..............................TGTACGATTACATATGCCTCCACTCAT.................................................................................................................................................................................................. 27 0 2 1.50 3 3 0 0 0
...............TCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 23 0 2 1.50 3 2 1 0 0
..........CGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 23 0 2 1.50 3 3 0 0 0
.............................................................................................................................................................................TTAAAGTTCAAAGTTTTTTCAAAT...................................................... 24 0 2 1.50 3 3 0 0 0
............................CCTGTACGATTACATATGCCTCCACT..................................................................................................................................................................................................... 26 0 2 1.50 3 1 2 0 0
...............TCCGGGAGAAACTCCTGTACGATTACATAT.............................................................................................................................................................................................................. 30 0 2 1.50 3 0 3 0 0
........................................................................................................TTATAAAAAAGAGGAGGTAATGTTAA......................................................................................................................... 26 0 2 1.50 3 1 2 0 0
....................................................................................................TAATTTATAAAAAAGAGGAGGTAATG............................................................................................................................. 26 0 2 1.50 3 3 0 0 0
.....................................................................................................................................................................................................TAAACGCTCAACGCCATAATATAAT............................. 25 0 2 1.50 3 3 0 0 0
..................................................................................................................................AAACCTTCTTCAGGACGTACGTAACGGT............................................................................................. 28 3 2 1.50 3 3 0 0 0
.................................ACGATTACATATGCCTCCACTCATAC................................................................................................................................................................................................ 26 0 2 1.50 3 3 0 0 0
.................................................................................................................AGAGGAGGTAATGTTAACGTCCTTCT................................................................................................................ 26 0 2 1.50 3 2 1 0 0
.............CCTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 25 0 2 1.50 3 3 0 0 0
...............................................................................................................................................GACGTACGTAACGGTTCCGTTAGGCAC................................................................................. 27 0 2 1.50 3 3 0 0 0
........AGCGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 25 1 2 1.50 3 2 1 0 0
..............................................................................................................................................................................................TTCAAATTAAACGCTCAACGCCATAAT.................................. 27 0 2 1.50 3 3 0 0 0
........TGCGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 25 0 2 1.50 3 2 1 0 0
................CCGGGAGAAACTCCTGTACGATTACA................................................................................................................................................................................................................. 26 0 2 1.50 3 3 0 0 0
.............................................GCCTCCACTCATACTTCCTTTC........................................................................................................................................................................................ 22 0 3 1.33 4 4 0 0 0
...........................................ATGCCTCCACTCATACTTCCTT.......................................................................................................................................................................................... 22 0 3 1.33 4 3 1 0 0
...........................................................................................................................................................................................TTTTTCAAATTAAACGCTCAACGCCAT..................................... 27 0 2 1.00 2 2 0 0 0
...................GGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 24 0 2 1.00 2 0 2 0 0
..................................................................................................................................TGTCCTTCTTCAGGACGTACGTAACGGT............................................................................................. 28 1 2 1.00 2 2 0 0 0
..................GGGAGAAACTCCTTTACGATTACAT................................................................................................................................................................................................................ 25 1 2 1.00 2 0 2 0 0
..TGCCTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 26 1 2 1.00 2 0 2 0 0
..............................................................................................................................................GGACGTACGTAACGGTTCCGT........................................................................................ 21 0 2 1.00 2 0 2 0 0
......................................................................................................................................................................................................................AATATAATAATAAATTTGCAGTCACA........... 26 0 2 1.00 2 0 2 0 0
...................................................................................................................................................................TAGGCACTATTTAAAGTTCAAAGT................................................................ 24 0 2 1.00 2 2 0 0 0
.....................................................................................................................................................CGTAACGGTTCCGTTAGGCACTAT.............................................................................. 24 0 2 1.00 2 2 0 0 0
.......................................................................................................................................TTCTTCAGGACGTACGTAACGGT............................................................................................. 23 0 2 1.00 2 2 0 0 0
.........GCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 19 0 2 1.00 2 2 0 0 0
.TGGCCTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 27 1 2 1.00 2 0 2 0 0
.................................................................................................................................................................................................................................AAATTTGCAGTCACAAAAATTAAAAT 26 0 2 1.00 2 1 1 0 0
.......................................ACATATGCCTCCACTCATACTTCCTT.......................................................................................................................................................................................... 26 0 3 1.00 3 3 0 0 0
.................................................................................................................AGAGGAGGTAATGTTAACGTCCTTCTT............................................................................................................... 27 0 2 1.00 2 0 2 0 0
...........................................................................................................TAAAAAAGAGGAGGTAATGT............................................................................................................................ 20 0 2 1.00 2 0 0 2 0
...........................................................................................................................................................................ATTTAAAGTTCAAAGTTTTTTCAAAT...................................................... 26 0 2 1.00 2 2 0 0 0
.........................................................................................................................................CTTCAGGACGTACGTAACGGTTCCGTT....................................................................................... 27 0 2 1.00 2 2 0 0 0
..............ATCCGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 29 1 2 1.00 2 0 2 0 0
.............................CTGTACGATTACATATGCCTCCACTCAT.................................................................................................................................................................................................. 28 0 2 1.00 2 2 0 0 0
.............................................................................................................................................................................................TTTCAAATTAAACGCTCAACGCCATAAT.................................. 28 0 2 1.00 2 2 0 0 0
......................................................................................................................................CTTCTTCAGGACGTACGTAACGG.............................................................................................. 23 0 2 1.00 2 2 0 0 0
...............TCCGGGAGAAACTCCTGTACGATTACA................................................................................................................................................................................................................. 27 0 2 1.00 2 1 1 0 0
......................................TACATATGCCTCCACTCATACTTCCT........................................................................................................................................................................................... 26 0 3 1.00 3 3 0 0 0
..........................................................................................................................................................CGGTTCCGTTAGGCACTATTTAAAGT....................................................................... 26 0 2 1.00 2 0 2 0 0
..................................................................................................................................CGTCCTTCTTCAGGACGTACGTAAC................................................................................................ 25 0 2 1.00 2 1 1 0 0
.............................................GCCTCCACTCATACTTCCTTTCACTT.................................................................................................................................................................................... 26 0 3 1.00 3 3 0 0 0
............................CCTGTACGATTACATATGCCTCCACTCA................................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0
........................................................................................................TATAAAAAAAGAGGAGGTAATGTTAACG....................................................................................................................... 28 3 2 1.00 2 0 2 0 0
..............................................................................................................................................................TCCGTTAGGCACTATTTAAAGTTCAAAG................................................................. 28 0 2 1.00 2 2 0 0 0
..............................................................................................................................................GGACGTACGTAACGGTTCCGTTAGGCAC................................................................................. 28 0 2 1.00 2 2 0 0 0
......TATGCGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 27 0 2 1.00 2 1 0 1 0
...............................GTACGATTACATATGCCTCCACTCAT.................................................................................................................................................................................................. 26 0 2 1.00 2 2 0 0 0
......................GAAACTCCTGTACGATTACATATGCCT.......................................................................................................................................................................................................... 27 0 2 1.00 2 2 0 0 0
...................................................................................................................................................................TAGGCACTATTTAAAGTTCAAAGTTTT............................................................. 27 0 2 1.00 2 1 1 0 0
...........................................................................................................TAAAAAAGAGGAGGTAATGTTAACGT...................................................................................................................... 26 0 2 1.00 2 0 2 0 0
.....................................................................................................................................................CGTAACGGTTCCGTTAGGCACTATT............................................................................. 25 0 2 1.00 2 2 0 0 0
................................................................................................................................................................CGTTAGGCACTATTTAAAGTTCAAAGTT............................................................... 28 0 2 1.00 2 0 2 0 0
..................................................................................................................................CGTCCTTCTTCAGGACGTACGTAACGGT............................................................................................. 28 0 2 1.00 2 2 0 0 0
...............................................................................AAAATAATAAATTTCAAAGATTAAT................................................................................................................................................... 25 0 3 0.67 2 2 0 0 0
...........................................ATGCCTCCACTCATACTTCCTTTC........................................................................................................................................................................................ 24 0 3 0.67 2 2 0 0 0
......................................TACATATGCCTCCACTCATACTT.............................................................................................................................................................................................. 23 0 3 0.67 2 2 0 0 0
...........................................ATGCCTCCACTCATACTTC............................................................................................................................................................................................. 19 0 3 0.67 2 2 0 0 0
.......................................................................AAAAAAATAAAATAATAAATTTCAAAGAT....................................................................................................................................................... 29 0 3 0.67 2 2 0 0 0
..............................................CCTCCACTCATACTTCCTTTCACT..................................................................................................................................................................................... 24 0 3 0.67 2 2 0 0 0
...................................................................................................................................................TACGTAACGGTTCCGTTAGGCAC................................................................................. 23 0 2 0.50 1 1 0 0 0
.ATGCCTATGCGGCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 27 1 2 0.50 1 0 1 0 0
..........................................................................................................................................................................................TTTTTTCAAATTAAACGCTCAACGCCAT..................................... 28 0 2 0.50 1 1 0 0 0
.................CGGGAGAAACTCCTGTACGATTACACAT.............................................................................................................................................................................................................. 28 1 2 0.50 1 0 1 0 0
.................................................................................................................................................................GTTAGGCACTATTTAAAGTTCAAAGTT............................................................... 27 0 2 0.50 1 1 0 0 0
.....................................................................................................................................................CGTAACGGTTCCGTTAGGCACTA............................................................................... 23 0 2 0.50 1 1 0 0 0
........................................................................................................................................TCTTCAGGACGTACGTAACGG.............................................................................................. 21 0 2 0.50 1 1 0 0 0
.................................................................................................................................................CGTACGTAACGGTTCCGTTAGGCAC................................................................................. 25 0 2 0.50 1 1 0 0 0
.....................................................................................................................................................................GGCACTATTTAAAGTTCAAAGTTT.............................................................. 24 0 2 0.50 1 1 0 0 0
.................CGGGAGAAACTCCTGTACGATTACATA............................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
..............................................................................................................................................................................................................................AATAAATTTGCAGTCACAAAAATTAAAA. 28 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................AAACGGTTCCGTTAGGCACTATTTAAAGT....................................................................... 29 1 2 0.50 1 0 1 0 0
..............................................................................................................................................................TCCGTTAGGCACTATTTAAAGTTCA.................................................................... 25 0 2 0.50 1 0 1 0 0
.............................................................................................................................................................................TTAAAGTTCAAAGTTTTTTCAAATT..................................................... 25 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................................CCATAATATAATAATAAATTTGCAG................ 25 0 2 0.50 1 1 0 0 0
..................................................................................................................................TATCCTTCTTCAGGACGTACGTAACGGT............................................................................................. 28 2 2 0.50 1 0 1 0 0
......TATGCGGCCTCCGGGAGAAACTCCT............................................................................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0
..........................................................................................................................................................................................................GCTCAACGCCATAATATAATAATAAAT...................... 27 0 2 0.50 1 1 0 0 0
...................................................................................................................................ATCCTTCTTCAGGACGTACGTAACGGTT............................................................................................ 28 1 2 0.50 1 0 1 0 0
.......................................................................................................................GGTAATGTTAACGTCCTTCTTCAGGA.......................................................................................................... 26 0 2 0.50 1 1 0 0 0
.......ATGCGGCCTCCGGGAGAAACTCCTGTAC........................................................................................................................................................................................................................ 28 0 2 0.50 1 0 1 0 0
...................................................................................................................................CACCTTCTTCAGGACGTACGTAACGGT............................................................................................. 27 2 2 0.50 1 1 0 0 0
..............CTCCGGGAGAAACTCATGTACGATTACAT................................................................................................................................................................................................................ 29 1 2 0.50 1 0 1 0 0
.............................................................................................................................................................................TTAAAGTTCAAAGTTTTTTCAAA....................................................... 23 0 2 0.50 1 1 0 0 0
...............................GTACGATTACATATGCCTCCACT..................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
...........GGCCTCCGGGAGAAACTCCTGTACGATT.................................................................................................................................................................................................................... 28 0 2 0.50 1 0 1 0 0
...............CCCGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 28 1 2 0.50 1 1 0 0 0
.............................................................................................................AAAAAGAGGAGGTAATGT............................................................................................................................ 18 0 2 0.50 1 1 0 0 0
...........GGCCTCCGGGAGAAACTCCTGTAAGAT..................................................................................................................................................................................................................... 27 1 2 0.50 1 0 1 0 0
..............................................................................................................................................................TCCGTTCGGCACTATTTAAAGTTCAAAGT................................................................ 29 1 2 0.50 1 0 0 0 1
..................................................................................................................................ATTCCTTCTTCAGGACGTACGTAACGGT............................................................................................. 28 2 2 0.50 1 1 0 0 0
...............................GTACGATTACATATGCCTCCACTCATA................................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0
....................................................................................................................................ACCTTCTTCAGGACGTACGTAACGGT............................................................................................. 26 1 2 0.50 1 1 0 0 0
.................AGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 26 1 2 0.50 1 0 1 0 0
.................................................................................................................................................CGTACGTAACGGTTCCGTTAGGCACTAT.............................................................................. 28 0 2 0.50 1 1 0 0 0
.........GCGGCCTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 29 0 2 0.50 1 0 1 0 0
...............................GTACGATTACATAGGTCTC......................................................................................................................................................................................................... 19 2 4 0.50 2 2 0 0 0
.....................................................................................................................................................AATAACGGTTCCGTTAGGCACTATTTA........................................................................... 27 2 2 0.50 1 1 0 0 0
..................................................................................................................................TATCCTTCTTCAGGACGTACGTAACGG.............................................................................................. 27 2 2 0.50 1 1 0 0 0
........................................................................................................................................................................................................ACGCTCAACGCCATAATAT................................ 19 0 2 0.50 1 1 0 0 0
...........................................................................................................AAAAAAAGAGGAGGTAATGTTAA......................................................................................................................... 23 1 2 0.50 1 0 1 0 0
.............................................................................................................................................AGGACGTACGTAACGGTT............................................................................................ 18 0 2 0.50 1 0 1 0 0
..................................................................................................................................CATCCTTCTTCAGGACGTACGTAACGGT............................................................................................. 28 1 2 0.50 1 1 0 0 0
.......GTGCGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0
............................................................................................................................................................................................................TCAACGCCATAATATAATAATAAATT..................... 26 0 2 0.50 1 1 0 0 0
.........................................................................................................................................................................CTATTTAAAGTTCAAAGTTTTTTCAAAT...................................................... 28 0 2 0.50 1 1 0 0 0
...........................................................................................................................................TCAGGACGTACGTAACGG.............................................................................................. 18 0 2 0.50 1 1 0 0 0
.....................................................................................................................................................................................................TAAACGCCCAACGCCATAATATAAT............................. 25 1 2 0.50 1 1 0 0 0
.....................................................................................................................................................................................................TAAACGCTCAACGCCATAATATAA.............................. 24 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................CCGTTAGGCACTATTTAAAGTTCAAAG................................................................. 27 0 2 0.50 1 1 0 0 0
..................GGGAGAAACTCCTGTAAGATTACATAT.............................................................................................................................................................................................................. 27 1 2 0.50 1 0 1 0 0
.........GCGGCCTCCGGGAGAAACTCCTGTAC........................................................................................................................................................................................................................ 26 0 2 0.50 1 1 0 0 0
................CCGGGAGAAACTCCTGTACGATTACATAC.............................................................................................................................................................................................................. 29 1 2 0.50 1 1 0 0 0
............................................................................................................AAAAAAGAGAAGGTAATGTTAACGT...................................................................................................................... 25 1 2 0.50 1 0 1 0 0
................CCGGGAGAAACTCCTGTACG....................................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
...........GGCCTCCGGGAGAAACTCCTGTAC........................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0
.....................................................................................................................................................................................................TAAACGCTCAACGCCATAATATAATAA........................... 27 0 2 0.50 1 1 0 0 0
.................................................................................................................AGAGGAGGTAATGTTAACG....................................................................................................................... 19 0 2 0.50 1 1 0 0 0
...............................................................................................................................TAACGTCCTTCTTCAGGACGTACGTAAC................................................................................................ 28 0 2 0.50 1 0 1 0 0
.................................................................................................................................................................GTTAGGCACTATTTAAAGTTCAAAGTTT.............................................................. 28 0 2 0.50 1 1 0 0 0
.........................................................................................................TATAAGAAAGAGGAGGTAATGTTAACGT...................................................................................................................... 28 1 2 0.50 1 0 1 0 0
...............................................................................................................................................................CCGTTAGGCACTATTTAAAGTTCAAA.................................................................. 26 0 2 0.50 1 1 0 0 0
..............TTCCGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 29 1 2 0.50 1 1 0 0 0
.........................................................................................................TATAAAAAAGAGGAGGTAATGT............................................................................................................................ 22 0 2 0.50 1 0 1 0 0
.......ATGCGGCCTCCGGTAGAAACTCCTGT.......................................................................................................................................................................................................................... 26 1 2 0.50 1 0 1 0 0
.........................................................................................................................................CTTCAGGACGTACGTAACGGTTCCT......................................................................................... 25 1 2 0.50 1 1 0 0 0
....................................................................................................TAATTTATAAAAAAGAGGAGGTAAT.............................................................................................................................. 25 0 2 0.50 1 1 0 0 0
.......ATGCGGCCTCCGGGAGAAACTCCTG........................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
..........................................................................................................ATAAAAAAGAGGAGGTAATGTTAACG....................................................................................................................... 26 0 2 0.50 1 0 1 0 0
........................................................................................................TTATAAAAAAGAGGAGGTAATGTTAAC........................................................................................................................ 27 0 2 0.50 1 0 1 0 0
...............................................................................................................................................................CCGTTAGGCACTATTTAAAGTTCAAAGTT............................................................... 29 0 2 0.50 1 1 0 0 0
..........................................................................................................................................................CGGTTCCGTTAGGCACTATTTAAAGTT...................................................................... 27 0 2 0.50 1 1 0 0 0
........................................................................................................................................TCTTCAGGACGTACGTAACGGTTCCTT........................................................................................ 27 1 2 0.50 1 1 0 0 0
........................................................................................................TTATAAAAAAGAGGAGGTAATGTTAACGT...................................................................................................................... 29 0 2 0.50 1 0 0 1 0
.....................................................................................................................................CCTTCTTCAGGACGTACGTAACGGTTCC.......................................................................................... 28 0 2 0.50 1 1 0 0 0
..GGCCTATGCGGCCCCCGGGAGAAACT............................................................................................................................................................................................................................... 26 1 2 0.50 1 0 1 0 0
.................CGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 21 0 2 0.50 1 0 1 0 0
.......................................................................................................................GGTAATGTTAACGTCCTTCTTCAG............................................................................................................ 24 0 2 0.50 1 1 0 0 0
.................................................................................................................AGAGGAGGTAATGTTAACGTCCTTC................................................................................................................. 25 0 2 0.50 1 1 0 0 0
..................................................................................................................................CGTCCTTCTTCAGGACGTACGT................................................................................................... 22 0 2 0.50 1 1 0 0 0
............................................................................................................................................................................................................TCAACGCCATAATATAATA............................ 19 0 2 0.50 1 0 1 0 0
..................GGGAGAAACTCCTGTACGATTACA................................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0
.......................AAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 20 0 2 0.50 1 1 0 0 0
.............................................................................................................AAAAAGAGGAGGTAATGTTAACGTCCT................................................................................................................... 27 0 2 0.50 1 0 0 1 0
...................................................................................................................................GTCCTTCTTCAGGACGTA...................................................................................................... 18 0 2 0.50 1 1 0 0 0
..................................................................................................................................................................................................AATTAAACGCTCAACGCCATAATAT................................ 25 0 2 0.50 1 1 0 0 0
.........................ACTCCTGTACGATTACATATGCCT.......................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
.................CGGGAGAAACTCCTGTACTATTACAT................................................................................................................................................................................................................ 26 1 2 0.50 1 1 0 0 0
..........................................................................................................................................................................................................GCTCATCGCCGTAATATA............................... 18 2 2 0.50 1 1 0 0 0
...................................................................................................................................AACCTTCTTCAGGACGTACGTAACGGT............................................................................................. 27 2 2 0.50 1 0 1 0 0
..........................................................................................................................................................................TATTTAAAGTTCAAAGTTTTTTCAAAT...................................................... 27 0 2 0.50 1 1 0 0 0
...........................................................................................................AAAAAAAGAGGAGGTAACGTTAACGT...................................................................................................................... 26 2 2 0.50 1 0 1 0 0
..................GGGAGAAAGTCCTGTACGATTACAT................................................................................................................................................................................................................ 25 1 2 0.50 1 0 1 0 0
..........CTGCCTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 28 1 2 0.50 1 0 1 0 0
..........................................................................................................................................TTCAGGACGTACGTAACGGTTCCG......................................................................................... 24 0 2 0.50 1 1 0 0 0
AAGGCCTATGCGGCCTCCGGGAGA................................................................................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0
..............................................................................................................................................................TCCGTTAGGCACTATTTAAAGTTC..................................................................... 24 0 2 0.50 1 1 0 0 0
...........................................................................................................................................TCAGGACGTACGGAACGGTTCCGT........................................................................................ 24 1 2 0.50 1 1 0 0 0
..............TACCGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 29 2 2 0.50 1 0 1 0 0
....................................................................................................TAATTTATAAAAAAGAGGAGGTAATGTT........................................................................................................................... 28 0 2 0.50 1 1 0 0 0
.............TCTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 25 1 2 0.50 1 0 1 0 0
...................................................................................................................................GTCCTTCTTCAGGACGTACGTAACGGTT............................................................................................ 28 0 2 0.50 1 0 1 0 0
..................................CGATTACATATGCCTCCACTCATAC................................................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0
......................................................................................................................................................GTAACGGTTCCGTTAGGCACTAT.............................................................................. 23 0 2 0.50 1 1 0 0 0
.........................................................................................................................................CTTCAGGACGTACGTAACGGTTCCGTAG...................................................................................... 28 2 2 0.50 1 1 0 0 0
........................................................................................................................................TCTTCAGGACGTACGGAACGGTTCCGT........................................................................................ 27 1 2 0.50 1 1 0 0 0
...................................................................................................................................................................TAGGCACTATTTAAGGTTCAAAGTTT.............................................................. 26 1 2 0.50 1 1 0 0 0
..............CTCCGGGAGAAACTCCTGTACGATT.................................................................................................................................................................................................................... 25 0 2 0.50 1 0 1 0 0
...............................................................................................................................................................................................TCAAATTAAACGCTCAACGCCATAATA................................. 27 0 2 0.50 1 1 0 0 0
.................CGGGAGAAACTCCTGTACGATTAC.................................................................................................................................................................................................................. 24 0 2 0.50 1 0 1 0 0
........................................................................................................TTATAAAAAAGAGGAGGTAATGT............................................................................................................................ 23 0 2 0.50 1 1 0 0 0
..............ATCCGGGAGAAACTCCTGTACGATTACA................................................................................................................................................................................................................. 28 1 2 0.50 1 0 1 0 0
..GGCCTATGCGGCCTCCGGGAGAAA................................................................................................................................................................................................................................. 24 0 2 0.50 1 0 1 0 0
..........CGGCCTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 28 0 2 0.50 1 0 1 0 0
................................TACGATTACATATGCCTCCACTCATACTT.............................................................................................................................................................................................. 29 0 2 0.50 1 1 0 0 0
..................GGGAGAAACTCCTGTACGATTACATATG............................................................................................................................................................................................................. 28 0 2 0.50 1 0 1 0 0
........................................................................................................................................TCTTCAGGACGTACGTAACGGT............................................................................................. 22 0 2 0.50 1 1 0 0 0
.......ATGCGGCCTCCGGGAGAAA................................................................................................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0
...................................................................................................................................ATCCTTCTTCAGGACGTACGTAACGGT............................................................................................. 27 1 2 0.50 1 1 0 0 0
........................................................................................................TTATAAAAAAGAGGAGGTAATGTTAACG....................................................................................................................... 28 0 2 0.50 1 1 0 0 0
................................................................................................................................................................CGTTAGGCACTATTTAAAGTTCAAAGTTT.............................................................. 29 0 2 0.50 1 1 0 0 0
....................GAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0
...........................................................................................................................................TCAGGACGTACGTAACGGTTCC.......................................................................................... 22 0 2 0.50 1 1 0 0 0
...............................GTACGATTACATACGCCTCCACTCATACT............................................................................................................................................................................................... 29 1 2 0.50 1 1 0 0 0
................................AACGATTACATATGCCTCCACTCATACT............................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0
.................................................................................................................AGAGGAGGTAATGTTAACGTCCTT.................................................................................................................. 24 0 2 0.50 1 0 1 0 0
...........................................................................................................................................................GGTTCCGTTAGGCACTATTTAAAGTT...................................................................... 26 0 2 0.50 1 1 0 0 0
.............CCTCCGGGAGAAACTCCTGTACGATT.................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
..................GGGAGAAACTCCTGTACGATT.................................................................................................................................................................................................................... 21 0 2 0.50 1 0 1 0 0
........................................................................................................................................................................ACTATTTAAAGTTCAAAGTTT.............................................................. 21 0 2 0.50 1 1 0 0 0
........TGCGGCCTCCGGGAGAAACTC.............................................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0
...GCCTATGCGGCCTCCGGGAGAAAC................................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0
..................GGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0
...............................GTACGATTACATATGCCTCCACTCA................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
....CCTATGCGGCCTCCGGGAGAAAC................................................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0
..............................................................................................................................................................TCCGTTAGGCACTATTTAAAGTT...................................................................... 23 0 2 0.50 1 0 1 0 0
........TGCGGCCTCCGGGAGAAACTCCT............................................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0 0
...........GGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0
........CGCGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0
.............................................................................................................................................................TTCCGTTAGGCACTATTTAAAGT....................................................................... 23 0 2 0.50 1 1 0 0 0
...................................................................................................TTAATTTATAAAAAAGAGGAGGTAATGT............................................................................................................................ 28 0 2 0.50 1 0 0 1 0
..........CGGCCTCCGGTAGAAACTCCTGT.......................................................................................................................................................................................................................... 23 1 2 0.50 1 1 0 0 0
..GGCCTATGCGTCCTCCGGGAGAAACT............................................................................................................................................................................................................................... 26 1 2 0.50 1 0 1 0 0
...........GGCCTCCGGGAGAAACTCCTGTA......................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
...................................................................................................................................................................TAGGCACTATTTAAAGTTCAACGTTT.............................................................. 26 1 2 0.50 1 0 1 0 0
...................................................................................................................................................................TAGGCACTATTTAAAGTTCAAAGTTTTT............................................................ 28 0 2 0.50 1 1 0 0 0
..........................................................................................................................................................................................................................TAATAATAAATTTGCAGTCACAAAAAT...... 27 0 2 0.50 1 0 1 0 0
..............................................................................................................................................................................................TTCAAATTAAACGCTCAACGCCATAATA................................. 28 0 2 0.50 1 1 0 0 0
......CTTGCGGCCTCCGGGAGAAACTCCTGT.......................................................................................................................................................................................................................... 27 2 2 0.50 1 0 0 1 0
........................................................................................................................................................TACGGTTCCGTTAGGCACTATTTAAAGT....................................................................... 28 1 2 0.50 1 0 1 0 0
..............CTCCGGGAGAAACTCCTGTACGATTAC.................................................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0
............................................................................................................AAAAAAGAGGAGGTAATGTTAAC........................................................................................................................ 23 0 2 0.50 1 1 0 0 0
..............................................................................................................................................................TCCGTTAGGCACTATTTAAAGTTCAA................................................................... 26 0 2 0.50 1 1 0 0 0
................................................................................................................................................ACGTACGTAACGGTTCCGTTAGGCAC................................................................................. 26 0 2 0.50 1 1 0 0 0
.............CCTCCGGGAGAAACTCCTGTACGATATA.................................................................................................................................................................................................................. 28 3 2 0.50 1 1 0 0 0
....................................................................................................................................GACTTCTTCAGGACGTACGTAACGGT............................................................................................. 26 2 2 0.50 1 0 1 0 0
...............GCCGGGAGAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 28 1 2 0.50 1 0 1 0 0
................CCGGGAGAAACTCCTGTACGATTACATA............................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0
...............................GTACGATTACATATGCCTCCACTCATAC................................................................................................................................................................................................ 28 0 2 0.50 1 1 0 0 0
......................GAAACTCCTGTACGATTACATATGCC........................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
................................TACGATTACATATGCCTCCACTCATAC................................................................................................................................................................................................ 27 0 2 0.50 1 0 0 1 0
.............ATTCCGGGAGAAACTCCTGTACGAT..................................................................................................................................................................................................................... 25 2 2 0.50 1 0 1 0 0
............................................................................................................................................................................................TTTTCAAATTAAACGCTCAACGCCATAAT.................................. 29 0 2 0.50 1 1 0 0 0
..................GGGATAAACTCCTGTACGATTACAT................................................................................................................................................................................................................ 25 1 2 0.50 1 0 1 0 0
......................................................................................................................................................GTAACGGTTCCGTTAGGCACTATTT............................................................................ 25 0 2 0.50 1 1 0 0 0
.....................AGAAACTCCTGTACGATTACATATGCCT.......................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0 0
....CCTATGCGGCCTCCGGGAGAAACTCCT............................................................................................................................................................................................................................ 27 0 2 0.50 1 0 0 1 0
................................TACGATTACATATGCCTCCACTCAT.................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0
................................TACGATTACATATGCCTCCACTCATACT............................................................................................................................................................................................... 28 0 2 0.50 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004752:1440-1690 - dwi_1965 TTCCGGATACGCCGGAGGCCCTCTTTGAGGACATGCTAATGTATACGGAGGTGAGTATGAAGGAAAGTGAATTT------------------------TTTTATT-TTATTATTTAAAGTTTCT------------------AATTAAATATTTTTT-CTCCTCCATTACA-------------------------------------------------------------------------------------ATTGCAGGAAGAAGTCCTGCATGCATTGCCAAGGCAATCCGTGA--------TAAATTTCAAGT-TTCAAAAAAGT----TTAAT-------------------------------------TTGC---GAGTTGCGGTATTATATTATTATTTAAACGTCAGTGTTTT--TAATTTT------------A
droVir3 scaffold_12936:628196-628379 + ATT-----------------------TAT----------TG-A-----------------------------------------------------------ATT-T-----------------------------------AAATAAATATATTTT-TTAATTCATTTGA-------------------------------------------------------------------------------------TTTGGGGGAGGAAGGTATGTAAGCGTAATAAT------------------------TT-----T-TAGAACAAAATAAGATAAAAGCAGCAGAAAAAATAAAAAGTAAAGTTAATCATTTAATTGGTGCTATTTGTGGAATTA--AAAATATGAAAAGTTTAATAATTT--TAG--------------TTT
droMoj3 scaffold_6540:5955801-5955933 - GAC-----------------------ATG------CATAAATGTAGCGAAATAATGATAATATAAATCAAAAGA------------------------TTATATT-TTATTATTTAAATACTACTA---------TTAGACATTCCTAGCTTTTC--------------------------------------------------------------------------GTTTTC---------TTCTCTTCAATAGTTCCATGATCAAGTCATG--------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TTG
droGri2 scaffold_15110:864924-865000 + GCT-----------------------GCT----------G-TGTATGAAAATATG----------------TATTTTGGCTAATAAAAAG--------CTCCGTT-TTTTTTTTATAAGTTTTT------------------AATGAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------TTT
dp5 2:14413825-14413916 - GTA-----------------------TAT----------A-TGAAACGCAATG----------------AATAT------------------------TTTAGTT-TGTATGTATAAAGTTTTA------------------AATTAGGCCTTCATT-C-CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTAAAGATCAAAGTTTT--A----------------CAT
droPer2 scaffold_169:9918-9987 + GGG-----------------------AAT----------GC-G-----CT--G--------------TAGATTT------------------------AGTT----CGGGTATTAAAAAGAAAT------------------AATTTGCAAGTCGCG-C-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATA------------------------A----------------ATA
droAna3 scaffold_13499:1624499-1624624 - TAA-----------------------ATG----------AA-G-----TT--GAA--------------TA-----------AAATAAGAGGGTACTCTTTTATTTTTGGGATTGAAAATG-AT------------------TATTAAATATTTATT-GTTATTCAATACA----------------------------------GTT-CATA---------TTAAAT-TATA------------------------------------ATCCCTCA-ATGTTGCCAAAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------AT
droBip1 scf7180000396117:20580-20643 + TGA-----------------------ATT----------T----------------------------------------------------------TTGTTTT-TTATAATTTAATGTTTCT------------------GCTTAATTGTTTAATTTTTTATTATTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------ATT
droKik1 scf7180000302230:96910-97070 - AAT-----------------------TAA----------TT-A-------------------------------------------------------GACTATT-ATATTGCTAAAGATATTC------------------AATTAAAAAATTGTA-CTTTTCCATTATTATTCAAAACTTCTCAATGAGTCAATTATTGTTGAACTAGAACTGTAATTAAA-ACTTTGGTTGC---------A---------------------------------------------------------------------------------------------------------------------------------------------------AATTTTAAATGGTCAATTGA----CAACGGTCTTTT----------------TGA
droFic1 scf7180000453840:80141-80230 + TCT-----------------------TGGGATGTTCTAAGTTATAACAATGGGTCCATGAAAAAAAGTTAACTT------------------------AATAATT-TTATTTTCAAAAAATTAA------------------ATTTAGGTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TTT
droEle1 scf7180000488451:25613-25777 - AGT-----------------------AAA----------TT---------------------------------------------------------CTTTTTT-TTATTATTATTAATTTTT------------------AATTAATTTCTTAAT-TTTTATTATTATTATT--------------------------ATATAGCTGCCTA---------TCAAAT-AATT-GAG-CTGCAA------------------------------------ATCATCATAGCA-------AGTCAATCATAATTTTAATGTGTTCAAAAATAT----TTGAT-------------------------------------TTTT---------------------------------------------G-C----ATTAGAGTGTTAT
droRho1 scf7180000778786:747-854 - TAC-----------------------GAA----------TTTTTAATGAGGTGATTCTTAAGGTAAGTTATTTT------------------------ACTCATT-CCATTATCTTAAGAGCCA------------------TTTGAAGCATATTTT-T--------------------------------------------------------------------------------------------------------------------------------C------------------------TT-----C-TATAACAAAAT----TAAGA-------------------------------------GC-----------------------------------------------A----------------GAA
droBia1 scf7180000297392:1679-1781 - TAT-----------------------AAA----------AA-A-----TA----------------ATACATTT------------------------CTTTCTT-TTATTATTTTATGTTATC------------------GGAATATTAATTTTT-TTCTTTAACTTT--------------------------------------------------------------------------------------------------TGTTTTACATGAATTTATATGTCAATT------------------------------------------------------------------------------------T-----------------------------------------------A----------------TGA
droTak1 scf7180000410621:18009-18119 - TTT-----------------------TTG--------------------------------------------------------------------------TT-TTATTATTTTAACTTTTT------------------TTTTAAATATGTTTT-T-----------------------------------------ATATAAACAAAAT---------A-AAGTTGCATGC---------G---------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTAAATCATTATATACTTGTCAAAAATTT--CATTTTT----------CAA
droEug1 scf7180000407820:20907-20983 + GAT-----------------------GAT----------TATAAATAAAAATC--------------------T------------------------TTTTTGT-GTTTTATATATATACTCT------------------AATTAAACAATTATT-CCCTCCTCTCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------GTT
dm3 chrM:14879-14965 + AAT-----------------------TAA----------TA-A--------CAAA----------------TTTTTAAGCCAAAATAAAA--------CTTTAAA-T-------------TTTT------------------ATTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTTTATTATTAATTAAATATTAATAATTT--T----------------TAT
droSim2 2l:22447240-22447287 - AAT-----------------------TTC----------TT-A-----------------------------------------------------------ATT-TTTTAATTTGGTTCTTCT------------------AAAAAAAAATTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TTC
droSec2 scaffold_2204:709-755 + TTA-----------------------TTT-------------------------------------------------------------------------ATT-TTAACATTTTAATTTAAT------------------ATTTCAACATTTTTT-C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------CTT
droYak3 2R:1349577-1349732 + AGG-----------------------AAA----------GT-A--------------------------CTTTT------------------------TTTTCTT-TTTTTTTCTACAGTTATG-ATATAATTATTTTAGT-TATTTATTATTTTT---TTTTTCT----------------------------------ATATAAATGCATA---------A-AAAT-ATCTAGGGATTATGA------------------------------------ATCAC-------TTCAGTGA--------GCAGTTTCGACC-ATTAACTTTGT----TTAGA-------------------------------------TT-----------------------------------------------G----------------CAA
droEre2 scaffold_4784:22692128-22692219 - TCT-----------------------GGT----------T-------------------------------------------------------------------TTTTGTCCCAAGTTTCC------------------ATTCACGGTTTTTAT-TTTCTCCATCATA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCCACACCCATCACCATGTTA---------------------------------------------------------------------------------------------------------------------------------------A----------------TTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TTCCGGATACGCCGGAGGCCCTCTTTGAGGACATGCTAATGTATACGGAGGTGAGTATGAAGGAAAGTGAATTT------------------------TTTTATT-TTATTATTTAAAGTTTCT------------------AATTAAATATTTTTT-CTCCTCCATTACA-------------------------------------------------------------------------------------ATTGCAGGAAGAAGTCCTGCATGCATTGCCAAGGCAATCCGTGA--------TAAATTTCAAGT-TTCAAAAAAGT----TTAAT-------------------------------------TTGC---GAGTTGCGGTATTATATTATTATTTAAACGTCAGTGTTTT--TAATTTT------------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................CTCCATTACA-------------------------------------------------------------------------------------ATTGCAGGAAGAAG.................................................................................................................................................................................2424.00805012
.................................TGCTAATGTATACGGAGGTGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................2321.50302100
............................................................................................................................................................................................................................................................................................................................AAGT-TTCAAAAAAGT----TTAAT-------------------------------------TTG..................................................................2321.00202000
.......................................................................................................................................................................TACA-------------------------------------------------------------------------------------ATTGCAGGAAGAAGTCCTG............................................................................................................................................................................2321.00200020
.........................TGAGGACATGCTAATGTATACGGA..............................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000
.................................TGCTAATGTATACGGAGGTGAGTATGA...................................................................................................................................................................................................................................................................................................................................................................................................2720.50101000
..................................................................................................................................................................TCCATTACA-------------------------------------------------------------------------------------ATTGCAGGAAGAAG.................................................................................................................................................................................2320.50101000
...................................CTAATGTATACGGAGGTGAGTA......................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000
.................................................................................................................................................................CTCCATTACA-------------------------------------------------------------------------------------ATTGCAGGAAGAAGTCC..............................................................................................................................................................................2720.50100100
.................................................................................................................................................................CTCCATTACA-------------------------------------------------------------------------------------ATTGCAGGAAGAAGT................................................................................................................................................................................2520.50101000
.................................TGCTAATGTATACGGAGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000
..................................GCTAATGTATACGGAGGTGA.........................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000
.................................TGCTAATGTATACGGAGGTGAGTAT.....................................................................................................................................................................................................................................................................................................................................................................................................2520.50100010
.................................TGCTAATGTATACGGAGGTGAGTA......................................................................................................................................................................................................................................................................................................................................................................................................2420.50101000
.....................................................................................................................................................................................................................................................................................................................................................................................................TGCGGTATTATATTATTATTTAAACG................................2620.50100010
............................GGACATGCTAATGTATACGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................2320.50101000
.......TACGCCGGAGGCCCTCTTTGAGGACAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100010
...................................CTAATGTATACGGAGGTGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000
...................................CTAATGTATACGGAGGTGAGTAT.....................................................................................................................................................................................................................................................................................................................................................................................................2320.50101000
...........................................................................................................................................................................................................................................................................................................A--------TAAATTTCAAGT-TTCAAAAAAGT----T..............................................................................................................2520.50101000
...................................................TGAGTATGAAGGAAAGTGAATTT------------------------T............................................................................................................................................................................................................................................................................................................................................................2430.33100010
...................................................TGAGTATGAAGGAAAGTGAATTT------------------------TT...........................................................................................................................................................................................................................................................................................................................................................2530.33101000
....................................TAATGTATACGGAGGTGAGTATGAAG.................................................................................................................................................................................................................................................................................................................................................................................................2630.33101000
.......................................................TATGAAGGAAAGTGAATTT------------------------TTTTATT-.....................................................................................................................................................................................................................................................................................................................................................2630.33100010
............................................................AGGAAAGTGAATTT------------------------TTTTATT-TTA..................................................................................................................................................................................................................................................................................................................................................2430.33101000
..................................................GTGAGTATGAAGGAAAGTGAATTT------------------------.............................................................................................................................................................................................................................................................................................................................................................2430.33101000
.........................................................TGAAGGAAAGTGAATTT------------------------TTTTATT-TT...................................................................................................................................................................................................................................................................................................................................................2630.33100010
......................................................GTATGAAGGAAAGTGAATTT------------------------TT...........................................................................................................................................................................................................................................................................................................................................................2230.33100010
.......................................................................................................................................................................TACA-------------------------------------------------------------------------------------ATTGCAGGAAGAAA.................................................................................................................................................................................1840.25101000
droVir3
ATT-----------------------TAT----------TG-A-----------------------------------------------------------ATT-T-----------------------------------AAATAAATATATTTT-TTAATTCATTTGA-------------------------------------------------------------------------------------TTTGGGGGAGGAAGGTATGTAAGCGTAATAAT------------------------TT-----T-TAGAACAAAATAAGATAAAAGCAGCAGAAAAAATAAAAAGTAAAGTTAATCATTTAATTGGTGCTATTTGTGGAATTA--AAAATATGAAAAGTTTAATAATTT--TAG--------------TTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
GAC-----------------------ATG------CATAAATGTAGCGAAATAATGATAATATAAATCAAAAGA------------------------TTATATT-TTATTATTTAAATACTACTA---------TTAGACATTCCTAGCTTTTC--------------------------------------------------------------------------GTTTTC---------TTCTCTTCAATAGTTCCATGATCAAGTCATG--------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCT-----------------------GCT----------G-TGTATGAAAATATG----------------TATTTTGGCTAATAAAAAG--------CTCCGTT-TTTTTTTTATAAGTTTTT------------------AATGAAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------TTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
GTA-----------------------TAT----------A-TGAAACGCAATG----------------AATAT------------------------TTTAGTT-TGTATGTATAAAGTTTTA------------------AATTAGGCCTTCATT-C-CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTAAAGATCAAAGTTTT--A----------------CATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................T------------------------TTTAGTT-TGTATGTATAAAA........................................................................................................................................................................................................................................................................................................................................2111.0010000000010
......................................................................................................................GTTTTA------------------AATTAGGCCTTCATT-C-CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C..........................................2511.0010010000000
...........................................................................................................................................................TT-C-CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTAAAGATCAA............................2011.0010000001000
........................................................................................................................................................TCATT-C-CC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTAAAGATCAAAGTTT.......................2811.0010010000000
...........................AT----------A-TGAAACGCAATG----------------AATAT------------------------.............................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
GGG-----------------------AAT----------GC-G-----CT--G--------------TAGATTT------------------------AGTT----CGGGTATTAAAAAGAAAT------------------AATTTGCAAGTCGCG-C-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATA------------------------A----------------ATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..G-----------------------AAT----------GC-G-----CT--G--------------TAGATTT------------------------AGT..........................................................................................................................................................................................................................................................................................................................................................2030.331000001
droAna3
TAA-----------------------ATG----------AA-G-----TT--GAA--------------TA-----------AAATAAGAGGGTACTCTTTTATTTTTGGGATTGAAAATG-AT------------------TATTAAATATTTATT-GTTATTCAATACA----------------------------------GTT-CATA---------TTAAAT-TATA------------------------------------ATCCCTCA-ATGTTGCCAAAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGA-----------------------ATT----------T----------------------------------------------------------TTGTTTT-TTATAATTTAATGTTTCT------------------GCTTAATTGTTTAATTTTTTATTATTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------ATTSizeHit CountTotal NormTotal
No Reads
droKik1
AAT-----------------------TAA----------TT-A-------------------------------------------------------GACTATT-ATATTGCTAAAGATATTC------------------AATTAAAAAATTGTA-CTTTTCCATTATTATTCAAAACTTCTCAATGAGTCAATTATTGTTGAACTAGAACTGTAATTAAA-ACTTTGGTTGC---------A---------------------------------------------------------------------------------------------------------------------------------------------------AATTTTAAATGGTCAATTGA----CAACGGTCTTTT----------------TGASizeHit CountTotal NormTotal
No Reads
droFic1
TCT-----------------------TGGGATGTTCTAAGTTATAACAATGGGTCCATGAAAAAAAGTTAACTT------------------------AATAATT-TTATTTTCAAAAAATTAA------------------ATTTAGGTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TTTSizeHit CountTotal NormTotal
No Reads
droEle1
AGT-----------------------AAA----------TT---------------------------------------------------------CTTTTTT-TTATTATTATTAATTTTT------------------AATTAATTTCTTAAT-TTTTATTATTATTATT--------------------------ATATAGCTGCCTA---------TCAAAT-AATT-GAG-CTGCAA------------------------------------ATCATCATAGCA-------AGTCAATCATAATTTTAATGTGTTCAAAAATAT----TTGAT-------------------------------------TTTT---------------------------------------------G-C----ATTAGAGTGTTATSizeHit CountTotal NormTotal
No Reads
droRho1
TAC-----------------------GAA----------TTTTTAATGAGGTGATTCTTAAGGTAAGTTATTTT------------------------ACTCATT-CCATTATCTTAAGAGCCA------------------TTTGAAGCATATTTT-T--------------------------------------------------------------------------------------------------------------------------------C------------------------TT-----C-TATAACAAAAT----TAAGA-------------------------------------GC-----------------------------------------------A----------------GAASizeHit CountTotal NormTotal
No Reads
droBia1
TAT-----------------------AAA----------AA-A-----TA----------------ATACATTT------------------------CTTTCTT-TTATTATTTTATGTTATC------------------GGAATATTAATTTTT-TTCTTTAACTTT--------------------------------------------------------------------------------------------------TGTTTTACATGAATTTATATGTCAATT------------------------------------------------------------------------------------T-----------------------------------------------A----------------TGASizeHit CountTotal NormTotal
No Reads
droTak1
TTT-----------------------TTG--------------------------------------------------------------------------TT-TTATTATTTTAACTTTTT------------------TTTTAAATATGTTTT-T-----------------------------------------ATATAAACAAAAT---------A-AAGTTGCATGC---------G---------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTAAATCATTATATACTTGTCAAAAATTT--CATTTTT----------CAASizeHit CountTotal NormTotal
No Reads
droEug1
GAT-----------------------GAT----------TATAAATAAAAATC--------------------T------------------------TTTTTGT-GTTTTATATATATACTCT------------------AATTAAACAATTATT-CCCTCCTCTCGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------GTTSizeHit CountTotal NormTotal
No Reads
dm3
AAT-----------------------TAA----------TA-A--------CAAA----------------TTTTTAAGCCAAAATAAAA--------CTTTAAA-T-------------TTTT------------------ATTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTTTATTATTAATTAAATATTAATAATTT--T----------------TATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................TA-A--------CAAA----------------TTTTTAAGCCA.............................................................................................................................................................................................................................................................................................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CAAA----------------TTTTTAAGCCAAAATA........................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAT-----------------------TAA----------TA-A--------CAAA----------------TTTTTAAGCC..............................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TTTT------------------ATTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTTTTT...............................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAT-----------------------TTC----------TT-A-----------------------------------------------------------ATT-TTTTAATTTGGTTCTTCT------------------AAAAAAAAATTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TTA-----------------------TTT-------------------------------------------------------------------------ATT-TTAACATTTTAATTTAAT------------------ATTTCAACATTTTTT-C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------CTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AGG-----------------------AAA----------GT-A--------------------------CTTTT------------------------TTTTCTT-TTTTTTTCTACAGTTATG-ATATAATTATTTTAGT-TATTTATTATTTTT---TTTTTCT----------------------------------ATATAAATGCATA---------A-AAAT-ATCTAGGGATTATGA------------------------------------ATCAC-------TTCAGTGA--------GCAGTTTCGACC-ATTAACTTTGT----TTAGA-------------------------------------TT-----------------------------------------------G----------------CAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................TA---------A-AAAT-ATCTAGGGATTATGA------------------------------------ATCAC-------T..........................................................................................................................................................2870.86603300000000
...................................................................................................................................................................................................................TA---------A-AAAT-ATCTAGGGATTATGA------------------------------------ATCAC-------C..........................................................................................................................................................2870.43300300000000
.................................................................................................................................................................................................................................AAT-ATCTAGGGATTATGA------------------------------------ATCAC-------T..........................................................................................................................................................2470.29201100000000
...................................................................................................................................................................................................................................T-ATCTAGGGATTATGA------------------------------------ATCAC-------TTCA.......................................................................................................................................................2580.25202000000000
..................................................................................................................................................................................................................ATA---------A-AAAT-ATCTAGGGATTATGA------------------------------------ATCAC-------...........................................................................................................................................................2870.14100100000000
................................................................................................................................................................................................................................AAAT-ATCTAGGGATTATGA------------------------------------ATCAC-------T..........................................................................................................................................................2570.14101000000000
.........................................................................................................................................................................................................TATAAATGCATA---------A-AAAT-ATCTAGGGAT................................................................................................................................................................................................................2770.14101000000000
.............................................................................................................................................................................................................AATGCATA---------A-AAAT-ATCTAGGGATT...............................................................................................................................................................................................................2480.13101000000000
...........................................................................................................................................................................................................TAAATGCATA---------A-AAAT-ATCTAGGGATT...............................................................................................................................................................................................................2680.13100100000000
...............................................................................................................................................................................................................TGCATA---------A-AAAT-ATCTAGGGATTATGA------------------------------------A......................................................................................................................................................................2780.13101000000000
...................................................................................................................................................................................................................................T-ATCTAGGGATTATGA------------------------------------ATCAC-------T..........................................................................................................................................................2280.13101000000000
droEre2
TCT-----------------------GGT----------T-------------------------------------------------------------------TTTTGTCCCAAGTTTCC------------------ATTCACGGTTTTTAT-TTTCTCCATCATA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCCACACCCATCACCATGTTA---------------------------------------------------------------------------------------------------------------------------------------A----------------TTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................TA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCCACACCC.......................................................................................................................................................................2614.0043100000
.........................................................................................................................................................................TA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCCACACCCA......................................................................................................................................................................2713.0033000000
.......................................T-------------------------------------------------------------------TTTTGTCCCAAGTTTCC------------------ATTCACGGTT.......................................................................................................................................................................................................................................................................................................2813.0033000000
.......................................T-------------------------------------------------------------------TTTTGTCCCAAGTTTCC------------------ATTCACGG.........................................................................................................................................................................................................................................................................................................2612.0021000001
............................T----------T-------------------------------------------------------------------TTTTGTCCCAAGTTTCC------------------ATTCACGGT........................................................................................................................................................................................................................................................................................................2811.0011000000
.........................................................................................................................................................................TA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCCACA..........................................................................................................................................................................23200.601212000000
.........................................................................................................................................................................TA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCCACACC........................................................................................................................................................................25200.2040000004
.........................................................................................................................................................................TA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCCACAC.........................................................................................................................................................................24200.1530100200
.........................................................................................................................................................TTAT-TTTCTCCATCATA-------------------------------------------------------------------------------------ATCAGGGG.......................................................................................................................................................................................25200.1533000000
........................................................................................................................................................................ATA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCC.............................................................................................................................................................................21200.1020000020
......................................................................................................................................................TTTTTAT-TTTCTCCATCATT-------------------------------------------------------------------------------------...............................................................................................................................................................................................20200.0511000000
.........................................................................................................................TCC------------------ATTCACGGTTTTTAT-TTTCTCCA.........................................................................................................................................................................................................................................................................................26200.0511000000
.........................................................................................................................................................................TA-------------------------------------------------------------------------------------ATCAGGGGAAATAGATCCAC...........................................................................................................................................................................22200.0511000000

Generated: 05/18/2015 at 03:07 AM