ID:

dwi_1946

 Coordinate:

scf2_1100000004729:2286145-2286204 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.4 -5.0 -4.9

Flybase annnotation

CDS [Dwil\GK12663-cds]; CDS [Dwil\GK12663-cds]; exon [dwil_GLEANR_12956:4]; exon [dwil_GLEANR_12956:5]; intron [Dwil\GK12663-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scf2_1100000003523:861-880 +
  2. scf2_1100000004511:5881644-5881663 +
  3. scf2_1100000004511:5972814-5972833 +
  4. scf2_1100000004511:6250799-6250818 +
  5. scf2_1100000004511:6602615-6602634 +
  6. scf2_1100000004511:6602948-6602967 +
  7. scf2_1100000004511:10111553-10111572 +
  8. scf2_1100000004521:7191344-7191363 +
  9. scf2_1100000004590:1030997-1031016 +
  10. scf2_1100000004590:1034000-1034019 +
  11. scf2_1100000004590:2090713-2090732 +
  12. dwi_1946  scf2_1100000004729:2286159-2286178 +
  13. scf2_1100000004762:3314710-3314729 +
  14. scf2_1100000004822:2266401-2266420 +
  15. scf2_1100000004822:2704285-2704304 +
  16. scf2_1100000004902:3769607-3769626 +
  17. scf2_1100000004902:11569524-11569543 +
  18. scf2_1100000004909:3993202-3993221 +
  19. scf2_1100000004909:4016824-4016843 +
  20. scf2_1100000004921:759578-759597 +
  21. scf2_1100000006737:21-40 +
  22. scf2_1100000004510:1483089-1483108 +
  23. scf2_1100000010101:497-516 +
  24. scf2_1100000000328:1776-1795 +
star

Sense Strand Reads

##################################################------------------------------------------------------------##################################################
TGCCAAAGCACAGTATACAAATTTTATACGGCAACAACGTCTGATTCCAGGTACCACAGAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAGCATCAACAACAGCACCAACAGCAGCAGCAGCAACAACGTTTAAGTCTTAAAAGACCGGCCAAGCAA
**************************************************..........((.((.((.......)).)).))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
 V119
head
 M020
head
 V117
male body
...............TACAAATTTTATACGGCAACAACGTC....................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................CAACAGCACCAACAGCAGCAGCAG.................................... 24 0 4 0.25 1 0 1 0 0 0
..............................................................................................................AACAGCAGCAGCAGCAACAAC............................. 21 0 20 0.10 2 0 2 0 0 0
................................................................CAGCAACAACAGCAGCAGCA............................................................................ 20 0 20 0.10 2 0 1 1 0 0
........................................................................................................AGCACCAACAGCAGCAGCAGCA.................................. 22 0 13 0.08 1 1 0 0 0 0
.......................................................................AACAGCAGCAGCAGCAGCAACAGC................................................................. 24 0 20 0.05 1 0 1 0 0 0
..................................................................................................................GCAGCAGCAGCAACAACG............................ 18 0 20 0.05 1 1 0 0 0 0
..................................................................GCAACAACAGCAGCAGCAGCAGC....................................................................... 23 0 20 0.05 1 0 0 0 1 0
...................................................................CAACAACAGCAGCAGCAGCAGCA...................................................................... 23 0 20 0.05 1 0 1 0 0 0
...............................................................GCAGCAACAACAGCAGCAGCA............................................................................ 21 0 20 0.05 1 0 1 0 0 0
.................................................................AGCAACAACAGCAGCAGCAGCAGCA...................................................................... 25 0 20 0.05 1 1 0 0 0 0
.................................................................................................................AGCAGCAGCAGCAACAACG............................ 19 0 20 0.05 1 1 0 0 0 0
.................................................................AGCAACAACAGCAGCAGCAGCAG........................................................................ 23 0 20 0.05 1 0 1 0 0 0
...........................................................AGCAGCAGCAACAACAGC................................................................................... 18 0 20 0.05 1 0 1 0 0 0
..............................................................................GCAGCAGCAGCAACAGCAT............................................................... 19 0 20 0.05 1 0 1 0 0 0
.....................................................................ACAACAGCAGCAGCAGCAG........................................................................ 19 0 20 0.05 1 0 1 0 0 0
..........................................................................................................CACCAACAGCAGCAGCAGCA.................................. 20 0 20 0.05 1 0 1 0 0 0
..............................................................................GCAGCAGCAGCAACAGCATC.............................................................. 20 0 20 0.05 1 0 1 0 0 0
...................................................................CAACAACAGCAGCAGCTGCAGCA...................................................................... 23 1 20 0.05 1 0 0 0 0 1
.........................................................................CAGCAGCAGCAGCAGCAACA................................................................... 20 0 20 0.05 1 0 0 1 0 0
.............................................................CAGCAGCAACAACAGCAGCAGCAGCA......................................................................... 26 0 20 0.05 1 1 0 0 0 0
................................................................CAGCAACAACAGCAGCAGCAGCAGCA...................................................................... 26 0 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

ACGGTTTCGTGTCATATGTTTAAAATATGCCGTTGTTGCAGACTAAGGTCCATGGTGTCTCGTCGTCGTTGTTGTCGTCGTCGTCGTCGTTGTCGTAGTTGTTGTCGTGGTTGTCGTCGTCGTCGTTGTTGCAAATTCAGAATTTTCTGGCCGGTTCGTT
**************************************************..........((.((.((.......)).)).))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M045
female body
 V118
embryo
....................................................................................................GTTGTCGTGGTTGTCGTCGTCGT..................................... 23 0 6 0.83 5 5 0
.....................................................................................................TTGTCGTGGTTGTCGTCGTCGTCGT.................................. 25 0 4 0.75 3 3 0
.......................................................................................................GTCGTGGTTGTCGTCGTCGTCGT.................................. 23 0 12 0.50 6 6 0
......................................................................................................TGTCGTGGTTGTCGTCGTCGTCGT.................................. 24 0 4 0.50 2 2 0
.........................................................................................................CGTGGTTGTCGTCGTCGTCGTTGT............................... 24 0 6 0.33 2 2 0
..........................................................................................................GTGGTTGTCGTCGTCGTCGTTGT............................... 23 0 13 0.31 4 4 0
....................................................................................................GTTGTCGTGGTTGTCGTCGTCGTCGT.................................. 26 0 4 0.25 1 1 0
..............................CGTCGTTCCAGACTTAGGTC.............................................................................................................. 20 3 4 0.25 1 1 0
........................................................................................................TCGTGGTTGTCGTCGTCGTCGTTGT............................... 25 0 6 0.17 1 1 0
.......................................................................................................GTCGTGGTTGTCGTCGTCGTCGTTGT............................... 26 0 6 0.17 1 1 0
........................................................................................................TCGTGGTTGTCGTCGTCGTCGT.................................. 22 0 13 0.15 2 2 0
.............................................................................................................GTTGTCGTCGTCGTCGTTGT............................... 20 0 20 0.15 3 3 0
............................................................................................TCGTAGTTGTTGTGGTGGT................................................. 19 1 20 0.15 3 0 3
..........................................................................................................GTGGTTGTCGTCGTCGTCGTTGTT.............................. 24 0 7 0.14 1 1 0
........................................................................................................................CGGTGTTGTTGCAAAGTCAGA................... 21 3 7 0.14 1 1 0
...........................................................................................................TGGTTGTCGTCGTCGTCGTTGT............................... 22 0 16 0.13 2 1 1
....................................................................................................GTTGTCGTGGTTGTCGTCGT........................................ 20 0 8 0.13 1 1 0
.............................CCGTCGTTGCTGACTAAG................................................................................................................. 18 2 10 0.10 1 1 0
...................................TAGCAGACTGAGGGCCAT........................................................................................................... 18 3 13 0.08 1 1 0
......................................................................................................GGTCGTGGTTGTCGTCGTCGTCGTTGT............................... 27 1 18 0.06 1 1 0
.................................................................................................................TGGTCGTTGTCGTTGTTGCAAACT....................... 24 3 18 0.06 1 1 0
...........................................................................................GTCGTAGTTGTTGTGGTGGT................................................. 20 1 19 0.05 1 0 1
...............................................................CGTCGTTGTTGTCGTCGT............................................................................... 18 0 20 0.05 1 1 0
..................................................................CGTTGTTGTCGTCGTCGTCGTCGT...................................................................... 24 0 20 0.05 1 1 0
............................................................................................................GGTTGTCGTCGTCGTCGTTGT............................... 21 0 20 0.05 1 1 0
......................................................................GTTTTCGTCGTCGTCGTCGTTGTCGT................................................................ 26 1 20 0.05 1 1 0
.......................................................................................................GTCGTGGTTGTCGTCGTCGT..................................... 20 0 20 0.05 1 0 1
..........................................................................................ACTCGTAGTTGTTGTGGTGGTT................................................ 22 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droWil2 scf2_1100000004729:2286095-2286254 + dwi_1946 TGCCAAAGCACAGT--ATAC-------AAAT-----TTTAT----------------------------------ACGGCAACAAC-GT------------CT------------G-----------------------ATT---CCAGG------------------TACCACA--G------AG---CAGCAG---------------CAACA-------------------ACAGCA---GC------AGCAGCAGCAA-C---AGC------AT---------------------------------CAA--------------CAACAGCACCAACAGCAGCA-----------GCAGCAAC--------------------------A---------AC-------------------------GTTTAAG-TCTTAAAAG--------------------------ACCGGCCA-----AGCAA
droVir3 scaffold_12970:1769882-1770048 + TGCTAAAGGCCAAA--A-AC-------AAAT-----TTT------------------------------------ACAAAAAT--CTAT------------CT------------T-----------------------TTT---GCAGGCA--TAAACTCAA-------------AACACAATAACAA------------------------CA------------A----CAACAAC---AAC------AACAACA----GC------------AACAGCAAC---------------------------AA--------------CAACAG---CA---A-----CAGCAAGAGCAACAG---C---------AACAAAAATG-----TT---------------------------------------TTATA-ACAAAATT-----------------CA-----------TAACAA---ACA-CA
droMoj3 scaffold_1708:887-1047 + CACCTGAACAAGGC--C-AC-------AAAT-----G-----CTA----------------GCAAA----------CAG-------------CAACAACAGCT---TCATAT-------------------------------------------------A------CTA------------CAGCAGCAGCAG---------------CAGCAGCA---GCA---G----CAGCAGC------------------AGCAG-C------------AA---------------------------------CTA---------CTACA--GCTG---CA--------------------------------GCAGCA--------------GCA---------GCA---GC---AGC---AGCAGCAGCCAATCAAG-TCAAAGAA-----------------GA-----------GGGCG-----AAGAA
droGri2 scaffold_15110:5813803-5813932 - TACCAAATCAAAATGAAAAC-------AA-----------------------------------------------CAA---CAGC-AA------------C-------------------------------------------------------------AG------------------CAACAA------------------CAGCAGCA------------G----CAGCAAC---AGCAGCAACAACA-------GC------AGCAACAACAG------------------------------CAG--------------CAACAGCAGCAGCAACAGCA-----------------------GCAGCA--------------ACA---------GCA---GC---AGC---AG---------------------------------------------------------------CAGCAA
dp5 2:6797230-6797387 + TGCAACAGCAAAAT--ATGC-------AGCA-----------------------------------GCAACATCTGCAACAGCAAC-AT------------CT------------GC----------------------------AGCAG------------------------------------CAACAGCAG------AAGCAGCAGCAACA-------------------GAAGCA---GC------AGCAACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGCAGCA------A-----CAACAGAAGCAGCAGCAAC---AGCAGCA--------------GCA---------GAA---GC---AGC---CG---------------------------------------------------------------CAGCAG
droPer2 scaffold_5:2590885-2591038 + AATGCGCA----GT--CATC-------AAAT-----TATGTTTGAACAGCACGACCGCCAAGCCAG----------GAG-------------CAA-------------------------------------------------------------------CAA------------------TAGCAA------------------CAGCAACA------------G----CAGCAGC---AAC---------A-------AC------AGCAGCAACAGCAACA---ACAACAGCAGCAGCAGCA----------------------------------------------------------ACAAC---AGCTAC-------GTGCAACA---------ACA---AC---TAC---AA---------------------------------------------------------------CAACAA
droAna3 scaffold_13417:1441977-1442137 - TATCGAATAATGAT--AAAC-------AAAT-TAATTATAT----ACG------CCTAAAAAA-------------CAG----------------GAACAGCA-------------------------------------------------------------TTAAAACC------------ATC------------------------AACA---------------TGCAACATCAGCAGCAGCAG-------------CAACATAAACAACAAACG------------------------------------------CCACA--GCAG---C--------------------------------AGCAGCA--------------GCA---------GCA---GC---AGC---AA----------------------------CGGCACAGAAGAAAT----------CGG-------CGAGAA
droBip1 scf7180000396640:1106591-1106731 + GCCCAA-GCACGAA--A-AC-------AAAAATAATCATAC------------------------------------AA-------------------------------------AATCAAATG--------------ATA---CTCAA------------------TGCCAGC--------CACCAG------------------CAGCAACA------------G----CAGCAGC---AAC---------A-------GC------AACAGCAACAGCAGCA---A---------------------CAG--------------CAACAG------CAGCAGCA-----------------ACAAC---AGCA--------------------------ACA---CTCCCAA---------------------------------------------------------------------CCG--C
droKik1 scf7180000302274:86854-86996 - CACAGCATCAGCAC----AA-----TCT-----------------------------------------------GCAGCAACAGC-AT------------CA------------GAGTCAAACGCAACTACAGCAACA---CAA----------------TCAG------------------CAACAG----------------------------------------------CAGC---AGC------AACA-------GC------AACATCAGCAGCAGCA---A---------------------CAG--------------CAACAA------CAGCAGCA-----------------------GCAGCA--------------ACA---------AAT---GT---TGC---AG---------------------------------------------------------------CAGCAG
droFic1 scf7180000453912:76693-76853 + TGCCCAAGCACTAC--CAG----------GA-----------------------------------------------G----------------CAAT-------------------------------------------------------TGTACGCCCAG------------------CAGCAA------------------CAGCTACA------------G----CAGCAGT---TGC---------A-------AC------AACAGCAACAGCAATT---ACACCAGCAACAGCAGCAA---CAA--------------CAGCAA---CA----------------------------------------------------------------ACA---GC---AGC---AG----------------------CAACATCGCCACAAAAACGACCTGCAAACGCCGGGCA-----GTGAA
droEle1 scf7180000491023:598165-598329 - TTGCAAAGCAACAA--GTT---------------------------------------------------------------------------------------CATCAT-------------------------------------------------TCAG------------------CAACAA------------------CAGCAGCA------------G----CAAAAAC---AAC---------A-------AC------AGCAGCAACAGCAGCA---GCAGCAGCAGCAGCA--------------------------------------A-----CA---------------ACAAC---TGTCAC-------CCACGAAGGTAACGGTAAAA---CC---GAC---AATGGTCGCCATGCAAGAGATGAAGAA--------------------------AACAACCA-----AACAA
droRho1 scf7180000777033:247267-247434 + CACCAAGAGTCTGC--ACAGAGTGCCCATGA----CCAGG------------------------------------CAG-------------CAACATCCACTGCCCACCAG-------------------------------------------------C------CACCA---AGTG---------CAGCAG---------------CAACAA----------------CAACATCAGCAGC------------AGCAG-CAACATC------------------------------------------ATCTCCAG--------CAGCAG---CA---A-----CACCAGATGCAGCAT---C---------ATCAGATGCA-----CCA---------TCA---G-----AC----------------------------------------------TG-----------CGCCT-----AGAAA
droBia1 scf7180000302187:1110860-1111016 + CAGAGCG---TGCT--GTAC-------GAGT----------------------------------------------------CCC-TGCAGCAGCATCCGCTGG----------------------------------------CCAAG------------------TACCACCAGACG---------CAGCAC---------------CAGCA-------------------CCAGCA---GC------AGCATCACCAG-C---AGC------AT---------------------------------CAG--------------CAGCAGCATCAGCAGCACCA-----GA--------------------CG--------------------------ACG---ACCAC----------------GACCACG-ACGACGATG--------------------------GACGGACA-----GACAA
droTak1 scf7180000415380:98868-99018 + TAACAGGGCAGGCC----AA-------AGAA----TCGTAGACGGGCGACATGGTT-----------------------------------------------------------------------------------------GTGGGTAAAGAGATGCACAG------------------CAGCAG------------------CAGCATCA------------G----CAGTAGC---AAC---------A-------GC------AACAGCAACAGCAGCA---ACATCAGCATCAGCATCA----------------------------------------------------------GCAAC---AGCC--------------GCC---------TAG---GT---G-------------------------------------------------------------AGCTA-----GACAA
droEug1 scf7180000409524:879518-879652 + AGCACAGTCAT-----ACAC-------AACT-----------------------------------------------G----------------CA------------------GCAACA---------------------AAA----------------TCAG------------------CAACAG------------------CAGCAGCA---GCAGCATCATCAA-CAACAACAGCAGCAGCAG-------------CAACAGC------------------------------------------AGCAACAGCAGCAGCA--GCAA---C--------------------------------AGCAGCA--------------GCA---------GCA---GC---AGCAACAG---------------------------------------------------------------CAA--C
dm3 chrUextra:6464750-6464914 - TGCTCAAGCAG---------------------------------------------------------------------------------CAGCATCTGCATTC-CCTAATCAACAACA-------------------------------------------------------GATG---------CAGCAGCAGCAA------CAGATGCA------GCAGCAGCAA-CAGATG-------------------------C------------AACAGCAACAAATGCATCAGCAGCAGCAGATGCAATA-----------------GCAA---CA--------------AATGCAGCAGCAAC---AACAATT--------------TCA---------AAT---GC---AAC---AG--------------------------------------------------------C-AA---CAG-CA
droSim2 2r:14662003-14662158 + TGGCAGC--AGGAA--C----------AGCAGCA--------------------------------AAAAC-TCTACGGAAATCCC-AT------------CC------------ACAGCATA---------------------------------------------TACGACA--G-G---CAGCAA------------------CATCGACA-------------------ACGGCAGCAGCAGCAG-------------CAACATG------AGCAGCAGCA---A---------------------CAG--------------CAACAGCAGCAGAAACACCA-----------------------A---CA--------------GCA---------GCAACTCG---AAC---AG---------------------------------------------------------------CAGCAA
droSec2 scaffold_0:9549792-9549950 - TGCCAACATGCAA------C-------AAAACCAG--ACACGCGGGCAACGTG------------------------------------------------CT---GACTAG-------------------------------------------------A------CGC------------TGACAGCAGCAG---------------CAGCAGCA---------G----CAGCAGC---AGC------------AGCAG-C------------AGCAGTTGCA------A------------------CTG--------------CAACAG------CAA-----CAG---------------CAA-------A--------------------------ATG---GCAAC----------------AAACAAG-TGGCAGATG--------------------------CACGGCCAAAGCCAGCGA
droYak3 X:7766869-7767028 + CAACAATAATCAGT--ACACAATCAATAAAA----TTATACCAGAACAACGCGGCAGA------------------CAG----------------CGGC-------------------------------------------------------TGCATGTACAG------------------CAGCAA------------------CATCTGCA------------A----CAGCAGC---AGC---------A-------TC------ATCCGCAACAGCAGCA---ACATCAGCGGCAGCAGCA----------------------------------------------------------ACA---TCAGGA--------------GCA---------GCA---GC---ATC---AG---------------------------------------------------------------CAGCAA
droEre2 scaffold_4690:5954331-5954477 + TGCAGGCACAGCAG----AA-----ACAGTA----TCAG-------------------------------------GAG------A-AG------CA------------------AAAGCTAAT-------------------------------------GCTG------------------CAGCAA------------------CAGCAGCA---GCAACAGCAGCAG-CAACAACAGCAGC----------------------------TGCAGCAGCAGCA---ACAACAG---------------CAG---------CTACA--GCAG---C--------------------------------AGCAACA--------------ACA---------GCA---GC---TGCAGCAG---------------------------------------------------------------CAG--C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droWil2
TGCCAAAGCACAGT--ATAC-------AAAT-----TTTAT----------------------------------ACGGCAACAAC-GT------------CT------------G-----------------------ATT---CCAGG------------------TACCACA--G------AG---CAGCAG---------------CAACA-------------------ACAGCA---GC------AGCAGCAGCAA-C---AGC------AT---------------------------------CAA--------------CAACAGCACCAACAGCAGCA-----------GCAGCAAC--------------------------A---------AC-------------------------GTTTAAG-TCTTAAAAG--------------------------ACCGGCCA-----AGCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................TAC-------AAAT-----TTTAT----------------------------------ACGGCAACAAC-GT------------C.....................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
........................................................................................................................................................................................................................................................................................................................................CAACAGCACCAACAGCAGCA-----------GCAG................................................................................................................................2440.25100010
..................................................................................................................................................................................................................................................................................................................................................AACAGCAGCA-----------GCAGCAAC--------------------------A---------AC-------------------------.............................................................21200.10200020
................................................................................................................................................................................................CAG---------------CAACA-------------------ACAGCA---GC------AGCA............................................................................................................................................................................................................................................20200.10200011
............................................................................................................................................................................................................................................................................................................................................AGCACCAACAGCAGCA-----------GCAGCA..............................................................................................................................22130.08101000
......................................................................................................................................................................................................................A-------------------ACAGCA---GC------AGCAGCAGCAA-C---AGC------.......................................................................................................................................................................................................................24200.05100010
......................................................................................................................................................................................................................................................................................................................................................GCAGCA-----------GCAGCAAC--------------------------A---------AC-------------------------G............................................................18200.05101000
..................................................................................................................................................................................................G---------------CAACA-------------------ACAGCA---GC------AGCAGCAGC.......................................................................................................................................................................................................................................23200.05110000
..................................................................................................................................................................................................................CAACA-------------------ACAGCA---GC------AGCAGCAGCA......................................................................................................................................................................................................................................23200.05100010
...............................................................................................................................................................................................GCAG---------------CAACA-------------------ACAGCA---GC------AGCA............................................................................................................................................................................................................................................21200.05100010
.................................................................................................................................................................................................AG---------------CAACA-------------------ACAGCA---GC------AGCAGCAGCA......................................................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................................................................................................................................................................................................................AGCAGCA-----------GCAGCAAC--------------------------A---------AC-------------------------G............................................................19200.05101000
.................................................................................................................................................................................................AG---------------CAACA-------------------ACAGCA---GC------AGCAGCAG........................................................................................................................................................................................................................................23200.05100010
........................................................................................................................................................................................AG---CAGCAG---------------CAACA-------------------ACAGC............................................................................................................................................................................................................................................................18200.05100010
...................................................................................................................................................................................................................................................GC------AGCAGCAGCAA-C---AGC------AT---------------------------------....................................................................................................................................................................................19200.05100010
....................................................................................................................................................................................................................ACA-------------------ACAGCA---GC------AGCAGCAG........................................................................................................................................................................................................................................19200.05100010
..............................................................................................................................................................................................................................................................................................................................................CACCAACAGCAGCA-----------GCAGCA..............................................................................................................................20200.05100010
...................................................................................................................................................................................................................................................GC------AGCAGCAGCAA-C---AGC------AT---------------------------------C...................................................................................................................................................................................20200.05100010
...........................................................................................................................................................................................................................................CAGCA---GC------AGCAGCAGCAA-C---A...............................................................................................................................................................................................................................20200.05100001
.............................................................................................................................................................................................CAGCAG---------------CAACA-------------------ACAGCA---GC------AGCAGCA.........................................................................................................................................................................................................................................26200.05101000
................................................................................................................................................................................................CAG---------------CAACA-------------------ACAGCA---GC------AGCAGCAGCA......................................................................................................................................................................................................................................26200.05100010
droVir3
TGCTAAAGGCCAAA--A-AC-------AAAT-----TTT------------------------------------ACAAAAAT--CTAT------------CT------------T-----------------------TTT---GCAGGCA--TAAACTCAA-------------AACACAATAACAA------------------------CA------------A----CAACAAC---AAC------AACAACA----GC------------AACAGCAAC---------------------------AA--------------CAACAG---CA---A-----CAGCAAGAGCAACAG---C---------AACAAAAATG-----TT---------------------------------------TTATA-ACAAAATT-----------------CA-----------TAACAA---ACA-CASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................CAGCAAGAGCAACAG---C---------AACAA..............................................................................................................2140.502000000000000000000000000000000000200000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ACAG---CA---A-----CAGCAAGAGCAACAG---C---------...................................................................................................................2330.331000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................AATAACAA------------------------CA------------A----CAACAAC---AAC------AACAACA----.....................................................................................................................................................................................................................................28200.153003000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GCAAC---------------------------AA--------------CAACAG---CA---A-----CAGC...........................................................................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CAACAG---CA---A-----CAGCAAGAGC.....................................................................................................................................19150.071000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................CACAATAACAA------------------------CA------------A----CAACAAC---AAC------AAC.............................................................................................................................................................................................................................................27150.071000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AACAG---CA---A-----CAGCAAGAGC.....................................................................................................................................18180.061000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACA----GC------------AACAGCAAC---------------------------AA--------------CAACAG---CA---.....................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................A------------A----CAACAAC---AAC------AACAACA----GC------------A......................................................................................................................................................................................................................22200.051000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AC---AAC------AACAACA----GC------------AACAGCAA...............................................................................................................................................................................................................22200.051000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACA----GC------------AACAGCAAC---------------------------AA--------------CAACA..............................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................C---AAC------AACAACA----GC------------AACAGCAAC---------------------------AA--------------...................................................................................................................................................................24200.051000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................CA------------A----CAACAAC---AAC------AACAACA----GC------------A......................................................................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................C------AACAACA----GC------------AACAGCAAC---------------------------A..................................................................................................................................................................................20200.051000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GCAAC---------------------------AA--------------CAACAG---CA---A-----CAGCA..........................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................ACAGCAAC---------------------------AA--------------CAACAG---CA---A-----CA.............................................................................................................................................21200.051000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AACAGCAAC---------------------------AA--------------CAACAG---CA---A-----CA.............................................................................................................................................22200.051000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................C------AACAACA----GC------------AACAGCAAC---------------------------AA--------------CAACAG---C.........................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................ACAATAACAA------------------------CA------------A----CAACAAC---.........................................................................................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CAAC---------------------------AA--------------CAACAG---CA---A-----CAGC...........................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AAC---AAC------AACAACA----GC------------AACAGCAA...............................................................................................................................................................................................................23200.051000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ACAACA----GC------------AACAGCAAC---------------------------A..................................................................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................AAC---AAC------AACAACA----GC------------AACAGC.................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACA----GC------------AACAGCAAC---------------------------AA--------------CAACAG---C.........................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................C---AAC------AACAACA----GC------------AACAGCAAC---------------------------...................................................................................................................................................................................22200.051000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AACAACA----GC------------AACAGCAAC---------------------------AA--------------...................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACA----GC------------AACAGCAAC---------------------------AA--------------CAACAG---CA---A-----CA.............................................................................................................................................27200.051000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AACAGCAAC---------------------------AA--------------CAACAG---CA---A-----C..............................................................................................................................................21200.051000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................A----CAACAAC---AAC------AACAACA----GC------------AACAGCA................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AACAGCAAC---------------------------AA--------------CAACAG---CA---A-----...............................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................GCAAC---------------------------AA--------------CAACAG---CA---A-----CA.............................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AAC------AACAACA----GC------------AACAGCAA...............................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CACCTGAACAAGGC--C-AC-------AAAT-----G-----CTA----------------GCAAA----------CAG-------------CAACAACAGCT---TCATAT-------------------------------------------------A------CTA------------CAGCAGCAGCAG---------------CAGCAGCA---GCA---G----CAGCAGC------------------AGCAG-C------------AA---------------------------------CTA---------CTACA--GCTG---CA--------------------------------GCAGCA--------------GCA---------GCA---GC---AGC---AGCAGCAGCCAATCAAG-TCAAAGAA-----------------GA-----------GGGCG-----AAGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................GCAAA----------CAG-------------CAACAACAGCT---TCA..............................................................................................................................................................................................................................................................................................................................................................................................2220.501100000
.............................................................GCAAA----------CAG-------------CAACAACAGCT---TCATAT-------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................2520.501100000
...........................................................................................................................................................................................AGCAGCAG---------------CAGCAGCA---GCA---G----C..................................................................................................................................................................................................................................................................21200.204400000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAG-TCAAAGAA-----------------GA-----------GGGCG-----.....2160.171100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................G-TCAAAGAA-----------------GA-----------GGGCG-----AAG..1960.171100000
CACCTGAACAAGGC--C-AC-------AAAT-----G-----C................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.171100000
...............................................................................................................T-------------------------------------------------A------CTA------------CAGCAGCAGCAG---------------CAG......................................................................................................................................................................................................................................................................................20200.102200000
....................................................................................................................................................................................................................................................................................................................................................................................CAGCA--------------GCA---------GCA---GC---AGC---AGCAG..................................................................21200.102000020
...................................................................................................................................................................................................................................G----CAGCAGC------------------AGCAG-C------------AA---------------------------------CT..................................................................................................................................................................................18200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................A--------------GCA---------GCA---GC---AGC---AGCAGCAGCCA............................................................23200.051000100
...............................................................................................................T-------------------------------------------------A------CTA------------CAGCAGCAGCAG---------------CAGC.....................................................................................................................................................................................................................................................................................21200.051100000
...............................................................................................................T-------------------------------------------------A------CTA------------CAGCAGCAGCAG---------------TC.......................................................................................................................................................................................................................................................................................19200.051000001
.........................................................................................................................................................................TA------------CAGCAGCAGCAG---------------CAGCAGCA---G.............................................................................................................................................................................................................................................................................23200.051100000
droGri2
TACCAAATCAAAATGAAAAC-------AA-----------------------------------------------CAA---CAGC-AA------------C-------------------------------------------------------------AG------------------CAACAA------------------CAGCAGCA------------G----CAGCAAC---AGCAGCAACAACA-------GC------AGCAACAACAG------------------------------CAG--------------CAACAGCAGCAGCAACAGCA-----------------------GCAGCA--------------ACA---------GCA---GC---AGC---AG---------------------------------------------------------------CAGCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................C-------------------------------------------------------------AG------------------CAACAA------------------CAGCAGCA------------G----C..................................................................................................................................................................................................................................................................19200.10220
...................................................................................................................................................................................................................................................GCAGCAACAACA-------GC------AGCAAC.......................................................................................................................................................................................................................20200.05110
......................................................................................................................................................................................................................................................................GC------AGCAACAACAG------------------------------CAG--------------CAACAGCA...........................................................................................................................................................24200.05110
dp5
TGCAACAGCAAAAT--ATGC-------AGCA-----------------------------------GCAACATCTGCAACAGCAAC-AT------------CT------------GC----------------------------AGCAG------------------------------------CAACAGCAG------AAGCAGCAGCAACA-------------------GAAGCA---GC------AGCAACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGCAGCA------A-----CAACAGAAGCAGCAGCAAC---AGCAGCA--------------GCA---------GAA---GC---AGC---CG---------------------------------------------------------------CAGCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA--------------GCA---------GAA---GC---AGC---CG---------------------------------------------------------------CAG...2311.0010010000000
..............................................................................................................................................................................................................................................................................................................................................CA------A-----CAACAGAAGCAGCAGC...............................................................................................................................1970.1410010000000
...................................................................................................................GC----------------------------AGCAG------------------------------------CAACAGCAG------AAG...............................................................................................................................................................................................................................................................................................19170.0610100000000
...............................................................................................................................................................................................................................................................ACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGC...............................................................................................................................................................20200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................CAGCAAC---AGCAGCA--------------GCA---------G.......................................................................................18200.0510100000000
...............................................................................................................................................................................................................................................A---GC------AGCAACAGCAG-C---AGC------AA---------------------------------CAG--------------C..................................................................................................................................................................24200.0510010000000
...........................................................................................................................................................................................................................................................AGCAACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGCAGC............................................................................................................................................................27200.0510000000001
...................................................................................................................................................................................................................................................GC------AGCAACAGCAG-C---AGC------AA---------------------------------CA..................................................................................................................................................................................21200.0510000100000
..............................................................................................................................................................................................................................................................AACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGCA..............................................................................................................................................................22200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAAC---AGCAGCA--------------GCA---------........................................................................................21200.0510000010000
............................................................................................................................................................................................................................................................GCAACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGCAGC............................................................................................................................................................26200.0510000000001
...................................................................................................................................................................................................................................................GC------AGCAACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGCA..............................................................................................................................................................27200.0510100000000
...................................................................................................................................................................................................................................................GC------AGCAACAGCAG-C---AGC------AA---------------------------------CAG--------------C..................................................................................................................................................................23200.0510010000000
....................................................................................................................................................................................................................................................C------AGCAACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGCA..............................................................................................................................................................26200.0510001000000
.....................................................................................................................................................................................................................................................................G-C---AGC------AA---------------------------------CAG--------------CAGCAGCA------A-----CA.............................................................................................................................................21200.0510000100000
.............................................................................................................................................................................................................................................GCA---GC------AGCAACAGCAG-C---AGC------A......................................................................................................................................................................................................................21200.0510000010000
...........................................................................................................................................................................................................................................................AGCAACAGCAG-C---AGC------AA---------------------------------CAG--------------CAGC...............................................................................................................................................................24200.0510000000001
droPer2
AATGCGCA----GT--CATC-------AAAT-----TATGTTTGAACAGCACGACCGCCAAGCCAG----------GAG-------------CAA-------------------------------------------------------------------CAA------------------TAGCAA------------------CAGCAACA------------G----CAGCAGC---AAC---------A-------AC------AGCAGCAACAGCAACA---ACAACAGCAGCAGCAGCA----------------------------------------------------------ACAAC---AGCTAC-------GTGCAACA---------ACA---AC---TAC---AA---------------------------------------------------------------CAACAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................GCAGCAACAGCAACA---ACAACAGCA.................................................................................................................................................................................................24170.061010000
......................................................................................................................................................................................................................................................................................CAGCAACA---ACAACAGCAGC...............................................................................................................................................................................................19200.051100000
..........................................................................................................................................................................................................................................................................................AACA---ACAACAGCAGCAGCAGCA----------------------------------------------------------..............................................................................................................................22200.051000100
........................................................................................................................................................................................AGCAA------------------CAGCAACA------------G----CAGC...............................................................................................................................................................................................................................................................18200.051010000
..............................................................................................................................................................................................................................................C---AAC---------A-------AC------AGCAGCAACAGCA................................................................................................................................................................................................................20200.051010000
..........................................................................................................................................................................................................................................................................................AACA---ACAACAGCAGCAGCAG..........................................................................................................................................................................................20200.051001000
..........................................................................................................................................................................................CAA------------------CAGCAACA------------G----CAGCAGC---A........................................................................................................................................................................................................................................................20200.051010000
droAna3
TATCGAATAATGAT--AAAC-------AAAT-TAATTATAT----ACG------CCTAAAAAA-------------CAG----------------GAACAGCA-------------------------------------------------------------TTAAAACC------------ATC------------------------AACA---------------TGCAACATCAGCAGCAGCAG-------------CAACATAAACAACAAACG------------------------------------------CCACA--GCAG---C--------------------------------AGCAGCA--------------GCA---------GCA---GC---AGC---AA----------------------------CGGCACAGAAGAAAT----------CGG-------CGAGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................TGCAACATCAGCAGCAGC...................................................................................................................................................................................................................................................18110.091010000
.......................................................................................................................................................................................................................................GCAACATCAGCAGCAGCAG-------------CAACA...............................................................................................................................................................................................................................24110.091000100
.......................................................................................................................................................................................................................................GCAACATCAGCAGCAGCAG-------------CA..................................................................................................................................................................................................................................21200.051000010
droBip1
GCCCAA-GCACGAA--A-AC-------AAAAATAATCATAC------------------------------------AA-------------------------------------AATCAAATG--------------ATA---CTCAA------------------TGCCAGC--------CACCAG------------------CAGCAACA------------G----CAGCAGC---AAC---------A-------GC------AACAGCAACAGCAGCA---A---------------------CAG--------------CAACAG------CAGCAGCA-----------------ACAAC---AGCA--------------------------ACA---CTCCCAA---------------------------------------------------------------------CCG--CSizeHit CountTotal NormTotal
No Reads
droKik1
CACAGCATCAGCAC----AA-----TCT-----------------------------------------------GCAGCAACAGC-AT------------CA------------GAGTCAAACGCAACTACAGCAACA---CAA----------------TCAG------------------CAACAG----------------------------------------------CAGC---AGC------AACA-------GC------AACATCAGCAGCAGCA---A---------------------CAG--------------CAACAA------CAGCAGCA-----------------------GCAGCA--------------ACA---------AAT---GT---TGC---AG---------------------------------------------------------------CAGCAGSizeHit CountTotal NormTotal
No Reads
droFic1
TGCCCAAGCACTAC--CAG----------GA-----------------------------------------------G----------------CAAT-------------------------------------------------------TGTACGCCCAG------------------CAGCAA------------------CAGCTACA------------G----CAGCAGT---TGC---------A-------AC------AACAGCAACAGCAATT---ACACCAGCAACAGCAGCAA---CAA--------------CAGCAA---CA----------------------------------------------------------------ACA---GC---AGC---AG----------------------CAACATCGCCACAAAAACGACCTGCAAACGCCGGGCA-----GTGAASizeHit CountTotal NormTotal
No Reads
droEle1
TTGCAAAGCAACAA--GTT---------------------------------------------------------------------------------------CATCAT-------------------------------------------------TCAG------------------CAACAA------------------CAGCAGCA------------G----CAAAAAC---AAC---------A-------AC------AGCAGCAACAGCAGCA---GCAGCAGCAGCAGCA--------------------------------------A-----CA---------------ACAAC---TGTCAC-------CCACGAAGGTAACGGTAAAA---CC---GAC---AATGGTCGCCATGCAAGAGATGAAGAA--------------------------AACAACCA-----AACAASizeHit CountTotal NormTotal
No Reads
droRho1
CACCAAGAGTCTGC--ACAGAGTGCCCATGA----CCAGG------------------------------------CAG-------------CAACATCCACTGCCCACCAG-------------------------------------------------C------CACCA---AGTG---------CAGCAG---------------CAACAA----------------CAACATCAGCAGC------------AGCAG-CAACATC------------------------------------------ATCTCCAG--------CAGCAG---CA---A-----CACCAGATGCAGCAT---C---------ATCAGATGCA-----CCA---------TCA---G-----AC----------------------------------------------TG-----------CGCCT-----AGAAASizeHit CountTotal NormTotal
No Reads
droBia1
CAGAGCG---TGCT--GTAC-------GAGT----------------------------------------------------CCC-TGCAGCAGCATCCGCTGG----------------------------------------CCAAG------------------TACCACCAGACG---------CAGCAC---------------CAGCA-------------------CCAGCA---GC------AGCATCACCAG-C---AGC------AT---------------------------------CAG--------------CAGCAGCATCAGCAGCACCA-----GA--------------------CG--------------------------ACG---ACCAC----------------GACCACG-ACGACGATG--------------------------GACGGACA-----GACAASizeHit CountTotal NormTotal
No Reads
droTak1
TAACAGGGCAGGCC----AA-------AGAA----TCGTAGACGGGCGACATGGTT-----------------------------------------------------------------------------------------GTGGGTAAAGAGATGCACAG------------------CAGCAG------------------CAGCATCA------------G----CAGTAGC---AAC---------A-------GC------AACAGCAACAGCAGCA---ACATCAGCATCAGCATCA----------------------------------------------------------GCAAC---AGCC--------------GCC---------TAG---GT---G-------------------------------------------------------------AGCTA-----GACAASizeHit CountTotal NormTotal
No Reads
droEug1
AGCACAGTCAT-----ACAC-------AACT-----------------------------------------------G----------------CA------------------GCAACA---------------------AAA----------------TCAG------------------CAACAG------------------CAGCAGCA---GCAGCATCATCAA-CAACAACAGCAGCAGCAG-------------CAACAGC------------------------------------------AGCAACAGCAGCAGCA--GCAA---C--------------------------------AGCAGCA--------------GCA---------GCA---GC---AGCAACAG---------------------------------------------------------------CAA--CSizeHit CountTotal NormTotal
No Reads
dm3
TGCTCAAGCAG---------------------------------------------------------------------------------CAGCATCTGCATTC-CCTAATCAACAACA-------------------------------------------------------GATG---------CAGCAGCAGCAA------CAGATGCA------GCAGCAGCAA-CAGATG-------------------------C------------AACAGCAACAAATGCATCAGCAGCAGCAGATGCAATA-----------------GCAA---CA--------------AATGCAGCAGCAAC---AACAATT--------------TCA---------AAT---GC---AAC---AG--------------------------------------------------------C-AA---CAG-CASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................CAGCAA------CAGATGCA------GCA...........................................................................................................................................................................................................................................................................1781.251000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................AGATG-------------------------C------------AACAGCAACAAATGCATC.....................................................................................................................................................................................................2441.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AA-CAGATG-------------------------C------------AACAGCAAC..............................................................................................................................................................................................................1860.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CAGCAGCAA-CAGATG-------------------------C------------AACAGCAACAA............................................................................................................................................................................................................2740.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................GCAA-CAGATG-------------------------C------------AACAGCAACAA............................................................................................................................................................................................................2240.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCAGCAGCAGATGCAATA-----------------GCAA---C.........................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................GCAGCAA-CAGATG-------------------------C------------AACA...................................................................................................................................................................................................................1860.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AGCAGCAA-CAGATG-------------------------C------------AACAGC.................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................A-----------------GCAA---CA--------------AATGCAGCAGCAAC---AAC......................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................TC-CCTAATCAACAACA-------------------------------------------------------GATG---------C.............................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................ATCAACAACA-------------------------------------------------------GATG---------CAGCA.........................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................CAACAACA-------------------------------------------------------GATG---------CAGCAGCAG.....................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCAACAACA-------------------------------------------------------GATG---------CAGCAGCAGCAA------T...........................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CCTAATCAACAACA-------------------------------------------------------GATG---------CAGCAGCA......................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...TCAAGCAG---------------------------------------------------------------------------------CAGCATCTGCAT...................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AATCAACAACA-------------------------------------------------------GATG---------CAGCAGC.......................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
................................................................................................................TCAACAACA-------------------------------------------------------GATG---------CAGCAGCAGCAA------............................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TCAACAACA-------------------------------------------------------GATG---------CAGCAGCAGCAA------CAGA........................................................................................................................................................................................................................................................................................2930.3310000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGCAG---------------------------------------------------------------------------------CAGCATCTGCATTC-CCTAAT..........................................................................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................C-CCTAATCAACAACA-------------------------------------------------------GATG---------CAGCAGC.......................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........G---------------------------------------------------------------------------------CAGCATCTGCATTC-CCTAATCAACAACA-------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................2930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ATG---------CAGCAGCAGCAA------CAGA........................................................................................................................................................................................................................................................................................19100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................ATGCA------GCAGCAGCAA-CAGA...............................................................................................................................................................................................................................................................19100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AA------CAGATGCA------GCAGCAGCAA-C..................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AACA-------------------------------------------------------GATG---------CAGCAGCAGCAA------C...........................................................................................................................................................................................................................................................................................2170.2920000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GCAGCAA------CAGATGCA------GCAGCAG.......................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................AGCAA------CAGATGCA------GCAGCAGCAA-CAGA...............................................................................................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................CAGCAACAAATGCATCAGCAGC...............................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GCAAC---AACAATT--------------TCA---------AAT---G.................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................AACAGCAACAAATGCATCAG...................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................AGCAA------CAGATGCA------GCAGCAGC......................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AAATGCATCAGCAGCAGCAGA.........................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TT--------------TCA---------AAT---GC---AAC---AG--------------------------------------------------------C-AA---CAG-C.2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GATGCA------GCAGCAGCAA-CAGATG-------------------------C------------AACA...................................................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................ATGCA------GCAGCAGCAA-CAGATG-------------------------C------------A......................................................................................................................................................................................................................2390.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................ATG---------CAGCAGCAGCAA------CAGATGCA------..............................................................................................................................................................................................................................................................................2390.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AACAACA-------------------------------------------------------GATG---------CAGCAGC.......................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AACAACA-------------------------------------------------------GATG---------CAGCAGCG......................................................................................................................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................................................................................................................................................................................................................................................................AAATGCATCAGCAGCAGC............................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................CA-------------------------------------------------------GATG---------CAGCAGCAGCAA------CAGATGCA------GC............................................................................................................................................................................................................................................................................2850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................GCAA------CAGATGCA------GCAGCA........................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................A--------------AATGCAGCAGCAAC---AACA.....................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................AA------CAGATGCA------GCAGCAGCA.....................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................AACA-------------------------------------------------------GATG---------CAGCAGCAGCAA------CAGATGC.....................................................................................................................................................................................................................................................................................2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................AACA-------------------------------------------------------GATG---------CAGCAGCAGCA...................................................................................................................................................................................................................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GCAGCAGCAA------CAGATGCA------GCA...........................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AA------CAGATGCA------GCAGCAGCAA-CAGATG-------------------------C------------.......................................................................................................................................................................................................................2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................AGCAGCAA------CAGATGCA------GCA...........................................................................................................................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GCAGCAA------CAGATGCA------GCA...........................................................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GATGCA------GCAGCAGCAA-CA.................................................................................................................................................................................................................................................................18170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GATG---------CAGCAGCAGCAA------CA..........................................................................................................................................................................................................................................................................................18170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GATGCA------GCAGCAGCAA-CAGATG-------------------------C------------A......................................................................................................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GATG---------CAGCAGCAGCAA------CAGATGCA------..............................................................................................................................................................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................A-------------------------------------------------------GATG---------CAGCAGCAGCAA------C...........................................................................................................................................................................................................................................................................................18170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AGATGCA------GCAGCAGCAA-C..................................................................................................................................................................................................................................................................18170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGGCAGC--AGGAA--C----------AGCAGCA--------------------------------AAAAC-TCTACGGAAATCCC-AT------------CC------------ACAGCATA---------------------------------------------TACGACA--G-G---CAGCAA------------------CATCGACA-------------------ACGGCAGCAGCAGCAG-------------CAACATG------AGCAGCAGCA---A---------------------CAG--------------CAACAGCAGCAGAAACACCA-----------------------A---CA--------------GCA---------GCAACTCG---AAC---AG---------------------------------------------------------------CAGCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................AGCAG-------------CAACATG------AGCAG..................................................................................................................................................................................................................17100.10100000000001000000
..........................................................................................................................................................................................................................................ACGGCAGCAGCAGCA..................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
TGCCAACATGCAA------C-------AAAACCAG--ACACGCGGGCAACGTG------------------------------------------------CT---GACTAG-------------------------------------------------A------CGC------------TGACAGCAGCAG---------------CAGCAGCA---------G----CAGCAGC---AGC------------AGCAG-C------------AGCAGTTGCA------A------------------CTG--------------CAACAG------CAA-----CAG---------------CAA-------A--------------------------ATG---GCAAC----------------AAACAAG-TGGCAGATG--------------------------CACGGCCAAAGCCAGCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................CAGCAG---------------CAGCAGCA---------G----CAGCAG.............................................................................................................................................................................................................................................................21200.0511000
........................................................................................................................................................................................................................................CAGCAGC---AGC------------AGCAG-C------------AGCAGT.................................................................................................................................................................................................................22200.0510010
droYak3
CAACAATAATCAGT--ACACAATCAATAAAA----TTATACCAGAACAACGCGGCAGA------------------CAG----------------CGGC-------------------------------------------------------TGCATGTACAG------------------CAGCAA------------------CATCTGCA------------A----CAGCAGC---AGC---------A-------TC------ATCCGCAACAGCAGCA---ACATCAGCGGCAGCAGCA----------------------------------------------------------ACA---TCAGGA--------------GCA---------GCA---GC---ATC---AG---------------------------------------------------------------CAGCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................GA------------------CAG----------------CGGC-------------------------------------------------------TGCATGTACAG------------------CA..................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......AATCAGT--ACACAATCAATAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
....................................TATACCAGAACAACGCGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................CA---TCAGGA--------------GCA---------GCA---GC---ATC---AG---------------------------------------------------------------CA....2311.00100000010000
..............................................CAACGCGGCAGA------------------CAG----------------CGGC-------------------------------------------------------TGCATGTACAG------------------C...................................................................................................................................................................................................................................................................................................................3111.00100000000001
...............................................................................................................................................................................................................................................................................................................................................................................A---TCAGGA--------------GCA---------GCA---GC---ATC---AG---------------------------------------------------------------C.....2111.00100000010000
..........................................................................................................................................................................................................................................................................................................GCAGCAGCA----------------------------------------------------------ACA---TCAGGA--------------GCA---------........................................................................................2140.50201000010000
...............................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------------ACA---TCAGGA--------------GCA---------GCA---GC---.............................................................................2140.25100000010000
..........................................................................................................................................................................................................................................................................................................GCAGCAGCA----------------------------------------------------------ACA---TCAGGA--------------GCA---------G.......................................................................................2240.25101000000000
................................................................................................................................................................................................................................................................................................................GCA----------------------------------------------------------ACA---TCAGGA--------------GCA---------GCA---GC---.............................................................................2040.25100010000000
...........................................................................................................................................................................................AA------------------CATCTGCA------------A----CAGCAGC---AGC---------.............................................................................................................................................................................................................................................2150.20100100000000
droEre2
TGCAGGCACAGCAG----AA-----ACAGTA----TCAG-------------------------------------GAG------A-AG------CA------------------AAAGCTAAT-------------------------------------GCTG------------------CAGCAA------------------CAGCAGCA---GCAACAGCAGCAG-CAACAACAGCAGC----------------------------TGCAGCAGCAGCA---ACAACAG---------------CAG---------CTACA--GCAG---C--------------------------------AGCAACA--------------ACA---------GCA---GC---TGCAGCAG---------------------------------------------------------------CAG--CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........AGCAG----AA-----ACAGTA----TCAG-------------------------------------GAG------A-AG------............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..........................................................................................................................................................................................................................................................................................AGCA---ACAACAG---------------CAG---------CTACA--GCA..............................................................................................................................................................2220.5010000100
.........................................................................................................................................................................................................................................................................................CAGCA---ACAACAG---------------CAG---------CTACA--GCAG---C--------------------------------A........................................................................................................................2620.5010000010
...............................................................................................................................................................................................................................AGCAGCAG-CAACAACAGC.........................................................................................................................................................................................................................................................18200.1530000030
........................................................................................................................................................................................................................................CAACAACAGCAGC----------------------------TGCAGCA...................................................................................................................................................................................................................2070.1410000100
....................................................................................................................................................................................................................................................................................................................................................................................CAACA--------------ACA---------GCA---GC---TGCAGCA......................................................................2070.1410000100
............................................................................................................................................................................................................................AACAGCAGCAG-CAACAACAGCA........................................................................................................................................................................................................................................................22200.1020000200
............................................................................................................................................................................................................................................AACAGCAGC----------------------------TGCAGCAGCA................................................................................................................................................................................................................19130.0810001000
........................................................................................................................................................................................................................................................................................................................................................................................A--------------ACA---------GCA---GC---TGCAGCAG---------------------------------------------------------------CA....19130.0810001000
....................................................................................................................................................................G------------------CAGCAA------------------CAGCAGCA---GCAACAGCAGCAG-C..................................................................................................................................................................................................................................................................29200.0510100000
..................................................................................................................................................................................................................................................................................GCAGCAGCAGCA---ACAACAG---------------CAG---------C.......................................................................................................................................................................23200.0510000100
..........................................................................................................................................................................................CAA------------------CAGCAGCA---GCAACAGC.........................................................................................................................................................................................................................................................................19200.0510100000
......................................................................................................................................................................................................................A---GCAACAGCAGCAG-CAACA..............................................................................................................................................................................................................................................................19200.0510001000
............................................................................................................................................................................................................................AACAGCAGCAG-CAACAACAGCAGC----------------------------..........................................................................................................................................................................................................................24200.0511000000

Generated: 05/18/2015 at 03:01 AM