ID:

dwi_1963

 Coordinate:

scf2_1100000004749:3870-4020 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dwil_GLEANR_5462:2]; CDS [Dwil\GK22295-cds]; intron [Dwil\GK22295-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGGTTTTTGATGCTGATCAAGAATATATATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACATTTTGGCGACTTAAATATACCATTTCACCCTATGGGTGTATGGTATAAAAATATACTAACACTCTTCAAATGTGGATAGTTTTTATCCTATTAACACCGATGAAAATAGAACTGTTACATCTGCCAGCATCTTCAATCCTCATGAATATATTGGCGGTACTCTGGTGGCCATTGCTG
**************************************************.........(((((((.....)))....)))).......((((((((..(((((...))))).))))))))...................((.(((((.((((((((.....((((......)))).....))))))))))))).))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V118
embryo
 M045
female body
 V117
male body
..........ATGCTGATCAAGAATATATATACTT........................................................................................................................................................................................................................ 25 0 20 0.30 6 6 0 0
............................TATACTTTGTGGGGTCGGAGATGC....................................................................................................................................................................................................... 24 0 20 0.15 3 0 3 0
.................................TTTGTGGGGTCGGAGATGCTTCCTT................................................................................................................................................................................................. 25 0 20 0.05 1 0 0 1

Anti-sense strand reads

AACCAAAAACTACGACTAGTTCTTATATATATGAAACACCCCAGCCTCTACGAAGGAAGACGGACAATGTATGTAAAACCGCTGAATTTATATGGTAAAGTGGGATACCCACATACCATATTTTTATATGATTGTGAGAAGTTTACACCTATCAAAAATAGGATAATTGTGGCTACTTTTATCTTGACAATGTAGACGGTCGTAGAAGTTAGGAGTACTTATATAACCGCCATGAGACCACCGGTAACGAC
**************************************************.........(((((((.....)))....)))).......((((((((..(((((...))))).))))))))...................((.(((((.((((((((.....((((......)))).....))))))))))))).))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 M020
head
 V117
male body
.....................................ACCCCAGCCTCTACGAAGGAA................................................................................................................................................................................................. 21 0 20 0.25 5 5 0 0 0
............CGACTAGTTCTTATATATATG.......................................................................................................................................................................................................................... 21 0 20 0.20 4 4 0 0 0
..............................................................................................................................................................................................TGTAGACCATCGTAGAAG........................................... 18 2 8 0.13 1 1 0 0 0
..............................................................................................................................................................TCCGATCATTGTGGCTAC........................................................................... 18 3 20 0.05 1 0 0 1 0
.............................................................GGACAATGTATGTAAAACCGCTGAAT.................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0
.........................................................................................ATATGGTAAAGTGGGATACC.............................................................................................................................................. 20 0 20 0.05 1 0 1 0 0
.................................................................AATGTATGTAAAACCGCTGAATT................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0
...........................................................................................ATGGTAAAGTGGGATACC.............................................................................................................................................. 18 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................CTGTAGACCATCGTAGAAGTT......................................... 21 3 20 0.05 1 0 0 0 1
...............................................................ACAATGTATGTAAAACCGCTTAAT.................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0
.....................................................................................................GGGATACCCACATACCATATTTTTATAT.......................................................................................................................... 28 0 20 0.05 1 1 0 0 0
....................................................AAGGAAGACGGACAATGTATG.................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
.......................................CCCAGCCTCTACGAAGGA.................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0
..........................................................................................TATGGTAAAGTGGGATACC.............................................................................................................................................. 19 0 20 0.05 1 0 1 0 0
.........................................CAGCCTCTACGAAGGAAGACGGACA......................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0
...............................................................ACAATGTATGTAAAACCGCTGAATT................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004749:3820-4070 - dwi_1963 TTGGTTTTTGATGCTGATCAAGAATA----TATATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACAT-------TTTGGCGACTTAAATATACCATTTCACCCT-------ATGGGTGTATGGTATAAAAATA-------------TACT-------------AACACTCTTCAAATG--TG-------------------------------------------------------------GA--------------TAGTTTTT----------ATCCTATTAA------------------------------------------------------------------------------------------------------------CA---------------------------------------------------------------------------CCGATG-------------------------------AAAATAGAA-CTGTTACATC---TGCCAGCATCT-------------------------------------------------------------------------------------------------TCA-ATC--------CTCATGAATATATTGGCG---------------------GTACTCTGGTGGCCATTGCTG
droVir3 scaffold_12958:2840348-2840594 - TCGGCTATTGATGCTAATCAAGAATA----TATATACTTTATGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACATTTGGATTTCGCACAAATACATAATAACCTTTTTATCTATTTTCAATGGGTTCAGGGTATTAAATTA---------------------------------------------AAAAGA----T-------------------------------------------------------------------------------------------------------------TAACT--------TTTTATTCAAGT----------------CAGCTCAGTAGTTGAT--------------------------------A--------------------------G--------------GCTCTTG-----------------------------------------------------------------------------------------CTCC---TGGATGCACGT-------------------------------------------------------------------------------------------------GGT-AGA--------CACGTTAATATGGTTGTG---------------------GTACTCCGCTGGGC---ACTG
droMoj3 scaffold_6498:3004348-3004590 + TCAGCTCGTCGCCCTGATCAAGAATA----TATATACTTTGTGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATACAT-------TTCAACAAAACCATTATACCCTGATTTCCCATTGAAAATGGGTTCAGGGTATTAAAAAG------------GCACTACG---CACTACT------------------------------------AATATTACTTTAAAATAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTT-------------------------------AATATACAG-GTGTTATTTT---TGTCATTAGCT-------------------------------------------------------------------------------------------------TAA-ATA----------AATTGAAT------TT-----------ATCGCAGGGGGCTCT----------AATCTG
droGri2 scaffold_15110:22745419-22745654 - TCGGCTGTTGACCCTTATCAAGAATA----TACATATTTTATGGAGTCGGAGATGCTTCCTTCTGCCTGTTACATAAAT-------TTGCACAAAACCATTATACCCCTTTTACCCATTTTTAATGAGTTTGGGGTATAGTAAAG----------------TAAT----------A----------------TAAA----TTT--------------------------------------------------------GAGTTTAGGTGCTATTTTCA----------AT------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------C----TACAAGTAACAGGTG-T--------------------------------GTGGCTAATAGCCGGTATTC-------------------------------------------------------------------------------------------------TCACATTCTCACAAATTCACTGATA---------------------------------------------TTCTG
dp5 XL_group3a:1506849-1507074 + TCGGCTATTGATGCTGATCAAGAATA----TATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAAAACTCA-TT----TTGAGTATCGGGTATAAAAACTCTTACAG-----AAA--------------------------------CT-------------------------------------------------------------GA--------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTTAACTAAAGAATA-----------------------TATATG-------------------------------AATGTACAA-GGA--------------------------TCAC------------------------------------------------------------------AAGCATT----------GAT--TCA-TTT--------TTTAAGATTTTA------------------------------------------AAGGCG
droPer2 scaffold_963:8981-9245 + TCGGCTATTGATGCTGATCAAGAATA----TATATACTTTATG-GGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCA-TT----TTGAGTATCGGGTATAAAAATA---------------------------------------------AACAAA----TTTTATTTCTC----------------------------------------TGAGGA--------------TAGTT---TTCTGCTTCT----------------------------------------------GTTGC-----TGTCTG----------------CATATGATGCTGCCGCTGCTATTATTTTCGATG---------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------TGT------------------------------------------TGC-CGA--------TGCGTTGTTGTCGATGCT---------------------GT-TTCTGTTTGCCGCTGCCG
droAna3 scaffold_13337:22925098-22925334 + TCAGGAGGTGATCCTGATCAAGAATA----TATATACTTTAAAGGGTCGGAGATATATCCTTCACTGTGTTGCACACTT-------TTGACCACAATTATAATACCCTC------T-------GCA-----AGGGTATAAAAATA---------------------------------------------AAC----------------------------------------------------------TGCGGATCGATTTTGATAATTATTTTTT----------AC------------------------------------------------------------------------------------------------------------ACTGTTAAAATTGATC-----------AA------------------------------------------------------------------------------------------------------------T---------------GGTAGATTTTTG--------------------------------------AAATCAA--------------------------------------CATTTTCA-TTT--------CATATGGACATTGTAATT---------------------GGTATTTGTTTTTCATTGTTA
droBip1 scf7180000396292:16113-16363 - TCAGGAGGTGATCCTGATCAAGAATA----TATATATTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGGACAAAATTATAATACCCTCT-------------GCA-----AGGGTATAAAAATTGTAAGTATAAGTATA-AT-AAAT-------A--------------A----GTATATATAAT---A----------------------------------------------------------------------------------AT--------AAG--------TATATAATAGGTA-------------------------TATATAAT-CAACAA-TAATAGAAACA------------------------------G----------------------CCTAATGTGG-----------------C-----GAAATTT---------------------------TTACA--------------------------------TGAAATA------------------------------------------------------------------------------------------------------------------------------------------ATGCA---------------------GTTACATGGTAGCTATCGCTG
droKik1 scf7180000302610:1325861-1326072 - TTGGCTGTTGATGCTGATCAAGAATA----TATATACTTTATAGGGTCGGAAAGGTCTCCTTCACTGCGTTGCAAACTT-------CTCACTGAAGTTATAATACCCTGCA--------------------AGGGTATAAAAATA---------------------------------------------G--------------------------------------------------------------------------------------------------------------------GGCAAACA--------TTTTAAATAGAT----------------CCTTTTA-AAGTTGAT--------------------------------A---------------------------------------------------------------------------------CTGCAACTG-------------------------------ACAATACA-----------------------------------------------------AAATCTGTCGCTCAACCTCTAATATTA--------------------------------------------------------------------TTTAGATG---------------------GC-----------AC-TTTAG
droFic1 scf7180000454069:299311-299553 + TGAGATCGTGATGCTGATCAAGAATA----TATAAACTTTACGGGATCTGAGGTGTCTCCTTCATTGCGTTTCAAACTT-------CTGACCTAAATTATAATACTCTT-TGCTCT-------GCA-----AGGGTGTAAAAATATTTA-----------------TC-------A--------------A--------------------------------------------------------------------------------TATTTTTG----------CAAATGTAACGATTAA--------AATAT--TAGCCAGA----AGT----------------CACGTCAT-CGGTGA-TGATAAAAACG----------------------------------AAT----------------CCTGG----------------------------------------------------------------------------------------------------------------TGCATCTTCAATTTCC--------------------------------------AATTAGA--------------------------------------------------------------------T--------------------------------CCAGTTGGTTCTGGTGG
droEle1 scf7180000490446:1724-1981 - TCGGCTATTTATCCTGTTCAAGAATA----TATATACTTTATAGGGTCGTAAACGCTTCCCTTTACCTGTTACATACTT-------TTCAACGATTACAATATACTTTTTTACTCT-------ACGAGTAACGGGTATAACTACA----------------TT-AATT-------A--------------A----TAATAGTTAAT---A----------------------------------------------------------------------------------ATATAAC------------------------------------------------------------------------------------------------------------C-------CTCTTACTTT-------------------------------------------------------------------------TTAGTTTCATTTTTATTCCGAAGAGTTTAAAA-TTGTAGTTTA---AGGGGTAACTT-------------------------------------------------------------------------------------------------TTA-AGC--------CACAATATTTTAATTTTG---------------------ATACTTTCGCGGTT-----AT
droRho1 scf7180000777966:11188-11430 + TCGGCTAGTGATCCTGATCAAGAATA----TATATACTTTATAGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTT-------TTGCACGAATACAATATACCCTTTTACTCT-------ACGAGTAACGGGTATAAAAACA----------------TA-----------------------------C----------------------------------------------------------AACAAACG------------------------------------------------------------------------------------------------------------------------------------------------------------GTCATACATTT---------------TCTCTTTTTTCTGTAGACCAAATGAAACTTT-------------------------------------------------------------GTTATGAT---AGATAGCGTTT------TTA--------------------------------------T-------------------------------------------------------------------AAGCATATTTTGTCACTACACTTATG----------C---A----TCATTAGCTCTG
droBia1 scf7180000301508:40289-40518 - TCGGCTAGAGATCCTAATCAAGAATA----TAAGTACTTTATGGGGTCGGAAATGCTTCCTTCTACCTGCTACATACTT-------TCCGACGAATCTAGTATACCCTTTTACTCT-------ATGAATACCGTTAAAAATTATA----------------TA------------AAAAATATAAAAACA--CC-------------------------------------------------------------AA--------------TGTTTTTT----------AATATATAAC------------------------------------------------------------------------------------------------------------CA----------------------CCTAGTATGC-----------------TTGG------------------------------------------------------------AAATAACATTTTTTAA---------------------T--------------------------------------TTCTAACATCT------------------------------------------TTTA-GTT--------CTGACAAC-----------------------------------------------TATAT
droTak1 scf7180000415712:57708-57956 + TCGGCTAGTGACCCTGATCAAGAATA----TATATACTTTATGGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTT-------TTGCACGAATCTAGTATACCCTTTTACTCT-------ACGAGTAACGGGTATAAAAACT----------------TA-A--------------------AATTG--CA-----------------AATTTT----------------AAATTATTTTGCAGACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTCACACAATTTACT--------------------------------TGAAGTGTTC-CCGACAATGTTAATTTGCCGACTAATTTAATCCACAAAAGTC------------------------------------------------------------------------------------------GTTGGGG---------------------ATTCTCTG---------GTGG
droEug1 scf7180000407052:40973-41192 + TTCGCTATTGATCCTGATCAAGAATA----TATATACATTATAGGGTCGGAAACGCTTTCTTCTATCTGTTACATACAT-------TTTAACGAATCTAGTATATCCTTTTACTCT-------ACGAGTAACGGGTATAAAAATCTTAA-----------------TC-------A--------------A----A----------------------------------------------------------------------------ATC--------------AAAAAGTAAAGACAATACGGCTAATG--------TCGTA----AAT----------------AATGTTA-TAGTTGAC--------------------------------A--------------------------AATGTC----------CTCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-ACC--------TTCATGAATAT---------------------------------------------TTTG
dm3 chr3L:23483382-23483616 + TTGGCTATTGACCCTGATCAAGAATA----TATATACTTTATACAGCCGGAAACGCTTCCTTATGCCTGTTACATACTT-------TTCAACGAATCTAGTATACCCTTTTACTCT-------ACGAGTAACGCGTTTAAAAATATCAG--------------------------------------------------------------------------------------------------------CAAAAC-------------------------------------------------------A--------TTGT--------AACACTTTGTTGAA--------------------------------------------------A--------------------------------------------------------GTGTG-----------------------A----------------------------------------------ATATGAATTA---TA----------------------------------TGAATA---TCGT-------------------------------------ATAAATTCAAAAA---ACATTTTCA-ATA--------TTCACAGAAAG-----------------------------------GTTTATGATGCCTT
droSim2 3r:27124504-27124721 - TCAGCTGCTGATTCTGATCAATAATA----TATATACTTTACATAGTCGAAAACGCTTCCTTCTGCCTGTTACATACTT-------TTCAACCAAT-TAGTATACCCTTTTACTCT-------ACGAGTAACGGGTAAAAGA----------------GACTAAA---GTCTACT------------------------------------AATATG----------------TACATATGTATCTGACCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATAAACAGAAGTTG-T--------------------------------CAAACCGTTCGCCAGCTGCGGCAGTTCCC--------------------------------------AAACAAA--------------------------------------TAT----------------------------------------------------------------------------T
droSec2 scaffold_31:514102-514319 - TCAGCTGCTGATTCTGATCAATAATA----TATATACTTTATATAGTCGAAAACGCTTCCTTCTGCCTGTTACATACTT-------TTCAACCAAT-AAGTATACCCTTTTACTCT-------ACGAGTAACGGGTAAAAGA----------------GACTAAA---GTCTACT------------------------------------AATATG----------------TACATATGTATCTGACCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATAAACAGAAGTTG-T--------------------------------CAAACCGTTCGCCAGCTGCGGCAGTTCCC--------------------------------------AAACAAA--------------------------------------TAT----------------------------------------------------------------------------T
droYak3 v2_chr3L_random_018:15425-15639 - TCGGCTATTGATCCTGATCAAGAATA----TATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACATACTT-------TTCAACGAATCTAGTATACCCTTTTACTCT-------ACGAGTAACGGGTATACAAATA---------------------------------------------AA--------TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGA-----------------TCGGATGAAACGTTTTTGTTTTATTGCATTT--------------------------------AAAAAAAA------------------ATAC-----------------------------------ACGT-----------------------------------------GGC-------GGACC----CTGTATATA--------CTTATAAATAT----------------------------------------------TTT
droEre2 scaffold_4845:2724866-2725107 + TCGGCTATTGATCCTGATAAAGATTATATGTATATACTTTATATGGTCGGAAACGTTTCCTTCTGCGTGTTACGTACTT-------TTTAACGAATCTAGCATACCCTTTTAGTCT-------ACGAGTATCGGGTATAATAATA----------------TTAT----------AAT-ATATAAAATTT--CA-------------------------------------------------------------AA---------------TGTT---TTCTTCTTAT----------------------------------------------AACGC-----TCAA--------------------------------------------------A--------------------------------------------------------GCATA-----------------------T----------------------------------------------TTATTAATTC---TA----------------------------------TAAATT---TTGT-----------TTCAAAAATATATGGATAGTGGTTAGTGGC-------------------------------------------------------------------------------------AG-TGGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TTGGTTTTTGATGCTGATCAAGAATA----TATATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACAT-------TTTGGCGACTTAAATATACCATTTCACCCT-------ATGGGTGTATGGTATAAAAATA-------------TACT-------------AACACTCTTCAAATG--TG-------------------------------------------------------------GA--------------TAGTTTTT----------ATCCTATTAA------------------------------------------------------------------------------------------------------------CA---------------------------------------------------------------------------CCGATG-------------------------------AAAATAGAA-CTGTTACATC---TGCCAGCATCT-------------------------------------------------------------------------------------------------TCA-ATC--------CTCATGAATATATTGGCG---------------------GTACTCTGGTGGCCATTGCTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........ATGCTGATCAAGAATA----TATATACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.30600060
................................TATACTTTGTGGGGTCGGAGATGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15303000
.....................................TTTGTGGGGTCGGAGATGCTTCCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
droVir3
TCGGCTATTGATGCTAATCAAGAATA----TATATACTTTATGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACATTTGGATTTCGCACAAATACATAATAACCTTTTTATCTATTTTCAATGGGTTCAGGGTATTAAATTA---------------------------------------------AAAAGA----T-------------------------------------------------------------------------------------------------------------TAACT--------TTTTATTCAAGT----------------CAGCTCAGTAGTTGAT--------------------------------A--------------------------G--------------GCTCTTG-----------------------------------------------------------------------------------------CTCC---TGGATGCACGT-------------------------------------------------------------------------------------------------GGT-AGA--------CACGTTAATATGGTTGTG---------------------GTACTCCGCTGGGC---ACTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................TACATTTGGATTTCGCACAAATACAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2634.3313000000000000000000000000210110201013100000000000000000000000000
..........................................................................TACATTTGGATTTCGCACAAATACATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................TACATTTGGATTTCGCACAAATACATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.251000000000000000000000000000000000010000000000000000000000000000
....................AGAATA----TATATACTTTATGGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.153000000000000000000000000000030000000000000000000000000000000000
.................TCAAGAATA----TATATACTTTATGGGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000000003000000000000000000000000000000000
..........................................................................TACATTTGGATTTCGCACAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000002000000000000000000000000000000000
..........................................................................TACATTTGGATTTCGCACAAATAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000002000000000000000000000000000000000000
..........................................................................TACATTTGGATTTCGCACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000000000000020000000000000000000000000000
...................................................................TGTTACATACATTTGGATTTCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000002000000000000000000000000000000000
......................................................................TACATACATTTGGATTTCGCACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000000200000000000000000000000000000
.CGGCTATTGATGCTAATCAAGAATA----TAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28150.071000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................CTATTTTCAATGGGTTCAGGGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24150.071000000000000000000000000100000000000000000000000000000000000000
.CGGCTATTGATGCTAATCAAGAATA----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25190.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................CTATTTTCAATGGGTTCAGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
...................................ACTTTATGGGGTCGGAGATGCTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000010000000000000000000000000000000000000
.......................................TATGGGGTCGGAGATGCTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000001000000000000000000000000000000000000000000000000000000
..............................................................................TTTGGATTTCGCACAAATACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................CTATTTTCAATGGGTTCAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
........................................ATGGGGTCGGAGATGCTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000001000000000000000000000000000000000000000000000000000000
.....................................................................TTACATACATTTGGATTTCGCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000010000000000000000000000000000000
..........................................................................TACATTTGGATTTCGCACAAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..................................TACTTTATGGGGTCGGAGATGCTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................CATTTGGATTTCGCACAAATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000001000000000000000000000000000000000000000
.............CTAATCAAGAATA----TATATACTTTATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................CTGTTACATACATTTGGATTTCGCACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000001000000000000000000000000000
.........................................TGGGGTCGGAGATGCTTCCTTCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000100000000000000000000000000000000
..........................................................................TACATTTGGATTTCGCACAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001000000000000000000000000000000000000000000000000000000000
droMoj3
TCAGCTCGTCGCCCTGATCAAGAATA----TATATACTTTGTGGGGTCTGCCACGCCTCCTTCTGCCTGTTACATACAT-------TTCAACAAAACCATTATACCCTGATTTCCCATTGAAAATGGGTTCAGGGTATTAAAAAG------------GCACTACG---CACTACT------------------------------------AATATTACTTTAAAATAATAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTT-------------------------------AATATACAG-GTGTTATTTT---TGTCATTAGCT-------------------------------------------------------------------------------------------------TAA-ATA----------AATTGAAT------TT-----------ATCGCAGGGGGCTCT----------AATCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAG-GTGTTATTTT---TGTCATTAGCT-------------------------------------------------------------------------------------------------C..........................................................................2711.001100000
..........................................................................TACAT-------TTCAACAAAACCATTATACCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.50101000000
.................TCAAGAATA----TATATACTTTGTGGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.204400000
..................................................................................................................CCATTGAAAATGGGTTCAGGGTATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.171100000
....................................................ACGCCTCCTTCTGCCTGTTACATACAT-------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.................................ATACTTTGTGGGGTCTGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
.....................................TTTGTGGGGTCTGCCACGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
..................................TACTTTGTGGGGTCTGCCACGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
droGri2
TCGGCTGTTGACCCTTATCAAGAATA----TACATATTTTATGGAGTCGGAGATGCTTCCTTCTGCCTGTTACATAAAT-------TTGCACAAAACCATTATACCCCTTTTACCCATTTTTAATGAGTTTGGGGTATAGTAAAG----------------TAAT----------A----------------TAAA----TTT--------------------------------------------------------GAGTTTAGGTGCTATTTTCA----------AT------------------------------------------------------------------------------------------------------------A---------------------------------------------------------------------------------C----TACAAGTAACAGGTG-T--------------------------------GTGGCTAATAGCCGGTATTC-------------------------------------------------------------------------------------------------TCACATTCTCACAAATTCACTGATA---------------------------------------------TTCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
dp5
TCGGCTATTGATGCTGATCAAGAATA----TATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAAAACTCA-TT----TTGAGTATCGGGTATAAAAACTCTTACAG-----AAA--------------------------------CT-------------------------------------------------------------GA--------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTTAACTAAAGAATA-----------------------TATATG-------------------------------AATGTACAA-GGA--------------------------TCAC------------------------------------------------------------------AAGCATT----------GAT--TCA-TTT--------TTTAAGATTTTA------------------------------------------AAGGCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................TCGGAAACGATTCCTTCTGGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320116.4023280232800000000
.....................................................................................TTACCACAAATCTAATATACCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22205.00100010000000000
...............................................CGGAAACGATTCCTTCTGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21203.707407400000000
.....................................................................................TTACCACAAATCTAATATACCCCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2633.67110530000300
........................................................TTCCTTCTGGACGTTACACACATCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27202.154304300000000
.....................................................................................TTACCACAAATCTAATATACCCCAAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2822.0040220000000
...................................................................................TTTTACCACAAATCTAATATACCCCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.5030210000000
.....................................................................................TTACCACAAATCTAATATACCCCAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2731.0030200000100
.................................................................................................................TCA-TT----TTGAGTATCGGGTATAAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.901800000001800
......................................................GATTCCTTCTGGACGTTACACACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.851701700000000
..............................................TCGGAAACGATTCCTTCTGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.801600160000000
.............................................GTCGGAAACGATTCCTTCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.701401400000000
...........TGCTGATCAAGAATA----TATATACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.651300130000000
....................................................................................TTTACCACAAATCTAATATACCCCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010100000000
.............CTGATCAAGAATA----TATATACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080800000000
......................................TTATGGGGTCGGAAACGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.4080800000000
.....................................................................................TTACCACAAATCTAATATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.3570700000000
.................................................................................................................TCA-TT----TTGAGTATCGGGTATAAAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.3570420000010
......................................................................................TACCACAAATCTAATATACCCCAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310100000000
...........................................................CTTCTGGACGTTACACACATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060600000000
.......................................TATGGGGTCGGAAACGATTCCTTCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.3060600000000
........................................................................................CCACAAATCTAATATACCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.3060400000200
....................................................................................TTTACCACAAATCTAATATACCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2550500000000
...............................................CGGAAACGATTCCTTCTGGACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040040000000
.....................................................................................TTACCACAAATCTAATATACCCCAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
..................................................................................................................CA-TT----TTGAGTATCGGGTATAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2040000000400
........................................................TTCCTTCTGGACGTTACACACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000300
..........................................................CCTTCTGGACGTTACACACATCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000300
.........................................................TCCTTCTGGACGTTACACACATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000020
.................TCAAGAATA----TATATACTTTATGGGGTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.1020200000000
..........ATGCTGATCAAGAATA----TATATACTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000020
........................TA----TATATACTTTATGGGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000002000
................................................................GGACGTTACACACATCCACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
.............................................................................................................AAACTCA-TT----TTGAGTATCGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810100000000
.........................................................TCCTTCTGGACGTTACACACATCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000100
........................................................................................CCACAAATCTAATATACCCCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
...........................................................................................................................TTGAGTATCGGGTATAAAAACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
....................................CTTTATGGGGTCGGAAACGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
TCGGCTATTGATGCTGATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
..........ATGCTGATCAAGAATA----TATATACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000001000
...................AAGAATA----TATATACTTTATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000001
...................................ACTTTATGGGGTCGGAAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000000000
..................................TACTTTATGGGGTCGGAAACGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.....................................TTTATGGGGTCGGAAACGATTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.................................ATACTTTATGGGGTCGGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000001000
.....................................................................................TTACCACAAATCTAATATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000010
....CTATTGATGCTGATCAAGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000001000
....................................CTTTATGGGGTCGGAAACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010000
......................................................GATTCCTTCTGGACGTTACACACATCCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0510100000000
droPer2
TCGGCTATTGATGCTGATCAAGAATA----TATATACTTTATG-GGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAATACTCA-TT----TTGAGTATCGGGTATAAAAATA---------------------------------------------AACAAA----TTTTATTTCTC----------------------------------------TGAGGA--------------TAGTT---TTCTGCTTCT----------------------------------------------GTTGC-----TGTCTG----------------CATATGATGCTGCCGCTGCTATTATTTTCGATG---------------------------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------TGT------------------------------------------TGC-CGA--------TGCGTTGTTGTCGATGCT---------------------GT-TTCTGTTTGCCGCTGCCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................GTCGGAAACGATTCCTTCTGGACGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.408080000
.......................................................ATTCCTTCTGGACGTTACAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153000030
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCT---------------------GT-TTCTGTTTGCC.......1990.111010000
...............................ATATACTTTATG-GGTCGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.071000010
droAna3
TCAGGAGGTGATCCTGATCAAGAATA----TATATACTTTAAAGGGTCGGAGATATATCCTTCACTGTGTTGCACACTT-------TTGACCACAATTATAATACCCTC------T-------GCA-----AGGGTATAAAAATA---------------------------------------------AAC----------------------------------------------------------TGCGGATCGATTTTGATAATTATTTTTT----------AC------------------------------------------------------------------------------------------------------------ACTGTTAAAATTGATC-----------AA------------------------------------------------------------------------------------------------------------T---------------GGTAGATTTTTG--------------------------------------AAATCAA--------------------------------------CATTTTCA-TTT--------CATATGGACATTGTAATT---------------------GGTATTTGTTTTTCATTGTTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................TATATACTTTAAAGGGTCGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.5010280000
........................TA----TATATACTTTAAAGGGTCGGAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.408170000
..............................TATATACTTTAAAGGGTCGGAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.306150000
.........................A----TATATACTTTAAAGGGTCGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.204040000
........................TA----TATATACTTTAAAGGGTCGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.153300000
........................TA----TATATACTTTAAAGGGTCGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
.....................GAATA----TATATACTTTAAAGGGTCGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102110000
...............................ATATACTTTAAAGGGTCGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
.....................................TTTAAAGGGTCGGAGATAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101001000
...........................................................................................CACAATTATAATACCCTC------T-------GCA-----AGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081010000
....................AGAATA----TATATACTTTAAAGGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.............................................................TCACTGTGTTGCACACTT-------TTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
...............................ATATACTTTAAAGGGTCGGAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.........................A----TATATACTTTAAAGGGTCGGAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
..........................................................CCTTCACTGTGTTGCACACTT-------TTGACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
.....................GAATA----TATATACTTTAAAGGGTCGGAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
...........TCCTGATCAAGAATA----TATATACTTTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051100000
.....................GAATA----TATATACTTTAAAGGGTCGGAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000
.........................A----TATATACTTTAAAGGGTCGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
...................AAGAATA----TATATACTTTAAAGGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
....................AGAATA----TATATACTTTAAAGGGTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
..............................TATATACTTTAAAGGGTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
..............................TATATACTTTAAAGGGTCGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
..............................TATATACTTTAAAGGGTCGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
...................AAGAATA----TATATACTTTAAAGGGTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
..............................................................CACTGTGTTGCACACTT-------TTGACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
droBip1
TCAGGAGGTGATCCTGATCAAGAATA----TATATATTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGGACAAAATTATAATACCCTCT-------------GCA-----AGGGTATAAAAATTGTAAGTATAAGTATA-AT-AAAT-------A--------------A----GTATATATAAT---A----------------------------------------------------------------------------------AT--------AAG--------TATATAATAGGTA-------------------------TATATAAT-CAACAA-TAATAGAAACA------------------------------G----------------------CCTAATGTGG-----------------C-----GAAATTT---------------------------TTACA--------------------------------TGAAATA------------------------------------------------------------------------------------------------------------------------------------------ATGCA---------------------GTTACATGGTAGCTATCGCTGSizeHit CountTotal NormTotal
No Reads
droKik1
TTGGCTGTTGATGCTGATCAAGAATA----TATATACTTTATAGGGTCGGAAAGGTCTCCTTCACTGCGTTGCAAACTT-------CTCACTGAAGTTATAATACCCTGCA--------------------AGGGTATAAAAATA---------------------------------------------G--------------------------------------------------------------------------------------------------------------------GGCAAACA--------TTTTAAATAGAT----------------CCTTTTA-AAGTTGAT--------------------------------A---------------------------------------------------------------------------------CTGCAACTG-------------------------------ACAATACA-----------------------------------------------------AAATCTGTCGCTCAACCTCTAATATTA--------------------------------------------------------------------TTTAGATG---------------------GC-----------AC-TTTAGSizeHit CountTotal NormTotal
No Reads
droFic1
TGAGATCGTGATGCTGATCAAGAATA----TATAAACTTTACGGGATCTGAGGTGTCTCCTTCATTGCGTTTCAAACTT-------CTGACCTAAATTATAATACTCTT-TGCTCT-------GCA-----AGGGTGTAAAAATATTTA-----------------TC-------A--------------A--------------------------------------------------------------------------------TATTTTTG----------CAAATGTAACGATTAA--------AATAT--TAGCCAGA----AGT----------------CACGTCAT-CGGTGA-TGATAAAAACG----------------------------------AAT----------------CCTGG----------------------------------------------------------------------------------------------------------------TGCATCTTCAATTTCC--------------------------------------AATTAGA--------------------------------------------------------------------T--------------------------------CCAGTTGGTTCTGGTGGSizeHit CountTotal NormTotal
No Reads
droEle1
TCGGCTATTTATCCTGTTCAAGAATA----TATATACTTTATAGGGTCGTAAACGCTTCCCTTTACCTGTTACATACTT-------TTCAACGATTACAATATACTTTTTTACTCT-------ACGAGTAACGGGTATAACTACA----------------TT-AATT-------A--------------A----TAATAGTTAAT---A----------------------------------------------------------------------------------ATATAAC------------------------------------------------------------------------------------------------------------C-------CTCTTACTTT-------------------------------------------------------------------------TTAGTTTCATTTTTATTCCGAAGAGTTTAAAA-TTGTAGTTTA---AGGGGTAACTT-------------------------------------------------------------------------------------------------TTA-AGC--------CACAATATTTTAATTTTG---------------------ATACTTTCGCGGTT-----ATSizeHit CountTotal NormTotal
No Reads
droRho1
TCGGCTAGTGATCCTGATCAAGAATA----TATATACTTTATAGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTT-------TTGCACGAATACAATATACCCTTTTACTCT-------ACGAGTAACGGGTATAAAAACA----------------TA-----------------------------C----------------------------------------------------------AACAAACG------------------------------------------------------------------------------------------------------------------------------------------------------------GTCATACATTT---------------TCTCTTTTTTCTGTAGACCAAATGAAACTTT-------------------------------------------------------------GTTATGAT---AGATAGCGTTT------TTA--------------------------------------T-------------------------------------------------------------------AAGCATATTTTGTCACTACACTTATG----------C---A----TCATTAGCTCTGSizeHit CountTotal NormTotal
No Reads
droBia1
TCGGCTAGAGATCCTAATCAAGAATA----TAAGTACTTTATGGGGTCGGAAATGCTTCCTTCTACCTGCTACATACTT-------TCCGACGAATCTAGTATACCCTTTTACTCT-------ATGAATACCGTTAAAAATTATA----------------TA------------AAAAATATAAAAACA--CC-------------------------------------------------------------AA--------------TGTTTTTT----------AATATATAAC------------------------------------------------------------------------------------------------------------CA----------------------CCTAGTATGC-----------------TTGG------------------------------------------------------------AAATAACATTTTTTAA---------------------T--------------------------------------TTCTAACATCT------------------------------------------TTTA-GTT--------CTGACAAC-----------------------------------------------TATATSizeHit CountTotal NormTotal
No Reads
droTak1
TCGGCTAGTGACCCTGATCAAGAATA----TATATACTTTATGGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTT-------TTGCACGAATCTAGTATACCCTTTTACTCT-------ACGAGTAACGGGTATAAAAACT----------------TA-A--------------------AATTG--CA-----------------AATTTT----------------AAATTATTTTGCAGACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTCACACAATTTACT--------------------------------TGAAGTGTTC-CCGACAATGTTAATTTGCCGACTAATTTAATCCACAAAAGTC------------------------------------------------------------------------------------------GTTGGGG---------------------ATTCTCTG---------GTGGSizeHit CountTotal NormTotal
No Reads
droEug1
TTCGCTATTGATCCTGATCAAGAATA----TATATACATTATAGGGTCGGAAACGCTTTCTTCTATCTGTTACATACAT-------TTTAACGAATCTAGTATATCCTTTTACTCT-------ACGAGTAACGGGTATAAAAATCTTAA-----------------TC-------A--------------A----A----------------------------------------------------------------------------ATC--------------AAAAAGTAAAGACAATACGGCTAATG--------TCGTA----AAT----------------AATGTTA-TAGTTGAC--------------------------------A--------------------------AATGTC----------CTCTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-ACC--------TTCATGAATAT---------------------------------------------TTTGSizeHit CountTotal NormTotal
No Reads
dm3
TTGGCTATTGACCCTGATCAAGAATA----TATATACTTTATACAGCCGGAAACGCTTCCTTATGCCTGTTACATACTT-------TTCAACGAATCTAGTATACCCTTTTACTCT-------ACGAGTAACGCGTTTAAAAATATCAG--------------------------------------------------------------------------------------------------------CAAAAC-------------------------------------------------------A--------TTGT--------AACACTTTGTTGAA--------------------------------------------------A--------------------------------------------------------GTGTG-----------------------A----------------------------------------------ATATGAATTA---TA----------------------------------TGAATA---TCGT-------------------------------------ATAAATTCAAAAA---ACATTTTCA-ATA--------TTCACAGAAAG-----------------------------------GTTTATGATGCCTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
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OSC		V145
S2		V146
S1		V147
1182-2H		V148
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.............................................................................TT-------TTCAACGAATCTAGTATACCCTTTTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................TACTT-------TTCAACGAATCTAGTATACCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010202000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGCCTGTTACATACTT-------TTCAACGAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TTACTCT-------ACGAGTAACGCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TCCTTATGCCTGTTACATACTT-------TT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTCCTTATGCCTGTTACATACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TCCTTATGCCTGTTACAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TATACCCTTTTACTCT-------ACGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TACTT-------TTCAACGAATCTAGTATACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TATTGACCCTGATCAAGAATA----T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTGACCCTGATCAAGAATA----TA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............CTGATCAAGAATA----TATATACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TACTT-------TTCAACGAATCTAGTATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGACCCTGATCAAGAATA----TAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...................................................AACGCTTCCTTATGCCTGTTACATACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATCAAGAATA----TATATACTTTATACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TTCAACGAATCTAGTATACCCTTTTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TT-------TTCAACGAATCTAGTATACCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GAAACGCTTCCTTATGCCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................TATGCCTGTTACATACTT-------TTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TATACCCTTTTACTCT-------ACGAGTAACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGCCTGTTACATACTT-------TTCAACGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GTTACATACTT-------TTCAACGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............................................................................................ATCTAGTATACCCTTTTACTCT-------ACGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGCCTGTTACATACTT-------TTCAACGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CTT-------TTCAACGAATCTAGTATACCCTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................TT-------TTCAACGAATCTAGTATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TTCAACGAATCTAGTATACCCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CCCTGATCAAGAATA----TAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................CCTGTTACATACTT-------TTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AAGAATA----TATATACTTTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TGTTACATACTT-------TTCAACGAATCTAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TTACATACTT-------TTCAACGAATCTAGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CCTGTTACATACTT-------TTCAACGAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TTCAACGAATCTAGTATACCCTTTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TACTT-------TTCAACGAATCTAGTATACCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TACATACTT-------TTCAACGAATCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
........................................................................................CAACGAATCTAGTATACCCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TACCCTTTTACTCT-------ACGAGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
droSim2
TCAGCTGCTGATTCTGATCAATAATA----TATATACTTTACATAGTCGAAAACGCTTCCTTCTGCCTGTTACATACTT-------TTCAACCAAT-TAGTATACCCTTTTACTCT-------ACGAGTAACGGGTAAAAGA----------------GACTAAA---GTCTACT------------------------------------AATATG----------------TACATATGTATCTGACCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATAAACAGAAGTTG-T--------------------------------CAAACCGTTCGCCAGCTGCGGCAGTTCCC--------------------------------------AAACAAA--------------------------------------TAT----------------------------------------------------------------------------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................ATATACTTTACATAGTCGAAAACGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2622.00400000040000000000
..................................TACTTTACATAGTCGAAAACGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.50300000010110000000
.......................................TACATAGTCGAAAACGCTTCCTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
TCAGCTGCTGATTCTGATCAATAATA----T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
...........................................................................................................TTTTACTCT-------ACGAGTAACGGGTAAAAGA----------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.......................ATA----TATATACTTTACATAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
........................TA----TATATACTTTACATAGTCGAAAACGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2921.00200000020000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAGAAGTTG-T--------------------------------CAAACCGTTCGCC...................................................................................................................................................................................2711.00100000010000000000
..............................TATATACTTTACATAGTCGAAAACGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000001000000000
................................TATACTTTACATAGTCGAAAACGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000001000000000
.......................................................................ACATACTT-------TTCAACCAAT-T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100000000001000000
...............................................................................................T-TAGTATACCCTTTTACTCT-------ACGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.20100000001000000000
...........................................................CTTCTGCCTGTTACATACTT-------TTCAACCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2950.20100000000010000000
...............................................CGAAAACGCTTCCTTCTGCCTGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17100000000000001000
.............................................................................................................TTACTCT-------ACGAGTAACGGGTAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.13100000010000000000
.......................................................................ACATACTT-------TTCAACCAAT-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.13100000000001000000
.........................................................TCCTTCTGCCTGTTACATACTT-------TTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.10200000020000000000
........................................................TTCCTTCTGCCTGTTACATACTT-------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000200000000
...................................................................................................................T-------ACGAGTAACGGGTAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18130.08100000000001000000
...........................................................CTTCTGCCTGTTACATACTT-------TTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
........................................................TTCCTTCTGCCTGTTACATACTT-------TTCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000000010000
........................................................................................................CCCTTTTACTCT-------ACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000010000000
...........................................................................................................TTTTACTCT-------ACGAGTAACGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
...........................................................CTTCTGCCTGTTACATACTT-------TTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000100000000
........................................................TTCCTTCTGCCTGTTACAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100000000100000000
..................................................................................................AGTATACCCTTTTACTCT-------ACGAGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
droSec2
TCAGCTGCTGATTCTGATCAATAATA----TATATACTTTATATAGTCGAAAACGCTTCCTTCTGCCTGTTACATACTT-------TTCAACCAAT-AAGTATACCCTTTTACTCT-------ACGAGTAACGGGTAAAAGA----------------GACTAAA---GTCTACT------------------------------------AATATG----------------TACATATGTATCTGACCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATAAACAGAAGTTG-T--------------------------------CAAACCGTTCGCCAGCTGCGGCAGTTCCC--------------------------------------AAACAAA--------------------------------------TAT----------------------------------------------------------------------------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TCGGCTATTGATCCTGATCAAGAATA----TATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACATACTT-------TTCAACGAATCTAGTATACCCTTTTACTCT-------ACGAGTAACGGGTATACAAATA---------------------------------------------AA--------TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGA-----------------TCGGATGAAACGTTTTTGTTTTATTGCATTT--------------------------------AAAAAAAA------------------ATAC-----------------------------------ACGT-----------------------------------------GGC-------GGACC----CTGTATATA--------CTTATAAATAT----------------------------------------------TTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................TA---------------------------------------------AA--------TTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGA-----------------TCGGATGAAACGTT...............................................................................................................................................................................................................................................................2611.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAA------------------ATAC-----------------------------------ACGT-----------------------------------------GGC-------GGACC----.............................................................................2420.50100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------AAAAAAAA------------------ATAC-----------------------------------ACGT-----------------------------------------GGC-------GGACC----C............................................................................2620.50100100000000
.....................................................................................................ATACCCTTTTACTCT-------ACGAGTAACGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.15303000000000
.................................ATACTTTATATGGTCGGAAACGCTTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.15303000000000
...............GATCAAGAATA----TATATACTTTATATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
............................................GGTCGGAAACGCTTCCTTCTGCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
droEre2
TCGGCTATTGATCCTGATAAAGATTATATGTATATACTTTATATGGTCGGAAACGTTTCCTTCTGCGTGTTACGTACTT-------TTTAACGAATCTAGCATACCCTTTTAGTCT-------ACGAGTATCGGGTATAATAATA----------------TTAT----------AAT-ATATAAAATTT--CA-------------------------------------------------------------AA---------------TGTT---TTCTTCTTAT----------------------------------------------AACGC-----TCAA--------------------------------------------------A--------------------------------------------------------GCATA-----------------------T----------------------------------------------TTATTAATTC---TA----------------------------------TAAATT---TTGT-----------TTCAAAAATATATGGATAGTGGTTAGTGGC-------------------------------------------------------------------------------------AG-TGGCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 03:01 AM